F099483

General Info

Members Datasets Scaffolds Average Seq Length
118 81 236 663

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2897561785|2897564405
Length 721
Sequence PDSSTPPFNDEHAPRHAAGFPADAGATAPVTIGAPTNAPTAASPAGAPADADFPGSYRPVIGRIPILDLRPQLADNLFPAKSYEGDVVPFSAVAFREGHDRIGVELVIASPSGRTRRVRMQPGAPGTDRWETTVQPAEAGLHTWHVEAWGDDVATWRHNAGIKIPAGIDVEVMLEQGARVLDAATRDPQLGADDAAALRAAAERARVASATPDERFAALMDDAITSILDAHPVRSLLTRSDKRHLKVERRLAGTGAWYEFFPRSEGAERQPDGSWRSGTFGTAAKRVPEVARMGFDVLYLPPIHPIGRTNRKGPNNTLTAGPGDPGSPWAIGAAEGGHRSIHPDLGTEDDFRDFVRVVRDNGLELALDIALQAAPDHPWVTEHPEWFTVLPDGSIAYAENPPKKYQDIYPLNFDVDRNGLYQEVLDTFEYWISFGVTLFRVDNPHTKPLQFWEWVIHEVGAKHPDVIFLSEAFTRPAVMQALAKVGFQQSYTYFTWRNTKEELEEYLTEVSKETSDFLRPNFFVNTPDILTEYLQLGGPPAYRIRAIMAAMGSPLWGMYAGYELIENVARPGSEENLDNEKYEYKQRDWAAEEAVGRSLAPFITRLNEIRRAHPALQQLRNLEVHETDGDSIVAFSKHLAAEHNPAGVADTIIVIATVDPYVAHETTVHLDLERLGLVPGDRFDVEDLLTGRVWNWGDDNYVRLDPREQPAHVLHVRGRTA

Samples

Sample ID Description Type Environment
1 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
2 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
5 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
6 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
7 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
8 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
9 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
10 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
11 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
13 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
14 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
15 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
16 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
17 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
18 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
19 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
20 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
21 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
22 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
23 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
24 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
25 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
26 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
27 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
28 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
29 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
30 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
31 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
32 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
33 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
34 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
35 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
36 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
37 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
38 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
39 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
40 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
41 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
42 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
43 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
44 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
45 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
46 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
47 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
48 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
49 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
50 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
52 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
54 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
55 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
56 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
57 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
58 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
59 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
60 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
61 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
62 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
63 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
64 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
65 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
66 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
67 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
68 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
69 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
70 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
71 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
72 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
73 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
74 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
75 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
76 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
77 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
78 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
79 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
80 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
81 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.29
Metatranscriptomes 0
Isolates 12.71

Biome Distribution

Category Percentage (%)
Aerial Root 2.54
Bulb 0
Endosphere 3.39
Nodule 0
Rhizoplane 7.63
Rhizosphere 79.66
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070667_100008593 3300005367 Bacteria 8466
2 Ga0081455_10000134 3300005937 Bacteria 87309
3 Ga0081538_10000249 3300005981 Bacteria 61087
4 Ga0075428_100041024 3300006844 Bacteria 5090
5 Ga0075431_100013541 3300006847 Bacteria 8241
6 Ga0075429_100014667 3300006880 Bacteria 6795
7 Ga0111539_10018402 3300009094 Bacteria 8654
8 Ga0157370_10006407 3300013104 Bacteria 12981
9 Ga0163163_10103284 3300014325 Bacteria 2875
10 Ga0207647_10048835 3300025904 Bacteria 2627
11 Ga0207658_10010565 3300025986 Bacteria 6273
12 Ga0207428_10020772 3300027907 Bacteria 5570
13 Ga0265327_10003734 3300031251 Bacteria 14160
14 Ga0265327_10014036 3300031251 Bacteria 5272
15 Ga0326468_10000621 3300031889 Bacteria 3639
16 Ga0307406_10001217 3300031901 Bacteria 14403
17 Ga0307407_10008982 3300031903 Bacteria 4627
18 Ga0307416_100006117 3300032002 Bacteria 7495
19 Ga0307415_100024121 3300032126 Bacteria 3791
20 Ga0373935_0023005 3300035692 Bacteria 3827
21 Ga0395898_0104598 3300037466 Bacteria 2715
22 Ga0466969_0023783 3300044656 Bacteria 3155
23 Ga0466972_0007722 3300044658 Bacteria 5399
24 Ga0466965_0003617 3300044683 Bacteria 6808
25 Ga0466965_0004997 3300044683 Bacteria 5941
26 Ga0466965_0023737 3300044683 Bacteria 2962
27 Ga0466965_0026661 3300044683 Bacteria 2802
28 Ga0466966_0003370 3300044684 Bacteria 10532
29 Ga0466966_0047871 3300044684 Bacteria 2725
30 Ga0466961_0008957 3300044693 Bacteria 6384
31 Ga0466961_0019943 3300044693 Bacteria 4315
32 Ga0466961_0020795 3300044693 Bacteria 4224
33 Ga0466961_0023804 3300044693 Bacteria 3941
34 Ga0466963_0006124 3300044694 Bacteria 7096
35 Ga0466963_0013548 3300044694 Bacteria 5008
36 Ga0466963_0015820 3300044694 Bacteria 4681
37 Ga0466963_0017857 3300044694 Bacteria 4427
38 Ga0466964_0000145 3300044706 Bacteria 18974
39 Ga0466971_0004925 3300044719 Bacteria 5775
40 Ga0466971_0032822 3300044719 Bacteria 2326
41 Ga0466970_0007696 3300044765 Bacteria 5406
42 Ga0466957_0001413 3300044842 Bacteria 12517
43 Ga0466959_0028453 3300045049 Bacteria 4145
44 Ga0466959_0029132 3300045049 Bacteria 4091
45 Ga0466959_0057032 3300045049 Bacteria 2849
46 Ga0466958_0032854 3300045836 Bacteria 3089
47 Ga0466967_0000542 3300045976 Bacteria 18349
48 Ga0466967_0002753 3300045976 Bacteria 11114
49 Ga0466967_0004205 3300045976 Bacteria 9648
50 Ga0466967_0014252 3300045976 Bacteria 6184
51 Ga0466967_0016478 3300045976 Bacteria 5830
52 Ga0466967_0020414 3300045976 Bacteria 5355
53 Ga0466967_0032034 3300045976 Bacteria 4435
54 Ga0466967_0041844 3300045976 Bacteria 3954
55 Ga0466967_0043234 3300045976 Bacteria 3900
56 Ga0466967_0048676 3300045976 Bacteria 3703
57 Ga0466967_0108698 3300045976 Bacteria 2545
58 Ga0495629_0018171 3300046459 Bacteria 5037
59 Ga0495686_0000064 3300047472 Bacteria 226284
60 Ga0495686_0010804 3300047472 Bacteria 6474
61 Ga0496102_0000620 3300048905 Bacteria 36675
62 Ga0496104_0000027 3300048907 Bacteria 203475
63 Ga0496104_0111593 3300048907 Bacteria 2622
64 Ga0496104_0164844 3300048907 Bacteria 2125
65 Ga0496108_0015591 3300048911 Bacteria 6199
66 Ga0496109_0000758 3300048912 Bacteria 26847
67 Ga0496111_0023080 3300048914 Bacteria 4363
68 Ga0496114_0020764 3300048917 Bacteria 5332
69 Ga0496114_0110382 3300048917 Bacteria 2356
70 Ga0496119_0006187 3300048922 Bacteria 11193
71 Ga0496121_0054785 3300048924 Bacteria 3329
72 Ga0496124_0031930 3300048927 Bacteria 4657
73 Ga0496126_0000006 3300048929 Bacteria 798804
74 Ga0501033_0003000 3300049570 Bacteria 14091
75 Ga0501033_0034853 3300049570 Bacteria 3772
76 Ga0501034_0036239 3300049571 Bacteria 4997
77 Ga0501036_0014654 3300049572 Bacteria 6532
78 Ga0501036_0055976 3300049572 Bacteria 3341
79 Ga0501037_0021924 3300049573 Bacteria 4728
80 Ga0501043_0010775 3300049579 Bacteria 7160
81 Ga0501043_0029316 3300049579 Bacteria 4322
82 Ga0501047_0003143 3300049581 Bacteria 15663
83 Ga0501047_0021991 3300049581 Bacteria 6125
84 Ga0501047_0076397 3300049581 Bacteria 3223
85 Ga0501048_0000232 3300049582 Bacteria 36800
86 Ga0501073_0004479 3300049589 Bacteria 10495
87 Ga0501035_0007776 3300049822 Bacteria 10016
88 Ga0501035_0030722 3300049822 Bacteria 4897
89 Ga0501035_0039280 3300049822 Bacteria 4283
90 Ga0501035_0095924 3300049822 Bacteria 2606
91 nmdc:mga05p37_892_c1 3300050507 Bacteria 33638
92 nmdc:mga09592_946_c1 3300050508 Bacteria 22845
93 nmdc:mga0qj67_6334_c1 3300050509 Bacteria 8690
94 nmdc:mga06r32_927_c1 3300050510 Bacteria 26072
95 nmdc:mga08y16_2539_c1 3300050511 Bacteria 18772
96 nmdc:mga0n895_195600_c1 3300050512 Bacteria 2053
97 Ga0495619_0006497 3300053085 Bacteria 7399
98 Ga0500646_0000641 3300053090 Bacteria 10035
99 Ga0500641_0022089 3300053096 Bacteria 2433
100 Ga0500573_0010298 3300053140 Bacteria 5214
101 Ga0500616_0003629 3300053153 Bacteria 11608
102 Ga0466962_0015022 3300061719 Bacteria 3733
103 Ga0466962_0019821 3300061719 Bacteria 3231
104 2897564405 2897561785 Bacteria 3256946
105 2844854769 2844852863 Bacteria 3849151
106 2857720165 2857720070 Bacteria 3189373
107 2862995055 2862993130 Bacteria 3860849
108 2919045555 2919042368 Bacteria 3905917
109 2928092004 2928090899 Bacteria 3158267
110 2964327176 2964326757 Bacteria 3290868
111 2974316626 2974315732 Bacteria 4602776
112 2984524801 2984523437 Bacteria 4508481
113 2984554565 2984551494 Bacteria 3877562
114 2984581229 2984580707 Bacteria 3351387
115 2996221782 2996221748 Bacteria 6799777
116 8004022227 8004021418 Bacteria 4313954
117 8004026507 8004025490 Bacteria 4327753
118 8056038960 8056037122 Bacteria 3854319
119 Ga0070667_100008593
120 Ga0081455_10000134
121 Ga0081538_10000249
122 Ga0075428_100041024
123 Ga0075431_100013541
124 Ga0075429_100014667
125 Ga0111539_10018402
126 Ga0157370_10006407
127 Ga0163163_10103284
128 Ga0207647_10048835
129 Ga0207658_10010565
130 Ga0207428_10020772
131 Ga0265327_10003734
132 Ga0265327_10014036
133 Ga0326468_10000621
134 Ga0307406_10001217
135 Ga0307407_10008982
136 Ga0307416_100006117
137 Ga0307415_100024121
138 Ga0373935_0023005
139 Ga0395898_0104598
140 Ga0466969_0023783
141 Ga0466972_0007722
142 Ga0466965_0003617
143 Ga0466965_0004997
144 Ga0466965_0023737
145 Ga0466965_0026661
146 Ga0466966_0003370
147 Ga0466966_0047871
148 Ga0466961_0008957
149 Ga0466961_0019943
150 Ga0466961_0020795
151 Ga0466961_0023804
152 Ga0466963_0006124
153 Ga0466963_0013548
154 Ga0466963_0015820
155 Ga0466963_0017857
156 Ga0466964_0000145
157 Ga0466971_0004925
158 Ga0466971_0032822
159 Ga0466970_0007696
160 Ga0466957_0001413
161 Ga0466959_0028453
162 Ga0466959_0029132
163 Ga0466959_0057032
164 Ga0466958_0032854
165 Ga0466967_0000542
166 Ga0466967_0002753
167 Ga0466967_0004205
168 Ga0466967_0014252
169 Ga0466967_0016478
170 Ga0466967_0020414
171 Ga0466967_0032034
172 Ga0466967_0041844
173 Ga0466967_0043234
174 Ga0466967_0048676
175 Ga0466967_0108698
176 Ga0495629_0018171
177 Ga0495686_0000064
178 Ga0495686_0010804
179 Ga0496102_0000620
180 Ga0496104_0000027
181 Ga0496104_0111593
182 Ga0496104_0164844
183 Ga0496108_0015591
184 Ga0496109_0000758
185 Ga0496111_0023080
186 Ga0496114_0020764
187 Ga0496114_0110382
188 Ga0496119_0006187
189 Ga0496121_0054785
190 Ga0496124_0031930
191 Ga0496126_0000006
192 Ga0501033_0003000
193 Ga0501033_0034853
194 Ga0501034_0036239
195 Ga0501036_0014654
196 Ga0501036_0055976
197 Ga0501037_0021924
198 Ga0501043_0010775
199 Ga0501043_0029316
200 Ga0501047_0003143
201 Ga0501047_0021991
202 Ga0501047_0076397
203 Ga0501048_0000232
204 Ga0501073_0004479
205 Ga0501035_0007776
206 Ga0501035_0030722
207 Ga0501035_0039280
208 Ga0501035_0095924
209 nmdc:mga05p37_892_c1
210 nmdc:mga09592_946_c1
211 nmdc:mga0qj67_6334_c1
212 nmdc:mga06r32_927_c1
213 nmdc:mga08y16_2539_c1
214 nmdc:mga0n895_195600_c1
215 Ga0495619_0006497
216 Ga0500646_0000641
217 Ga0500641_0022089
218 Ga0500573_0010298
219 Ga0500616_0003629
220 Ga0466962_0015022
221 Ga0466962_0019821
222 2897564405
223 2844854769
224 2857720165
225 2862995055
226 2919045555
227 2928092004
228 2964327176
229 2974316626
230 2984524801
231 2984554565
232 2984581229
233 2996221782
234 8004022227
235 8004026507
236 8056038960

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11896

GlgE_dom_N_S

Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S

62

249

0.94

PF21702

GLGE_C

GLGE, C-terminal

624

716

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u3c-assembly3.cif.gz_E docking site of maltohexaose in the mtb glge 0.9566 5 656
4u33-assembly2.cif.gz_C structure of mtb glge bound to maltose 0.956 5 657
5cgm-assembly1.cif.gz_B structure of mycobacterium thermoresistibile glge in complex with maltose at 1.95a resolution 0.9493 5 656
4u33-assembly2.cif.gz_C structure of mtb glge bound to maltose 0.9446 5 657
4u3c-assembly3.cif.gz_E docking site of maltohexaose in the mtb glge 0.9424 5 656
ID Description Score Start End Superfamily
3zssA04 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9754 567 657 2.60.40.1180
5cimA03 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.971 197 565 3.20.20.80
5cimA03 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9653 197 565 3.20.20.80
5cgmB02 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.956 96 176 1.20.58.80
3zssA04 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9543 567 657 2.60.40.1180
ID Description Score Start End GO Terms
AF-A0A0M8VLE0-F1-model_v4 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 0.9899 371 496 GO:0016740
AF-A0A2S4Z868-F1-model_v4 Alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase 0.9893 558 657 GO:0016740
AF-A0A060CRA1-F1-model_v4 CAZy families GH13 protein 0.9887 311 438 GO:0016740
AF-A0A6G3UYB5-F1-model_v4 deleted 0.988 399 517
AF-A0A4R4LP95-F1-model_v4 Alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase 0.9863 323 608 GO:0016740

Map