F065502

General Info

Members Datasets Scaffolds Average Seq Length
111 45 111 284

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0000115|Ga0451576_0000115_81764_82645
Length 293
Sequence MPELSPEILAAYRAQTFHLSPAPRLQNPDEALTWVNERGFVYFWPIKGITLPSLWVTVAGDRPVADAHDDPGHITWGWKDGALGKRRWYYAKVLRKKATLISLETAPYFYALTENYGSPEEDHLVMYEEGRLTQAAKQIYEALLKEGALNTLDLRKAARLTSKQSDSEFNRALEVLQADFKILPVGVAEVGAWKYAFIYEIAARHYPDLPEQARLIGEAEAREKLAALYFRSVGAAQLRDVSKLFGWGPEITQRVVKRLGDGGQVTGGLSWPNQPGEWFALSTLVSEGASHLV

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
8 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
9 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
10 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
11 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
24 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
25 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
26 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
27 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
28 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
29 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
30 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
31 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
32 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
33 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
34 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
35 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
36 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
37 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
38 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
39 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
40 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
41 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
42 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
43 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
44 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
45 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_561600 2162886006 Bacteria 2346
2 Ga0065704_10212255 3300005289 Unclassified 1104
3 Ga0065707_10000453 3300005295 Bacteria 78440
4 Ga0065707_10007898 3300005295 Bacteria 2417
5 Ga0065707_10083350 3300005295 Bacteria 9466
6 Ga0070694_100019510 3300005444 Bacteria 4313
7 Ga0070694_100152354 3300005444 Bacteria 1689
8 Ga0070706_100065473 3300005467 Bacteria 3361
9 Ga0070698_100010251 3300005471 Bacteria 10009
10 Ga0070695_100380516 3300005545 Unclassified 1065
11 Ga0070696_100078054 3300005546 Unclassified 2340
12 Ga0068861_100399404 3300005719 Unclassified 1219
13 Ga0068858_100119011 3300005842 Unclassified 2469
14 Ga0068862_100135140 3300005844 Bacteria 2185
15 Ga0081539_10017321 3300005985 Bacteria 5067
16 Ga0081539_10024117 3300005985 Bacteria 3959
17 Ga0075427_10014399 3300006194 Bacteria 1213
18 Ga0075428_100073393 3300006844 Bacteria 3737
19 Ga0075433_10135913 3300006852 Bacteria 2185
20 Ga0075433_10185095 3300006852 Bacteria 1853
21 Ga0075433_10273105 3300006852 Bacteria 1498
22 Ga0075429_100003737 3300006880 Bacteria 12975
23 Ga0075429_100048673 3300006880 Bacteria 3686
24 Ga0075429_100060653 3300006880 Bacteria 3294
25 Ga0114129_10008787 3300009147 Bacteria 14409
26 Ga0114129_10123693 3300009147 Unclassified 3558
27 Ga0114129_10195510 3300009147 Unclassified 2743
28 Ga0114129_10208399 3300009147 Bacteria 2644
29 Ga0114129_10568295 3300009147 Bacteria 1473
30 Ga0105243_10041317 3300009148 Unclassified 3606
31 Ga0105243_10060620 3300009148 Unclassified 3023
32 Ga0105246_10033756 3300011119 Bacteria 3404
33 Ga0207646_10046697 3300025922 Bacteria 3885
34 Ga0207709_10057088 3300025935 Unclassified 2419
35 Ga0268265_10151782 3300028380 Bacteria 1955
36 Ga0268265_10156705 3300028380 Unclassified 1928
37 Ga0265318_10007860 3300028577 Bacteria 4791
38 Ga0265318_10059778 3300028577 Bacteria 1421
39 Ga0265338_10061955 3300028800 Bacteria 3274
40 Ga0265320_10016713 3300031240 Bacteria 4103
41 Ga0265340_10000290 3300031247 Bacteria 26366
42 Ga0265331_10013414 3300031250 Bacteria 4408
43 Ga0265316_10018182 3300031344 Bacteria 6049
44 Ga0316574_0024566 3300035398 Unclassified 3608
45 Ga0316574_0404746 3300035398 Unclassified 859
46 Ga0316584_0383534 3300036712 Bacteria 1004
47 Ga0451577_0005579 3300042876 Bacteria 12812
48 Ga0451577_0013720 3300042876 Bacteria 7572
49 Ga0451577_0084098 3300042876 Bacteria 2839
50 Ga0451577_0644964 3300042876 Unclassified 960
51 Ga0453683_0000540 3300044673 Bacteria 42176
52 Ga0453683_0034588 3300044673 Bacteria 3186
53 Ga0453683_0107008 3300044673 Bacteria 1758
54 Ga0453684_0000055 3300044712 Bacteria 532014
55 Ga0453684_0000318 3300044712 Bacteria 203553
56 Ga0453684_0000837 3300044712 Bacteria 103906
57 Ga0453684_0001406 3300044712 Bacteria 69468
58 Ga0453684_0002615 3300044712 Bacteria 43039
59 Ga0453684_0012242 3300044712 Bacteria 14206
60 Ga0453684_0016479 3300044712 Bacteria 11548
61 Ga0453684_0055021 3300044712 Bacteria 5176
62 Ga0453684_0090059 3300044712 Bacteria 3791
63 Ga0453684_0092052 3300044712 Unclassified 3740
64 Ga0453684_0092607 3300044712 Bacteria 3725
65 Ga0453684_0100237 3300044712 Bacteria 3545
66 Ga0453684_0130332 3300044712 Bacteria 3018
67 Ga0453684_0136010 3300044712 Bacteria 2942
68 Ga0453684_0140541 3300044712 Bacteria 2884
69 Ga0453684_0142594 3300044712 Unclassified 2858
70 Ga0453684_0184070 3300044712 Bacteria 2450
71 Ga0453684_0197659 3300044712 Bacteria 2346
72 Ga0453684_0211984 3300044712 Bacteria 2251
73 Ga0453684_0213340 3300044712 Bacteria 2242
74 Ga0453684_0260460 3300044712 Bacteria 1987
75 Ga0453684_0309681 3300044712 Bacteria 1792
76 Ga0453684_0365499 3300044712 Unclassified 1623
77 Ga0453684_0385537 3300044712 Bacteria 1573
78 Ga0453684_0422183 3300044712 Bacteria 1489
79 Ga0453684_0647609 3300044712 Bacteria 1153
80 Ga0453684_1032834 3300044712 Bacteria 872
81 Ga0453684_1215693 3300044712 Bacteria 790
82 Ga0451576_0000115 3300045051 Bacteria 208342
83 Ga0451576_0006025 3300045051 Bacteria 14979
84 Ga0451576_0010646 3300045051 Bacteria 10536
85 Ga0451576_0083008 3300045051 Unclassified 3333
86 Ga0451576_0123525 3300045051 Bacteria 2696
87 Ga0451576_0176133 3300045051 Bacteria 2233
88 Ga0451576_0450717 3300045051 Bacteria 1351
89 Ga0451576_0647617 3300045051 Bacteria 1110
90 Ga0501041_0133963 3300049577 Bacteria 1543
91 Ga0501072_0037633 3300049588 Bacteria 3795
92 Ga0501072_0244038 3300049588 Bacteria 1431
93 Ga0501075_0361475 3300049591 Unclassified 1106
94 Ga0501076_0016951 3300049592 Bacteria 5530
95 Ga0501079_0051693 3300049741 Bacteria 3173
96 nmdc:mga05p37_110122_c1 3300050507 Unclassified 3388
97 nmdc:mga05p37_184814_c1 3300050507 Unclassified 2534
98 nmdc:mga05p37_49904_c1 3300050507 Bacteria 5147
99 nmdc:mga05p37_58295_c1 3300050507 Bacteria 4756
100 nmdc:mga05p37_58640_c1 3300050507 Bacteria 4741
101 nmdc:mga05p37_619500_c1 3300050507 Unclassified 1218
102 nmdc:mga05p37_65053_c1 3300050507 Bacteria 4487
103 nmdc:mga09592_299874_c1 3300050508 Unclassified 1393
104 nmdc:mga09592_56452_c1 3300050508 Bacteria 3318
105 nmdc:mga06r32_300552_c1 3300050510 Unclassified 1591
106 nmdc:mga06r32_325266_c1 3300050510 Bacteria 1523
107 nmdc:mga08y16_368176_c1 3300050511 Unclassified 1474
108 nmdc:mga0a205_52212_c1 3300050515 Unclassified 3946
109 Ga0501084_0128264 3300054114 Unclassified 2135
110 Ga0501084_0207766 3300054114 Bacteria 1652
111 Ga0501084_0464693 3300054114 Unclassified 1070

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028380 Ga0268265_10156705 Ga0268265_101567052 249
2 3300044712 Ga0453684_1215693 Ga0453684_1215693_10_759 249
3 3300044712 Ga0453684_1032834 Ga0453684_1032834_94_849 251
4 3300035398 Ga0316574_0404746 Ga0316574_0404746_16_801 259
5 3300050507 nmdc:mga05p37_619500_c1 nmdc:mga05p37_619500_c1_51_830 259
6 3300049588 Ga0501072_0244038 Ga0501072_0244038_601_1398 265
7 3300044712 Ga0453684_0092607 Ga0453684_0092607_1363_2205 280
8 3300005985 Ga0081539_10017321 Ga0081539_100173211 281
9 3300042876 Ga0451577_0084098 Ga0451577_0084098_1664_2509 281
10 3300044712 Ga0453684_0016479 Ga0453684_0016479_9374_10219 281
11 3300044712 Ga0453684_0100237 Ga0453684_0100237_667_1512 281
12 3300044712 Ga0453684_0136010 Ga0453684_0136010_1264_2109 281
13 3300044712 Ga0453684_0365499 Ga0453684_0365499_149_994 281
14 3300045051 Ga0451576_0123525 Ga0451576_0123525_1822_2667 281
15 3300049577 Ga0501041_0133963 Ga0501041_0133963_659_1504 281
16 3300049588 Ga0501072_0037633 Ga0501072_0037633_2392_3237 281
17 3300049591 Ga0501075_0361475 Ga0501075_0361475_164_1009 281
18 3300049592 Ga0501076_0016951 Ga0501076_0016951_1872_2717 281
19 3300049741 Ga0501079_0051693 Ga0501079_0051693_1948_2793 281
20 3300054114 Ga0501084_0207766 Ga0501084_0207766_710_1555 281
21 3300044712 Ga0453684_0000318 Ga0453684_0000318_96254_97102 282
22 3300044712 Ga0453684_0012242 Ga0453684_0012242_4568_5416 282
23 3300044712 Ga0453684_0130332 Ga0453684_0130332_1486_2337 282
24 3300005289 Ga0065704_10212255 Ga0065704_102122551 283
25 3300005295 Ga0065707_10007898 Ga0065707_100078983 283
26 3300005295 Ga0065707_10083350 Ga0065707_100833507 283
27 3300005444 Ga0070694_100019510 Ga0070694_1000195101 283
28 3300005444 Ga0070694_100152354 Ga0070694_1001523542 283
29 3300005471 Ga0070698_100010251 Ga0070698_1000102514 283
30 3300005545 Ga0070695_100380516 Ga0070695_1003805161 283
31 3300005546 Ga0070696_100078054 Ga0070696_1000780542 283
32 3300005985 Ga0081539_10024117 Ga0081539_100241172 283
33 3300006194 Ga0075427_10014399 Ga0075427_100143992 283
34 3300006844 Ga0075428_100073393 Ga0075428_1000733932 283
35 3300006852 Ga0075433_10185095 Ga0075433_101850952 283
36 3300006880 Ga0075429_100003737 Ga0075429_10000373711 283
37 3300006880 Ga0075429_100048673 Ga0075429_1000486732 283
38 3300006880 Ga0075429_100060653 Ga0075429_1000606534 283
39 3300009147 Ga0114129_10123693 Ga0114129_101236934 283
40 3300009147 Ga0114129_10208399 Ga0114129_102083993 283
41 3300009147 Ga0114129_10568295 Ga0114129_105682952 283
42 3300009148 Ga0105243_10041317 Ga0105243_100413173 283
43 3300009148 Ga0105243_10060620 Ga0105243_100606203 283
44 3300025922 Ga0207646_10046697 Ga0207646_100466973 283
45 3300028577 Ga0265318_10007860 Ga0265318_100078604 283
46 3300028800 Ga0265338_10061955 Ga0265338_100619553 283
47 3300031240 Ga0265320_10016713 Ga0265320_100167134 283
48 3300031247 Ga0265340_10000290 Ga0265340_1000029019 283
49 3300031250 Ga0265331_10013414 Ga0265331_100134142 283
50 3300031344 Ga0265316_10018182 Ga0265316_100181822 283
51 3300035398 Ga0316574_0024566 Ga0316574_0024566_1887_2744 283
52 3300036712 Ga0316584_0383534 Ga0316584_0383534_86_943 283
53 3300042876 Ga0451577_0005579 Ga0451577_0005579_11743_12612 283
54 3300042876 Ga0451577_0013720 Ga0451577_0013720_3646_4500 283
55 3300042876 Ga0451577_0644964 Ga0451577_0644964_67_930 283
56 3300044673 Ga0453683_0000540 Ga0453683_0000540_31272_32126 283
57 3300044673 Ga0453683_0034588 Ga0453683_0034588_253_1107 283
58 3300044673 Ga0453683_0107008 Ga0453683_0107008_418_1269 283
59 3300044712 Ga0453684_0000055 Ga0453684_0000055_335470_336339 283
60 3300044712 Ga0453684_0000837 Ga0453684_0000837_23806_24657 283
61 3300044712 Ga0453684_0001406 Ga0453684_0001406_33696_34550 283
62 3300044712 Ga0453684_0055021 Ga0453684_0055021_1106_1960 283
63 3300044712 Ga0453684_0092052 Ga0453684_0092052_25_879 283
64 3300044712 Ga0453684_0140541 Ga0453684_0140541_1262_2116 283
65 3300044712 Ga0453684_0142594 Ga0453684_0142594_1857_2711 283
66 3300044712 Ga0453684_0184070 Ga0453684_0184070_1164_2018 283
67 3300044712 Ga0453684_0197659 Ga0453684_0197659_1462_2316 283
68 3300044712 Ga0453684_0211984 Ga0453684_0211984_178_1029 283
69 3300044712 Ga0453684_0213340 Ga0453684_0213340_525_1379 283
70 3300044712 Ga0453684_0260460 Ga0453684_0260460_162_1013 283
71 3300044712 Ga0453684_0309681 Ga0453684_0309681_402_1253 283
72 3300044712 Ga0453684_0385537 Ga0453684_0385537_367_1221 283
73 3300044712 Ga0453684_0422183 Ga0453684_0422183_253_1116 283
74 3300044712 Ga0453684_0647609 Ga0453684_0647609_55_909 283
75 3300045051 Ga0451576_0000115 Ga0451576_0000115_81764_82645 283
76 3300045051 Ga0451576_0006025 Ga0451576_0006025_6221_7084 283
77 3300045051 Ga0451576_0010646 Ga0451576_0010646_6006_6860 283
78 3300045051 Ga0451576_0083008 Ga0451576_0083008_1866_2717 283
79 3300045051 Ga0451576_0176133 Ga0451576_0176133_73_927 283
80 3300045051 Ga0451576_0450717 Ga0451576_0450717_315_1187 283
81 3300045051 Ga0451576_0647617 Ga0451576_0647617_189_1040 283
82 3300050507 nmdc:mga05p37_110122_c1 nmdc:mga05p37_110122_c1_681_1532 283
83 3300050507 nmdc:mga05p37_184814_c1 nmdc:mga05p37_184814_c1_572_1423 283
84 3300050507 nmdc:mga05p37_58640_c1 nmdc:mga05p37_58640_c1_3582_4439 283
85 3300050507 nmdc:mga05p37_65053_c1 nmdc:mga05p37_65053_c1_3578_4429 283
86 3300050508 nmdc:mga09592_299874_c1 nmdc:mga09592_299874_c1_71_922 283
87 3300050508 nmdc:mga09592_56452_c1 nmdc:mga09592_56452_c1_613_1536 283
88 3300050510 nmdc:mga06r32_300552_c1 nmdc:mga06r32_300552_c1_395_1249 283
89 3300050511 nmdc:mga08y16_368176_c1 nmdc:mga08y16_368176_c1_524_1393 283
90 3300054114 Ga0501084_0128264 Ga0501084_0128264_208_1059 283
91 3300054114 Ga0501084_0464693 Ga0501084_0464693_14_868 283
92 3300044712 Ga0453684_0002615 Ga0453684_0002615_4325_5179 284
93 3300044712 Ga0453684_0090059 Ga0453684_0090059_558_1412 284
94 3300005467 Ga0070706_100065473 Ga0070706_1000654734 289
95 3300028577 Ga0265318_10059778 Ga0265318_100597782 289
96 3300005844 Ga0068862_100135140 Ga0068862_1001351402 291
97 3300028380 Ga0268265_10151782 Ga0268265_101517822 291
98 3300050507 nmdc:mga05p37_58295_c1 nmdc:mga05p37_58295_c1_2364_3245 291
99 3300050510 nmdc:mga06r32_325266_c1 nmdc:mga06r32_325266_c1_482_1363 291
100 3300005295 Ga0065707_10000453 Ga0065707_1000045319 292
101 3300005719 Ga0068861_100399404 Ga0068861_1003994041 292
102 3300005842 Ga0068858_100119011 Ga0068858_1001190112 292
103 3300006852 Ga0075433_10273105 Ga0075433_102731052 292
104 3300025935 Ga0207709_10057088 Ga0207709_100570882 292
105 3300006852 Ga0075433_10135913 Ga0075433_101359132 295
106 3300009147 Ga0114129_10008787 Ga0114129_1000878714 295
107 3300009147 Ga0114129_10195510 Ga0114129_101955102 295
108 3300050507 nmdc:mga05p37_49904_c1 nmdc:mga05p37_49904_c1_725_1612 295
109 3300050515 nmdc:mga0a205_52212_c1 nmdc:mga0a205_52212_c1_440_1327 295
110 2162886006 SwRhRL3b_contig_561600 SwRhRL3b_0266.00000810 297
111 3300011119 Ga0105246_10033756 Ga0105246_100337562 297

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF24741

25

246

0.9

PF06224

AlkZ-like

DNA glycosylase AlkZ-like

89

268

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jba-assembly1.cif.gz_B crystal structure of the oxidized form of marr from e.coli 0.914 234 293
4jba-assembly1.cif.gz_A crystal structure of the oxidized form of marr from e.coli 0.9131 234 293
2pfb-assembly1.cif.gz_B structure of oxidized ohrr from xanthamonas campestris 0.9061 235 295
5f7p-assembly1.cif.gz_A rok repressor lmo0178 from listeria monocytogenes 0.9061 236 293
3vod-assembly1.cif.gz_A crystal structure of mutant marr c80s from e.coli 0.9021 234 293
ID Description Score Start End Superfamily
af_P32910_88_152_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9369 236 293 1.10.10.10
af_Q69XJ1_51_114_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9189 235 292 1.10.10.10
2vxzA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9157 231 293 1.10.10.10
af_O94553_84_149_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9052 236 293 1.10.10.10
3bp8A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.901 232 280 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3Q9HRW4-F1-model_v4 Uncharacterized protein 0.9278 229 295
AF-A0A6V8L5N7-F1-model_v4 HTH luxR-type domain-containing protein 0.9241 236 293 GO:0003677
GO:0006355
AF-A0A2V6R9I2-F1-model_v4 Uncharacterized protein 0.914 213 293
AF-A0A7K4HIC3-F1-model_v4 ArsR family transcriptional regulator 0.8997 234 294
AF-A0A380SW80-F1-model_v4 Winged helix-turn-helix domain-containing protein 0.8885 229 297

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pLDDT pTM Quality
76.33 0.77 High
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Predicted Structure (AlphaFold2)

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