F106890
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 120 | 63 | 240 | 258 |
Family's Representative Sequence
| Representative Sequence | 3300039110|Ga0400487_15940|Ga0400487_15940_397_1263 |
| Length | 288 |
| Sequence | LKAKPGNILEVNNFRILHSAFEILHSKPMPFHQTGSIKYFAFENLGDDALTHAIFTRQGGISPAPWDSLNFGGYIGDPLENTYLNRVRAFEAMGRKPESVYDVWQVHSADVICTDAPRPRSVQHKKADAILTDNPEITLFMRFADCVPILFFDPVKKVVGVAHAGWQGTVKKIVTATVEKMETVYGSRPADIRAGIGPSIAAHHYEVGTEVVQQVRTAFGDDADTLLPAQNGSAHFDLWEANRNLLEQAGVREIEVSGLCTYCHPRDWFSHRGEQGNTGRFGALIALK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 2 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 5 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 6 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 9 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 10 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 11 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 12 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 13 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 14 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 15 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 16 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 17 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 18 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 24 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 25 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 26 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 27 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 28 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 29 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 30 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 31 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 32 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 33 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 34 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 35 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 36 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 37 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 38 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 39 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 40 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 41 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 42 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 43 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 44 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 45 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 46 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 47 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 48 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 49 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 50 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 51 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 52 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 53 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 54 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 55 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 56 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 57 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 58 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 59 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 60 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 61 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 62 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 63 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.17 |
| Metatranscriptomes | 0.83 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0.83 |
| Rhizosphere | 96.67 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 35 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0400487_15940 | 3300039110 | Unclassified | 1369 |
| 2 | Ga0065704_10070377 | 3300005289 | Bacteria | 28140 |
| 3 | Ga0065704_10115929 | 3300005289 | Bacteria | 1863 |
| 4 | Ga0065707_10081987 | 3300005295 | Bacteria | 26103 |
| 5 | Ga0070707_100288369 | 3300005468 | Unclassified | 1595 |
| 6 | Ga0070698_100050908 | 3300005471 | Unclassified | 4219 |
| 7 | Ga0070699_100001469 | 3300005518 | Bacteria | 21556 |
| 8 | Ga0070704_100105364 | 3300005549 | Unclassified | 2134 |
| 9 | Ga0070704_100128875 | 3300005549 | Bacteria | 1957 |
| 10 | Ga0068859_100054961 | 3300005617 | Bacteria | 4006 |
| 11 | Ga0068862_100048496 | 3300005844 | Unclassified | 3626 |
| 12 | Ga0081539_10013995 | 3300005985 | Bacteria | 5980 |
| 13 | Ga0075428_100128094 | 3300006844 | Bacteria | 2762 |
| 14 | Ga0075431_100008481 | 3300006847 | Bacteria | 10293 |
| 15 | Ga0075434_100127218 | 3300006871 | Bacteria | 2565 |
| 16 | Ga0075429_100005207 | 3300006880 | Bacteria | 11184 |
| 17 | Ga0075429_100030537 | 3300006880 | Unclassified | 4682 |
| 18 | Ga0075429_100043235 | 3300006880 | Bacteria | 3920 |
| 19 | Ga0075436_100156130 | 3300006914 | Unclassified | 1607 |
| 20 | Ga0097620_100054960 | 3300006931 | Bacteria | 4006 |
| 21 | Ga0111539_10281505 | 3300009094 | Bacteria | 1935 |
| 22 | Ga0114129_10002036 | 3300009147 | Bacteria | 27722 |
| 23 | Ga0114129_10010730 | 3300009147 | Bacteria | 13061 |
| 24 | Ga0114129_10013560 | 3300009147 | Bacteria | 11613 |
| 25 | Ga0114129_10115319 | 3300009147 | Bacteria | 3703 |
| 26 | Ga0114129_10452790 | 3300009147 | Bacteria | 1683 |
| 27 | Ga0114129_11059099 | 3300009147 | Bacteria | 1018 |
| 28 | Ga0105243_10056335 | 3300009148 | Bacteria | 3125 |
| 29 | Ga0105239_10605983 | 3300010375 | Unclassified | 1249 |
| 30 | Ga0207670_10060583 | 3300025936 | Unclassified | 2579 |
| 31 | Ga0268265_10111737 | 3300028380 | Unclassified | 2232 |
| 32 | Ga0265323_10031661 | 3300028653 | Unclassified | 1965 |
| 33 | Ga0265340_10028745 | 3300031247 | Bacteria | 2795 |
| 34 | Ga0316578_10040349 | 3300031728 | Unclassified | 2699 |
| 35 | Ga0316578_10075336 | 3300031728 | Unclassified | 2002 |
| 36 | Ga0316578_10096264 | 3300031728 | Unclassified | 1772 |
| 37 | Ga0316577_10008213 | 3300031733 | Bacteria | 5589 |
| 38 | Ga0307406_10293762 | 3300031901 | Bacteria | 1245 |
| 39 | Ga0307415_100337374 | 3300032126 | Bacteria | 1264 |
| 40 | Ga0316593_10003557 | 3300032168 | Bacteria | 3887 |
| 41 | Ga0373961_0015643 | 3300035241 | Bacteria | 1944 |
| 42 | Ga0316574_0290883 | 3300035398 | Bacteria | 1040 |
| 43 | Ga0373933_0259292 | 3300035724 | Bacteria | 1121 |
| 44 | Ga0316582_0261821 | 3300036647 | Unclassified | 1186 |
| 45 | Ga0316584_0025891 | 3300036712 | Unclassified | 4305 |
| 46 | Ga0316584_0047499 | 3300036712 | Unclassified | 3207 |
| 47 | Ga0316584_0161280 | 3300036712 | Bacteria | 1666 |
| 48 | Ga0400490_55933 | 3300038726 | Unclassified | 1921 |
| 49 | Ga0400489_51469 | 3300039093 | Bacteria | 2419 |
| 50 | Ga0451577_0114214 | 3300042876 | Unclassified | 2417 |
| 51 | Ga0451577_0379871 | 3300042876 | Bacteria | 1282 |
| 52 | Ga0451577_0466204 | 3300042876 | Unclassified | 1147 |
| 53 | Ga0453683_0006582 | 3300044673 | Bacteria | 7962 |
| 54 | Ga0453683_0026785 | 3300044673 | Unclassified | 3660 |
| 55 | Ga0453683_0060039 | 3300044673 | Bacteria | 2377 |
| 56 | Ga0453684_0000021 | 3300044712 | Bacteria | 873490 |
| 57 | Ga0453684_0000055 | 3300044712 | Bacteria | 532014 |
| 58 | Ga0453684_0000720 | 3300044712 | Bacteria | 116865 |
| 59 | Ga0453684_0001833 | 3300044712 | Bacteria | 55557 |
| 60 | Ga0453684_0028870 | 3300044712 | Bacteria | 7895 |
| 61 | Ga0453684_0091599 | 3300044712 | Bacteria | 3752 |
| 62 | Ga0453684_0122123 | 3300044712 | Bacteria | 3143 |
| 63 | Ga0453684_0124455 | 3300044712 | Bacteria | 3106 |
| 64 | Ga0453684_0134951 | 3300044712 | Unclassified | 2957 |
| 65 | Ga0453684_0142577 | 3300044712 | Bacteria | 2859 |
| 66 | Ga0453684_0189853 | 3300044712 | Bacteria | 2404 |
| 67 | Ga0453684_0212464 | 3300044712 | Bacteria | 2248 |
| 68 | Ga0453684_0236359 | 3300044712 | Bacteria | 2106 |
| 69 | Ga0453684_0371437 | 3300044712 | Bacteria | 1608 |
| 70 | Ga0453684_0447683 | 3300044712 | Bacteria | 1438 |
| 71 | Ga0453684_0453552 | 3300044712 | Bacteria | 1427 |
| 72 | Ga0453684_0497653 | 3300044712 | Bacteria | 1350 |
| 73 | Ga0453684_0588834 | 3300044712 | Bacteria | 1221 |
| 74 | Ga0453684_0592779 | 3300044712 | Unclassified | 1216 |
| 75 | Ga0453684_0656198 | 3300044712 | Bacteria | 1144 |
| 76 | Ga0451576_0000009 | 3300045051 | Bacteria | 712666 |
| 77 | Ga0451576_0005416 | 3300045051 | Bacteria | 16025 |
| 78 | Ga0451576_0012761 | 3300045051 | Bacteria | 9429 |
| 79 | Ga0451576_0035354 | 3300045051 | Bacteria | 5301 |
| 80 | Ga0451576_0044823 | 3300045051 | Bacteria | 4660 |
| 81 | Ga0451576_0499922 | 3300045051 | Bacteria | 1277 |
| 82 | Ga0496108_0319787 | 3300048911 | Bacteria | 1353 |
| 83 | Ga0501040_0159380 | 3300049576 | Unclassified | 1595 |
| 84 | Ga0501042_0142681 | 3300049578 | Unclassified | 1727 |
| 85 | Ga0501071_0067516 | 3300049587 | Unclassified | 2601 |
| 86 | Ga0501071_0404254 | 3300049587 | Bacteria | 1043 |
| 87 | Ga0501072_0124345 | 3300049588 | Unclassified | 2055 |
| 88 | Ga0501072_0492652 | 3300049588 | Bacteria | 969 |
| 89 | Ga0501073_0004329 | 3300049589 | Bacteria | 10656 |
| 90 | Ga0501073_0060586 | 3300049589 | Bacteria | 2641 |
| 91 | Ga0501073_0092953 | 3300049589 | Bacteria | 2096 |
| 92 | Ga0501074_0256862 | 3300049590 | Unclassified | 1242 |
| 93 | Ga0501074_0408544 | 3300049590 | Unclassified | 963 |
| 94 | Ga0501075_0127442 | 3300049591 | Bacteria | 1938 |
| 95 | Ga0501076_0068058 | 3300049592 | Unclassified | 2844 |
| 96 | Ga0501076_0071569 | 3300049592 | Unclassified | 2774 |
| 97 | Ga0501077_0322556 | 3300049593 | Unclassified | 985 |
| 98 | Ga0501079_0275777 | 3300049741 | Unclassified | 1315 |
| 99 | Ga0501079_0298004 | 3300049741 | Unclassified | 1261 |
| 100 | Ga0501080_0528829 | 3300049742 | Bacteria | 1052 |
| 101 | Ga0501081_0054059 | 3300049743 | Unclassified | 2774 |
| 102 | Ga0501045_0098544 | 3300049824 | Bacteria | 2163 |
| 103 | Ga0501045_0239821 | 3300049824 | Bacteria | 1350 |
| 104 | nmdc:mga05p37_104974_c1 | 3300050507 | Bacteria | 3476 |
| 105 | nmdc:mga05p37_21263_c1 | 3300050507 | Bacteria | 7854 |
| 106 | nmdc:mga05p37_45394_c1 | 3300050507 | Bacteria | 5404 |
| 107 | nmdc:mga09592_166779_c1 | 3300050508 | Bacteria | 1904 |
| 108 | nmdc:mga09592_4331_c1 | 3300050508 | Bacteria | 11472 |
| 109 | nmdc:mga09592_461540_c1 | 3300050508 | Unclassified | 1095 |
| 110 | nmdc:mga09592_67324_c1 | 3300050508 | Bacteria | 3037 |
| 111 | nmdc:mga06r32_3145_c1 | 3300050510 | Bacteria | 14457 |
| 112 | nmdc:mga08y16_817559_c1 | 3300050511 | Unclassified | 923 |
| 113 | nmdc:mga08x19_141803_c1 | 3300050514 | Unclassified | 1623 |
| 114 | nmdc:mga0a205_24153_c1 | 3300050515 | Bacteria | 5773 |
| 115 | nmdc:mga0a205_294912_c1 | 3300050515 | Unclassified | 1495 |
| 116 | Ga0501084_0024453 | 3300054114 | Bacteria | 5039 |
| 117 | Ga0501084_0180281 | 3300054114 | Bacteria | 1783 |
| 118 | Ga0501084_0238941 | 3300054114 | Unclassified | 1533 |
| 119 | Ga0501082_0133834 | 3300060353 | Unclassified | 2151 |
| 120 | Ga0530510_0124603 | 3300061734 | Unclassified | 1893 |
| 121 | Ga0400487_15940 | |||
| 122 | Ga0065704_10070377 | |||
| 123 | Ga0065704_10115929 | |||
| 124 | Ga0065707_10081987 | |||
| 125 | Ga0070707_100288369 | |||
| 126 | Ga0070698_100050908 | |||
| 127 | Ga0070699_100001469 | |||
| 128 | Ga0070704_100105364 | |||
| 129 | Ga0070704_100128875 | |||
| 130 | Ga0068859_100054961 | |||
| 131 | Ga0068862_100048496 | |||
| 132 | Ga0081539_10013995 | |||
| 133 | Ga0075428_100128094 | |||
| 134 | Ga0075431_100008481 | |||
| 135 | Ga0075434_100127218 | |||
| 136 | Ga0075429_100005207 | |||
| 137 | Ga0075429_100030537 | |||
| 138 | Ga0075429_100043235 | |||
| 139 | Ga0075436_100156130 | |||
| 140 | Ga0097620_100054960 | |||
| 141 | Ga0111539_10281505 | |||
| 142 | Ga0114129_10002036 | |||
| 143 | Ga0114129_10010730 | |||
| 144 | Ga0114129_10013560 | |||
| 145 | Ga0114129_10115319 | |||
| 146 | Ga0114129_10452790 | |||
| 147 | Ga0114129_11059099 | |||
| 148 | Ga0105243_10056335 | |||
| 149 | Ga0105239_10605983 | |||
| 150 | Ga0207670_10060583 | |||
| 151 | Ga0268265_10111737 | |||
| 152 | Ga0265323_10031661 | |||
| 153 | Ga0265340_10028745 | |||
| 154 | Ga0316578_10040349 | |||
| 155 | Ga0316578_10075336 | |||
| 156 | Ga0316578_10096264 | |||
| 157 | Ga0316577_10008213 | |||
| 158 | Ga0307406_10293762 | |||
| 159 | Ga0307415_100337374 | |||
| 160 | Ga0316593_10003557 | |||
| 161 | Ga0373961_0015643 | |||
| 162 | Ga0316574_0290883 | |||
| 163 | Ga0373933_0259292 | |||
| 164 | Ga0316582_0261821 | |||
| 165 | Ga0316584_0025891 | |||
| 166 | Ga0316584_0047499 | |||
| 167 | Ga0316584_0161280 | |||
| 168 | Ga0400490_55933 | |||
| 169 | Ga0400489_51469 | |||
| 170 | Ga0451577_0114214 | |||
| 171 | Ga0451577_0379871 | |||
| 172 | Ga0451577_0466204 | |||
| 173 | Ga0453683_0006582 | |||
| 174 | Ga0453683_0026785 | |||
| 175 | Ga0453683_0060039 | |||
| 176 | Ga0453684_0000021 | |||
| 177 | Ga0453684_0000055 | |||
| 178 | Ga0453684_0000720 | |||
| 179 | Ga0453684_0001833 | |||
| 180 | Ga0453684_0028870 | |||
| 181 | Ga0453684_0091599 | |||
| 182 | Ga0453684_0122123 | |||
| 183 | Ga0453684_0124455 | |||
| 184 | Ga0453684_0134951 | |||
| 185 | Ga0453684_0142577 | |||
| 186 | Ga0453684_0189853 | |||
| 187 | Ga0453684_0212464 | |||
| 188 | Ga0453684_0236359 | |||
| 189 | Ga0453684_0371437 | |||
| 190 | Ga0453684_0447683 | |||
| 191 | Ga0453684_0453552 | |||
| 192 | Ga0453684_0497653 | |||
| 193 | Ga0453684_0588834 | |||
| 194 | Ga0453684_0592779 | |||
| 195 | Ga0453684_0656198 | |||
| 196 | Ga0451576_0000009 | |||
| 197 | Ga0451576_0005416 | |||
| 198 | Ga0451576_0012761 | |||
| 199 | Ga0451576_0035354 | |||
| 200 | Ga0451576_0044823 | |||
| 201 | Ga0451576_0499922 | |||
| 202 | Ga0496108_0319787 | |||
| 203 | Ga0501040_0159380 | |||
| 204 | Ga0501042_0142681 | |||
| 205 | Ga0501071_0067516 | |||
| 206 | Ga0501071_0404254 | |||
| 207 | Ga0501072_0124345 | |||
| 208 | Ga0501072_0492652 | |||
| 209 | Ga0501073_0004329 | |||
| 210 | Ga0501073_0060586 | |||
| 211 | Ga0501073_0092953 | |||
| 212 | Ga0501074_0256862 | |||
| 213 | Ga0501074_0408544 | |||
| 214 | Ga0501075_0127442 | |||
| 215 | Ga0501076_0068058 | |||
| 216 | Ga0501076_0071569 | |||
| 217 | Ga0501077_0322556 | |||
| 218 | Ga0501079_0275777 | |||
| 219 | Ga0501079_0298004 | |||
| 220 | Ga0501080_0528829 | |||
| 221 | Ga0501081_0054059 | |||
| 222 | Ga0501045_0098544 | |||
| 223 | Ga0501045_0239821 | |||
| 224 | nmdc:mga05p37_104974_c1 | |||
| 225 | nmdc:mga05p37_21263_c1 | |||
| 226 | nmdc:mga05p37_45394_c1 | |||
| 227 | nmdc:mga09592_166779_c1 | |||
| 228 | nmdc:mga09592_4331_c1 | |||
| 229 | nmdc:mga09592_461540_c1 | |||
| 230 | nmdc:mga09592_67324_c1 | |||
| 231 | nmdc:mga06r32_3145_c1 | |||
| 232 | nmdc:mga08y16_817559_c1 | |||
| 233 | nmdc:mga08x19_141803_c1 | |||
| 234 | nmdc:mga0a205_24153_c1 | |||
| 235 | nmdc:mga0a205_294912_c1 | |||
| 236 | Ga0501084_0024453 | |||
| 237 | Ga0501084_0180281 | |||
| 238 | Ga0501084_0238941 | |||
| 239 | Ga0501082_0133834 | |||
| 240 | Ga0530510_0124603 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1xfj-assembly1.cif.gz_A | crystal structure of protein cc_0490 from caulobacter crescentus, pfam duf152 | 0.9322 | 9 | 257 |
| 6dzd-assembly2.cif.gz_B | crystal structure of bacillus licheniformis hypothetical protein yfih | 0.9253 | 6 | 257 |
| 6t0y-assembly1.cif.gz_A | crystal structure of ylmd from geobacillus stearothermophilus | 0.9181 | 3 | 257 |
| 7f3v-assembly2.cif.gz_B | crystal structure of yfih with c107a mutation in complex with endogenous udp-murnac | 0.9156 | 9 | 257 |
| 1rw0-assembly1.cif.gz_B | crystal structure of protein yfih from salmonella enterica serovar typhi, pfam duf152 | 0.9123 | 6 | 257 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1xfjA00 | Alpha Beta;4-Layer Sandwich;CNF1/YfiH-like putative cysteine hydrolases;CNF1/YfiH-like putative cysteine hydrolases | 0.9234 | 9 | 257 | 3.60.140.10 |
| af_P9WKD5_9_250_3.60.140.10 | Alpha Beta;4-Layer Sandwich;CNF1/YfiH-like putative cysteine hydrolases;CNF1/YfiH-like putative cysteine hydrolases | 0.9229 | 5 | 257 | 3.60.140.10 |
| 1t8hA00 | Alpha Beta;4-Layer Sandwich;CNF1/YfiH-like putative cysteine hydrolases;CNF1/YfiH-like putative cysteine hydrolases | 0.9181 | 3 | 257 | 3.60.140.10 |
| 1t8hA00 | Alpha Beta;4-Layer Sandwich;CNF1/YfiH-like putative cysteine hydrolases;CNF1/YfiH-like putative cysteine hydrolases | 0.9079 | 3 | 257 | 3.60.140.10 |
| 1xfjA00 | Alpha Beta;4-Layer Sandwich;CNF1/YfiH-like putative cysteine hydrolases;CNF1/YfiH-like putative cysteine hydrolases | 0.9024 | 9 | 257 | 3.60.140.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-X0ZPB7-F1-model_v4 | Purine nucleoside phosphorylase | 0.9861 | 41 | 257 |
GO:0004000
GO:0005507 GO:0017061 GO:0046936 |
| AF-A0A644YJ36-F1-model_v4 | Polyphenol oxidase (EC 1.10.3.-) | 0.9845 | 1 | 257 |
GO:0004000
GO:0005507 GO:0016491 GO:0017061 GO:0046936 |
| AF-A0A350WTT2-F1-model_v4 | Purine nucleoside phosphorylase | 0.9835 | 1 | 257 |
GO:0004000
GO:0005507 GO:0017061 GO:0046936 |
| AF-A0A2N2N3D8-F1-model_v4 | Purine nucleoside phosphorylase | 0.9812 | 1 | 256 |
GO:0004000
GO:0005507 GO:0017061 GO:0046936 |
| AF-A0A644YJ36-F1-model_v4 | Polyphenol oxidase (EC 1.10.3.-) | 0.9807 | 1 | 257 |
GO:0004000
GO:0005507 GO:0016491 GO:0017061 GO:0046936 |