F067754

General Info

Members Datasets Scaffolds Average Seq Length
112 103 224 137

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100074576|Ga0070714_1000745763
Length 158
Sequence MLVVAGTGCGPDATRGRDAVRRTMLKSKIHRATVTQADLHYVGSLTVDAELMEAADLLPGEQVHIVDINNGARLETYVIEGPRGSGIIGINGAAARLVHPGDLVIIISYASLDDAEARAYAPRVVHVDAGNRVLETGSDPAAPVPDTATIRGDAVRIG

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
29 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
49 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
54 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
58 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
59 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
66 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
67 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
68 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
69 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
78 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
82 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
83 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
86 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
87 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
88 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
89 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
90 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
91 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
92 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
93 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
94 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
95 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
96 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
97 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
98 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
99 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
100 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
101 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
102 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
103 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.93
Metatranscriptomes 0.89
Isolates 15.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.46
Nodule 1.79
Rhizoplane 0.89
Rhizosphere 80.36
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100074576 3300005435 Bacteria 2941
2 Ga0070658_10002479 3300005327 Bacteria 15424
3 Ga0070680_100297996 3300005336 Bacteria 1367
4 Ga0070660_100728729 3300005339 Bacteria 832
5 Ga0070668_101097623 3300005347 Bacteria 718
6 Ga0070709_10129306 3300005434 Bacteria 1722
7 Ga0070713_100040229 3300005436 Bacteria 3800
8 Ga0070711_100036206 3300005439 Bacteria 3306
9 Ga0070711_100124900 3300005439 Bacteria 1909
10 Ga0070711_100274145 3300005439 Bacteria 1332
11 Ga0070663_101006174 3300005455 Bacteria 725
12 Ga0070681_10493097 3300005458 Bacteria 1138
13 Ga0070679_100766284 3300005530 Bacteria 908
14 Ga0070684_100350840 3300005535 Bacteria 1357
15 Ga0068864_101042042 3300005618 Bacteria 812
16 Ga0068858_100000001 3300005842 Bacteria 417735
17 Ga0081455_10045681 3300005937 Bacteria 3808
18 Ga0081540_1105421 3300005983 Bacteria 1204
19 Ga0075364_10820659 3300006051 Bacteria 634
20 Ga0070716_100522181 3300006173 Bacteria 880
21 Ga0070716_101490452 3300006173 Bacteria 553
22 Ga0070712_101374775 3300006175 Bacteria 616
23 Ga0075430_100000729 3300006846 Bacteria 25203
24 Ga0105240_10006414 3300009093 Bacteria 17299
25 Ga0105245_10703597 3300009098 Bacteria 1044
26 Ga0114129_10041433 3300009147 Bacteria 6488
27 Ga0105248_10003799 3300009177 Bacteria 16740
28 Ga0157378_10333110 3300013297 Bacteria 1478
29 Ga0157372_10180239 3300013307 Bacteria 2445
30 Ga0163163_10671530 3300014325 Bacteria 1100
31 Ga0157380_10832000 3300014326 Bacteria 943
32 Ga0157379_10000601 3300014968 Bacteria 29070
33 Ga0157376_11290081 3300014969 Bacteria 760
34 Ga0206353_10116174 3300020082 Bacteria 814
35 Ga0207680_10318031 3300025903 Bacteria 1088
36 Ga0207705_10000902 3300025909 Bacteria 24287
37 Ga0207707_10886488 3300025912 Bacteria 738
38 Ga0207695_10036219 3300025913 Bacteria 5336
39 Ga0207693_10117948 3300025915 Bacteria 2084
40 Ga0207660_10249571 3300025917 Bacteria 1400
41 Ga0207652_10498100 3300025921 Bacteria 1097
42 Ga0207687_10703845 3300025927 Bacteria 857
43 Ga0207664_10028678 3300025929 Bacteria 4233
44 Ga0207664_10452309 3300025929 Bacteria 1146
45 Ga0207665_10441704 3300025939 Bacteria 997
46 Ga0207665_10790927 3300025939 Bacteria 749
47 Ga0207711_10000355 3300025941 Bacteria 48706
48 Ga0207668_10436762 3300025972 Bacteria 1114
49 Ga0207658_10800950 3300025986 Bacteria 855
50 Ga0207703_10000007 3300026035 Bacteria 418220
51 Ga0268266_11215670 3300028379 Bacteria 729
52 Ga0268265_10768095 3300028380 Bacteria 937
53 Ga0307513_10002723 3300031456 Bacteria 24327
54 Ga0307509_10119688 3300031507 Bacteria 2614
55 Ga0316576_10004144 3300031727 Bacteria 8650
56 Ga0307416_103450797 3300032002 Bacteria 529
57 Ga0307411_11010513 3300032005 Bacteria 745
58 Ga0373931_0142453 3300035691 Bacteria 1390
59 Ga0373925_0118380 3300037068 Bacteria 2054
60 Ga0395901_0331560 3300038443 Bacteria 1573
61 Ga0436365_1226116 3300039437 Bacteria 660
62 Ga0451837_0290559 3300041494 Bacteria 1329
63 Ga0451853_1557960 3300041512 Bacteria 2056
64 Ga0439442_001166 3300042002 Bacteria 5250
65 Ga0466965_0562181 3300044683 Bacteria 645
66 Ga0466963_0383188 3300044694 Bacteria 991
67 Ga0453684_0333824 3300044712 Bacteria 1714
68 Ga0466957_0394296 3300044842 Bacteria 946
69 Ga0466967_0036299 3300045976 Bacteria 4206
70 Ga0466967_0087565 3300045976 Bacteria 2824
71 Ga0495641_0247302 3300046461 Bacteria 802
72 Ga0495588_0155065 3300046674 Bacteria 1211
73 Ga0495646_0135426 3300046680 Bacteria 1382
74 Ga0495676_0119821 3300047321 Bacteria 1916
75 Ga0495680_0548619 3300047322 Bacteria 779
76 Ga0496105_0442441 3300048908 Bacteria 1027
77 Ga0501033_0365144 3300049570 Bacteria 1010
78 Ga0501034_0711485 3300049571 Bacteria 902
79 Ga0501037_1033933 3300049573 Bacteria 534
80 Ga0501038_0367943 3300049574 Bacteria 1117
81 Ga0501038_0823368 3300049574 Bacteria 689
82 Ga0501042_1045683 3300049578 Bacteria 595
83 Ga0501048_0772635 3300049582 Bacteria 690
84 Ga0501068_0186222 3300049584 Bacteria 1313
85 Ga0501069_0070892 3300049585 Bacteria 1953
86 Ga0501073_0759578 3300049589 Bacteria 668
87 Ga0501080_0138002 3300049742 Bacteria 2256
88 Ga0501044_0011993 3300049823 Bacteria 9390
89 Ga0501044_0822194 3300049823 Bacteria 807
90 nmdc:mga00v17_350702_c1 3300050491 Bacteria 959
91 nmdc:mga00v17_485703_c1 3300050491 Bacteria 801
92 nmdc:mga0qj67_8185_c1 3300050509 Bacteria 7750
93 nmdc:mga06r32_48495_c1 3300050510 Bacteria 4059
94 Ga0500573_0184586 3300053140 Bacteria 1119
95 Ga0500636_0173334 3300053177 Bacteria 1165
96 2554259866 2554235005 Bacteria 6457341
97 2676204818 2675902999 Bacteria 9438463
98 2738890609 2738541308 Bacteria 7020677
99 2772641629 2772190715 Bacteria 6959372
100 2774849393 2773857921 Bacteria 9435764
101 2862709903 2862705112 Bacteria 6563286
102 2867350757 2867346516 Bacteria 7608576
103 2918507995 2918501144 Bacteria 8668083
104 2919526773 2919523602 Bacteria 3788128
105 2946079308 2946072368 Bacteria 8999607
106 2966599219 2966598605 Bacteria 7676064
107 2990049297 2990044586 Bacteria 6603797
108 3003000898 3002998708 Bacteria 11715108
109 8003861688 8003856774 Bacteria 7675274
110 8008490133 8008485437 Bacteria 7198341
111 8025529134 8025524527 Bacteria 7197316
112 8056448232 8056447290 Bacteria 7680491
113 Ga0070714_100074576
114 Ga0070658_10002479
115 Ga0070680_100297996
116 Ga0070660_100728729
117 Ga0070668_101097623
118 Ga0070709_10129306
119 Ga0070713_100040229
120 Ga0070711_100036206
121 Ga0070711_100124900
122 Ga0070711_100274145
123 Ga0070663_101006174
124 Ga0070681_10493097
125 Ga0070679_100766284
126 Ga0070684_100350840
127 Ga0068864_101042042
128 Ga0068858_100000001
129 Ga0081455_10045681
130 Ga0081540_1105421
131 Ga0075364_10820659
132 Ga0070716_100522181
133 Ga0070716_101490452
134 Ga0070712_101374775
135 Ga0075430_100000729
136 Ga0105240_10006414
137 Ga0105245_10703597
138 Ga0114129_10041433
139 Ga0105248_10003799
140 Ga0157378_10333110
141 Ga0157372_10180239
142 Ga0163163_10671530
143 Ga0157380_10832000
144 Ga0157379_10000601
145 Ga0157376_11290081
146 Ga0206353_10116174
147 Ga0207680_10318031
148 Ga0207705_10000902
149 Ga0207707_10886488
150 Ga0207695_10036219
151 Ga0207693_10117948
152 Ga0207660_10249571
153 Ga0207652_10498100
154 Ga0207687_10703845
155 Ga0207664_10028678
156 Ga0207664_10452309
157 Ga0207665_10441704
158 Ga0207665_10790927
159 Ga0207711_10000355
160 Ga0207668_10436762
161 Ga0207658_10800950
162 Ga0207703_10000007
163 Ga0268266_11215670
164 Ga0268265_10768095
165 Ga0307513_10002723
166 Ga0307509_10119688
167 Ga0316576_10004144
168 Ga0307416_103450797
169 Ga0307411_11010513
170 Ga0373931_0142453
171 Ga0373925_0118380
172 Ga0395901_0331560
173 Ga0436365_1226116
174 Ga0451837_0290559
175 Ga0451853_1557960
176 Ga0439442_001166
177 Ga0466965_0562181
178 Ga0466963_0383188
179 Ga0453684_0333824
180 Ga0466957_0394296
181 Ga0466967_0036299
182 Ga0466967_0087565
183 Ga0495641_0247302
184 Ga0495588_0155065
185 Ga0495646_0135426
186 Ga0495676_0119821
187 Ga0495680_0548619
188 Ga0496105_0442441
189 Ga0501033_0365144
190 Ga0501034_0711485
191 Ga0501037_1033933
192 Ga0501038_0367943
193 Ga0501038_0823368
194 Ga0501042_1045683
195 Ga0501048_0772635
196 Ga0501068_0186222
197 Ga0501069_0070892
198 Ga0501073_0759578
199 Ga0501080_0138002
200 Ga0501044_0011993
201 Ga0501044_0822194
202 nmdc:mga00v17_350702_c1
203 nmdc:mga00v17_485703_c1
204 nmdc:mga0qj67_8185_c1
205 nmdc:mga06r32_48495_c1
206 Ga0500573_0184586
207 Ga0500636_0173334
208 2554259866
209 2676204818
210 2738890609
211 2772641629
212 2774849393
213 2862709903
214 2867350757
215 2918507995
216 2919526773
217 2946079308
218 2966599219
219 2990049297
220 3003000898
221 8003861688
222 8008490133
223 8025529134
224 8056448232

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02261

Asp_decarbox

Aspartate decarboxylase

20

134

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6oz8-assembly1.cif.gz_D crystal structure of mtb aspartate decarboxylase in active form 0.9916 27 116
1pyq-assembly1.cif.gz_A unprocessed aspartate decarboxylase mutant, with alanine inserted at position 24 0.9884 1 114
1pt1-assembly1.cif.gz_A unprocessed pyruvoyl dependent aspartate decarboxylase with histidine 11 mutated to alanine 0.9883 1 114
2c45-assembly1.cif.gz_C native precursor of pyruvoyl dependent aspartate decarboxylase 0.9881 1 113
6p1y-assembly1.cif.gz_B crystal structure of mtb aspartate decarboxylase mutant m117i 0.9855 27 126
ID Description Score Start End Superfamily
2c45C00 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.9881 1 113 2.40.40.20
2eeoB00 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.9848 27 120 2.40.40.20
4aonE00 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.9821 26 114 2.40.40.20
2c45C00 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.9711 1 113 2.40.40.20
1pqhA00 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.9694 1 116 2.40.40.20
ID Description Score Start End GO Terms
AF-X8ALW7-F1-model_v4 deleted 1.005 1 100
AF-A0A4Q4CZT1-F1-model_v4 Aspartate 1-decarboxylase (EC 4.1.1.11) 1.004 1 95 GO:0004068
GO:0005829
GO:0006523
GO:0015940
AF-A0A1Y0BY55-F1-model_v4 Aspartate 1-decarboxylase (EC 4.1.1.11) (Aspartate alpha-decarboxylase) [Cleaved into: Aspartate 1-decarboxylase beta chain; Aspartate 1-decarboxylase alpha chain] 1.003 1 124 GO:0004068
GO:0005829
GO:0006523
GO:0015940
AF-A0A150RXD4-F1-model_v4 Aspartate 1-decarboxylase (EC 4.1.1.11) 1.003 1 99 GO:0004068
GO:0005829
GO:0006523
GO:0015940
AF-A0A124FIJ7-F1-model_v4 Aspartate 1-decarboxylase (EC 4.1.1.11) 1.003 5 91 GO:0004068
GO:0005829
GO:0006523
GO:0015940

Map