F084644

General Info

Members Datasets Scaffolds Average Seq Length
115 91 230 378

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0146319|Ga0395901_0146319_1039_2280
Length 413
Sequence MTITSGDRASGLEPGGAHAMERLNVMKPWVGTEEANALADVIASGWLAQGPRVAEFERAFAKAQGVLNGVAASSCTTALHLALLVAGVKPGDEVVVPSFSFVATANAPLYVGAEPVFADVDPMTGNVTAETVAQVIGPRTTAVIVVDQGGLPADVSPIAELCEARGIKLIEDAACAAGSRYRGKPVGVGADIAAWSFHPRKLLTTGEGGMLTTDRDDWAARAKRLRQHAASVSAAERHEAVRAPAEAYTELGFNFRMTDLQAAIGIVQLRRLPAMVERRRALAALYRDLLDGVPGLRFVEDPPQGESNFQSFWAEVGEGFPLTRDELLDALAEDGISARSGIMASHLEPAFADRPLRVPLPVTERLNAGTLIFPLYHELSEEGVERVADAVVRASKKPGANTMRDKKPKASPR

Samples

Sample ID Description Type Environment
1 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
25 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
26 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
27 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
28 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
29 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
42 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
43 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
44 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
45 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
46 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
47 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
50 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
51 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
56 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
57 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
58 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
59 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
60 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
61 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
62 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
63 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
64 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
65 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
66 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
67 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
68 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
69 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
70 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
71 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
72 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
73 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
74 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
75 2643221575 Microbacterium sp. Root61 Isolate Unclassified
76 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
77 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
78 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
79 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
80 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
81 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
82 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
83 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
84 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
85 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
86 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
87 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
88 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
89 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
90 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
91 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.61
Metatranscriptomes 0
Isolates 17.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.61
Nodule 12.17
Rhizoplane 4.35
Rhizosphere 73.91
Stem 0
Stem Tuber 0
Unclassified 1.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395901_0146319 3300038443 Bacteria 2483
2 JGI25153J46596_10017286 3300003215 Bacteria 2846
3 Ga0070658_10208179 3300005327 Bacteria 1652
4 Ga0070683_100047959 3300005329 Bacteria 3948
5 Ga0070683_100088633 3300005329 Bacteria 2903
6 Ga0070680_100260917 3300005336 Bacteria 1466
7 Ga0070680_100261448 3300005336 Bacteria 1464
8 Ga0070674_100183566 3300005356 Bacteria 1604
9 Ga0070713_100043647 3300005436 Bacteria 3667
10 Ga0070708_100076577 3300005445 Bacteria 3021
11 Ga0068867_100034441 3300005459 Bacteria 3670
12 Ga0070685_10027108 3300005466 Bacteria 3164
13 Ga0070706_100000291 3300005467 Bacteria 60857
14 Ga0070706_100001592 3300005467 Bacteria 23675
15 Ga0070707_100000914 3300005468 Bacteria 29251
16 Ga0070707_100002246 3300005468 Bacteria 18427
17 Ga0070698_100003321 3300005471 Bacteria 17694
18 Ga0070698_100005675 3300005471 Bacteria 13664
19 Ga0070699_100000064 3300005518 Bacteria 99951
20 Ga0070684_100002123 3300005535 Bacteria 14623
21 Ga0070664_100023566 3300005564 Bacteria 5085
22 Ga0068856_100002629 3300005614 Bacteria 18448
23 Ga0068866_10038772 3300005718 Unclassified 2349
24 Ga0068861_100309675 3300005719 Bacteria 1371
25 Ga0070717_10003758 3300006028 Bacteria 10900
26 Ga0075431_100048246 3300006847 Bacteria 4392
27 Ga0114129_10007501 3300009147 Bacteria 15535
28 Ga0163163_10475863 3300014325 Bacteria 1310
29 Ga0214544_1002301 3300021320 Bacteria 40298
30 Ga0214542_1002324 3300021321 Bacteria 39310
31 Ga0214545_1001909 3300021324 Bacteria 39789
32 Ga0214543_1002084 3300021327 Bacteria 39310
33 Ga0209758_1003139 3300025297 Bacteria 15550
34 Ga0207642_10007638 3300025899 Unclassified 3661
35 Ga0207705_10204235 3300025909 Bacteria 1497
36 Ga0207684_10000019 3300025910 Bacteria 353902
37 Ga0207684_10005209 3300025910 Bacteria 12086
38 Ga0207660_10157972 3300025917 Bacteria 1747
39 Ga0207646_10000560 3300025922 Bacteria 48923
40 Ga0207646_10005434 3300025922 Bacteria 13405
41 Ga0207709_10284558 3300025935 Bacteria 1222
42 Ga0207661_10000354 3300025944 Bacteria 29533
43 Ga0207661_10045610 3300025944 Bacteria 3471
44 Ga0207679_10040393 3300025945 Bacteria 3339
45 Ga0207678_10059464 3300026067 Bacteria 3288
46 Ga0207702_10004207 3300026078 Bacteria 12861
47 Ga0207648_10018144 3300026089 Bacteria 6373
48 Ga0207674_10033313 3300026116 Bacteria 5394
49 Ga0265339_10005885 3300031249 Bacteria 8125
50 Ga0307410_10029038 3300031852 Bacteria 3516
51 Ga0307410_10080296 3300031852 Bacteria 2288
52 Ga0307409_100088354 3300031995 Bacteria 2530
53 Ga0307416_100146837 3300032002 Bacteria 2155
54 Ga0307414_10307027 3300032004 Bacteria 1345
55 Ga0307415_100072649 3300032126 Bacteria 2424
56 Ga0395900_0000802 3300037418 Bacteria 41556
57 Ga0395900_0058588 3300037418 Bacteria 3965
58 Ga0395900_0114022 3300037418 Bacteria 2774
59 Ga0395900_0173167 3300037418 Bacteria 2196
60 Ga0395898_0001131 3300037466 Bacteria 40950
61 Ga0395898_0005195 3300037466 Bacteria 14076
62 Ga0395898_0012498 3300037466 Bacteria 8778
63 Ga0395898_0047489 3300037466 Bacteria 4213
64 Ga0395905_0001052 3300037471 Bacteria 34866
65 Ga0395905_0093398 3300037471 Bacteria 2822
66 Ga0395905_0097737 3300037471 Bacteria 2757
67 Ga0395901_0004186 3300038443 Bacteria 14559
68 Ga0395901_0004854 3300038443 Bacteria 13571
69 Ga0395901_0066258 3300038443 Bacteria 3762
70 Ga0395901_0115403 3300038443 Bacteria 2821
71 Ga0395901_0138555 3300038443 Bacteria 2557
72 Ga0395901_0149015 3300038443 Bacteria 2459
73 Ga0436360_0702113 3300039438 Bacteria 3995
74 Ga0451577_0119346 3300042876 Bacteria 2362
75 Ga0466961_0236915 3300044693 Bacteria 1122
76 Ga0453684_0029232 3300044712 Archaea 7837
77 Ga0466967_0000349 3300045976 Bacteria 21303
78 Ga0495638_0000727 3300046460 Bacteria 35457
79 Ga0495594_0143082 3300046499 Bacteria 1357
80 Ga0495645_0083475 3300046543 Bacteria 2290
81 Ga0495588_0029406 3300046674 Bacteria 2756
82 Ga0495674_0180376 3300047319 Bacteria 1759
83 Ga0495673_0048221 3300047469 Bacteria 1879
84 Ga0496100_0160919 3300048903 Bacteria 1609
85 Ga0496103_0084877 3300048906 Bacteria 1995
86 Ga0496106_0013928 3300048909 Bacteria 5946
87 Ga0496113_0103934 3300048916 Bacteria 2204
88 Ga0496115_0301829 3300048918 Bacteria 1312
89 Ga0496126_0032752 3300048929 Bacteria 4893
90 Ga0501081_0214423 3300049743 Bacteria 1399
91 Ga0501044_0242620 3300049823 Bacteria 1745
92 nmdc:mga05p37_1032_c1 3300050507 Bacteria 31765
93 nmdc:mga06r32_59724_c1 3300050510 Bacteria 3668
94 nmdc:mga06r32_896_c1 3300050510 Bacteria 26535
95 Ga0500568_0001490 3300053139 Bacteria 14967
96 2515630293 2515154112 Bacteria 8294334
97 2596372921 2595698237 Bacteria 6712432
98 2617378329 2617270741 Bacteria 8201522
99 2643888462 2643221575 Bacteria 4022601
100 2824748306 2824746037 Bacteria 7911610
101 2879128659 2879127579 Bacteria 8294491
102 2879143998 2879142872 Bacteria 8267021
103 2883821960 2883821847 Bacteria 5121194
104 2908779087 2908775508 Bacteria 8092255
105 2919447967 2919446982 Bacteria 3994487
106 2928125718 2928125067 Bacteria 5937560
107 2935780446 2935777560 Bacteria 8077691
108 2935983275 2935975950 Bacteria 8347125
109 2946043611 2946041624 Bacteria 4191385
110 3003668773 3003665799 Bacteria 7279786
111 3005489931 3005483717 Bacteria 7877331
112 8016604344 8016603502 Bacteria 8731218
113 8016620924 8016613128 Bacteria 8794220
114 8016639712 8016630954 Bacteria 9217207
115 8019646023 8019638758 Bacteria 9062356
116 Ga0395901_0146319
117 JGI25153J46596_10017286
118 Ga0070658_10208179
119 Ga0070683_100047959
120 Ga0070683_100088633
121 Ga0070680_100260917
122 Ga0070680_100261448
123 Ga0070674_100183566
124 Ga0070713_100043647
125 Ga0070708_100076577
126 Ga0068867_100034441
127 Ga0070685_10027108
128 Ga0070706_100000291
129 Ga0070706_100001592
130 Ga0070707_100000914
131 Ga0070707_100002246
132 Ga0070698_100003321
133 Ga0070698_100005675
134 Ga0070699_100000064
135 Ga0070684_100002123
136 Ga0070664_100023566
137 Ga0068856_100002629
138 Ga0068866_10038772
139 Ga0068861_100309675
140 Ga0070717_10003758
141 Ga0075431_100048246
142 Ga0114129_10007501
143 Ga0163163_10475863
144 Ga0214544_1002301
145 Ga0214542_1002324
146 Ga0214545_1001909
147 Ga0214543_1002084
148 Ga0209758_1003139
149 Ga0207642_10007638
150 Ga0207705_10204235
151 Ga0207684_10000019
152 Ga0207684_10005209
153 Ga0207660_10157972
154 Ga0207646_10000560
155 Ga0207646_10005434
156 Ga0207709_10284558
157 Ga0207661_10000354
158 Ga0207661_10045610
159 Ga0207679_10040393
160 Ga0207678_10059464
161 Ga0207702_10004207
162 Ga0207648_10018144
163 Ga0207674_10033313
164 Ga0265339_10005885
165 Ga0307410_10029038
166 Ga0307410_10080296
167 Ga0307409_100088354
168 Ga0307416_100146837
169 Ga0307414_10307027
170 Ga0307415_100072649
171 Ga0395900_0000802
172 Ga0395900_0058588
173 Ga0395900_0114022
174 Ga0395900_0173167
175 Ga0395898_0001131
176 Ga0395898_0005195
177 Ga0395898_0012498
178 Ga0395898_0047489
179 Ga0395905_0001052
180 Ga0395905_0093398
181 Ga0395905_0097737
182 Ga0395901_0004186
183 Ga0395901_0004854
184 Ga0395901_0066258
185 Ga0395901_0115403
186 Ga0395901_0138555
187 Ga0395901_0149015
188 Ga0436360_0702113
189 Ga0451577_0119346
190 Ga0466961_0236915
191 Ga0453684_0029232
192 Ga0466967_0000349
193 Ga0495638_0000727
194 Ga0495594_0143082
195 Ga0495645_0083475
196 Ga0495588_0029406
197 Ga0495674_0180376
198 Ga0495673_0048221
199 Ga0496100_0160919
200 Ga0496103_0084877
201 Ga0496106_0013928
202 Ga0496113_0103934
203 Ga0496115_0301829
204 Ga0496126_0032752
205 Ga0501081_0214423
206 Ga0501044_0242620
207 nmdc:mga05p37_1032_c1
208 nmdc:mga06r32_59724_c1
209 nmdc:mga06r32_896_c1
210 Ga0500568_0001490
211 2515630293
212 2596372921
213 2617378329
214 2643888462
215 2824748306
216 2879128659
217 2879143998
218 2883821960
219 2908779087
220 2919447967
221 2928125718
222 2935780446
223 2935983275
224 2946043611
225 3003668773
226 3005489931
227 8016604344
228 8016620924
229 8016639712
230 8019646023

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

28

392

0.96

PF00266

Aminotran_5

Aminotransferase class-V

58

387

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bn1-assembly2.cif.gz_C crystal structure of gdp-perosamine synthase 0.9622 2 374
8e75-assembly1.cif.gz_A crystal structure of pcryo_0616, the aminotransferase required to synthesize udp-n-acetyl-3-amino-d-glucosaminuronic acid (udp-glcnac3na) 0.9622 11 371
3dr4-assembly1.cif.gz_A gdp-perosamine synthase k186a mutant from caulobacter crescentus with bound sugar ligand 0.9618 4 374
1mdo-assembly1.cif.gz_A crystal structure of arnb aminotransferase with pyridomine 5' phosphate 0.9566 2 375
8su6-assembly1.cif.gz_B crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form2) 0.9557 2 375
ID Description Score Start End Superfamily
af_Q58466_2_255_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.975 1 254 3.40.640.10
1mdxA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9599 1 254 3.40.640.10
3bn1A02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9555 257 374 3.90.1150.10
4lc3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9524 1 254 3.40.640.10
af_Q58466_2_255_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9523 1 254 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A7V8XW66-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9957 1 153 GO:0000271
GO:0008483
GO:0030170
AF-A0A658NNU7-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9937 36 122 GO:0000271
GO:0008483
GO:0030170
AF-A0A497NW96-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9931 9 148 GO:0000271
GO:0008483
GO:0030170
AF-X0VYK0-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9926 11 151 GO:0000271
GO:0008483
GO:0030170
AF-A0A2M8Q735-F1-model_v4 Aminotransferase DegT 0.9924 10 146 GO:0000271
GO:0008483
GO:0030170

Map