F102301

General Info

Members Datasets Scaffolds Average Seq Length
119 85 109 233

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10017341|Ga0307405_100173413
Length 264
Sequence MWWSCRVDGMNDEVSRETADVAGASTPAARAPSAPPVARRVFGSERLPLAQRYADLLATEGVVRGLIGPREASRLWERHLLNCAVLGELVPEGATVCDIGSGAGLPGLVLAIARPDLRITLVEPLLRRTTFLEEVVAELALDDVEVVRGRAEALHGERRFDVVTSRAVAPLERLLGWSMPLVEPTGALVAMKGSSVHEEIAAAGPTLRRLGCASPSVTVLGVDLLESTTVALRVAWADPARVSWPLAVTPAKRPGARARRKRAR

Samples

Sample ID Description Type Environment
1 2643221561 Nocardioides sp. Root151 Isolate Unclassified
2 2643221576 Nocardioides sp. Root614 Isolate Unclassified
3 2643221590 Nocardioides sp. Root682 Isolate Unclassified
4 2643221615 Nocardioides sp. Root224 Isolate Unclassified
5 2643221641 Nocardioides sp. Root122 Isolate Unclassified
6 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
7 2643221696 Nocardioides sp. Root140 Isolate Unclassified
8 2739367898 Nocardioides sp. CF479 Isolate Unclassified
9 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
27 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
28 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
37 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
38 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
39 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
40 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
41 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
42 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
45 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
46 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
47 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
48 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
49 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
50 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
51 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
52 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
55 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
56 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
57 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
58 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
62 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
63 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
64 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
65 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
66 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
67 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
68 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
71 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
72 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
75 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
78 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
79 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
80 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
81 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
82 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
83 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
84 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
85 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.6
Metatranscriptomes 0
Isolates 8.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.61
Nodule 0.84
Rhizoplane 12.61
Rhizosphere 63.87
Stem 0
Stem Tuber 0
Unclassified 10.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10169842 3300003323 Bacteria 1433
2 Ga0070708_100438457 3300005445 Bacteria 1232
3 Ga0070663_100142945 3300005455 Bacteria 1828
4 Ga0068867_100308036 3300005459 Bacteria 1308
5 Ga0070698_100002421 3300005471 Bacteria 20553
6 Ga0070684_100730591 3300005535 Bacteria 924
7 Ga0081539_10085927 3300005985 Bacteria 1639
8 Ga0075365_10019981 3300006038 Bacteria 4145
9 Ga0075365_10091899 3300006038 Bacteria 2068
10 Ga0075365_10191062 3300006038 Bacteria 1433
11 Ga0075365_10640559 3300006038 Bacteria 751
12 Ga0075363_100075556 3300006048 Bacteria 1836
13 Ga0075363_100259704 3300006048 Bacteria 1002
14 Ga0075364_10173220 3300006051 Bacteria 1459
15 Ga0075367_10190178 3300006178 Bacteria 1281
16 Ga0075370_10046271 3300006353 Bacteria 2462
17 Ga0105243_10056103 3300009148 Bacteria 3131
18 Ga0157372_10507235 3300013307 Bacteria 1406
19 Ga0157372_10910346 3300013307 Bacteria 1020
20 Ga0157375_10183430 3300013308 Bacteria 2245
21 Ga0157380_10341232 3300014326 Bacteria 1397
22 Ga0157380_10571221 3300014326 Bacteria 1113
23 Ga0157377_10219997 3300014745 Bacteria 1215
24 Ga0163161_10071581 3300017792 Bacteria 2538
25 Ga0163161_10121178 3300017792 Bacteria 1966
26 Ga0163161_10157948 3300017792 Bacteria 1728
27 Ga0207643_10092844 3300025908 Bacteria 1761
28 Ga0207662_10515789 3300025918 Bacteria 824
29 Ga0207691_10207588 3300025940 Bacteria 1703
30 Ga0207679_10041062 3300025945 Bacteria 3315
31 Ga0207678_10152233 3300026067 Bacteria 1975
32 Ga0207708_10090727 3300026075 Bacteria 2356
33 Ga0207708_10186593 3300026075 Bacteria 1648
34 Ga0207648_10203138 3300026089 Bacteria 1758
35 Ga0207698_10291942 3300026142 Bacteria 1514
36 Ga0307405_10017341 3300031731 Bacteria 3949
37 Ga0307405_10342673 3300031731 Bacteria 1150
38 Ga0307413_10067694 3300031824 Bacteria 2234
39 Ga0307413_10276342 3300031824 Bacteria 1261
40 Ga0307410_10119350 3300031852 Bacteria 1921
41 Ga0307406_10078349 3300031901 Bacteria 2189
42 Ga0307407_10048789 3300031903 Bacteria 2412
43 Ga0307407_10102261 3300031903 Bacteria 1781
44 Ga0307407_10105425 3300031903 Bacteria 1759
45 Ga0307412_10080666 3300031911 Bacteria 2248
46 Ga0307412_10295506 3300031911 Bacteria 1278
47 Ga0307409_100001523 3300031995 Bacteria 11477
48 Ga0307416_100000317 3300032002 Bacteria 24951
49 Ga0307416_100749931 3300032002 Bacteria 1069
50 Ga0307414_10181398 3300032004 Bacteria 1694
51 Ga0307414_10213927 3300032004 Bacteria 1578
52 Ga0307415_100000352 3300032126 Bacteria 19736
53 Ga0307415_100383566 3300032126 Bacteria 1194
54 Ga0395901_0281476 3300038443 Bacteria 1728
55 Ga0242420_018282 3300038996 Bacteria 1234
56 Ga0451789_0773736 3300041443 Bacteria 868
57 Ga0451837_0763951 3300041494 Bacteria 1193
58 Ga0451853_0630152 3300041512 Bacteria 1391
59 Ga0466965_0270204 3300044683 Bacteria 916
60 Ga0466966_0262216 3300044684 Bacteria 1040
61 Ga0466961_0037808 3300044693 Bacteria 3096
62 Ga0466961_0131187 3300044693 Bacteria 1570
63 Ga0466963_0163822 3300044694 Bacteria 1548
64 Ga0466964_0005537 3300044706 Bacteria 4689
65 Ga0466970_0119872 3300044765 Bacteria 1441
66 Ga0466957_0029208 3300044842 Bacteria 3286
67 Ga0466960_0001267 3300044901 Bacteria 9146
68 Ga0466960_0021038 3300044901 Bacteria 2899
69 Ga0466960_0041639 3300044901 Bacteria 2177
70 Ga0466960_0070990 3300044901 Bacteria 1733
71 Ga0466960_0371091 3300044901 Bacteria 820
72 Ga0466958_0269437 3300045836 Bacteria 1091
73 Ga0466967_0074016 3300045976 Bacteria 3058
74 Ga0466967_0111071 3300045976 Bacteria 2518
75 Ga0466967_0135898 3300045976 Bacteria 2286
76 Ga0496100_0179877 3300048903 Bacteria 1529
77 Ga0496102_0157317 3300048905 Bacteria 2136
78 Ga0496103_0048646 3300048906 Bacteria 2621
79 Ga0496104_0571432 3300048907 Bacteria 1041
80 Ga0496106_0022971 3300048909 Bacteria 4632
81 Ga0496109_0249222 3300048912 Bacteria 1672
82 Ga0496109_0394705 3300048912 Bacteria 1307
83 Ga0496110_0117947 3300048913 Bacteria 2390
84 Ga0496110_0172686 3300048913 Bacteria 1961
85 Ga0496111_0130271 3300048914 Bacteria 1861
86 Ga0496112_0205829 3300048915 Bacteria 1926
87 Ga0496112_0368169 3300048915 Bacteria 1379
88 Ga0496113_0109961 3300048916 Bacteria 2144
89 Ga0496114_0342834 3300048917 Bacteria 1321
90 Ga0501033_0001990 3300049570 Bacteria 17817
91 Ga0501036_0033311 3300049572 Bacteria 4357
92 Ga0501036_0268709 3300049572 Bacteria 1428
93 Ga0501067_0038219 3300049583 Bacteria 2665
94 Ga0501069_0019909 3300049585 Bacteria 3631
95 Ga0501070_0074006 3300049586 Bacteria 2819
96 Ga0501070_0158707 3300049586 Bacteria 1865
97 Ga0501070_0187450 3300049586 Bacteria 1701
98 Ga0501070_0405351 3300049586 Bacteria 1102
99 Ga0501081_0137585 3300049743 Bacteria 1749
100 Ga0501212_034002 3300049851 Bacteria 829
101 nmdc:mga0yw44_29124_c1 3300050492 Bacteria 3185
102 nmdc:mga0yw44_462781_c1 3300050492 Bacteria 860
103 nmdc:mga0yw44_78845_c1 3300050492 Bacteria 2060
104 Ga0500556_0000699 3300053104 Bacteria 20597
105 Ga0500593_000024 3300053117 Bacteria 52015
106 Ga0500573_0007176 3300053140 Bacteria 6067
107 Ga0501084_0033265 3300054114 Bacteria 4313
108 Ga0530510_0168870 3300061734 Bacteria 1620
109 Ga0530510_0280311 3300061734 Bacteria 1245

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0268709 Ga0501036_0268709_389_1048 189
2 iso_pu_bacteria 2643221561 2643827131 193
3 iso_pu_bacteria 2643221576 2643891068 193
4 iso_pu_bacteria 2643221590 2643960124 193
5 iso_pu_bacteria 2643221696 2644534484 193
6 iso_pu_bacteria 2857481737 2857483717 193
7 3300006038 Ga0075365_10640559 Ga0075365_106405591 196
8 3300013307 Ga0157372_10910346 Ga0157372_109103462 196
9 3300014326 Ga0157380_10341232 Ga0157380_103412322 196
10 3300014326 Ga0157380_10571221 Ga0157380_105712212 196
11 3300017792 Ga0163161_10121178 Ga0163161_101211783 196
12 3300025908 Ga0207643_10092844 Ga0207643_100928442 196
13 3300025940 Ga0207691_10207588 Ga0207691_102075882 196
14 3300026089 Ga0207648_10203138 Ga0207648_102031383 196
15 3300031824 Ga0307413_10276342 Ga0307413_102763421 196
16 3300041443 Ga0451789_0773736 Ga0451789_0773736_62_703 196
17 3300041494 Ga0451837_0763951 Ga0451837_0763951_117_797 196
18 3300044901 Ga0466960_0371091 Ga0466960_0371091_94_792 196
19 3300045976 Ga0466967_0074016 Ga0466967_0074016_309_992 196
20 3300048905 Ga0496102_0157317 Ga0496102_0157317_616_1296 196
21 3300048906 Ga0496103_0048646 Ga0496103_0048646_379_1059 196
22 3300048907 Ga0496104_0571432 Ga0496104_0571432_353_1003 196
23 3300048909 Ga0496106_0022971 Ga0496106_0022971_3170_3850 196
24 3300048912 Ga0496109_0394705 Ga0496109_0394705_26_628 196
25 3300048913 Ga0496110_0172686 Ga0496110_0172686_473_1153 196
26 3300048914 Ga0496111_0130271 Ga0496111_0130271_971_1573 196
27 3300048915 Ga0496112_0205829 Ga0496112_0205829_185_865 196
28 3300048916 Ga0496113_0109961 Ga0496113_0109961_1122_1802 196
29 3300048917 Ga0496114_0342834 Ga0496114_0342834_383_985 196
30 3300049586 Ga0501070_0158707 Ga0501070_0158707_235_900 196
31 3300031903 Ga0307407_10102261 Ga0307407_101022612 197
32 iso_pu_bacteria 2739367898 2740165428 199
33 iso_pu_bacteria 8054609563 8054611815 199
34 3300038443 Ga0395901_0281476 Ga0395901_0281476_879_1571 200
35 3300044901 Ga0466960_0021038 Ga0466960_0021038_2188_2883 200
36 3300044901 Ga0466960_0070990 Ga0466960_0070990_82_762 200
37 3300049583 Ga0501067_0038219 Ga0501067_0038219_305_997 200
38 3300049585 Ga0501069_0019909 Ga0501069_0019909_328_1020 200
39 3300061734 Ga0530510_0168870 Ga0530510_0168870_449_1141 200
40 3300038996 Ga0242420_018282 Ga0242420_018282_497_1192 201
41 3300049851 Ga0501212_034002 Ga0501212_034002_95_787 201
42 3300032002 Ga0307416_100749931 Ga0307416_1007499312 203
43 3300044684 Ga0466966_0262216 Ga0466966_0262216_212_979 203
44 3300044693 Ga0466961_0037808 Ga0466961_0037808_1287_2054 203
45 3300044842 Ga0466957_0029208 Ga0466957_0029208_12_782 203
46 3300044901 Ga0466960_0041639 Ga0466960_0041639_1244_2011 203
47 3300026075 Ga0207708_10186593 Ga0207708_101865932 204
48 3300025918 Ga0207662_10515789 Ga0207662_105157891 207
49 3300026075 Ga0207708_10090727 Ga0207708_100907272 208
50 3300045836 Ga0466958_0269437 Ga0466958_0269437_23_820 210
51 iso_pu_bacteria 2643221615 2644092311 210
52 iso_pu_bacteria 2643221641 2644231759 210
53 iso_pu_bacteria 2643221657 2644322114 210
54 3300026142 Ga0207698_10291942 Ga0207698_102919422 212
55 3300044683 Ga0466965_0270204 Ga0466965_0270204_113_850 212
56 3300048903 Ga0496100_0179877 Ga0496100_0179877_197_952 212
57 3300049570 Ga0501033_0001990 Ga0501033_0001990_2306_3040 212
58 3300006038 Ga0075365_10019981 Ga0075365_100199813 213
59 3300006048 Ga0075363_100075556 Ga0075363_1000755561 213
60 3300006051 Ga0075364_10173220 Ga0075364_101732201 213
61 3300006353 Ga0075370_10046271 Ga0075370_100462713 213
62 3300044765 Ga0466970_0119872 Ga0466970_0119872_544_1284 213
63 3300049572 Ga0501036_0033311 Ga0501036_0033311_825_1568 213
64 3300049586 Ga0501070_0187450 Ga0501070_0187450_843_1559 213
65 3300049743 Ga0501081_0137585 Ga0501081_0137585_367_1110 213
66 3300050492 nmdc:mga0yw44_29124_c1 nmdc:mga0yw44_29124_c1_423_1160 213
67 3300053140 Ga0500573_0007176 Ga0500573_0007176_3022_3768 213
68 3300054114 Ga0501084_0033265 Ga0501084_0033265_957_1700 213
69 3300061734 Ga0530510_0280311 Ga0530510_0280311_398_1141 213
70 3300005445 Ga0070708_100438457 Ga0070708_1004384571 214
71 3300005471 Ga0070698_100002421 Ga0070698_10000242114 214
72 3300005985 Ga0081539_10085927 Ga0081539_100859272 214
73 3300006038 Ga0075365_10191062 Ga0075365_101910622 214
74 3300006048 Ga0075363_100259704 Ga0075363_1002597042 214
75 3300006178 Ga0075367_10190178 Ga0075367_101901782 214
76 3300013307 Ga0157372_10507235 Ga0157372_105072352 214
77 3300013308 Ga0157375_10183430 Ga0157375_101834303 214
78 3300017792 Ga0163161_10071581 Ga0163161_100715812 214
79 3300017792 Ga0163161_10157948 Ga0163161_101579482 214
80 3300031731 Ga0307405_10342673 Ga0307405_103426732 214
81 3300031824 Ga0307413_10067694 Ga0307413_100676942 214
82 3300031901 Ga0307406_10078349 Ga0307406_100783492 214
83 3300031903 Ga0307407_10048789 Ga0307407_100487892 214
84 3300031903 Ga0307407_10105425 Ga0307407_101054253 214
85 3300031911 Ga0307412_10295506 Ga0307412_102955062 214
86 3300032004 Ga0307414_10213927 Ga0307414_102139272 214
87 3300032126 Ga0307415_100000352 Ga0307415_10000035214 214
88 3300032126 Ga0307415_100383566 Ga0307415_1003835662 214
89 3300041512 Ga0451853_0630152 Ga0451853_0630152_279_1022 214
90 3300044693 Ga0466961_0131187 Ga0466961_0131187_685_1488 214
91 3300044694 Ga0466963_0163822 Ga0466963_0163822_500_1303 214
92 3300044706 Ga0466964_0005537 Ga0466964_0005537_1122_1925 214
93 3300044901 Ga0466960_0001267 Ga0466960_0001267_560_1279 214
94 3300045976 Ga0466967_0111071 Ga0466967_0111071_848_1651 214
95 3300048912 Ga0496109_0249222 Ga0496109_0249222_302_1006 214
96 3300048913 Ga0496110_0117947 Ga0496110_0117947_1526_2230 214
97 3300048915 Ga0496112_0368169 Ga0496112_0368169_301_1005 214
98 3300050492 nmdc:mga0yw44_462781_c1 nmdc:mga0yw44_462781_c1_40_696 214
99 3300053104 Ga0500556_0000699 Ga0500556_0000699_12937_13695 214
100 3300053117 Ga0500593_000024 Ga0500593_000024_24576_25334 214
101 3300031731 Ga0307405_10017341 Ga0307405_100173413 216
102 3300031852 Ga0307410_10119350 Ga0307410_101193502 216
103 3300031911 Ga0307412_10080666 Ga0307412_100806663 216
104 3300031995 Ga0307409_100001523 Ga0307409_1000015235 216
105 3300032002 Ga0307416_100000317 Ga0307416_10000031718 216
106 3300032004 Ga0307414_10181398 Ga0307414_101813981 216
107 3300005459 Ga0068867_100308036 Ga0068867_1003080362 217
108 3300009148 Ga0105243_10056103 Ga0105243_100561033 217
109 3300014745 Ga0157377_10219997 Ga0157377_102199971 217
110 3300025945 Ga0207679_10041062 Ga0207679_100410622 218
111 3300003323 rootH1_10169842 rootH1_101698422 221
112 3300005455 Ga0070663_100142945 Ga0070663_1001429452 221
113 3300005535 Ga0070684_100730591 Ga0070684_1007305912 221
114 3300006038 Ga0075365_10091899 Ga0075365_100918992 221
115 3300026067 Ga0207678_10152233 Ga0207678_101522332 221
116 3300045976 Ga0466967_0135898 Ga0466967_0135898_983_1738 221
117 3300049586 Ga0501070_0074006 Ga0501070_0074006_1678_2343 221
118 3300049586 Ga0501070_0405351 Ga0501070_0405351_28_693 221
119 3300050492 nmdc:mga0yw44_78845_c1 nmdc:mga0yw44_78845_c1_267_968 221

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02527

GidB

rRNA small subunit methyltransferase G

46

223

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cfe-assembly1.cif.gz_A crystal structure of rsmg methyltransferase of m. tuberculosis 0.9228 19 221
1xdz-assembly1.cif.gz_A crystal structure of gram_positive bacillus subtilis glucose inhibited division protein b (gidb), structural genomics, mcsg 0.8915 28 220
7cfe-assembly1.cif.gz_A crystal structure of rsmg methyltransferase of m. tuberculosis 0.8732 19 221
5kpg-assembly1.cif.gz_B pavine n-methyltransferase in complex with s-adenosylhomocysteine ph 7 0.8563 67 175
6gkz-assembly1.cif.gz_A crystal structure of coclaurine n-methyltransferase (cnmt) bound to n-methylheliamine and sah 0.8491 67 175
ID Description Score Start End Superfamily
af_P9WGW9_11_220_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9493 27 220 3.40.50.150
af_A0A0R0FLN9_30_232_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9053 78 220 3.40.50.150
af_Q9VJ34_368_539_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8915 67 149 3.40.50.150
af_Q67VB2_1_103_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8848 62 137 3.40.50.150
af_P9WGW9_11_220_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8746 27 220 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A1I2KPT1-F1-model_v4 Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase) 0.9758 15 220 GO:0005829
GO:0070043
AF-A0A2P2CK56-F1-model_v4 Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) 0.9741 19 220 GO:0005829
GO:0070043
AF-A0A6F8YIT3-F1-model_v4 Glucose-inhibited division protein B 0.9735 93 220 GO:0005829
GO:0070043
AF-A0A0B2AM45-F1-model_v4 Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase) 0.9733 22 218 GO:0005829
GO:0070043
AF-A0A1Q7C1D6-F1-model_v4 Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase) 0.9719 22 220 GO:0005829
GO:0070043

Feature Viewer

pLDDT pTM Quality
90.61 0.87 High
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Predicted Structure (AlphaFold2)

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