F099179

General Info

Members Datasets Scaffolds Average Seq Length
118 96 118 332

Family's Representative Sequence

Representative Sequence 3300049823|Ga0501044_0015503|Ga0501044_0015503_1085_2152
Length 355
Sequence MLGFAWPARLLDRRQKMVRSLTVSEIAVIGAGSYGSCLAMLFGRAGHRVSMWARNAETAAQMQASRDCSYLPGHTLPPEVTVTSDLEAAVTGKQFVVGVTPSHGAREVLGRAARWMDPDAIVINASKGLEDRTLYTLDRVYQDIFPERIAMRATYLSGPTFAIEIAAGLPAAIVLAGRDPKTTQLAQEALMTLHFRIYSTEDVIGVLIGGALKNVIAIGAGVSDGLGFGSNTRVALMTRGLAEITRIGVAMGANPLTFMGLSGMGDLVLTCSGDASRNRRVGLALGQGKKMADILAEMKQVAEGVKTAKVAKELAEKLGVDAPIMSVMHAALYDGMPIRDVVEALLSRPAKGERD

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
4 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
5 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
6 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
13 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
14 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
15 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
16 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
17 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
18 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
19 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
20 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
21 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
42 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
45 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
46 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
52 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
53 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
54 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
58 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
63 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
69 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
70 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
71 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
72 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
73 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
74 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
75 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
76 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
77 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
78 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
79 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
82 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
83 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
84 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
85 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
86 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
87 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
88 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
89 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
90 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
91 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
92 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
93 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
94 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
95 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
96 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.71
Nodule 0
Rhizoplane 0.85
Rhizosphere 77.97
Stem 0
Stem Tuber 0
Unclassified 8.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100005232 3300005338 Bacteria 9107
2 Ga0070689_100033884 3300005340 Bacteria 3895
3 Ga0070688_100041043 3300005365 Bacteria 2839
4 Ga0070701_10168075 3300005438 Bacteria 1275
5 Ga0070678_100015413 3300005456 Bacteria 4859
6 Ga0070685_10215235 3300005466 Bacteria 1256
7 Ga0070698_100000933 3300005471 Bacteria 31971
8 Ga0070665_100001692 3300005548 Bacteria 25362
9 Ga0068855_100274667 3300005563 Bacteria 1873
10 Ga0068856_100040727 3300005614 Bacteria 4564
11 Ga0070717_10210845 3300006028 Bacteria 1705
12 Ga0075430_100120076 3300006846 Unclassified 2191
13 Ga0075429_100023927 3300006880 Bacteria 5300
14 Ga0075429_100031198 3300006880 Bacteria 4632
15 Ga0075429_100165553 3300006880 Bacteria 1937
16 Ga0068865_100076375 3300006881 Bacteria 2391
17 Ga0105245_10000289 3300009098 Bacteria 48028
18 Ga0105245_10121476 3300009098 Bacteria 2441
19 Ga0105249_10152462 3300009553 Bacteria 2226
20 Ga0105239_10211702 3300010375 Bacteria 2173
21 Ga0157379_10446742 3300014968 Bacteria 1193
22 Ga0157376_10014698 3300014969 Bacteria 5886
23 Ga0213876_10028365 3300021384 Bacteria 2951
24 Ga0207684_10134954 3300025910 Bacteria 2119
25 Ga0207652_10196827 3300025921 Bacteria 1813
26 Ga0207687_10021123 3300025927 Bacteria 4322
27 Ga0207687_10102958 3300025927 Bacteria 2104
28 Ga0207670_10063954 3300025936 Bacteria 2520
29 Ga0207704_10076970 3300025938 Bacteria 2140
30 Ga0207665_10054374 3300025939 Bacteria 2699
31 Ga0207689_10052278 3300025942 Bacteria 3367
32 Ga0207677_10003645 3300026023 Bacteria 8172
33 Ga0207641_10091278 3300026088 Bacteria 2665
34 Ga0207648_10046316 3300026089 Bacteria 3813
35 Ga0207676_10082288 3300026095 Bacteria 2618
36 Ga0207675_100349401 3300026118 Bacteria 1449
37 Ga0207683_10012055 3300026121 Bacteria 7380
38 Ga0209971_1006369 3300027682 Bacteria 2793
39 Ga0268266_10009998 3300028379 Bacteria 8328
40 Ga0268264_10261101 3300028381 Bacteria 1613
41 Ga0307515_10142353 3300028794 Bacteria 2564
42 Ga0265338_10041152 3300028800 Bacteria 4327
43 Ga0265338_10113919 3300028800 Bacteria 2171
44 Ga0265332_10018984 3300031238 Bacteria 3035
45 Ga0307513_10075097 3300031456 Bacteria 3512
46 Ga0307513_10369546 3300031456 Bacteria 1177
47 Ga0307509_10000176 3300031507 Bacteria 100893
48 Ga0307509_10009428 3300031507 Bacteria 12202
49 Ga0307509_10056786 3300031507 Bacteria 4154
50 Ga0307508_10073710 3300031616 Bacteria 2990
51 Ga0316576_10137173 3300031727 Bacteria 1841
52 Ga0307413_10029180 3300031824 Bacteria 3083
53 Ga0307410_10017016 3300031852 Bacteria 4353
54 Ga0307410_10092620 3300031852 Bacteria 2149
55 Ga0307406_10013697 3300031901 Bacteria 4651
56 Ga0307407_10093146 3300031903 Bacteria 1852
57 Ga0307409_100025827 3300031995 Bacteria 4129
58 Ga0307411_10042335 3300032005 Bacteria 2905
59 Ga0307415_100069213 3300032126 Bacteria 2474
60 Ga0307415_100111210 3300032126 Bacteria 2033
61 Ga0373949_0002177 3300035090 Bacteria 5137
62 Ga0373936_0000001 3300035113 Bacteria 456155
63 Ga0373961_0000028 3300035241 Bacteria 94923
64 Ga0395899_0005758 3300037312 Bacteria 9619
65 Ga0395900_0005058 3300037418 Bacteria 13833
66 Ga0395898_0149190 3300037466 Bacteria 2238
67 Ga0436365_0418431 3300039437 Bacteria 2980
68 Ga0451853_1119622 3300041512 Bacteria 1380
69 Ga0451577_0016586 3300042876 Bacteria 6816
70 Ga0453684_0142559 3300044712 Bacteria 2859
71 Ga0453684_0245849 3300044712 Bacteria 2057
72 Ga0453684_0519480 3300044712 Unclassified 1316
73 Ga0451576_0003150 3300045051 Bacteria 23089
74 Ga0495686_0080509 3300047472 Bacteria 1990
75 Ga0496104_0200440 3300048907 Bacteria 1908
76 Ga0501031_0173547 3300049568 Bacteria 1409
77 Ga0501040_0017876 3300049576 Bacteria 4707
78 Ga0501046_0200435 3300049580 Bacteria 1485
79 Ga0501047_0048569 3300049581 Bacteria 4098
80 Ga0501070_0046831 3300049586 Bacteria 3596
81 Ga0501070_0090091 3300049586 Bacteria 2538
82 Ga0501070_0139324 3300049586 Bacteria 2003
83 Ga0501070_0286420 3300049586 Bacteria 1343
84 Ga0501071_0035731 3300049587 Bacteria 3541
85 Ga0501075_0066011 3300049591 Bacteria 2730
86 Ga0501209_024526 3300049656 Bacteria 1470
87 Ga0501227_000250 3300049665 Bacteria 10989
88 Ga0501233_000924 3300049668 Bacteria 4980
89 Ga0501235_026226 3300049669 Bacteria 1305
90 Ga0501229_002907 3300049706 Bacteria 2030
91 Ga0501079_0087045 3300049741 Bacteria 2418
92 Ga0501080_0340128 3300049742 Bacteria 1356
93 Ga0501081_0010073 3300049743 Bacteria 6165
94 Ga0501081_0223426 3300049743 Bacteria 1370
95 Ga0501083_0097895 3300049744 Bacteria 1935
96 Ga0501044_0015503 3300049823 Bacteria 8208
97 Ga0501044_0161748 3300049823 Bacteria 2215
98 Ga0501044_0162934 3300049823 Bacteria 2205
99 nmdc:mga09592_151765_c1 3300050508 Bacteria 1999
100 nmdc:mga09592_23094_c1 3300050508 Bacteria 5134
101 nmdc:mga0qj67_114276_c1 3300050509 Bacteria 2180
102 Ga0500635_0003237 3300053080 Bacteria 4083
103 Ga0500566_0002497 3300053094 Bacteria 10925
104 Ga0500566_0072894 3300053094 Bacteria 1925
105 Ga0500640_014124 3300053095 Bacteria 3318
106 Ga0500554_001419 3300053102 Bacteria 4631
107 Ga0500572_001572 3300053111 Bacteria 6079
108 Ga0500595_000054 3300053119 Bacteria 85119
109 Ga0500597_013423 3300053120 Bacteria 3039
110 Ga0500597_078561 3300053120 Bacteria 1430
111 Ga0500614_000235 3300053123 Bacteria 14445
112 Ga0500614_015053 3300053123 Bacteria 1721
113 Ga0500568_0014328 3300053139 Bacteria 3584
114 Ga0500603_002491 3300053150 Bacteria 4026
115 Ga0500636_0024409 3300053177 Bacteria 3576
116 Ga0500601_001317 3300053737 Bacteria 2741
117 Ga0501084_0146381 3300054114 Bacteria 1990
118 Ga0501082_0016341 3300060353 Bacteria 6388

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049591 Ga0501075_0066011 Ga0501075_0066011_1795_2703 302
2 3300049741 Ga0501079_0087045 Ga0501079_0087045_16_924 302
3 3300049568 Ga0501031_0173547 Ga0501031_0173547_162_1079 305
4 3300049656 Ga0501209_024526 Ga0501209_024526_409_1416 306
5 3300049665 Ga0501227_000250 Ga0501227_000250_2592_3599 306
6 3300049668 Ga0501233_000924 Ga0501233_000924_1068_2075 306
7 3300049669 Ga0501235_026226 Ga0501235_026226_198_1205 306
8 3300049706 Ga0501229_002907 Ga0501229_002907_273_1280 306
9 3300047472 Ga0495686_0080509 Ga0495686_0080509_17_943 308
10 3300014968 Ga0157379_10446742 Ga0157379_104467422 309
11 3300025939 Ga0207665_10054374 Ga0207665_100543742 309
12 3300005340 Ga0070689_100033884 Ga0070689_1000338842 310
13 3300005365 Ga0070688_100041043 Ga0070688_1000410432 310
14 3300035090 Ga0373949_0002177 Ga0373949_0002177_1562_2572 313
15 3300031456 Ga0307513_10369546 Ga0307513_103695461 316
16 3300005471 Ga0070698_100000933 Ga0070698_10000093314 317
17 3300037418 Ga0395900_0005058 Ga0395900_0005058_2445_3446 318
18 3300026118 Ga0207675_100349401 Ga0207675_1003494012 321
19 3300048907 Ga0496104_0200440 Ga0496104_0200440_700_1665 321
20 3300009098 Ga0105245_10121476 Ga0105245_101214762 323
21 3300025927 Ga0207687_10102958 Ga0207687_101029582 323
22 3300025942 Ga0207689_10052278 Ga0207689_100522782 323
23 3300026088 Ga0207641_10091278 Ga0207641_100912782 323
24 3300009553 Ga0105249_10152462 Ga0105249_101524622 324
25 3300037312 Ga0395899_0005758 Ga0395899_0005758_1520_2521 324
26 3300037466 Ga0395898_0149190 Ga0395898_0149190_1033_2034 324
27 3300028800 Ga0265338_10041152 Ga0265338_100411523 328
28 3300031824 Ga0307413_10029180 Ga0307413_100291802 328
29 3300031852 Ga0307410_10017016 Ga0307410_100170164 328
30 3300031852 Ga0307410_10092620 Ga0307410_100926202 328
31 3300031903 Ga0307407_10093146 Ga0307407_100931462 328
32 3300031995 Ga0307409_100025827 Ga0307409_1000258276 328
33 3300032005 Ga0307411_10042335 Ga0307411_100423353 328
34 3300044712 Ga0453684_0142559 Ga0453684_0142559_618_1607 328
35 3300005438 Ga0070701_10168075 Ga0070701_101680752 329
36 3300006846 Ga0075430_100120076 Ga0075430_1001200763 331
37 3300049576 Ga0501040_0017876 Ga0501040_0017876_976_1971 331
38 3300049587 Ga0501071_0035731 Ga0501071_0035731_239_1234 331
39 3300049742 Ga0501080_0340128 Ga0501080_0340128_102_1097 331
40 3300049743 Ga0501081_0010073 Ga0501081_0010073_1404_2399 331
41 3300054114 Ga0501084_0146381 Ga0501084_0146381_457_1452 331
42 3300005456 Ga0070678_100015413 Ga0070678_1000154134 333
43 3300006880 Ga0075429_100031198 Ga0075429_1000311983 333
44 3300006880 Ga0075429_100165553 Ga0075429_1001655532 333
45 3300021384 Ga0213876_10028365 Ga0213876_100283653 333
46 3300026121 Ga0207683_10012055 Ga0207683_100120555 333
47 3300039437 Ga0436365_0418431 Ga0436365_0418431_1269_2270 333
48 3300041512 Ga0451853_1119622 Ga0451853_1119622_16_1017 333
49 3300049580 Ga0501046_0200435 Ga0501046_0200435_71_1090 333
50 3300049581 Ga0501047_0048569 Ga0501047_0048569_2576_3577 333
51 3300049586 Ga0501070_0139324 Ga0501070_0139324_581_1600 333
52 3300049823 Ga0501044_0015503 Ga0501044_0015503_1085_2152 333
53 3300049823 Ga0501044_0162934 Ga0501044_0162934_89_1090 333
54 3300050508 nmdc:mga09592_151765_c1 nmdc:mga09592_151765_c1_108_1109 333
55 3300050509 nmdc:mga0qj67_114276_c1 nmdc:mga0qj67_114276_c1_253_1254 333
56 3300005466 Ga0070685_10215235 Ga0070685_102152351 334
57 3300005548 Ga0070665_100001692 Ga0070665_1000016926 334
58 3300005563 Ga0068855_100274667 Ga0068855_1002746672 334
59 3300006028 Ga0070717_10210845 Ga0070717_102108452 334
60 3300006880 Ga0075429_100023927 Ga0075429_1000239271 334
61 3300006881 Ga0068865_100076375 Ga0068865_1000763752 334
62 3300009098 Ga0105245_10000289 Ga0105245_1000028911 334
63 3300010375 Ga0105239_10211702 Ga0105239_102117022 334
64 3300014969 Ga0157376_10014698 Ga0157376_100146982 334
65 3300025910 Ga0207684_10134954 Ga0207684_101349542 334
66 3300025921 Ga0207652_10196827 Ga0207652_101968272 334
67 3300025927 Ga0207687_10021123 Ga0207687_100211232 334
68 3300025938 Ga0207704_10076970 Ga0207704_100769702 334
69 3300026095 Ga0207676_10082288 Ga0207676_100822883 334
70 3300028379 Ga0268266_10009998 Ga0268266_100099987 334
71 3300028794 Ga0307515_10142353 Ga0307515_101423532 334
72 3300028800 Ga0265338_10113919 Ga0265338_101139192 334
73 3300031238 Ga0265332_10018984 Ga0265332_100189842 334
74 3300031456 Ga0307513_10075097 Ga0307513_100750972 334
75 3300031507 Ga0307509_10009428 Ga0307509_100094281 334
76 3300031507 Ga0307509_10056786 Ga0307509_100567862 334
77 3300031901 Ga0307406_10013697 Ga0307406_100136973 334
78 3300032126 Ga0307415_100111210 Ga0307415_1001112103 334
79 3300035113 Ga0373936_0000001 Ga0373936_0000001_21352_22362 334
80 3300035241 Ga0373961_0000028 Ga0373961_0000028_57743_58753 334
81 3300049586 Ga0501070_0046831 Ga0501070_0046831_1745_2755 334
82 3300049586 Ga0501070_0090091 Ga0501070_0090091_1442_2452 334
83 3300049586 Ga0501070_0286420 Ga0501070_0286420_87_1097 334
84 3300049743 Ga0501081_0223426 Ga0501081_0223426_47_1057 334
85 3300049744 Ga0501083_0097895 Ga0501083_0097895_834_1844 334
86 3300049823 Ga0501044_0161748 Ga0501044_0161748_768_1778 334
87 3300050508 nmdc:mga09592_23094_c1 nmdc:mga09592_23094_c1_3946_4956 334
88 3300053094 Ga0500566_0072894 Ga0500566_0072894_17_1027 334
89 3300053120 Ga0500597_078561 Ga0500597_078561_93_1103 334
90 3300053123 Ga0500614_015053 Ga0500614_015053_524_1543 334
91 3300053139 Ga0500568_0014328 Ga0500568_0014328_1769_2851 334
92 3300053177 Ga0500636_0024409 Ga0500636_0024409_64_1083 334
93 3300060353 Ga0501082_0016341 Ga0501082_0016341_2576_3586 334
94 3300025936 Ga0207670_10063954 Ga0207670_100639541 335
95 3300027682 Ga0209971_1006369 Ga0209971_10063693 335
96 3300028381 Ga0268264_10261101 Ga0268264_102611011 335
97 3300031507 Ga0307509_10000176 Ga0307509_1000017654 335
98 3300032126 Ga0307415_100069213 Ga0307415_1000692132 335
99 3300053095 Ga0500640_014124 Ga0500640_014124_950_1966 335
100 3300053102 Ga0500554_001419 Ga0500554_001419_3494_4510 335
101 3300053111 Ga0500572_001572 Ga0500572_001572_708_1724 335
102 3300053119 Ga0500595_000054 Ga0500595_000054_11180_12196 335
103 3300053120 Ga0500597_013423 Ga0500597_013423_1171_2187 335
104 3300053123 Ga0500614_000235 Ga0500614_000235_3368_4384 335
105 3300053737 Ga0500601_001317 Ga0500601_001317_934_1950 335
106 3300005338 Ga0068868_100005232 Ga0068868_10000523213 337
107 3300005614 Ga0068856_100040727 Ga0068856_1000407273 337
108 3300026023 Ga0207677_10003645 Ga0207677_100036454 337
109 3300026089 Ga0207648_10046316 Ga0207648_100463163 337
110 3300031616 Ga0307508_10073710 Ga0307508_100737101 337
111 3300031727 Ga0316576_10137173 Ga0316576_101371732 337
112 3300042876 Ga0451577_0016586 Ga0451577_0016586_2858_3892 337
113 3300044712 Ga0453684_0245849 Ga0453684_0245849_285_1307 337
114 3300044712 Ga0453684_0519480 Ga0453684_0519480_149_1183 337
115 3300045051 Ga0451576_0003150 Ga0451576_0003150_14459_15493 337
116 3300053080 Ga0500635_0003237 Ga0500635_0003237_385_1434 337
117 3300053094 Ga0500566_0002497 Ga0500566_0002497_6395_7444 337
118 3300053150 Ga0500603_002491 Ga0500603_002491_1650_2699 337

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07479

NAD_Gly3P_dh_C

NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus

202

343

0.99

PF01210

NAD_Gly3P_dh_N

NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus

25

183

0.97

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

25

138

0.9

PF20618

GPD_NAD_C_bact

Bacterial GPD, NAD-dependent C-terminal

262

328

0.9

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

25

128

0.86

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

26

141

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j36-assembly2.cif.gz_B cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9961 2 30
5x6r-assembly1.cif.gz_A crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.9944 2 30
7bkd-assembly1.cif.gz_a formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodislfide reductase core and mobile arm in conformational state 1, composite structure) 0.9932 3 34
4j33-assembly2.cif.gz_B crystal structure of kynurenine 3-monooxygenase (kmo-394) 0.9854 1 30
4j34-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. 0.9833 1 30
ID Description Score Start End Superfamily
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9961 2 30 3.50.50.60
af_P9WN75_188_329_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9832 186 326 1.10.1040.10
af_A0A1D6E3F3_39_301_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9772 2 34 3.50.50.60
af_Q2FYG1_190_332_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9723 190 331 1.10.1040.10
af_P9WN75_188_329_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9696 186 326 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A534S9A7-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9922 1 337 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A534S9A7-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9893 1 337 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A7V3SRU2-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9858 3 333 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A7W1JBX1-F1-model_v4 Glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) 0.9858 94 334 GO:0005829
GO:0005975
GO:0008654
GO:0046168
GO:0047952
GO:0051287
AF-A0A1E7ILA0-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9854 2 335 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287

Feature Viewer

pLDDT pTM Quality
95.92 0.93 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map