F092274

General Info

Members Datasets Scaffolds Average Seq Length
117 103 234 494

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100000180|Ga0070716_1000001802
Length 552
Sequence MLVVANVVMAAIKIALTRLMAPECSTLAGSSFWAIMERLLLLRESNDEVTLTGSEHFDVVIIGAGLSGIGAGYRLQTRCPGKSYVILEARADIGGTWDLFRYPGIRSDSDMATFSFPFRPWKESRVLADGPSILKYLRETAQEFGIDRHFRFRQRVLSASWSSDNAQWTLEVQGENGQILRYSCDFLYGCTGYYRYDAGYEPTFPSQEHFSGQIIHPQHWPENLDYAGKKVVVVGSGATAVTLIPAMADTAAHITMLQRSPGYMLSLPSHDPLANMLKRVLPQSIAFRLVRWKNILVSIGIYQISRRAPNFARGVLRTIAVKDLPQGYEVDKHFKPSYQPWDQRLCVMPDSDFYKTINAGRASVVTGEIETFTERSIRLKSGEELEADIIVTATGLRMLALGAVQLVIDGTPINPGREFIYKGTMLSNIPNFAFCIGYTNAAWTLRADLASTYVCRVLNHMDRHGYRTCRPTCESASLEARPLLGLTSGYVMRSAADLPKSATRAPWLIRQNYIRDMLTMKVGRLEDGVLTFSKTAALTRADIAEEVRAAGD

Samples

Sample ID Description Type Environment
1 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
34 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
48 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
60 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
69 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
70 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
71 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
72 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
73 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
76 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
77 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
78 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
79 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
80 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
81 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
87 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
88 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
89 2547132424 Nocardia nova SH22a Isolate Unclassified
90 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
91 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
92 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
93 2643221641 Nocardioides sp. Root122 Isolate Unclassified
94 2643221692 Nocardia sp. Root136 Isolate Unclassified
95 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
96 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
97 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
98 2842805378 Pseudomonas sp. R-72599 Isolate Unclassified
99 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
100 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
101 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
102 2922554459 Rhodococcus sp. 66b Isolate Unclassified
103 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.32
Metatranscriptomes 0
Isolates 13.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.27
Nodule 0
Rhizoplane 0.85
Rhizosphere 81.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070716_100000180 3300006173 Bacteria 24797
2 LJQas_1002147 3300000549 Bacteria 2789
3 Ga0055540_1000068 3300003792 Bacteria 120413
4 Ga0070683_100017523 3300005329 Bacteria 6331
5 Ga0070668_100028708 3300005347 Bacteria 4221
6 Ga0070669_100034759 3300005353 Bacteria 3649
7 Ga0070667_100055290 3300005367 Bacteria 3352
8 Ga0070709_10000896 3300005434 Bacteria 16645
9 Ga0070713_100000243 3300005436 Bacteria 35877
10 Ga0070711_100063645 3300005439 Bacteria 2575
11 Ga0070700_100001896 3300005441 Bacteria 10568
12 Ga0070662_100001858 3300005457 Bacteria 12936
13 Ga0070698_100021530 3300005471 Bacteria 6752
14 Ga0070696_100099334 3300005546 Bacteria 2083
15 Ga0068856_100001015 3300005614 Bacteria 29886
16 Ga0068856_100247313 3300005614 Bacteria 1799
17 Ga0070702_100051064 3300005615 Bacteria 2366
18 Ga0068859_100005947 3300005617 Bacteria 12385
19 Ga0068858_100044384 3300005842 Bacteria 4120
20 Ga0068862_100093705 3300005844 Bacteria 2619
21 Ga0081539_10028329 3300005985 Bacteria 3524
22 Ga0081539_10038612 3300005985 Bacteria 2827
23 Ga0070717_10064597 3300006028 Bacteria 3040
24 Ga0075365_10002325 3300006038 Bacteria 9250
25 Ga0075363_100025576 3300006048 Bacteria 3012
26 Ga0070712_100000002 3300006175 Bacteria 288475
27 Ga0070712_100000103 3300006175 Bacteria 43249
28 Ga0075433_10091525 3300006852 Bacteria 2689
29 Ga0105245_10004199 3300009098 Bacteria 12789
30 Ga0105237_10039453 3300009545 Bacteria 4767
31 Ga0105249_10000408 3300009553 Bacteria 41235
32 Ga0105239_10094720 3300010375 Bacteria 3298
33 Ga0157370_10000070 3300013104 Bacteria 112014
34 Ga0163162_10241869 3300013306 Bacteria 1936
35 Ga0157372_10087801 3300013307 Bacteria 3529
36 Ga0213872_10005402 3300021361 Bacteria 6583
37 Ga0207699_10002129 3300025906 Bacteria 9364
38 Ga0207693_10000653 3300025915 Bacteria 31074
39 Ga0207693_10119637 3300025915 Bacteria 2068
40 Ga0207663_10085459 3300025916 Bacteria 2077
41 Ga0207687_10102245 3300025927 Bacteria 2111
42 Ga0207700_10000146 3300025928 Bacteria 41769
43 Ga0207706_10000575 3300025933 Bacteria 39106
44 Ga0207709_10026514 3300025935 Bacteria 3330
45 Ga0207665_10008508 3300025939 Bacteria 6756
46 Ga0207668_10003780 3300025972 Bacteria 8918
47 Ga0207708_10017315 3300026075 Bacteria 5425
48 Ga0207702_10001068 3300026078 Bacteria 28056
49 Ga0207675_100002676 3300026118 Bacteria 17573
50 Ga0265327_10000001 3300031251 Bacteria 894475
51 Ga0307410_10121616 3300031852 Bacteria 1904
52 Ga0307406_10149213 3300031901 Bacteria 1666
53 Ga0307409_100026467 3300031995 Bacteria 4091
54 Ga0307409_100056695 3300031995 Bacteria 3031
55 Ga0307409_100085232 3300031995 Bacteria 2568
56 Ga0307416_100144772 3300032002 Bacteria 2167
57 Ga0307416_100293911 3300032002 Bacteria 1610
58 Ga0307411_10130117 3300032005 Bacteria 1838
59 Ga0307415_100002712 3300032126 Bacteria 8840
60 Ga0307415_100024796 3300032126 Bacteria 3753
61 Ga0307415_100096063 3300032126 Bacteria 2159
62 Ga0373931_0030591 3300035691 Bacteria 2773
63 Ga0395900_0012181 3300037418 Bacteria 8792
64 Ga0395900_0019196 3300037418 Bacteria 6970
65 Ga0395898_0230145 3300037466 Bacteria 1768
66 Ga0436364_0021537 3300037853 Bacteria 2638
67 Ga0395901_0112362 3300038443 Bacteria 2861
68 Ga0436365_0573718 3300039437 Bacteria 1857
69 Ga0436361_0302074 3300039447 Bacteria 152020
70 Ga0466972_0005364 3300044658 Bacteria 6421
71 Ga0466966_0035261 3300044684 Bacteria 3233
72 Ga0466963_0031536 3300044694 Bacteria 3427
73 Ga0466963_0033385 3300044694 Bacteria 3340
74 Ga0466963_0044832 3300044694 Bacteria 2911
75 Ga0466968_0004101 3300044735 Bacteria 5425
76 Ga0466957_0111135 3300044842 Bacteria 1738
77 Ga0466960_0015585 3300044901 Bacteria 3279
78 Ga0466960_0051954 3300044901 Bacteria 1982
79 Ga0466967_0034883 3300045976 Bacteria 4275
80 Ga0495606_0000293 3300046507 Bacteria 86455
81 Ga0495643_0001538 3300046522 Bacteria 20660
82 Ga0495640_0009609 3300046533 Bacteria 7523
83 Ga0495645_0005918 3300046543 Bacteria 8450
84 Ga0495667_0000034 3300046559 Bacteria 141464
85 Ga0495668_0008146 3300046616 Bacteria 6588
86 Ga0495649_0000241 3300046694 Bacteria 48093
87 Ga0495674_0000019 3300047319 Bacteria 185107
88 Ga0495680_0001373 3300047322 Bacteria 26354
89 Ga0495683_0002516 3300047323 Bacteria 11015
90 Ga0495684_0031372 3300047471 Bacteria 4080
91 Ga0496104_0000004 3300048907 Bacteria 641830
92 Ga0496119_0000061 3300048922 Bacteria 171442
93 Ga0496120_0009055 3300048923 Bacteria 7111
94 Ga0496126_0037439 3300048929 Bacteria 4527
95 Ga0501036_0181996 3300049572 Bacteria 1769
96 Ga0501039_0089484 3300049575 Bacteria 2399
97 Ga0501042_0016206 3300049578 Bacteria 5113
98 Ga0501072_0148201 3300049588 Bacteria 1871
99 nmdc:mga0yw44_13009_c1 3300050492 Bacteria 4363
100 Ga0500573_0006778 3300053140 Bacteria 6216
101 Ga0466962_0051331 3300061719 Bacteria 1971
102 2548696309 2547132424 Bacteria 8348532
103 2548697440 2547132424 Bacteria 8348532
104 2552108293 2551306166 Bacteria 9731570
105 2558906090 2558860112 Bacteria 9931328
106 2566993311 2565956761 Bacteria 6601618
107 2644228101 2643221641 Bacteria 4490190
108 2644512052 2643221692 Bacteria 7282860
109 2744956082 2744054611 Bacteria 5611514
110 2809197204 2808606439 Bacteria 5952208
111 2817508750 2816332305 Bacteria 2697803
112 2842805832 2842805378 Bacteria 5385175
113 2842892028 2842888712 Bacteria 4279094
114 2904537075 2904535858 Bacteria 6308016
115 2919713813 2919713450 Bacteria 7431245
116 2922559705 2922554459 Bacteria 6683962
117 8047714515 8047710418 Bacteria 11023148
118 Ga0070716_100000180
119 LJQas_1002147
120 Ga0055540_1000068
121 Ga0070683_100017523
122 Ga0070668_100028708
123 Ga0070669_100034759
124 Ga0070667_100055290
125 Ga0070709_10000896
126 Ga0070713_100000243
127 Ga0070711_100063645
128 Ga0070700_100001896
129 Ga0070662_100001858
130 Ga0070698_100021530
131 Ga0070696_100099334
132 Ga0068856_100001015
133 Ga0068856_100247313
134 Ga0070702_100051064
135 Ga0068859_100005947
136 Ga0068858_100044384
137 Ga0068862_100093705
138 Ga0081539_10028329
139 Ga0081539_10038612
140 Ga0070717_10064597
141 Ga0075365_10002325
142 Ga0075363_100025576
143 Ga0070712_100000002
144 Ga0070712_100000103
145 Ga0075433_10091525
146 Ga0105245_10004199
147 Ga0105237_10039453
148 Ga0105249_10000408
149 Ga0105239_10094720
150 Ga0157370_10000070
151 Ga0163162_10241869
152 Ga0157372_10087801
153 Ga0213872_10005402
154 Ga0207699_10002129
155 Ga0207693_10000653
156 Ga0207693_10119637
157 Ga0207663_10085459
158 Ga0207687_10102245
159 Ga0207700_10000146
160 Ga0207706_10000575
161 Ga0207709_10026514
162 Ga0207665_10008508
163 Ga0207668_10003780
164 Ga0207708_10017315
165 Ga0207702_10001068
166 Ga0207675_100002676
167 Ga0265327_10000001
168 Ga0307410_10121616
169 Ga0307406_10149213
170 Ga0307409_100026467
171 Ga0307409_100056695
172 Ga0307409_100085232
173 Ga0307416_100144772
174 Ga0307416_100293911
175 Ga0307411_10130117
176 Ga0307415_100002712
177 Ga0307415_100024796
178 Ga0307415_100096063
179 Ga0373931_0030591
180 Ga0395900_0012181
181 Ga0395900_0019196
182 Ga0395898_0230145
183 Ga0436364_0021537
184 Ga0395901_0112362
185 Ga0436365_0573718
186 Ga0436361_0302074
187 Ga0466972_0005364
188 Ga0466966_0035261
189 Ga0466963_0031536
190 Ga0466963_0033385
191 Ga0466963_0044832
192 Ga0466968_0004101
193 Ga0466957_0111135
194 Ga0466960_0015585
195 Ga0466960_0051954
196 Ga0466967_0034883
197 Ga0495606_0000293
198 Ga0495643_0001538
199 Ga0495640_0009609
200 Ga0495645_0005918
201 Ga0495667_0000034
202 Ga0495668_0008146
203 Ga0495649_0000241
204 Ga0495674_0000019
205 Ga0495680_0001373
206 Ga0495683_0002516
207 Ga0495684_0031372
208 Ga0496104_0000004
209 Ga0496119_0000061
210 Ga0496120_0009055
211 Ga0496126_0037439
212 Ga0501036_0181996
213 Ga0501039_0089484
214 Ga0501042_0016206
215 Ga0501072_0148201
216 nmdc:mga0yw44_13009_c1
217 Ga0500573_0006778
218 Ga0466962_0051331
219 2548696309
220 2548697440
221 2552108293
222 2558906090
223 2566993311
224 2644228101
225 2644512052
226 2744956082
227 2809197204
228 2817508750
229 2842805832
230 2842892028
231 2904537075
232 2919713813
233 2922559705
234 8047714515

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

61

129

0.91

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

60

270

0.78

PF00743

FMO-like

Flavin-binding monooxygenase-like

57

401

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gv0-assembly1.cif.gz_A-2 structural basis for thermophilic protein stability: structures of thermophilic and mesophilic malate dehydrogenases 0.8859 11 45
3tdk-assembly1.cif.gz_C crystal structure of human udp-glucose dehydrogenase 0.8669 9 44
4rg4-assembly1.cif.gz_A epsilon-caprolactone-bound crystal structure of cyclohexanone monooxygenase in the loose conformation 0.8454 8 425
7v51-assembly1.cif.gz_A bvmo_negative mutant d432v 0.8451 10 422
6era-assembly1.cif.gz_A crystal structure of cyclohexanone monooxygenase mutant (f249a, f280a and f435a) from rhodococcus sp. phi1 bound to nadp+ 0.8436 7 425
ID Description Score Start End Superfamily
af_P9WNF9_1_152_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9901 7 155 3.50.50.60
af_O53762_6_249_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9829 6 246 3.50.50.60
af_P9WNF7_1_267_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9825 7 263 3.50.50.60
af_Q2G1C4_148_305_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9708 11 40 3.40.50.720
af_O53762_6_249_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.967 6 246 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A1H0E3A0-F1-model_v4 Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD 0.9952 7 482 GO:0004499
GO:0050660
GO:0050661
AF-A0A0Q6TSJ7-F1-model_v4 FAD-containing monooxygenase EthA 0.9924 7 482 GO:0004499
GO:0050660
GO:0050661
AF-A0A2T9JDK5-F1-model_v4 FAD-containing monooxygenase EthA 0.9921 7 481 GO:0004499
GO:0050660
GO:0050661
AF-A4YYE0-F1-model_v4 Putative Flavin-containing monooxygenase (EC 1.14.-.-) 0.9915 7 482 GO:0004499
GO:0050660
GO:0050661
AF-A0A0Q7TRL4-F1-model_v4 FAD-containing monooxygenase EthA 0.9908 7 482 GO:0004499
GO:0050660
GO:0050661

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