F093503

General Info

Members Datasets Scaffolds Average Seq Length
117 104 234 349

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10084259|Ga0307509_100842592
Length 369
Sequence MIEVTRGDILKAHAEALVNTVNCVGVMGRGIAAQFKRAYPENFSAYQQACKRHELQPGRMLIVETGQLAPRWVINFPTKRHWRGNSRIEDIDAGLAALVEDIRRLGIRSIAVPPLGCGLGGLDWAVVRPRIEQAFAALPDVTVLLFEPDGAPRPEEMIRSTHVPTMTPGRAVLIGLVERYLAGLMDPFVSLLEIHKLMYFMQESGEPLRLRYTKAPYGPYAENLRQVLTHVEGHFLTGYADGGDAPGKQLELVPGASKTALAFLEAHPDTKARFDRVAALVQGFETPFGMELLATVHWVAVHDGARTVDEAVDAVYQWNDRKRVFEPRQIQLAWDVLDAGGWLGPDQLDATAPLTFTAGGLLSGDGPRS

Samples

Sample ID Description Type Environment
1 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
56 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
57 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
58 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
59 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
63 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
64 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
65 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
66 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
67 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
72 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
73 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
74 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
80 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
81 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
85 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
86 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
87 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
88 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
89 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
90 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
91 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
92 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
93 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
94 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
95 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
96 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
97 2643221660 Methylibium sp. Root1272 Isolate Unclassified
98 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
99 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
100 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
101 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
102 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
103 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
104 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.45
Metatranscriptomes 0
Isolates 8.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.84
Nodule 3.42
Rhizoplane 0
Rhizosphere 77.78
Stem 0
Stem Tuber 0
Unclassified 5.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307509_10084259 3300031507 Bacteria 3275
2 SwRhRL2b_contig_3646105 2162886007 Bacteria 4571
3 JGI25406J46586_10007919 3300003203 Bacteria 4835
4 rootL2_10000041 3300003322 Bacteria 83940
5 Ga0065704_10070717 3300005289 Bacteria 17179
6 Ga0070676_10013178 3300005328 Bacteria 4529
7 Ga0070683_100179186 3300005329 Bacteria 2011
8 Ga0070677_10001268 3300005333 Bacteria 8094
9 Ga0070680_100097869 3300005336 Bacteria 2433
10 Ga0070681_10074791 3300005458 Bacteria 3348
11 Ga0070681_10145781 3300005458 Bacteria 2296
12 Ga0070693_100077929 3300005547 Bacteria 1968
13 Ga0068855_100267020 3300005563 Bacteria 1904
14 Ga0068852_100064397 3300005616 Bacteria 3195
15 Ga0068859_100162972 3300005617 Bacteria 2309
16 Ga0068859_100188331 3300005617 Bacteria 2147
17 Ga0068870_10007175 3300005840 Bacteria 4960
18 Ga0068863_100030418 3300005841 Bacteria 5156
19 Ga0068858_100182002 3300005842 Bacteria 1985
20 Ga0068860_100039389 3300005843 Bacteria 4520
21 Ga0068860_100137707 3300005843 Unclassified 2345
22 Ga0081455_10050790 3300005937 Bacteria 3562
23 Ga0081539_10016894 3300005985 Bacteria 5173
24 Ga0075365_10051700 3300006038 Bacteria 2715
25 Ga0075366_10027493 3300006195 Bacteria 3338
26 Ga0075433_10001184 3300006852 Bacteria 18962
27 Ga0075434_100266528 3300006871 Bacteria 1732
28 Ga0075429_100262641 3300006880 Unclassified 1512
29 Ga0097620_100069421 3300006931 Unclassified 3559
30 Ga0097620_100162980 3300006931 Bacteria 2309
31 Ga0097620_100188333 3300006931 Bacteria 2147
32 Ga0105240_10198637 3300009093 Bacteria 2352
33 Ga0114129_10183608 3300009147 Bacteria 2845
34 Ga0105239_10202366 3300010375 Bacteria 2225
35 Ga0157373_10017651 3300013100 Bacteria 5196
36 Ga0157370_10053564 3300013104 Bacteria 3847
37 Ga0157369_10119263 3300013105 Bacteria 2800
38 Ga0157374_10234264 3300013296 Bacteria 1804
39 Ga0157378_10136350 3300013297 Bacteria 2276
40 Ga0182008_10000160 3300014497 Bacteria 52928
41 Ga0207682_10002502 3300025893 Bacteria 8213
42 Ga0207645_10018566 3300025907 Bacteria 4571
43 Ga0207643_10008390 3300025908 Bacteria 5540
44 Ga0207705_10089891 3300025909 Bacteria 2247
45 Ga0207707_10019809 3300025912 Bacteria 5874
46 Ga0207707_10325129 3300025912 Bacteria 1327
47 Ga0207670_10001810 3300025936 Bacteria 11161
48 Ga0207667_10223996 3300025949 Bacteria 1927
49 Ga0207667_10336382 3300025949 Bacteria 1541
50 Ga0207641_10016787 3300026088 Bacteria 5995
51 Ga0207698_10085591 3300026142 Bacteria 2560
52 Ga0268264_10267187 3300028381 Unclassified 1596
53 Ga0265327_10005926 3300031251 Bacteria 9974
54 Ga0265316_10023069 3300031344 Bacteria 5233
55 Ga0265316_10034376 3300031344 Bacteria 4118
56 Ga0265316_10092329 3300031344 Bacteria 2308
57 Ga0307513_10007030 3300031456 Bacteria 14640
58 Ga0307509_10276595 3300031507 Bacteria 1443
59 Ga0316576_10143726 3300031727 Bacteria 1796
60 Ga0307516_10002629 3300031730 Bacteria 23801
61 Ga0307413_10015722 3300031824 Bacteria 3886
62 Ga0307412_10000210 3300031911 Bacteria 39741
63 Ga0307409_100260226 3300031995 Bacteria 1592
64 Ga0307414_10009105 3300032004 Bacteria 5685
65 Ga0307411_10000492 3300032005 Bacteria 13753
66 Ga0400484_09828 3300038725 Bacteria 2620
67 Ga0400491_11441 3300038727 Bacteria 2995
68 Ga0400486_07368 3300038742 Bacteria 2749
69 Ga0400487_18976 3300039110 Bacteria 2271
70 Ga0453684_0013816 3300044712 Bacteria 13044
71 Ga0451576_0009322 3300045051 Bacteria 11398
72 Ga0495591_007486 3300046458 Bacteria 4636
73 Ga0495650_0000020 3300046471 Bacteria 533839
74 Ga0495605_0000106 3300046474 Bacteria 105494
75 Ga0495616_0000460 3300046513 Bacteria 30949
76 Ga0495620_0028690 3300046515 Bacteria 2584
77 Ga0495654_0000109 3300046530 Bacteria 93356
78 Ga0495625_0001046 3300046660 Bacteria 36303
79 Ga0495624_0190227 3300046690 Bacteria 1249
80 Ga0495674_0156018 3300047319 Bacteria 1912
81 Ga0495673_0000296 3300047469 Bacteria 66691
82 Ga0496122_0083783 3300048925 Bacteria 2209
83 Ga0496124_0002891 3300048927 Bacteria 21669
84 Ga0496125_0009719 3300048928 Bacteria 9821
85 Ga0501034_0178468 3300049571 Unclassified 2089
86 Ga0501034_0366685 3300049571 Bacteria 1367
87 Ga0501040_0010326 3300049576 Bacteria 6105
88 Ga0501046_0018301 3300049580 Bacteria 5832
89 Ga0501047_0198644 3300049581 Bacteria 1867
90 Ga0501070_0023380 3300049586 Bacteria 5178
91 Ga0501076_0112315 3300049592 Bacteria 2203
92 Ga0501238_002852 3300049671 Bacteria 2097
93 Ga0501035_0003897 3300049822 Bacteria 14233
94 Ga0501044_0014453 3300049823 Bacteria 8522
95 nmdc:mga00v17_159541_c1 3300050491 Bacteria 1451
96 nmdc:mga0yw44_15491_c2 3300050492 Bacteria 3411
97 nmdc:mga0k408_2850_c1 3300050493 Bacteria 9176
98 nmdc:mga09592_250892_c1 3300050508 Unclassified 1534
99 nmdc:mga0n895_266203_c1 3300050512 Bacteria 1739
100 nmdc:mga0a205_286_c1 3300050515 Bacteria 37132
101 nmdc:mga0a205_364751_c1 3300050515 Bacteria 1311
102 Ga0500564_000064 3300053138 Bacteria 28288
103 Ga0500616_0004941 3300053153 Bacteria 9256
104 Ga0500627_0000181 3300053158 Bacteria 18431
105 Ga0501084_0068748 3300054114 Bacteria 2965
106 Ga0530510_0002760 3300061734 Bacteria 12066
107 Ga0530510_0035196 3300061734 Bacteria 3608
108 2501082169 2501025502 Bacteria 9641094
109 2511086483 2510917013 Bacteria 9951648
110 2644337713 2643221660 Bacteria 4208257
111 2787507889 2786546548 Bacteria 4745694
112 2889421655 2889415604 Bacteria 8048700
113 2924226944 2924221636 Bacteria 7113495
114 2928118279 2928115317 Bacteria 6477646
115 2967708273 2967706974 Bacteria 7186053
116 2970142938 2970136068 Bacteria 7207982
117 8055268234 8055266321 Bacteria 7999742
118 Ga0307509_10084259
119 SwRhRL2b_contig_3646105
120 JGI25406J46586_10007919
121 rootL2_10000041
122 Ga0065704_10070717
123 Ga0070676_10013178
124 Ga0070683_100179186
125 Ga0070677_10001268
126 Ga0070680_100097869
127 Ga0070681_10074791
128 Ga0070681_10145781
129 Ga0070693_100077929
130 Ga0068855_100267020
131 Ga0068852_100064397
132 Ga0068859_100162972
133 Ga0068859_100188331
134 Ga0068870_10007175
135 Ga0068863_100030418
136 Ga0068858_100182002
137 Ga0068860_100039389
138 Ga0068860_100137707
139 Ga0081455_10050790
140 Ga0081539_10016894
141 Ga0075365_10051700
142 Ga0075366_10027493
143 Ga0075433_10001184
144 Ga0075434_100266528
145 Ga0075429_100262641
146 Ga0097620_100069421
147 Ga0097620_100162980
148 Ga0097620_100188333
149 Ga0105240_10198637
150 Ga0114129_10183608
151 Ga0105239_10202366
152 Ga0157373_10017651
153 Ga0157370_10053564
154 Ga0157369_10119263
155 Ga0157374_10234264
156 Ga0157378_10136350
157 Ga0182008_10000160
158 Ga0207682_10002502
159 Ga0207645_10018566
160 Ga0207643_10008390
161 Ga0207705_10089891
162 Ga0207707_10019809
163 Ga0207707_10325129
164 Ga0207670_10001810
165 Ga0207667_10223996
166 Ga0207667_10336382
167 Ga0207641_10016787
168 Ga0207698_10085591
169 Ga0268264_10267187
170 Ga0265327_10005926
171 Ga0265316_10023069
172 Ga0265316_10034376
173 Ga0265316_10092329
174 Ga0307513_10007030
175 Ga0307509_10276595
176 Ga0316576_10143726
177 Ga0307516_10002629
178 Ga0307413_10015722
179 Ga0307412_10000210
180 Ga0307409_100260226
181 Ga0307414_10009105
182 Ga0307411_10000492
183 Ga0400484_09828
184 Ga0400491_11441
185 Ga0400486_07368
186 Ga0400487_18976
187 Ga0453684_0013816
188 Ga0451576_0009322
189 Ga0495591_007486
190 Ga0495650_0000020
191 Ga0495605_0000106
192 Ga0495616_0000460
193 Ga0495620_0028690
194 Ga0495654_0000109
195 Ga0495625_0001046
196 Ga0495624_0190227
197 Ga0495674_0156018
198 Ga0495673_0000296
199 Ga0496122_0083783
200 Ga0496124_0002891
201 Ga0496125_0009719
202 Ga0501034_0178468
203 Ga0501034_0366685
204 Ga0501040_0010326
205 Ga0501046_0018301
206 Ga0501047_0198644
207 Ga0501070_0023380
208 Ga0501076_0112315
209 Ga0501238_002852
210 Ga0501035_0003897
211 Ga0501044_0014453
212 nmdc:mga00v17_159541_c1
213 nmdc:mga0yw44_15491_c2
214 nmdc:mga0k408_2850_c1
215 nmdc:mga09592_250892_c1
216 nmdc:mga0n895_266203_c1
217 nmdc:mga0a205_286_c1
218 nmdc:mga0a205_364751_c1
219 Ga0500564_000064
220 Ga0500616_0004941
221 Ga0500627_0000181
222 Ga0501084_0068748
223 Ga0530510_0002760
224 Ga0530510_0035196
225 2501082169
226 2511086483
227 2644337713
228 2787507889
229 2889421655
230 2924226944
231 2928118279
232 2967708273
233 2970142938
234 8055268234

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01661

Macro

Macro domain

18

131

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5m3i-assembly2.cif.gz_B macrodomain of mycobacterium tuberculosis darg 0.983 1 150
5m31-assembly1.cif.gz_A macrodomain of thermus aquaticus darg 0.9795 1 149
5m3i-assembly2.cif.gz_B macrodomain of mycobacterium tuberculosis darg 0.964 1 150
5m31-assembly1.cif.gz_A macrodomain of thermus aquaticus darg 0.9604 1 149
7yk3-assembly2.cif.gz_D crystal structure of dartg toxin-antitoxin complex from mycobacterium tuberculosis 0.9143 168 340
ID Description Score Start End Superfamily
af_O53605_1_147_3.40.220.10 Alpha Beta;3-Layer(aba) Sandwich;Leucine Aminopeptidase, subunit E; domain 1;Leucine Aminopeptidase, subunit E, domain 1 0.9881 1 147 3.40.220.10
af_O53605_1_147_3.40.220.10 Alpha Beta;3-Layer(aba) Sandwich;Leucine Aminopeptidase, subunit E; domain 1;Leucine Aminopeptidase, subunit E, domain 1 0.9814 1 147 3.40.220.10
af_Q961L8_1_145_3.40.220.10 Alpha Beta;3-Layer(aba) Sandwich;Leucine Aminopeptidase, subunit E; domain 1;Leucine Aminopeptidase, subunit E, domain 1 0.8451 2 146 3.40.220.10
af_Q8IPU1_23_158_3.40.220.10 Alpha Beta;3-Layer(aba) Sandwich;Leucine Aminopeptidase, subunit E; domain 1;Leucine Aminopeptidase, subunit E, domain 1 0.8373 7 142 3.40.220.10
af_A0A2R8Q9E4_958_1170_3.40.220.10 Alpha Beta;3-Layer(aba) Sandwich;Leucine Aminopeptidase, subunit E; domain 1;Leucine Aminopeptidase, subunit E, domain 1 0.8266 2 148 3.40.220.10
ID Description Score Start End GO Terms
AF-A0A2U2API7-F1-model_v4 Macro domain-containing protein 0.9937 1 109 GO:0140291
AF-A0A356EVX5-F1-model_v4 Appr-1-p processing protein 0.9919 1 129 GO:0140291
AF-A0A359LSU7-F1-model_v4 Appr-1-p processing protein 0.9904 1 145 GO:0140291
AF-A0A1H6FAR2-F1-model_v4 Appr-1-p processing protein 0.9896 168 346 GO:0140291
AF-A0A524Q9V0-F1-model_v4 Appr-1-p processing protein 0.9896 1 88 GO:0140291

Map