F096231

General Info

Members Datasets Scaffolds Average Seq Length
118 95 236 397

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100078282|Ga0070714_1000782822
Length 441
Sequence VTVVDARPDLPEGVGAVGAGHDATTHVRAGRHAVLLSDDGVRMSGVDDLGAGRGPSWLDEWLAGNIGDLVAWRRHMHANPELSRQEFATTDLVAGILKSVGLRPWVLPGGTGLICDVGEGDTCVALRADLDALPLPEMTDLPFRSTVDGVCHACGHDVHTTALLGAALAMAAAPALPGRVRFIFQPAEEVMPGGALDVIAAGGLDGVERIFGLHCDPHLEVGRVGTRVGPITAAADLLELRLTSPGGHTSRPHLTADLVHALGTVITGLPTLLSRRVDPRSGTVLVWGAVHAGEAANAVPQDGVLRGTLRTGDRETWAELAPLVAGLVESLLVPTGVGFDLQHRRGVPVVVNEEESTEILCAGVAAALGADALTSTKQSSGGEDFGWYLERVPGSFARLGVWSGEGILGDIHRPTFVADERALPAAVRVLVHTALAANAAS

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
22 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
23 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
28 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
29 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
45 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
46 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
47 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
48 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
49 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
50 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
51 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
54 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
59 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
60 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
61 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
62 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
63 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
64 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
65 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
66 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
67 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
68 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
69 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
70 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
74 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
75 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
76 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
77 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
78 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
79 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
80 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
81 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
82 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
83 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
84 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
85 2582580736 Prauserella sp. Am3 Isolate Unclassified
86 2643221692 Nocardia sp. Root136 Isolate Unclassified
87 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
88 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
89 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
90 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
91 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
92 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
93 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
94 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
95 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.44
Metatranscriptomes 4.24
Isolates 9.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.41
Nodule 0
Rhizoplane 3.39
Rhizosphere 66.1
Stem 0
Stem Tuber 0.85
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100078282 3300005435 Bacteria 2873
2 JGI25406J46586_10000799 3300003203 Bacteria 14857
3 Ga0070658_10004451 3300005327 Bacteria 11412
4 Ga0070658_10150665 3300005327 Bacteria 1947
5 Ga0070683_100131440 3300005329 Bacteria 2369
6 Ga0068868_100075718 3300005338 Bacteria 2690
7 Ga0070660_100088036 3300005339 Bacteria 2445
8 Ga0070660_100166214 3300005339 Bacteria 1780
9 Ga0070671_100028402 3300005355 Bacteria 4606
10 Ga0070659_100000652 3300005366 Bacteria 25359
11 Ga0070659_100178182 3300005366 Bacteria 1743
12 Ga0070667_100056999 3300005367 Bacteria 3300
13 Ga0070684_100040859 3300005535 Bacteria 3995
14 Ga0070686_100142015 3300005544 Bacteria 1672
15 Ga0070665_100007542 3300005548 Bacteria 11059
16 Ga0068860_100016425 3300005843 Bacteria 7218
17 Ga0081455_10005669 3300005937 Bacteria 13626
18 Ga0081539_10000915 3300005985 Bacteria 55784
19 Ga0075365_10016965 3300006038 Bacteria 4446
20 Ga0075365_10026538 3300006038 Bacteria 3678
21 Ga0075363_100002641 3300006048 Bacteria 7390
22 Ga0075363_100006962 3300006048 Bacteria 5171
23 Ga0075363_100025222 3300006048 Bacteria 3030
24 Ga0075364_10004393 3300006051 Bacteria 8105
25 Ga0075370_10004322 3300006353 Bacteria 6885
26 Ga0075429_100164244 3300006880 Bacteria 1945
27 Ga0105237_10019657 3300009545 Bacteria 6974
28 Ga0105035_100365 3300009988 Bacteria 2807
29 Ga0157371_10052224 3300013102 Bacteria 2903
30 Ga0157369_10001226 3300013105 Bacteria 31968
31 Ga0157369_10002936 3300013105 Bacteria 20400
32 Ga0157369_10019927 3300013105 Bacteria 7500
33 Ga0157369_10048253 3300013105 Bacteria 4620
34 Ga0157369_10092143 3300013105 Bacteria 3234
35 Ga0157372_10015789 3300013307 Bacteria 8101
36 Ga0206353_11427814 3300020082 Bacteria 1855
37 Ga0206353_11569328 3300020082 Bacteria 2026
38 Ga0206353_12054420 3300020082 Bacteria 2044
39 Ga0213876_10031918 3300021384 Bacteria 2778
40 Ga0213875_10001371 3300021388 Bacteria 15986
41 Ga0224712_10009563 3300022467 Bacteria 2927
42 Ga0224712_10038822 3300022467 Bacteria 1781
43 Ga0207705_10003851 3300025909 Bacteria 11422
44 Ga0207705_10043892 3300025909 Bacteria 3212
45 Ga0207705_10071101 3300025909 Bacteria 2522
46 Ga0207671_10026621 3300025914 Bacteria 4331
47 Ga0207657_10101451 3300025919 Bacteria 2388
48 Ga0207657_10137449 3300025919 Bacteria 1998
49 Ga0207652_10045436 3300025921 Bacteria 3745
50 Ga0207664_10002529 3300025929 Bacteria 12090
51 Ga0207644_10005020 3300025931 Bacteria 8639
52 Ga0207690_10000219 3300025932 Bacteria 43461
53 Ga0207690_10066999 3300025932 Bacteria 2461
54 Ga0207689_10339468 3300025942 Bacteria 1248
55 Ga0207661_10027406 3300025944 Bacteria 4352
56 Ga0207661_10170812 3300025944 Bacteria 1893
57 Ga0207640_10294332 3300025981 Bacteria 1281
58 Ga0207678_10025573 3300026067 Bacteria 5152
59 Ga0207641_10008550 3300026088 Bacteria 8456
60 Ga0268266_10007306 3300028379 Bacteria 9982
61 Ga0268264_10099310 3300028381 Bacteria 2526
62 Ga0307511_10002629 3300030521 Bacteria 18733
63 Ga0307513_10072392 3300031456 Bacteria 3592
64 Ga0307413_10001396 3300031824 Bacteria 9107
65 Ga0307518_10024014 3300031838 Bacteria 4395
66 Ga0436364_1326662 3300037853 Bacteria 39324
67 Ga0436365_0159974 3300039437 Bacteria 5986
68 Ga0466972_0008258 3300044658 Bacteria 5217
69 Ga0466965_0002817 3300044683 Bacteria 7493
70 Ga0466961_0003691 3300044693 Bacteria 9556
71 Ga0466961_0007449 3300044693 Bacteria 6967
72 Ga0466971_0012383 3300044719 Bacteria 3737
73 Ga0466968_0003059 3300044735 Bacteria 6186
74 Ga0466970_0139625 3300044765 Bacteria 1334
75 Ga0466957_0002915 3300044842 Bacteria 9266
76 Ga0466960_0014970 3300044901 Bacteria 3334
77 Ga0466958_0004494 3300045836 Bacteria 7366
78 Ga0466967_0008955 3300045976 Bacteria 7391
79 Ga0466967_0073440 3300045976 Bacteria 3069
80 Ga0495650_0056087 3300046471 Bacteria 1600
81 Ga0496101_0002885 3300048904 Bacteria 10574
82 Ga0496102_0000127 3300048905 Bacteria 104838
83 Ga0496103_0000134 3300048906 Bacteria 77847
84 Ga0496104_0015634 3300048907 Bacteria 6880
85 Ga0496116_0000228 3300048919 Bacteria 104766
86 Ga0496117_0000204 3300048920 Bacteria 116843
87 Ga0496118_0000202 3300048921 Bacteria 104816
88 Ga0496119_0000700 3300048922 Bacteria 44933
89 Ga0496121_0037579 3300048924 Bacteria 4298
90 Ga0496126_0000246 3300048929 Bacteria 116854
91 Ga0496126_0000490 3300048929 Bacteria 77991
92 Ga0501039_0186759 3300049575 Bacteria 1630
93 Ga0501042_0072763 3300049578 Bacteria 2459
94 Ga0501069_0039331 3300049585 Bacteria 2613
95 Ga0501070_0047512 3300049586 Bacteria 3566
96 Ga0501072_0007666 3300049588 Bacteria 8193
97 Ga0501035_0355668 3300049822 Bacteria 1225
98 nmdc:mga03683_8017_c1 3300050489 Bacteria 3695
99 nmdc:mga03n38_39414_c1 3300050490 Bacteria 2048
100 nmdc:mga03n38_48760_c1 3300050490 Bacteria 1880
101 nmdc:mga00v17_6915_c1 3300050491 Bacteria 6031
102 nmdc:mga0yw44_1101_c1 3300050492 Bacteria 10392
103 nmdc:mga0yw44_39675_c1 3300050492 Bacteria 2793
104 nmdc:mga07m45_6584_c1 3300050496 Bacteria 5884
105 Ga0500644_0003399 3300053088 Bacteria 3936
106 Ga0500559_0019621 3300053136 Bacteria 2856
107 Ga0500577_0010522 3300053142 Bacteria 2727
108 2583152404 2582580736 Bacteria 5325865
109 2644515162 2643221692 Bacteria 7282860
110 2791915894 2791354901 Bacteria 8322202
111 2795782061 2795385470 Bacteria 8317180
112 2795795083 2795385472 Bacteria 6627535
113 2899375127 2899370129 Bacteria 6781179
114 2956941151 2956939328 Bacteria 3474458
115 2974318026 2974315732 Bacteria 4602776
116 3001120839 3001119090 Bacteria 3449530
117 8003323299 8003314358 Bacteria 10575343
118 8054475103 8054472261 Bacteria 7464355
119 Ga0070714_100078282
120 JGI25406J46586_10000799
121 Ga0070658_10004451
122 Ga0070658_10150665
123 Ga0070683_100131440
124 Ga0068868_100075718
125 Ga0070660_100088036
126 Ga0070660_100166214
127 Ga0070671_100028402
128 Ga0070659_100000652
129 Ga0070659_100178182
130 Ga0070667_100056999
131 Ga0070684_100040859
132 Ga0070686_100142015
133 Ga0070665_100007542
134 Ga0068860_100016425
135 Ga0081455_10005669
136 Ga0081539_10000915
137 Ga0075365_10016965
138 Ga0075365_10026538
139 Ga0075363_100002641
140 Ga0075363_100006962
141 Ga0075363_100025222
142 Ga0075364_10004393
143 Ga0075370_10004322
144 Ga0075429_100164244
145 Ga0105237_10019657
146 Ga0105035_100365
147 Ga0157371_10052224
148 Ga0157369_10001226
149 Ga0157369_10002936
150 Ga0157369_10019927
151 Ga0157369_10048253
152 Ga0157369_10092143
153 Ga0157372_10015789
154 Ga0206353_11427814
155 Ga0206353_11569328
156 Ga0206353_12054420
157 Ga0213876_10031918
158 Ga0213875_10001371
159 Ga0224712_10009563
160 Ga0224712_10038822
161 Ga0207705_10003851
162 Ga0207705_10043892
163 Ga0207705_10071101
164 Ga0207671_10026621
165 Ga0207657_10101451
166 Ga0207657_10137449
167 Ga0207652_10045436
168 Ga0207664_10002529
169 Ga0207644_10005020
170 Ga0207690_10000219
171 Ga0207690_10066999
172 Ga0207689_10339468
173 Ga0207661_10027406
174 Ga0207661_10170812
175 Ga0207640_10294332
176 Ga0207678_10025573
177 Ga0207641_10008550
178 Ga0268266_10007306
179 Ga0268264_10099310
180 Ga0307511_10002629
181 Ga0307513_10072392
182 Ga0307413_10001396
183 Ga0307518_10024014
184 Ga0436364_1326662
185 Ga0436365_0159974
186 Ga0466972_0008258
187 Ga0466965_0002817
188 Ga0466961_0003691
189 Ga0466961_0007449
190 Ga0466971_0012383
191 Ga0466968_0003059
192 Ga0466970_0139625
193 Ga0466957_0002915
194 Ga0466960_0014970
195 Ga0466958_0004494
196 Ga0466967_0008955
197 Ga0466967_0073440
198 Ga0495650_0056087
199 Ga0496101_0002885
200 Ga0496102_0000127
201 Ga0496103_0000134
202 Ga0496104_0015634
203 Ga0496116_0000228
204 Ga0496117_0000204
205 Ga0496118_0000202
206 Ga0496119_0000700
207 Ga0496121_0037579
208 Ga0496126_0000246
209 Ga0496126_0000490
210 Ga0501039_0186759
211 Ga0501042_0072763
212 Ga0501069_0039331
213 Ga0501070_0047512
214 Ga0501072_0007666
215 Ga0501035_0355668
216 nmdc:mga03683_8017_c1
217 nmdc:mga03n38_39414_c1
218 nmdc:mga03n38_48760_c1
219 nmdc:mga00v17_6915_c1
220 nmdc:mga0yw44_1101_c1
221 nmdc:mga0yw44_39675_c1
222 nmdc:mga07m45_6584_c1
223 Ga0500644_0003399
224 Ga0500559_0019621
225 Ga0500577_0010522
226 2583152404
227 2644515162
228 2791915894
229 2795782061
230 2795795083
231 2899375127
232 2956941151
233 2974318026
234 3001120839
235 8003323299
236 8054475103

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

125

436

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ewt-assembly1.cif.gz_D the crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus 0.9461 41 423
4ewt-assembly1.cif.gz_B the crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus 0.9382 41 419
4ewt-assembly1.cif.gz_D the crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus 0.9298 41 423
4ewt-assembly1.cif.gz_B the crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus 0.9262 41 419
1ysj-assembly1.cif.gz_B crystal structure of bacillus subtilis yxep protein (apc1829), a dinuclear metal binding peptidase from m20 family 0.9099 47 419
ID Description Score Start End Superfamily
4ewtB01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9329 41 419 3.40.630.10
af_A0A0R0IPM1_21_184_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9301 44 155 3.40.630.10
4ewtD02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9205 218 330 3.30.70.360
af_A0A0R0IPM0_41_149_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9195 219 326 3.30.70.360
2q43A01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9183 42 419 3.40.630.10
ID Description Score Start End GO Terms
AF-G9YJ16-F1-model_v4 Amidohydrolase 0.965 41 422 GO:0016787
GO:0046872
AF-A0A4Q3C0M8-F1-model_v4 deleted 0.962 44 337
AF-A0A7C4K6K5-F1-model_v4 Amidohydrolase 0.9591 42 418 GO:0016787
GO:0046872
AF-D4MAB8-F1-model_v4 deleted 0.9586 41 423
AF-A0A7V7MY28-F1-model_v4 Amidohydrolase 0.9582 40 422 GO:0016787
GO:0046872

Map