F102217

General Info

Members Datasets Scaffolds Average Seq Length
119 97 238 316

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10026039|Ga0265340_100260392
Length 367
Sequence MSDRNEAYRGRDTPSKVQQKLAAPNSFAGKARDGHGHARRAGPGSFHRRFWAGTPKMTTGIANSSGSKERAIDALERAALAAEAGAVDRPIAIATASDFSLLGSSDVRSRLDRVVMGPFPEIGLDGLLASGALDQLLPEIGALVGFGDGEWRHKDVWKHTKQVVAQAEPRLEVRYAALFHDIGKVKTRSISPEGEVHFLGHAEVGARMFEKFERRQRLFSNDETLRETIRTLVLHHLRASQYDGSWTDSAVRRFAREMGTQLDNLLCLSRADITTKRPEKRRRGVGLINELADRISQLAASDAIVPPLPKGVGSDLMTEFKLPPSKLIGDIKRALESAVDCGELESYRESAYYVEYVSAHRERFGLA

Samples

Sample ID Description Type Environment
1 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
25 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
26 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
37 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
38 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
39 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
40 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
41 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
44 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
45 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
46 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
47 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
48 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
49 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
52 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
53 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
54 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
58 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
59 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
63 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
64 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
65 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
66 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
67 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
71 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
72 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
73 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
74 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
75 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
76 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
77 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
85 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
86 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
94 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
95 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
96 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
97 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.52
Rhizosphere 89.08
Stem 0
Stem Tuber 0
Unclassified 2.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265340_10026039 3300031247 Bacteria 2959
2 rootH2_10079091 3300003320 Bacteria 16929
3 rootH2_10202860 3300003320 Bacteria 2968
4 Ga0070683_100070531 3300005329 Bacteria 3260
5 Ga0070683_100115046 3300005329 Bacteria 2539
6 Ga0070682_100004260 3300005337 Bacteria 7936
7 Ga0068868_100004478 3300005338 Bacteria 9799
8 Ga0070689_100002401 3300005340 Bacteria 12222
9 Ga0070705_100176826 3300005440 Bacteria 1442
10 Ga0070707_100152525 3300005468 Bacteria 2250
11 Ga0070684_100450026 3300005535 Bacteria 1190
12 Ga0070672_100000772 3300005543 Bacteria 19057
13 Ga0070686_100191130 3300005544 Bacteria 1461
14 Ga0068863_100086696 3300005841 Bacteria 2967
15 Ga0097621_100250438 3300006237 Bacteria 1551
16 Ga0097621_100324806 3300006237 Bacteria 1364
17 Ga0068871_100371880 3300006358 Bacteria 1268
18 Ga0075430_100009711 3300006846 Bacteria 8131
19 Ga0068865_100098220 3300006881 Bacteria 2139
20 Ga0097620_100042795 3300006931 Bacteria 4550
21 Ga0075435_100027775 3300007076 Bacteria 4430
22 Ga0105240_10470575 3300009093 Bacteria 1403
23 Ga0105240_10589872 3300009093 Bacteria 1225
24 Ga0111539_10006902 3300009094 Bacteria 14582
25 Ga0105245_10000792 3300009098 Bacteria 28707
26 Ga0157374_10298601 3300013296 Bacteria 1593
27 Ga0157378_10301483 3300013297 Bacteria 1551
28 Ga0157376_10057716 3300014969 Bacteria 3248
29 Ga0213876_10064633 3300021384 Bacteria 1931
30 Ga0207646_10129399 3300025922 Bacteria 2271
31 Ga0207687_10002416 3300025927 Bacteria 12672
32 Ga0207670_10001070 3300025936 Bacteria 14427
33 Ga0207691_10076711 3300025940 Bacteria 3011
34 Ga0207661_10153499 3300025944 Bacteria 1992
35 Ga0207667_10007451 3300025949 Bacteria 13148
36 Ga0207677_10001160 3300026023 Bacteria 14376
37 Ga0207702_10035901 3300026078 Bacteria 4145
38 Ga0207648_10008817 3300026089 Bacteria 9714
39 Ga0207683_10153960 3300026121 Bacteria 2076
40 Ga0207428_10168941 3300027907 Bacteria 1657
41 Ga0265337_1006114 3300028556 Bacteria 4685
42 Ga0265326_10005648 3300028558 Unclassified 3937
43 Ga0265319_1000070 3300028563 Bacteria 81633
44 Ga0265318_10000857 3300028577 Bacteria 20013
45 Ga0265318_10002530 3300028577 Bacteria 9708
46 Ga0265338_10071174 3300028800 Bacteria 2977
47 Ga0265330_10000461 3300031235 Bacteria 27147
48 Ga0265332_10000780 3300031238 Bacteria 19449
49 Ga0265332_10011330 3300031238 Bacteria 3965
50 Ga0265332_10034301 3300031238 Bacteria 2206
51 Ga0265328_10016800 3300031239 Bacteria 2842
52 Ga0265320_10000078 3300031240 Bacteria 84397
53 Ga0265320_10000265 3300031240 Bacteria 43333
54 Ga0265320_10048784 3300031240 Unclassified 2064
55 Ga0265325_10000810 3300031241 Bacteria 22622
56 Ga0265329_10000789 3300031242 Bacteria 16103
57 Ga0265340_10003005 3300031247 Bacteria 9597
58 Ga0265340_10045607 3300031247 Unclassified 2140
59 Ga0265339_10000965 3300031249 Bacteria 22026
60 Ga0265339_10001937 3300031249 Bacteria 15214
61 Ga0265331_10000542 3300031250 Bacteria 34434
62 Ga0265316_10001174 3300031344 Bacteria 28370
63 Ga0265316_10002894 3300031344 Bacteria 17553
64 Ga0265316_10009593 3300031344 Bacteria 8895
65 Ga0307513_10021048 3300031456 Bacteria 7709
66 Ga0265313_10001311 3300031595 Bacteria 23448
67 Ga0265313_10001464 3300031595 Bacteria 22028
68 Ga0307508_10009005 3300031616 Bacteria 9196
69 Ga0307514_10072291 3300031649 Bacteria 2583
70 Ga0265314_10000003 3300031711 Bacteria 1653386
71 Ga0265314_10001259 3300031711 Bacteria 28865
72 Ga0265314_10014653 3300031711 Bacteria 6258
73 Ga0265314_10127770 3300031711 Bacteria 1590
74 Ga0265342_10001089 3300031712 Bacteria 26239
75 Ga0265342_10090806 3300031712 Bacteria 1751
76 Ga0316576_10043989 3300031727 Bacteria 3224
77 Ga0316576_10054701 3300031727 Bacteria 2911
78 Ga0316576_10143355 3300031727 Bacteria 1799
79 Ga0316578_10075759 3300031728 Bacteria 1996
80 Ga0307516_10009324 3300031730 Bacteria 10958
81 Ga0307406_10016287 3300031901 Bacteria 4318
82 Ga0307412_10006240 3300031911 Bacteria 6728
83 Ga0307507_10008593 3300033179 Bacteria 14026
84 Ga0373956_0155960 3300035119 Bacteria 1075
85 Ga0373955_0114663 3300035172 Bacteria 1561
86 Ga0316574_0008726 3300035398 Bacteria 5643
87 Ga0316574_0214043 3300035398 Bacteria 1236
88 Ga0373931_0164406 3300035691 Bacteria 1303
89 Ga0316584_0147273 3300036712 Bacteria 1754
90 Ga0373925_0140898 3300037068 Bacteria 1887
91 Ga0436365_1731375 3300039437 Bacteria 2668
92 Ga0436360_0227685 3300039438 Bacteria 1164
93 Ga0436361_1220745 3300039447 Bacteria 1269
94 Ga0451797_0222130 3300041453 Bacteria 2065
95 Ga0451807_1069011 3300041486 Bacteria 2212
96 Ga0451853_2673171 3300041512 Bacteria 12089
97 Ga0439458_0023394 3300042157 Bacteria 1440
98 Ga0451577_0055294 3300042876 Bacteria 3542
99 Ga0453683_0029609 3300044673 Bacteria 3462
100 Ga0466965_0085053 3300044683 Bacteria 1603
101 Ga0466960_0025701 3300044901 Bacteria 2667
102 Ga0451576_0182229 3300045051 Bacteria 2193
103 Ga0495640_0218121 3300046533 Bacteria 1204
104 Ga0496114_0204882 3300048917 Bacteria 1729
105 Ga0501034_0152958 3300049571 Bacteria 2282
106 Ga0501067_0024654 3300049583 Bacteria 3336
107 Ga0501068_0021182 3300049584 Bacteria 3795
108 Ga0501069_0147907 3300049585 Bacteria 1349
109 Ga0501073_0168523 3300049589 Bacteria 1516
110 Ga0501077_0062569 3300049593 Bacteria 2361
111 Ga0501080_0232269 3300049742 Bacteria 1685
112 Ga0501035_0087006 3300049822 Bacteria 2754
113 nmdc:mga0qj67_7264_c1 3300050509 Bacteria 8183
114 nmdc:mga08y16_3848_c1 3300050511 Bacteria 15603
115 nmdc:mga0rr50_61323_c1 3300050513 Bacteria 2833
116 Ga0495601_0216163 3300053077 Bacteria 1252
117 Ga0590075_011612 3300059424 Bacteria 2131
118 Ga0501082_0036238 3300060353 Bacteria 4250
119 Ga0466962_0061360 3300061719 Bacteria 1795
120 Ga0265340_10026039
121 rootH2_10079091
122 rootH2_10202860
123 Ga0070683_100070531
124 Ga0070683_100115046
125 Ga0070682_100004260
126 Ga0068868_100004478
127 Ga0070689_100002401
128 Ga0070705_100176826
129 Ga0070707_100152525
130 Ga0070684_100450026
131 Ga0070672_100000772
132 Ga0070686_100191130
133 Ga0068863_100086696
134 Ga0097621_100250438
135 Ga0097621_100324806
136 Ga0068871_100371880
137 Ga0075430_100009711
138 Ga0068865_100098220
139 Ga0097620_100042795
140 Ga0075435_100027775
141 Ga0105240_10470575
142 Ga0105240_10589872
143 Ga0111539_10006902
144 Ga0105245_10000792
145 Ga0157374_10298601
146 Ga0157378_10301483
147 Ga0157376_10057716
148 Ga0213876_10064633
149 Ga0207646_10129399
150 Ga0207687_10002416
151 Ga0207670_10001070
152 Ga0207691_10076711
153 Ga0207661_10153499
154 Ga0207667_10007451
155 Ga0207677_10001160
156 Ga0207702_10035901
157 Ga0207648_10008817
158 Ga0207683_10153960
159 Ga0207428_10168941
160 Ga0265337_1006114
161 Ga0265326_10005648
162 Ga0265319_1000070
163 Ga0265318_10000857
164 Ga0265318_10002530
165 Ga0265338_10071174
166 Ga0265330_10000461
167 Ga0265332_10000780
168 Ga0265332_10011330
169 Ga0265332_10034301
170 Ga0265328_10016800
171 Ga0265320_10000078
172 Ga0265320_10000265
173 Ga0265320_10048784
174 Ga0265325_10000810
175 Ga0265329_10000789
176 Ga0265340_10003005
177 Ga0265340_10045607
178 Ga0265339_10000965
179 Ga0265339_10001937
180 Ga0265331_10000542
181 Ga0265316_10001174
182 Ga0265316_10002894
183 Ga0265316_10009593
184 Ga0307513_10021048
185 Ga0265313_10001311
186 Ga0265313_10001464
187 Ga0307508_10009005
188 Ga0307514_10072291
189 Ga0265314_10000003
190 Ga0265314_10001259
191 Ga0265314_10014653
192 Ga0265314_10127770
193 Ga0265342_10001089
194 Ga0265342_10090806
195 Ga0316576_10043989
196 Ga0316576_10054701
197 Ga0316576_10143355
198 Ga0316578_10075759
199 Ga0307516_10009324
200 Ga0307406_10016287
201 Ga0307412_10006240
202 Ga0307507_10008593
203 Ga0373956_0155960
204 Ga0373955_0114663
205 Ga0316574_0008726
206 Ga0316574_0214043
207 Ga0373931_0164406
208 Ga0316584_0147273
209 Ga0373925_0140898
210 Ga0436365_1731375
211 Ga0436360_0227685
212 Ga0436361_1220745
213 Ga0451797_0222130
214 Ga0451807_1069011
215 Ga0451853_2673171
216 Ga0439458_0023394
217 Ga0451577_0055294
218 Ga0453683_0029609
219 Ga0466965_0085053
220 Ga0466960_0025701
221 Ga0451576_0182229
222 Ga0495640_0218121
223 Ga0496114_0204882
224 Ga0501034_0152958
225 Ga0501067_0024654
226 Ga0501068_0021182
227 Ga0501069_0147907
228 Ga0501073_0168523
229 Ga0501077_0062569
230 Ga0501080_0232269
231 Ga0501035_0087006
232 nmdc:mga0qj67_7264_c1
233 nmdc:mga08y16_3848_c1
234 nmdc:mga0rr50_61323_c1
235 Ga0495601_0216163
236 Ga0590075_011612
237 Ga0501082_0036238
238 Ga0466962_0061360

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01966

HD

HD domain

156

276

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wfp-assembly10.cif.gz_C trna processing enzyme (apo form 2) 0.7802 15 237
3wfs-assembly2.cif.gz_D trna processing enzyme complex 3 0.7712 12 237
3wfp-assembly9.cif.gz_A trna processing enzyme (apo form 2) 0.7644 12 237
3wfr-assembly1.cif.gz_E trna processing enzyme complex 2 0.7596 12 237
3wfo-assembly3.cif.gz_C trna processing enzyme (apo form 1) 0.7565 11 237
ID Description Score Start End Superfamily
af_L7N672_164_416_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.8646 13 243 1.10.3090.10
af_L7N672_164_416_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.7904 13 243 1.10.3090.10
af_P06961_125_350_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.7681 11 220 1.10.3090.10
af_P9WN29_336_562_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.7405 17 231 1.10.3090.10
af_P06961_125_350_1.10.3090.10 Mainly Alpha;Orthogonal Bundle;cca-adding enzyme, domain 2;cca-adding enzyme, domain 2 0.7147 11 220 1.10.3090.10
ID Description Score Start End GO Terms
AF-A0A7X7GPG8-F1-model_v4 HD domain-containing protein 0.9381 1 310
AF-A0A850BWC9-F1-model_v4 HDIG domain-containing protein 0.9329 16 310
AF-A0A7X7GPG8-F1-model_v4 HD domain-containing protein 0.9293 1 310
AF-A0A850BWC9-F1-model_v4 HDIG domain-containing protein 0.921 16 310
AF-A0A1W9QEE7-F1-model_v4 HD domain-containing protein 0.9164 55 302

Map