F075051
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 113 | 72 | 226 | 383 |
Family's Representative Sequence
| Representative Sequence | 3300039453|Ga0436362_0257868|Ga0436362_0257868_979_2205 |
| Length | 408 |
| Sequence | MPTHSSGHSAGFGARYRADDGFATRAIRAGQDPCSATGSTIVPIYQTATFTQDAVGVDKGYDYSRTGNPTRLALEQQLADLEGARFGAAFASGMATVLGACSLLRAGDHLVATSDCYGGTYRFFVDVLARWGIETTFADTTDVAAVRAALRPNTALLWIETPTNPLLRLADLRALSALKRPGLVMAVDNTFCSPYFQRPLEFGADVVVHSTTKYVNGHSDVVGGVVVTNDETLFETIAYHQNAVGAVPGPQDCYLTLRGAKTLALRMERHGANALALARWLETRDDVSAVYYPGLASHPDHELAKKQQRGFGGVLSFRVRGGAARAREIARTTRLFNLAVSLGGVESLICVPSEMTHKTVPAERKAELGITPDLLRLSVGLEDVEXXXDDLADTFDATADLVLEGAVA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 2 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 3 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 10 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 11 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 12 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 13 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 14 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 15 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 16 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 18 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 19 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 21 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 22 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 23 | 3300021441 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 | Metagenome | Rhizosphere |
| 24 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 34 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 35 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 36 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 37 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 38 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 39 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 40 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 41 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 42 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 43 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 44 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 45 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 46 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 47 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 48 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 49 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 50 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 51 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 52 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 53 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 54 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 55 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 56 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 57 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 58 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 59 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 60 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 61 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 63 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 64 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 65 | 2738541295 | Bacillus sp. OK085 | Isolate | Unclassified |
| 66 | 2919414237 | Neobacillus niacini 3240 | Isolate | Rhizosphere |
| 67 | 2936361878 | Neobacillus endophyticus BRMEA1 | Isolate | Unclassified |
| 68 | 2977254563 | Bacillus sp. SORGH_AS 510 | Isolate | Unclassified |
| 69 | 2984527788 | Paenibacillus sp. SORGH_AS306 | Isolate | Aerial Root |
| 70 | 2984532647 | Paenibacillus sp. SORGH_AS338 | Isolate | Aerial Root |
| 71 | 2990275345 | Bacillus sp. SLBN-46 | Isolate | Unclassified |
| 72 | 8007371054 | Clostridium sp. YIM B02515 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.27 |
| Metatranscriptomes | 2.65 |
| Isolates | 7.08 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.77 |
| Bulb | 0 |
| Endosphere | 0.88 |
| Nodule | 0 |
| Rhizoplane | 0.88 |
| Rhizosphere | 86.73 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.65 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0436362_0257868 | 3300039453 | Bacteria | 2274 |
| 2 | JGI25406J46586_10029219 | 3300003203 | Bacteria | 2089 |
| 3 | Ga0006562J51391_1017782 | 3300003578 | Bacteria | 1992 |
| 4 | Ga0070683_100020651 | 3300005329 | Bacteria | 5863 |
| 5 | Ga0070691_10000762 | 3300005341 | Bacteria | 12749 |
| 6 | Ga0070691_10001220 | 3300005341 | Bacteria | 10819 |
| 7 | Ga0070714_100015540 | 3300005435 | Bacteria | 6123 |
| 8 | Ga0070663_100009069 | 3300005455 | Bacteria | 6146 |
| 9 | Ga0070684_100058392 | 3300005535 | Bacteria | 3372 |
| 10 | Ga0068855_100000448 | 3300005563 | Bacteria | 50961 |
| 11 | Ga0068855_100037024 | 3300005563 | Bacteria | 5805 |
| 12 | Ga0068854_100000018 | 3300005578 | Bacteria | 136417 |
| 13 | Ga0068854_100001453 | 3300005578 | Bacteria | 14339 |
| 14 | Ga0068856_100007280 | 3300005614 | Bacteria | 10794 |
| 15 | Ga0068856_100120183 | 3300005614 | Bacteria | 2629 |
| 16 | Ga0068852_100075860 | 3300005616 | Bacteria | 2967 |
| 17 | Ga0081539_10001358 | 3300005985 | Bacteria | 42573 |
| 18 | Ga0081539_10019019 | 3300005985 | Bacteria | 4728 |
| 19 | Ga0081539_10095998 | 3300005985 | Bacteria | 1522 |
| 20 | Ga0105251_10046811 | 3300009011 | Bacteria | 2080 |
| 21 | Ga0105248_10001195 | 3300009177 | Bacteria | 29021 |
| 22 | Ga0105238_10223134 | 3300009551 | Bacteria | 1861 |
| 23 | Ga0157371_10192405 | 3300013102 | Bacteria | 1461 |
| 24 | Ga0157370_10285119 | 3300013104 | Bacteria | 1526 |
| 25 | Ga0157374_10126155 | 3300013296 | Bacteria | 2474 |
| 26 | Ga0206356_10649002 | 3300020070 | Bacteria | 7911 |
| 27 | Ga0213872_10013446 | 3300021361 | Bacteria | 3835 |
| 28 | Ga0213875_10000001 | 3300021388 | Bacteria | 2793540 |
| 29 | Ga0213871_10001484 | 3300021441 | Bacteria | 3954 |
| 30 | Ga0207664_10107426 | 3300025929 | Bacteria | 2315 |
| 31 | Ga0207661_10042772 | 3300025944 | Bacteria | 3573 |
| 32 | Ga0207667_10000086 | 3300025949 | Bacteria | 150941 |
| 33 | Ga0207667_10002303 | 3300025949 | Bacteria | 23977 |
| 34 | Ga0207640_10000027 | 3300025981 | Bacteria | 137684 |
| 35 | Ga0207639_10069170 | 3300026041 | Bacteria | 2754 |
| 36 | Ga0207678_10036517 | 3300026067 | Bacteria | 4277 |
| 37 | Ga0207678_10183877 | 3300026067 | Bacteria | 1785 |
| 38 | Ga0207702_10003735 | 3300026078 | Bacteria | 13761 |
| 39 | Ga0207702_10078271 | 3300026078 | Bacteria | 2862 |
| 40 | Ga0207698_10066164 | 3300026142 | Bacteria | 2844 |
| 41 | Ga0268266_10014896 | 3300028379 | Bacteria | 6677 |
| 42 | Ga0265336_10035247 | 3300028666 | Bacteria | 1544 |
| 43 | Ga0265338_10015295 | 3300028800 | Bacteria | 8445 |
| 44 | Ga0265338_10113733 | 3300028800 | Bacteria | 2174 |
| 45 | Ga0265760_10000539 | 3300031090 | Bacteria | 10681 |
| 46 | Ga0265320_10099248 | 3300031240 | Bacteria | 1342 |
| 47 | Ga0265325_10002350 | 3300031241 | Bacteria | 12804 |
| 48 | Ga0265325_10025750 | 3300031241 | Bacteria | 3192 |
| 49 | Ga0265339_10003543 | 3300031249 | Bacteria | 10914 |
| 50 | Ga0265331_10000446 | 3300031250 | Bacteria | 40289 |
| 51 | Ga0265331_10006544 | 3300031250 | Bacteria | 6873 |
| 52 | Ga0265316_10000107 | 3300031344 | Bacteria | 89406 |
| 53 | Ga0265316_10102621 | 3300031344 | Bacteria | 2172 |
| 54 | Ga0307408_100101010 | 3300031548 | Bacteria | 2198 |
| 55 | Ga0265313_10000496 | 3300031595 | Bacteria | 41453 |
| 56 | Ga0265314_10000410 | 3300031711 | Bacteria | 57893 |
| 57 | Ga0265342_10002894 | 3300031712 | Bacteria | 14477 |
| 58 | Ga0265342_10009063 | 3300031712 | Bacteria | 7059 |
| 59 | Ga0307409_100048445 | 3300031995 | Bacteria | 3234 |
| 60 | Ga0316583_10010390 | 3300032133 | Bacteria | 3356 |
| 61 | Ga0395899_0006015 | 3300037312 | Bacteria | 9420 |
| 62 | Ga0395898_0008295 | 3300037466 | Bacteria | 10985 |
| 63 | Ga0395898_0165449 | 3300037466 | Bacteria | 2115 |
| 64 | Ga0436364_0273345 | 3300037853 | Bacteria | 2794207 |
| 65 | Ga0436364_0443990 | 3300037853 | Bacteria | 8562 |
| 66 | Ga0395901_0022583 | 3300038443 | Bacteria | 6449 |
| 67 | Ga0395901_0067936 | 3300038443 | Bacteria | 3713 |
| 68 | Ga0436360_0081031 | 3300039438 | Bacteria | 2150 |
| 69 | Ga0436360_0713317 | 3300039438 | Bacteria | 2681 |
| 70 | Ga0436360_1076923 | 3300039438 | Bacteria | 1468 |
| 71 | Ga0436361_0374092 | 3300039447 | Bacteria | 2638 |
| 72 | Ga0436361_0471938 | 3300039447 | Bacteria | 11189 |
| 73 | Ga0436361_0529834 | 3300039447 | Bacteria | 11289 |
| 74 | Ga0436361_0686581 | 3300039447 | Bacteria | 65096 |
| 75 | Ga0436361_0998883 | 3300039447 | Bacteria | 1928 |
| 76 | Ga0436361_1168697 | 3300039447 | Bacteria | 2025 |
| 77 | Ga0436363_1552734 | 3300039450 | Bacteria | 35712 |
| 78 | Ga0436362_0245715 | 3300039453 | Bacteria | 3762 |
| 79 | Ga0436362_0505572 | 3300039453 | Bacteria | 2133 |
| 80 | Ga0436362_0637793 | 3300039453 | Unclassified | 3767 |
| 81 | Ga0436362_1068665 | 3300039453 | Bacteria | 1877 |
| 82 | Ga0436362_1205827 | 3300039453 | Bacteria | 1972 |
| 83 | Ga0451577_0012393 | 3300042876 | Bacteria | 8008 |
| 84 | Ga0451577_0022096 | 3300042876 | Bacteria | 5812 |
| 85 | Ga0451577_0063009 | 3300042876 | Unclassified | 3306 |
| 86 | Ga0453683_0033985 | 3300044673 | Unclassified | 3215 |
| 87 | Ga0453683_0214703 | 3300044673 | Bacteria | 1222 |
| 88 | Ga0466963_0008959 | 3300044694 | Bacteria | 6007 |
| 89 | Ga0453684_0000328 | 3300044712 | Bacteria | 199181 |
| 90 | Ga0453684_0005203 | 3300044712 | Bacteria | 26128 |
| 91 | Ga0453684_0005297 | 3300044712 | Bacteria | 25730 |
| 92 | Ga0453684_0074875 | 3300044712 | Bacteria | 4259 |
| 93 | Ga0453684_0081587 | 3300044712 | Bacteria | 4033 |
| 94 | Ga0453684_0106050 | 3300044712 | Bacteria | 3425 |
| 95 | Ga0453684_0233683 | 3300044712 | Bacteria | 2121 |
| 96 | Ga0451576_0292667 | 3300045051 | Bacteria | 1702 |
| 97 | Ga0451576_0532203 | 3300045051 | Bacteria | 1235 |
| 98 | Ga0466958_0012682 | 3300045836 | Bacteria | 4779 |
| 99 | Ga0466958_0021888 | 3300045836 | Bacteria | 3739 |
| 100 | Ga0466967_0010995 | 3300045976 | Bacteria | 6826 |
| 101 | Ga0466967_0111247 | 3300045976 | Bacteria | 2517 |
| 102 | Ga0495604_0046150 | 3300047317 | Bacteria | 3397 |
| 103 | Ga0496112_0079284 | 3300048915 | Bacteria | 3248 |
| 104 | Ga0496121_0066246 | 3300048924 | Bacteria | 2934 |
| 105 | Ga0500652_003705 | 3300053131 | Bacteria | 4658 |
| 106 | 2738813956 | 2738541295 | Bacteria | 5730091 |
| 107 | 2919417108 | 2919414237 | Bacteria | 5429133 |
| 108 | 2936361913 | 2936361878 | Bacteria | 5632809 |
| 109 | 2977256500 | 2977254563 | Bacteria | 4828420 |
| 110 | 2984529371 | 2984527788 | Bacteria | 5288478 |
| 111 | 2984535477 | 2984532647 | Bacteria | 5288506 |
| 112 | 2990277373 | 2990275345 | Bacteria | 4887158 |
| 113 | 8007371491 | 8007371054 | Bacteria | 4849201 |
| 114 | Ga0436362_0257868 | |||
| 115 | JGI25406J46586_10029219 | |||
| 116 | Ga0006562J51391_1017782 | |||
| 117 | Ga0070683_100020651 | |||
| 118 | Ga0070691_10000762 | |||
| 119 | Ga0070691_10001220 | |||
| 120 | Ga0070714_100015540 | |||
| 121 | Ga0070663_100009069 | |||
| 122 | Ga0070684_100058392 | |||
| 123 | Ga0068855_100000448 | |||
| 124 | Ga0068855_100037024 | |||
| 125 | Ga0068854_100000018 | |||
| 126 | Ga0068854_100001453 | |||
| 127 | Ga0068856_100007280 | |||
| 128 | Ga0068856_100120183 | |||
| 129 | Ga0068852_100075860 | |||
| 130 | Ga0081539_10001358 | |||
| 131 | Ga0081539_10019019 | |||
| 132 | Ga0081539_10095998 | |||
| 133 | Ga0105251_10046811 | |||
| 134 | Ga0105248_10001195 | |||
| 135 | Ga0105238_10223134 | |||
| 136 | Ga0157371_10192405 | |||
| 137 | Ga0157370_10285119 | |||
| 138 | Ga0157374_10126155 | |||
| 139 | Ga0206356_10649002 | |||
| 140 | Ga0213872_10013446 | |||
| 141 | Ga0213875_10000001 | |||
| 142 | Ga0213871_10001484 | |||
| 143 | Ga0207664_10107426 | |||
| 144 | Ga0207661_10042772 | |||
| 145 | Ga0207667_10000086 | |||
| 146 | Ga0207667_10002303 | |||
| 147 | Ga0207640_10000027 | |||
| 148 | Ga0207639_10069170 | |||
| 149 | Ga0207678_10036517 | |||
| 150 | Ga0207678_10183877 | |||
| 151 | Ga0207702_10003735 | |||
| 152 | Ga0207702_10078271 | |||
| 153 | Ga0207698_10066164 | |||
| 154 | Ga0268266_10014896 | |||
| 155 | Ga0265336_10035247 | |||
| 156 | Ga0265338_10015295 | |||
| 157 | Ga0265338_10113733 | |||
| 158 | Ga0265760_10000539 | |||
| 159 | Ga0265320_10099248 | |||
| 160 | Ga0265325_10002350 | |||
| 161 | Ga0265325_10025750 | |||
| 162 | Ga0265339_10003543 | |||
| 163 | Ga0265331_10000446 | |||
| 164 | Ga0265331_10006544 | |||
| 165 | Ga0265316_10000107 | |||
| 166 | Ga0265316_10102621 | |||
| 167 | Ga0307408_100101010 | |||
| 168 | Ga0265313_10000496 | |||
| 169 | Ga0265314_10000410 | |||
| 170 | Ga0265342_10002894 | |||
| 171 | Ga0265342_10009063 | |||
| 172 | Ga0307409_100048445 | |||
| 173 | Ga0316583_10010390 | |||
| 174 | Ga0395899_0006015 | |||
| 175 | Ga0395898_0008295 | |||
| 176 | Ga0395898_0165449 | |||
| 177 | Ga0436364_0273345 | |||
| 178 | Ga0436364_0443990 | |||
| 179 | Ga0395901_0022583 | |||
| 180 | Ga0395901_0067936 | |||
| 181 | Ga0436360_0081031 | |||
| 182 | Ga0436360_0713317 | |||
| 183 | Ga0436360_1076923 | |||
| 184 | Ga0436361_0374092 | |||
| 185 | Ga0436361_0471938 | |||
| 186 | Ga0436361_0529834 | |||
| 187 | Ga0436361_0686581 | |||
| 188 | Ga0436361_0998883 | |||
| 189 | Ga0436361_1168697 | |||
| 190 | Ga0436363_1552734 | |||
| 191 | Ga0436362_0245715 | |||
| 192 | Ga0436362_0505572 | |||
| 193 | Ga0436362_0637793 | |||
| 194 | Ga0436362_1068665 | |||
| 195 | Ga0436362_1205827 | |||
| 196 | Ga0451577_0012393 | |||
| 197 | Ga0451577_0022096 | |||
| 198 | Ga0451577_0063009 | |||
| 199 | Ga0453683_0033985 | |||
| 200 | Ga0453683_0214703 | |||
| 201 | Ga0466963_0008959 | |||
| 202 | Ga0453684_0000328 | |||
| 203 | Ga0453684_0005203 | |||
| 204 | Ga0453684_0005297 | |||
| 205 | Ga0453684_0074875 | |||
| 206 | Ga0453684_0081587 | |||
| 207 | Ga0453684_0106050 | |||
| 208 | Ga0453684_0233683 | |||
| 209 | Ga0451576_0292667 | |||
| 210 | Ga0451576_0532203 | |||
| 211 | Ga0466958_0012682 | |||
| 212 | Ga0466958_0021888 | |||
| 213 | Ga0466967_0010995 | |||
| 214 | Ga0466967_0111247 | |||
| 215 | Ga0495604_0046150 | |||
| 216 | Ga0496112_0079284 | |||
| 217 | Ga0496121_0066246 | |||
| 218 | Ga0500652_003705 | |||
| 219 | 2738813956 | |||
| 220 | 2919417108 | |||
| 221 | 2936361913 | |||
| 222 | 2977256500 | |||
| 223 | 2984529371 | |||
| 224 | 2984535477 | |||
| 225 | 2990277373 | |||
| 226 | 8007371491 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2nmp-assembly1.cif.gz_A | crystal structure of human cystathionine gamma lyase | 0.971 | 3 | 378 |
| 4ixs-assembly1.cif.gz_B-2 | native structure of xometc at ph 5.2 | 0.9666 | 1 | 379 |
| 6k1l-assembly1.cif.gz_B | e53a mutant of a putative cystathionine gamma-lyase | 0.966 | 1 | 379 |
| 3e6g-assembly1.cif.gz_D | crystal structure of xometc, a cystathionine c-lyase-like protein from xanthomonas oryzae pv.oryzae | 0.9658 | 1 | 376 |
| 6k1n-assembly1.cif.gz_C | plp-bound form of a putative cystathionine gamma-lyase | 0.9656 | 1 | 379 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2nmpB02 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9928 | 248 | 378 | 3.90.1150.10 |
| af_P32929_263_402_3.90.1150.10 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9922 | 248 | 378 | 3.90.1150.10 |
| af_Q2G0V3_247_380_3.90.1150.10 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9772 | 248 | 378 | 3.90.1150.10 |
| 3aczC02 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9697 | 248 | 378 | 3.90.1150.10 |
| 3e6gD01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9649 | 49 | 242 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A529ZDV4-F1-model_v4 | Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.9908 | 83 | 193 |
GO:0003962
GO:0004123 GO:0005737 GO:0008483 GO:0019343 GO:0019346 GO:0030170 |
| AF-A7TBF2-F1-model_v4 | cystathionine gamma-lyase (EC 4.4.1.1) (Gamma-cystathionase) | 0.9869 | 278 | 378 |
GO:0019346
GO:0030170 |
| AF-A0A7C4RIJ0-F1-model_v4 | Cystathionine gamma-synthase family protein | 0.9867 | 222 | 379 |
GO:0004123
GO:0005737 GO:0019343 GO:0019346 GO:0030170 |
| AF-A0A3M1RXG6-F1-model_v4 | PLP-dependent transferase | 0.9865 | 210 | 378 |
GO:0003962
GO:0004123 GO:0005737 GO:0019343 GO:0019346 GO:0030170 |
| AF-A0A356A6E0-F1-model_v4 | deleted | 0.9859 | 217 | 378 |
|