F099521

General Info

Members Datasets Scaffolds Average Seq Length
118 100 236 282

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995463766|2995471317
Length 331
Sequence RMPNPFRPATASAPDRERRPDHPFGLSPGSFVELVRPAWDLGRMPGPVRLTSDVLRYTAFSTDPAGGNPAGVVLDARGVPDADMLTVAAEVGYSESAFVTERDEERRRFRLRYFSPLAEVAFCGHATVATAVALAQRLGEGSLLFDTAAGEIAVETAKDGDGVIRATLTSAPTRSRPVDAAVLAEALALLRWAPEDLDGELPPCVAFGGVEHLVLAVRSRSRLAALDYDFDGLAGLMDRQGWTTVQLVWRESPELYHARDPFPIGGVVEDPATGAAAAAFGGYLRDLGALPSSGAFTIRQGEDMGRPSTLAVTASPDDERVRVSGAAVAIG

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
14 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
15 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
16 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
17 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
18 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
19 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
20 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
22 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
31 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
32 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
33 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
34 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
35 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
36 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
37 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
38 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
39 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
40 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
41 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
42 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
43 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
44 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
45 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
46 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
47 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
48 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
49 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
50 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
51 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
52 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
53 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
54 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
55 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
56 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
57 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
58 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
59 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
60 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
61 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
62 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
63 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
64 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
65 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
66 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
67 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
68 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
69 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
70 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
71 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
72 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
73 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
80 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
81 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
82 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
83 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
84 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
85 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
86 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
87 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
88 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
89 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
90 2858868258 Micromonospora sp. MH33 Isolate Unclassified
91 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
92 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
93 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
94 2902582711 Micromonospora sp. AP08 Isolate Unclassified
95 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
96 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
97 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
98 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
99 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
100 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.44
Metatranscriptomes 0
Isolates 13.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.47
Nodule 1.69
Rhizoplane 5.08
Rhizosphere 63.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10014427 3300001979 Bacteria 2915
2 JGI24739J22299_10025510 3300001989 Bacteria 2078
3 JGI24737J22298_10031369 3300001990 Bacteria 1660
4 JGI24735J21928_10030865 3300002067 Bacteria 1590
5 JGI25406J46586_10008576 3300003203 Bacteria 4618
6 rootL2_10305627 3300003322 Bacteria 1466
7 JGI25160J50197_1011725 3300003354 Bacteria 3083
8 Ga0070661_100388911 3300005344 Bacteria 1101
9 Ga0070684_100235906 3300005535 Bacteria 1671
10 Ga0070684_100482334 3300005535 Bacteria 1148
11 Ga0068864_100322019 3300005618 Bacteria 1452
12 Ga0081455_10141230 3300005937 Bacteria 1870
13 Ga0081455_10319471 3300005937 Bacteria 1107
14 Ga0081539_10000286 3300005985 Bacteria 114239
15 Ga0105244_10012568 3300009036 Bacteria 4994
16 Ga0105244_10018083 3300009036 Bacteria 3966
17 Ga0105243_10001283 3300009148 Bacteria 22557
18 Ga0105029_100789 3300009984 Bacteria 1802
19 Ga0157372_10123449 3300013307 Bacteria 2977
20 Ga0157375_10151171 3300013308 Bacteria 2457
21 Ga0163163_10370770 3300014325 Bacteria 1489
22 Ga0213876_10002904 3300021384 Bacteria 9937
23 Ga0209676_1002549 3300025292 Bacteria 12652
24 Ga0209676_1057028 3300025292 Bacteria 992
25 Ga0207426_1005016 3300025302 Bacteria 6222
26 Ga0207426_1048568 3300025302 Bacteria 1274
27 Ga0207655_1003916 3300025728 Bacteria 10807
28 Ga0207655_1009134 3300025728 Bacteria 6195
29 Ga0207647_10014391 3300025904 Bacteria 5454
30 Ga0207687_10261729 3300025927 Bacteria 1379
31 Ga0207709_10007034 3300025935 Bacteria 6290
32 Ga0207709_10182120 3300025935 Bacteria 1484
33 Ga0207711_10274929 3300025941 Bacteria 1550
34 Ga0207668_10446406 3300025972 Bacteria 1103
35 Ga0207678_10149913 3300026067 Bacteria 1991
36 Ga0207702_10632601 3300026078 Bacteria 1052
37 Ga0307515_10000436 3300028794 Bacteria 100131
38 Ga0307515_10018613 3300028794 Bacteria 12549
39 Ga0307515_10031032 3300028794 Bacteria 8936
40 Ga0307511_10183129 3300030521 Bacteria 1124
41 Ga0307512_10029984 3300030522 Bacteria 4740
42 Ga0307512_10088748 3300030522 Bacteria 2167
43 Ga0307512_10178907 3300030522 Bacteria 1197
44 Ga0307513_10009965 3300031456 Bacteria 11988
45 Ga0307513_10221261 3300031456 Bacteria 1714
46 Ga0307513_10338948 3300031456 Bacteria 1255
47 Ga0307509_10126440 3300031507 Bacteria 2521
48 Ga0307508_10066622 3300031616 Bacteria 3170
49 Ga0307516_10001535 3300031730 Bacteria 31761
50 Ga0307516_10009386 3300031730 Bacteria 10914
51 Ga0307409_100030455 3300031995 Bacteria 3877
52 Ga0373941_0104176 3300035115 Bacteria 992
53 Ga0373942_0001502 3300035207 Bacteria 5998
54 Ga0373937_0080820 3300036401 Bacteria 3007
55 Ga0395901_0227869 3300038443 Bacteria 1946
56 Ga0395901_0270939 3300038443 Bacteria 1766
57 Ga0400490_18561 3300038726 Bacteria 2391
58 Ga0400488_15253 3300038741 Bacteria 3165
59 Ga0436363_1154068 3300039450 Bacteria 1510
60 Ga0439449_0018929 3300042007 Bacteria 2582
61 Ga0466961_0009893 3300044693 Bacteria 6077
62 Ga0466967_0233765 3300045976 Bacteria 1751
63 Ga0495617_000147 3300046452 Bacteria 45169
64 Ga0495627_036199 3300046453 Bacteria 1535
65 Ga0495592_0030415 3300046454 Bacteria 4084
66 Ga0495603_0023005 3300046455 Bacteria 3773
67 Ga0495629_0049988 3300046459 Bacteria 2930
68 Ga0495651_0250616 3300046462 Bacteria 1209
69 Ga0495585_0149242 3300046492 Bacteria 1220
70 Ga0495618_0019148 3300046514 Bacteria 4209
71 Ga0495628_0062991 3300046516 Bacteria 2906
72 Ga0495652_0306250 3300046529 Bacteria 1153
73 Ga0495640_0010680 3300046533 Bacteria 7082
74 Ga0495657_0035815 3300046675 Bacteria 3436
75 Ga0495599_0026778 3300046678 Bacteria 3614
76 Ga0495623_0026516 3300046679 Bacteria 3730
77 Ga0495613_0021093 3300046689 Bacteria 4857
78 Ga0495613_0309993 3300046689 Bacteria 1091
79 Ga0495600_0140202 3300046809 Bacteria 1569
80 Ga0495604_0017291 3300047317 Bacteria 5771
81 Ga0495676_0007331 3300047321 Bacteria 10121
82 Ga0495675_0003144 3300047444 Bacteria 9910
83 Ga0496102_0055851 3300048905 Bacteria 3601
84 Ga0496108_0141116 3300048911 Bacteria 2076
85 Ga0496110_0045379 3300048913 Bacteria 3841
86 Ga0496112_0005914 3300048915 Bacteria 10671
87 Ga0496113_0136255 3300048916 Bacteria 1929
88 Ga0496114_0056774 3300048917 Bacteria 3267
89 Ga0501033_0245679 3300049570 Bacteria 1269
90 Ga0501034_0167689 3300049571 Bacteria 2164
91 Ga0501038_0107847 3300049574 Bacteria 2310
92 Ga0501047_0008019 3300049581 Bacteria 9962
93 Ga0501047_0020909 3300049581 Bacteria 6286
94 Ga0501069_0031392 3300049585 Bacteria 2921
95 Ga0501070_0011594 3300049586 Bacteria 7442
96 Ga0501070_0305986 3300049586 Bacteria 1294
97 Ga0501044_0055435 3300049823 Bacteria 4071
98 Ga0500644_0005359 3300053088 Bacteria 3237
99 Ga0500651_0082795 3300053093 Bacteria 1986
100 Ga0500556_0079421 3300053104 Bacteria 1238
101 Ga0500652_002390 3300053131 Bacteria 5654
102 Ga0500577_0071730 3300053142 Bacteria 1360
103 2995471317 2995463766 Bacteria 8577691
104 2676198927 2675902999 Bacteria 9438463
105 2753074356 2751185734 Bacteria 8863695
106 2774843505 2773857921 Bacteria 9435764
107 2819743791 2818991472 Bacteria 10089953
108 2858875341 2858868258 Bacteria 7683772
109 2862295761 2862290372 Bacteria 7471434
110 2866612113 2866612099 Bacteria 7543886
111 2870728821 2870721527 Bacteria 9689237
112 2902583216 2902582711 Bacteria 6187705
113 2919450082 2919446982 Bacteria 3994487
114 2966603575 2966598605 Bacteria 7676064
115 3003004043 3002998708 Bacteria 11715108
116 8025480676 8025478263 Bacteria 8209203
117 8033684476 8033684223 Bacteria 6906479
118 8056208415 8056207758 Bacteria 8639239
119 JGI24740J21852_10014427
120 JGI24739J22299_10025510
121 JGI24737J22298_10031369
122 JGI24735J21928_10030865
123 JGI25406J46586_10008576
124 rootL2_10305627
125 JGI25160J50197_1011725
126 Ga0070661_100388911
127 Ga0070684_100235906
128 Ga0070684_100482334
129 Ga0068864_100322019
130 Ga0081455_10141230
131 Ga0081455_10319471
132 Ga0081539_10000286
133 Ga0105244_10012568
134 Ga0105244_10018083
135 Ga0105243_10001283
136 Ga0105029_100789
137 Ga0157372_10123449
138 Ga0157375_10151171
139 Ga0163163_10370770
140 Ga0213876_10002904
141 Ga0209676_1002549
142 Ga0209676_1057028
143 Ga0207426_1005016
144 Ga0207426_1048568
145 Ga0207655_1003916
146 Ga0207655_1009134
147 Ga0207647_10014391
148 Ga0207687_10261729
149 Ga0207709_10007034
150 Ga0207709_10182120
151 Ga0207711_10274929
152 Ga0207668_10446406
153 Ga0207678_10149913
154 Ga0207702_10632601
155 Ga0307515_10000436
156 Ga0307515_10018613
157 Ga0307515_10031032
158 Ga0307511_10183129
159 Ga0307512_10029984
160 Ga0307512_10088748
161 Ga0307512_10178907
162 Ga0307513_10009965
163 Ga0307513_10221261
164 Ga0307513_10338948
165 Ga0307509_10126440
166 Ga0307508_10066622
167 Ga0307516_10001535
168 Ga0307516_10009386
169 Ga0307409_100030455
170 Ga0373941_0104176
171 Ga0373942_0001502
172 Ga0373937_0080820
173 Ga0395901_0227869
174 Ga0395901_0270939
175 Ga0400490_18561
176 Ga0400488_15253
177 Ga0436363_1154068
178 Ga0439449_0018929
179 Ga0466961_0009893
180 Ga0466967_0233765
181 Ga0495617_000147
182 Ga0495627_036199
183 Ga0495592_0030415
184 Ga0495603_0023005
185 Ga0495629_0049988
186 Ga0495651_0250616
187 Ga0495585_0149242
188 Ga0495618_0019148
189 Ga0495628_0062991
190 Ga0495652_0306250
191 Ga0495640_0010680
192 Ga0495657_0035815
193 Ga0495599_0026778
194 Ga0495623_0026516
195 Ga0495613_0021093
196 Ga0495613_0309993
197 Ga0495600_0140202
198 Ga0495604_0017291
199 Ga0495676_0007331
200 Ga0495675_0003144
201 Ga0496102_0055851
202 Ga0496108_0141116
203 Ga0496110_0045379
204 Ga0496112_0005914
205 Ga0496113_0136255
206 Ga0496114_0056774
207 Ga0501033_0245679
208 Ga0501034_0167689
209 Ga0501038_0107847
210 Ga0501047_0008019
211 Ga0501047_0020909
212 Ga0501069_0031392
213 Ga0501070_0011594
214 Ga0501070_0305986
215 Ga0501044_0055435
216 Ga0500644_0005359
217 Ga0500651_0082795
218 Ga0500556_0079421
219 Ga0500652_002390
220 Ga0500577_0071730
221 2995471317
222 2676198927
223 2753074356
224 2774843505
225 2819743791
226 2858875341
227 2862295761
228 2866612113
229 2870728821
230 2902583216
231 2919450082
232 2966603575
233 3003004043
234 8025480676
235 8033684476
236 8056208415

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02567

PhzC-PhzF

Phenazine biosynthesis-like protein

57

331

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u1x-assembly1.cif.gz_B structure and function of phenazine-biosynthesis protein phzf from pseudomonas fluorescens 2-79 0.8957 7 271
1u0k-assembly1.cif.gz_B the structure of a predicted epimerase pa4716 from pseudomonas aeruginosa 0.891 5 271
5iwe-assembly1.cif.gz_A-2 e45q mutant of phenazine biosynthesis protein phzf in complex with (5r,6r)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate 0.886 7 271
1xub-assembly1.cif.gz_A-2 structure and function of the phenazine biosynthetic protein phzf from pseudomonas fluorescens 0.8792 4 271
1qy9-assembly2.cif.gz_C crystal structure of e. coli se-met protein ydde 0.8607 7 272
ID Description Score Start End Superfamily
1s7jA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9334 7 108 3.10.310.10
af_A0A2R8Q0H1_3_123_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9292 6 109 3.10.310.10
1sdjA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9228 7 107 3.10.310.10
af_Q8NIL3_2_111_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9085 5 105 3.10.310.10
1u1vA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.8942 7 107 3.10.310.10
ID Description Score Start End GO Terms
AF-A0A7K2ZRR1-F1-model_v4 Phenazine biosynthesis protein PhzF 0.9882 141 268 GO:0003824
GO:0009058
AF-A0A7K2MUC1-F1-model_v4 Phenazine biosynthesis protein PhzF 0.9873 127 268 GO:0003824
GO:0009058
AF-A0A6B3GD06-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9864 115 235 GO:0003824
GO:0009058
AF-A0A5H2XFG3-F1-model_v4 deleted 0.9777 111 267
AF-A0A3N6H3H0-F1-model_v4 Putative isomerase YddE (EC 5.1.-.-) 0.9776 1 273 GO:0005737
GO:0009058
GO:0016853

Map