F103758

General Info

Members Datasets Scaffolds Average Seq Length
119 100 238 210

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2547132374|2548501658
Length 228
Sequence TFYLDFVSPYAWLAFERLPEALEGLSYSVAYQPVLLGALLQQHANPGPAGIAPKRAWTYRHVTWLGHAQGTPLQMPARHPFNPLPLLRQALACSDDGFINRFVAGTVLRHVWQGGQDALDAGRLGALAAALSEQVRPGQDANSEGPKALLRANTEAAQAAGVFGVPAFAVDDKLFWGLDGLPMLRAYLDGDAWFEGPDWEAVRQLPSGLSAKKLSGSRILKAGARVSP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
17 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
27 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
40 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
41 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
50 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
51 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
52 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
53 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
56 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
57 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
58 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
61 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
68 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
69 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
70 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
71 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
72 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
73 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
74 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
75 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
82 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
83 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
84 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
85 2547132374 Acidovorax radicis N35 Isolate Unclassified
86 2643221570 Acidovorax sp. Root568 Isolate Unclassified
87 2643221596 Acidovorax sp. Root70 Isolate Unclassified
88 2643221609 Acidovorax sp. Root217 Isolate Unclassified
89 2643221611 Acidovorax sp. Root219 Isolate Unclassified
90 2643221652 Acidovorax sp. Root402 Isolate Unclassified
91 2643221717 Acidovorax sp. Root267 Isolate Unclassified
92 2721755523 Delftia sp. HK171 Isolate Unclassified
93 2738543012 Acidovorax sp. CF301 Isolate Unclassified
94 2816332133 Acidovorax radicis 2721A Isolate Unclassified
95 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
96 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
97 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
98 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
99 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
100 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.55
Metatranscriptomes 0
Isolates 13.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.36
Nodule 2.52
Rhizoplane 0
Rhizosphere 72.27
Stem 0
Stem Tuber 0
Unclassified 2.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1507895 2162886007 Bacteria 1068
2 rootH1_10385830 3300003323 Bacteria 1318
3 Ga0070658_10092367 3300005327 Bacteria 2495
4 Ga0070658_10542979 3300005327 Bacteria 1006
5 Ga0068869_100164992 3300005334 Bacteria 1727
6 Ga0068869_100263990 3300005334 Bacteria 1379
7 Ga0070680_100030217 3300005336 Bacteria 4353
8 Ga0070680_100357718 3300005336 Bacteria 1242
9 Ga0068868_100029727 3300005338 Bacteria 4186
10 Ga0068868_100052353 3300005338 Bacteria 3214
11 Ga0070659_100175913 3300005366 Bacteria 1755
12 Ga0070681_10187405 3300005458 Bacteria 1989
13 Ga0070679_100032987 3300005530 Bacteria 5125
14 Ga0068855_100050177 3300005563 Bacteria 4918
15 Ga0068857_100566537 3300005577 Bacteria 1071
16 Ga0068859_101371948 3300005617 Unclassified 779
17 Ga0068863_100434923 3300005841 Bacteria 1286
18 Ga0075365_10243612 3300006038 Bacteria 1263
19 Ga0097620_101372185 3300006931 Unclassified 779
20 Ga0079104_1000058 3300006946 Bacteria 165039
21 Ga0105250_10008478 3300009092 Bacteria 4363
22 Ga0105240_10032636 3300009093 Bacteria 6740
23 Ga0105245_10025604 3300009098 Bacteria 5189
24 Ga0105243_10002121 3300009148 Bacteria 16784
25 Ga0105241_10125783 3300009174 Bacteria 2070
26 Ga0105242_10000242 3300009176 Bacteria 43023
27 Ga0105248_10058113 3300009177 Bacteria 4343
28 Ga0105237_10895742 3300009545 Bacteria 894
29 Ga0105249_10431507 3300009553 Bacteria 1353
30 Ga0157376_10000348 3300014969 Bacteria 30874
31 Ga0207696_1008147 3300025711 Bacteria 4040
32 Ga0207705_10251693 3300025909 Unclassified 1347
33 Ga0207654_10069617 3300025911 Bacteria 2085
34 Ga0207687_10023818 3300025927 Bacteria 4084
35 Ga0207690_10144915 3300025932 Bacteria 1755
36 Ga0207686_10004016 3300025934 Bacteria 7898
37 Ga0207709_10000160 3300025935 Bacteria 91486
38 Ga0207689_10047505 3300025942 Bacteria 3543
39 Ga0207667_10965266 3300025949 Bacteria 841
40 Ga0207677_10022956 3300026023 Bacteria 3844
41 Ga0207677_10032414 3300026023 Bacteria 3359
42 Ga0207641_11062765 3300026088 Bacteria 807
43 Ga0207674_10602685 3300026116 Bacteria 1061
44 Ga0209281_1000017 3300027111 Bacteria 583251
45 Ga0265330_10000052 3300031235 Bacteria 102771
46 Ga0265332_10000001 3300031238 Bacteria 863783
47 Ga0265320_10074208 3300031240 Bacteria 1597
48 Ga0265325_10011670 3300031241 Bacteria 5044
49 Ga0265340_10035183 3300031247 Bacteria 2488
50 Ga0265316_10039508 3300031344 Bacteria 3789
51 Ga0307513_10079099 3300031456 Bacteria 3398
52 Ga0307408_100000219 3300031548 Bacteria 61012
53 Ga0307408_100853955 3300031548 Bacteria 830
54 Ga0265314_10000013 3300031711 Bacteria 403405
55 Ga0265314_10003480 3300031711 Bacteria 15205
56 Ga0265314_10182403 3300031711 Bacteria 1256
57 Ga0265342_10038937 3300031712 Bacteria 2892
58 Ga0307406_10000407 3300031901 Bacteria 24935
59 Ga0307406_10849847 3300031901 Bacteria 774
60 Ga0395900_0227404 3300037418 Bacteria 1878
61 Ga0395898_0518888 3300037466 Bacteria 1133
62 Ga0395905_0000352 3300037471 Bacteria 65434
63 Ga0395905_0019032 3300037471 Bacteria 6512
64 Ga0395905_0169418 3300037471 Bacteria 2051
65 Ga0395905_0199747 3300037471 Bacteria 1875
66 Ga0395901_0515818 3300038443 Bacteria 1215
67 Ga0436361_0767394 3300039447 Bacteria 56110
68 Ga0451843_1700598 3300041509 Bacteria 996
69 Ga0439437_026382 3300042000 Bacteria 718
70 Ga0450912_003431 3300042116 Bacteria 1127
71 Ga0451577_0000303 3300042876 Bacteria 95840
72 Ga0466969_0007720 3300044656 Bacteria 5719
73 Ga0466965_0471806 3300044683 Bacteria 701
74 Ga0466966_0018343 3300044684 Bacteria 4616
75 Ga0466961_0004020 3300044693 Bacteria 9209
76 Ga0453684_0000947 3300044712 Bacteria 95768
77 Ga0466970_0032194 3300044765 Bacteria 2770
78 Ga0466959_0010454 3300045049 Bacteria 6638
79 Ga0451576_0001688 3300045051 Bacteria 36559
80 Ga0451576_0788444 3300045051 Bacteria 998
81 Ga0495642_0102036 3300046528 Bacteria 1222
82 Ga0495597_0003149 3300046542 Bacteria 9877
83 Ga0495633_0020284 3300046558 Bacteria 3345
84 Ga0496121_0009755 3300048924 Bacteria 10978
85 Ga0496122_0088269 3300048925 Bacteria 2126
86 Ga0496122_0103363 3300048925 Bacteria 1896
87 Ga0496123_0036272 3300048926 Bacteria 3499
88 Ga0496123_0061482 3300048926 Bacteria 2412
89 Ga0496123_0159607 3300048926 Bacteria 1204
90 Ga0496125_0001159 3300048928 Bacteria 39918
91 Ga0496125_0007440 3300048928 Bacteria 11649
92 Ga0496125_0057205 3300048928 Bacteria 3160
93 Ga0496125_0144787 3300048928 Bacteria 1645
94 Ga0496126_0039210 3300048929 Bacteria 4398
95 Ga0501034_0078452 3300049571 Bacteria 3307
96 Ga0501046_0333281 3300049580 Bacteria 1104
97 Ga0501047_0128895 3300049581 Bacteria 2410
98 Ga0501249_038689 3300049679 Bacteria 1078
99 Ga0501080_0476148 3300049742 Bacteria 1117
100 Ga0501266_003003 3300049763 Bacteria 2101
101 nmdc:mga03n38_326386_c1 3300050490 Bacteria 830
102 nmdc:mga0yw44_245952_c1 3300050492 Bacteria 1190
103 Ga0500586_120078 3300053145 Bacteria 915
104 2548501658 2547132374 Bacteria 5530232
105 2643865083 2643221570 Bacteria 5103772
106 2643990770 2643221596 Bacteria 5006805
107 2644059102 2643221609 Bacteria 6756331
108 2644075857 2643221611 Bacteria 6820941
109 2644292364 2643221652 Bacteria 5140275
110 2644645442 2643221717 Bacteria 5676132
111 2722881482 2721755523 Bacteria 6430384
112 2739245509 2738543012 Bacteria 7115078
113 2816472333 2816332133 Bacteria 7249298
114 2839141384 2839138175 Bacteria 6549354
115 2842721857 2842718218 Bacteria 4560148
116 2894027432 2894023352 Bacteria 5167372
117 2932426305 2932422444 Bacteria 4678430
118 2974322047 2974320154 Bacteria 4571377
119 2990710975 2990710928 Bacteria 5002431
120 SwRhRL2b_contig_1507895
121 rootH1_10385830
122 Ga0070658_10092367
123 Ga0070658_10542979
124 Ga0068869_100164992
125 Ga0068869_100263990
126 Ga0070680_100030217
127 Ga0070680_100357718
128 Ga0068868_100029727
129 Ga0068868_100052353
130 Ga0070659_100175913
131 Ga0070681_10187405
132 Ga0070679_100032987
133 Ga0068855_100050177
134 Ga0068857_100566537
135 Ga0068859_101371948
136 Ga0068863_100434923
137 Ga0075365_10243612
138 Ga0097620_101372185
139 Ga0079104_1000058
140 Ga0105250_10008478
141 Ga0105240_10032636
142 Ga0105245_10025604
143 Ga0105243_10002121
144 Ga0105241_10125783
145 Ga0105242_10000242
146 Ga0105248_10058113
147 Ga0105237_10895742
148 Ga0105249_10431507
149 Ga0157376_10000348
150 Ga0207696_1008147
151 Ga0207705_10251693
152 Ga0207654_10069617
153 Ga0207687_10023818
154 Ga0207690_10144915
155 Ga0207686_10004016
156 Ga0207709_10000160
157 Ga0207689_10047505
158 Ga0207667_10965266
159 Ga0207677_10022956
160 Ga0207677_10032414
161 Ga0207641_11062765
162 Ga0207674_10602685
163 Ga0209281_1000017
164 Ga0265330_10000052
165 Ga0265332_10000001
166 Ga0265320_10074208
167 Ga0265325_10011670
168 Ga0265340_10035183
169 Ga0265316_10039508
170 Ga0307513_10079099
171 Ga0307408_100000219
172 Ga0307408_100853955
173 Ga0265314_10000013
174 Ga0265314_10003480
175 Ga0265314_10182403
176 Ga0265342_10038937
177 Ga0307406_10000407
178 Ga0307406_10849847
179 Ga0395900_0227404
180 Ga0395898_0518888
181 Ga0395905_0000352
182 Ga0395905_0019032
183 Ga0395905_0169418
184 Ga0395905_0199747
185 Ga0395901_0515818
186 Ga0436361_0767394
187 Ga0451843_1700598
188 Ga0439437_026382
189 Ga0450912_003431
190 Ga0451577_0000303
191 Ga0466969_0007720
192 Ga0466965_0471806
193 Ga0466966_0018343
194 Ga0466961_0004020
195 Ga0453684_0000947
196 Ga0466970_0032194
197 Ga0466959_0010454
198 Ga0451576_0001688
199 Ga0451576_0788444
200 Ga0495642_0102036
201 Ga0495597_0003149
202 Ga0495633_0020284
203 Ga0496121_0009755
204 Ga0496122_0088269
205 Ga0496122_0103363
206 Ga0496123_0036272
207 Ga0496123_0061482
208 Ga0496123_0159607
209 Ga0496125_0001159
210 Ga0496125_0007440
211 Ga0496125_0057205
212 Ga0496125_0144787
213 Ga0496126_0039210
214 Ga0501034_0078452
215 Ga0501046_0333281
216 Ga0501047_0128895
217 Ga0501249_038689
218 Ga0501080_0476148
219 Ga0501266_003003
220 nmdc:mga03n38_326386_c1
221 nmdc:mga0yw44_245952_c1
222 Ga0500586_120078
223 2548501658
224 2643865083
225 2643990770
226 2644059102
227 2644075857
228 2644292364
229 2644645442
230 2722881482
231 2739245509
232 2816472333
233 2839141384
234 2842721857
235 2894027432
236 2932426305
237 2974322047
238 2990710975

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01323

DSBA

DSBA-like thioredoxin domain

1

189

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fz5-assembly2.cif.gz_D crystal structure of possible 2-hydroxychromene-2-carboxylate isomerase from rhodobacter sphaeroides 0.7717 3 190
3fz5-assembly2.cif.gz_D crystal structure of possible 2-hydroxychromene-2-carboxylate isomerase from rhodobacter sphaeroides 0.7606 3 190
1r4w-assembly2.cif.gz_D crystal structure of mitochondrial class kappa glutathione transferase 0.7501 2 190
2imd-assembly1.cif.gz_A structure of semet 2-hydroxychromene-2-carboxylate isomerase (hcca isomerase) 0.7422 3 202
2imd-assembly1.cif.gz_A structure of semet 2-hydroxychromene-2-carboxylate isomerase (hcca isomerase) 0.7292 3 202
ID Description Score Start End Superfamily
af_Q8I224_20_154_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8379 2 37 3.40.30.10
af_Q18973_4_212_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7797 1 186 3.40.30.10
af_Q09652_5_211_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7632 3 186 3.40.30.10
3fz5D00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7624 3 190 3.40.30.10
3fz5D00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.755 3 190 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A4Q3Q6F5-F1-model_v4 deleted 0.9879 1 135
AF-A0A4Q3Q6F5-F1-model_v4 deleted 0.9736 1 135
AF-A0A519ZFM6-F1-model_v4 2-hydroxychromene-2-carboxylate isomerase 0.9716 1 95 GO:0004364
GO:0004602
GO:0006749
GO:0016853
AF-A0A1V3RYU8-F1-model_v4 Disulfide bond formation protein DsbA 0.9577 1 75 GO:0016491
AF-A0A519ZFM6-F1-model_v4 2-hydroxychromene-2-carboxylate isomerase 0.9521 1 95 GO:0004364
GO:0004602
GO:0006749
GO:0016853

Map