F039090

General Info

Members Datasets Scaffolds Average Seq Length
106 85 67 400

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0286678|Ga0395898_0286678_18_1265
Length 389
Sequence MLAGRFRYGVTLGAMGILPGAWRRTAAGAGLLSSSGEVAPTIFAEISGLAARTGAINLGQGFPDEDGPAEVLEAARAAILGGANQYPPGRGVPDLLRAIAEHQRRFYGLELDPEREIVVTAGATEAIAAALLALVDGPEDEVVVFEPFYDSYAAIAALSGARLRTVPLRLPDFQPDPEELASAVTDRCRVILVNDPHNPTGAVEHLAFTAPHLPIATLPGAAERTLTISSAGKTFSVTGWKIGWIHGPAELITAVLSVKQFLTYVNGGPFQPAVAAGLRLPDAFFLDAAERLHAKHDLLARGLAAAGFEVHPPAGGYFTVADASAIGGADADAFCRELPVRAGVAAIPLTAFVLPEHRDAYRGLVRFAACKRPEVIAEASERLAGFRRG

Samples

Sample ID Description Type Environment
1 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
2 2643221546 Microbacterium sp. Root53 Isolate Unclassified
3 2643221553 Microbacterium sp. Root553 Isolate Unclassified
4 2643221566 Microbacterium sp. Root166 Isolate Unclassified
5 2643221630 Microbacterium sp. Root322 Isolate Unclassified
6 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
7 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
8 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
9 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
10 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
11 2773857759 Microbacterium sp. 1294 Isolate Unclassified
12 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
13 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
14 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
15 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
16 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
17 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
18 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
19 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
20 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
21 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
22 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
23 2919069694 Microbacterium sp. 1154 Isolate Unclassified
24 2919395869 Microbacterium resistens 2980 Isolate Unclassified
25 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
26 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
27 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
28 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
29 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
30 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
31 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
32 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
33 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
34 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
35 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
36 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
42 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
46 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
48 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
49 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
50 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
53 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
54 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
57 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
58 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
59 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
60 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
61 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
62 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
63 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
64 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
65 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
66 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
67 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
68 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
69 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
70 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
71 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
72 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
78 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
79 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
80 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
81 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
82 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
83 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
84 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
85 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 63.21
Metatranscriptomes 0
Isolates 36.79

Biome Distribution

Category Percentage (%)
Aerial Root 0.94
Bulb 0
Endosphere 10.38
Nodule 0
Rhizoplane 6.6
Rhizosphere 30.19
Stem 0
Stem Tuber 0
Unclassified 51.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1002250 3300002738 Bacteria 5288
2 Ga0070665_100372657 3300005548 Bacteria 1435
3 Ga0075365_10002603 3300006038 Bacteria 8927
4 Ga0075364_10040712 3300006051 Bacteria 3014
5 Ga0075364_10084233 3300006051 Bacteria 2105
6 Ga0075367_10002154 3300006178 Bacteria 8861
7 Ga0075369_10010147 3300006186 Bacteria 3680
8 Ga0171462_1003 3300013250 Bacteria 853796
9 Ga0157372_10446548 3300013307 Bacteria 1507
10 Ga0157380_10184248 3300014326 Bacteria 1837
11 Ga0209646_1000092 3300025246 Bacteria 185930
12 Ga0268266_10041396 3300028379 Bacteria 3931
13 Ga0307515_10144968 3300028794 Bacteria 2522
14 Ga0307513_10018794 3300031456 Bacteria 8249
15 Ga0307514_10016976 3300031649 Bacteria 5993
16 Ga0307406_10007155 3300031901 Bacteria 6181
17 Ga0307406_10024069 3300031901 Bacteria 3632
18 Ga0307414_10030439 3300032004 Bacteria 3526
19 Ga0395898_0286678 3300037466 Bacteria 1571
20 Ga0395901_0067871 3300038443 Bacteria 3715
21 Ga0451843_0081589 3300041509 Bacteria 1991
22 Ga0466970_0004193 3300044765 Bacteria 7092
23 Ga0466960_0026798 3300044901 Bacteria 2622
24 Ga0495627_008396 3300046453 Bacteria 3877
25 Ga0495654_0040342 3300046530 Bacteria 2327
26 Ga0496101_0059044 3300048904 Bacteria 2780
27 Ga0496104_0170444 3300048907 Bacteria 2087
28 Ga0496104_0334040 3300048907 Bacteria 1428
29 Ga0496105_0043378 3300048908 Bacteria 3710
30 Ga0496113_0026312 3300048916 Bacteria 4158
31 Ga0496114_0051214 3300048917 Bacteria 3437
32 Ga0496114_0216599 3300048917 Bacteria 1680
33 Ga0496117_0000053 3300048920 Bacteria 279396
34 Ga0496117_0000733 3300048920 Bacteria 51523
35 Ga0496117_0002228 3300048920 Bacteria 25067
36 Ga0496117_0043938 3300048920 Bacteria 3241
37 Ga0496118_0023935 3300048921 Bacteria 5287
38 Ga0496118_0029124 3300048921 Bacteria 4637
39 Ga0496119_0003765 3300048922 Bacteria 15522
40 Ga0496119_0006727 3300048922 Bacteria 10562
41 Ga0496119_0034279 3300048922 Bacteria 3348
42 Ga0496120_0001325 3300048923 Bacteria 30524
43 Ga0496122_0000373 3300048925 Bacteria 96291
44 Ga0496122_0019171 3300048925 Bacteria 6265
45 Ga0496122_0032716 3300048925 Bacteria 4294
46 Ga0496123_0000213 3300048926 Bacteria 118378
47 Ga0496123_0002388 3300048926 Bacteria 23500
48 Ga0496123_0113376 3300048926 Bacteria 1544
49 Ga0496124_0001974 3300048927 Bacteria 28000
50 Ga0496124_0020090 3300048927 Bacteria 6185
51 Ga0496125_0003751 3300048928 Bacteria 18093
52 Ga0496125_0004641 3300048928 Bacteria 15689
53 Ga0496125_0045079 3300048928 Bacteria 3717
54 Ga0496126_0003066 3300048929 Bacteria 21639
55 Ga0496126_0010742 3300048929 Bacteria 9561
56 Ga0496126_0147804 3300048929 Bacteria 2016
57 Ga0501034_0001286 3300049571 Bacteria 33921
58 Ga0501038_0018291 3300049574 Bacteria 6326
59 Ga0501038_0060547 3300049574 Bacteria 3240
60 Ga0501039_0146246 3300049575 Bacteria 1857
61 Ga0501070_0003126 3300049586 Bacteria 14415
62 nmdc:mga03n38_37947_c1 3300050490 Bacteria 2081
63 nmdc:mga00v17_73817_c1 3300050491 Bacteria 2119
64 nmdc:mga06z11_3545_c1 3300050494 Bacteria 6048
65 Ga0500588_0001218 3300053146 Bacteria 4767
66 Ga0500616_0000241 3300053153 Bacteria 86038
67 Ga0500616_0002598 3300053153 Bacteria 14810

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028794 Ga0307515_10144968 Ga0307515_101449683 366
2 3300013307 Ga0157372_10446548 Ga0157372_104465481 368
3 3300048904 Ga0496101_0059044 Ga0496101_0059044_1388_2509 368
4 3300048907 Ga0496104_0170444 Ga0496104_0170444_790_1896 368
5 3300048907 Ga0496104_0334040 Ga0496104_0334040_95_1216 368
6 3300048908 Ga0496105_0043378 Ga0496105_0043378_639_1745 368
7 3300048916 Ga0496113_0026312 Ga0496113_0026312_2057_3163 368
8 3300048917 Ga0496114_0051214 Ga0496114_0051214_2064_3185 368
9 3300046530 Ga0495654_0040342 Ga0495654_0040342_1169_2281 369
10 3300050490 nmdc:mga03n38_37947_c1 nmdc:mga03n38_37947_c1_141_1250 369
11 3300050494 nmdc:mga06z11_3545_c1 nmdc:mga06z11_3545_c1_1909_3018 369
12 3300049574 Ga0501038_0018291 Ga0501038_0018291_1961_3091 376
13 3300048920 Ga0496117_0043938 Ga0496117_0043938_1699_2901 379
14 3300048925 Ga0496122_0032716 Ga0496122_0032716_1479_2681 379
15 3300048926 Ga0496123_0113376 Ga0496123_0113376_118_1320 379
16 3300049575 Ga0501039_0146246 Ga0501039_0146246_422_1621 381
17 3300053146 Ga0500588_0001218 Ga0500588_0001218_1863_3029 384
18 3300037466 Ga0395898_0286678 Ga0395898_0286678_18_1265 388
19 3300048920 Ga0496117_0000053 Ga0496117_0000053_1730_2935 394
20 3300048922 Ga0496119_0003765 Ga0496119_0003765_2991_4196 394
21 3300048923 Ga0496120_0001325 Ga0496120_0001325_1979_3184 394
22 3300048926 Ga0496123_0002388 Ga0496123_0002388_5212_6417 394
23 3300048927 Ga0496124_0020090 Ga0496124_0020090_4953_6158 394
24 3300048928 Ga0496125_0003751 Ga0496125_0003751_15953_17158 394
25 3300048929 Ga0496126_0010742 Ga0496126_0010742_5423_6628 394
26 3300031456 Ga0307513_10018794 Ga0307513_100187942 395
27 3300044765 Ga0466970_0004193 Ga0466970_0004193_2708_3958 395
28 3300053153 Ga0500616_0000241 Ga0500616_0000241_4548_5744 395
29 3300053153 Ga0500616_0002598 Ga0500616_0002598_6229_7434 395
30 iso_pu_bacteria 2833709550 2833711316 395
31 iso_pu_bacteria 2870628048 2870630677 395
32 iso_pu_bacteria 2643221546 2643752804 396
33 iso_pu_bacteria 2757320536 2758226444 396
34 iso_pu_bacteria 2773857758 2774380080 396
35 iso_pu_bacteria 2808606368 2808885934 396
36 iso_pu_bacteria 2821268502 2821270349 396
37 iso_pu_bacteria 2852646457 2852646795 396
38 iso_pu_bacteria 2852663356 2852664634 396
39 iso_pu_bacteria 2857723135 2857723255 396
40 iso_pu_bacteria 2904509784 2904511696 396
41 iso_pu_bacteria 2906799679 2906803136 396
42 iso_pu_bacteria 2908678064 2908680621 396
43 iso_pu_bacteria 2919069694 2919071825 396
44 iso_pu_bacteria 2919395869 2919395935 396
45 iso_pu_bacteria 2974294766 2974297484 396
46 iso_pu_bacteria 2974324384 2974326278 396
47 iso_pu_bacteria 2977228692 2977231712 396
48 iso_pu_bacteria 2977236895 2977237072 396
49 iso_pu_bacteria 2977264416 2977267025 396
50 iso_pu_bacteria 2984542743 2984545136 396
51 iso_pu_bacteria 8004212874 8004213796 396
52 iso_pu_bacteria 8016254467 8016257241 396
53 iso_pu_bacteria 8045830549 8045831939 396
54 3300031649 Ga0307514_10016976 Ga0307514_100169764 397
55 3300038443 Ga0395901_0067871 Ga0395901_0067871_1698_2900 398
56 3300044901 Ga0466960_0026798 Ga0466960_0026798_316_1542 398
57 3300013250 Ga0171462_1003 Ga0171462_100342 399
58 3300048922 Ga0496119_0006727 Ga0496119_0006727_7655_8854 399
59 3300049586 Ga0501070_0003126 Ga0501070_0003126_11740_12939 399
60 iso_pu_bacteria 2643221566 2643848740 399
61 3300048920 Ga0496117_0000733 Ga0496117_0000733_22904_24106 400
62 3300048921 Ga0496118_0023935 Ga0496118_0023935_1830_3032 400
63 3300048922 Ga0496119_0034279 Ga0496119_0034279_801_2003 400
64 3300048925 Ga0496122_0000373 Ga0496122_0000373_90682_91884 400
65 3300048926 Ga0496123_0000213 Ga0496123_0000213_26211_27413 400
66 3300048927 Ga0496124_0001974 Ga0496124_0001974_21280_22482 400
67 3300048928 Ga0496125_0045079 Ga0496125_0045079_2493_3695 400
68 3300048929 Ga0496126_0147804 Ga0496126_0147804_622_1824 400
69 3300041509 Ga0451843_0081589 Ga0451843_0081589_644_1915 406
70 iso_pu_bacteria 2946041624 2946043573 407
71 iso_pu_bacteria 8004182704 8004185910 408
72 iso_pu_bacteria 2643221724 2644679553 409
73 iso_pu_bacteria 2728369380 2730229062 409
74 iso_pu_bacteria 2747842429 2747951930 409
75 iso_pu_bacteria 2946033335 2946034341 409
76 3300014326 Ga0157380_10184248 Ga0157380_101842482 410
77 iso_pu_bacteria 2643221542 2643732017 410
78 iso_pu_bacteria 2643221553 2643785222 410
79 iso_pu_bacteria 2643221630 2644170832 410
80 iso_pu_bacteria 2773857759 2774384171 410
81 iso_pu_bacteria 2808606306 2808630858 410
82 iso_pu_bacteria 2945968032 2945971237 410
83 iso_pu_bacteria 2946080515 2946081505 410
84 iso_pu_bacteria 2977251589 2977254315 410
85 3300048917 Ga0496114_0216599 Ga0496114_0216599_349_1602 411
86 3300049571 Ga0501034_0001286 Ga0501034_0001286_13191_14426 411
87 3300031901 Ga0307406_10007155 Ga0307406_100071555 413
88 3300032004 Ga0307414_10030439 Ga0307414_100304393 413
89 3300049574 Ga0501038_0060547 Ga0501038_0060547_36_1352 413
90 3300002738 JGI25154J39366_1002250 JGI25154J39366_10022506 414
91 3300005548 Ga0070665_100372657 Ga0070665_1003726572 414
92 3300006038 Ga0075365_10002603 Ga0075365_100026032 414
93 3300006051 Ga0075364_10040712 Ga0075364_100407124 414
94 3300006051 Ga0075364_10084233 Ga0075364_100842332 414
95 3300006178 Ga0075367_10002154 Ga0075367_1000215410 414
96 3300006186 Ga0075369_10010147 Ga0075369_100101474 414
97 3300025246 Ga0209646_1000092 Ga0209646_100009215 414
98 3300028379 Ga0268266_10041396 Ga0268266_100413962 414
99 3300031901 Ga0307406_10024069 Ga0307406_100240692 414
100 3300046453 Ga0495627_008396 Ga0495627_008396_1004_2248 414
101 3300048920 Ga0496117_0002228 Ga0496117_0002228_4831_6075 414
102 3300048921 Ga0496118_0029124 Ga0496118_0029124_997_2241 414
103 3300048925 Ga0496122_0019171 Ga0496122_0019171_2872_4116 414
104 3300048928 Ga0496125_0004641 Ga0496125_0004641_669_1913 414
105 3300048929 Ga0496126_0003066 Ga0496126_0003066_19430_20674 414
106 3300050491 nmdc:mga00v17_73817_c1 nmdc:mga00v17_73817_c1_406_1650 414

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

53

210

0.96

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

110

198

0.94

PF00155

Aminotran_1_2

Aminotransferase class I and II

204

383

0.87

PF00266

Aminotran_5

Aminotransferase class-V

93

210

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o0r-assembly1.cif.gz_B the three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis 0.9641 39 412
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9593 40 410
1u08-assembly1.cif.gz_B crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9567 40 410
5veq-assembly1.cif.gz_B mouse kynurenine aminotransferase iii, re-refinement of the pdb structure 3e2y 0.9546 55 409
3e2y-assembly1.cif.gz_A crystal structure of mouse kynurenine aminotransferase iii in complex with glutamine 0.9502 40 409
ID Description Score Start End Superfamily
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9779 69 301 3.40.640.10
af_P9WPZ5_1_390_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9697 39 410 3.40.50.720
af_Q7XDA3_47_275_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9669 74 303 3.40.640.10
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9616 69 301 3.40.640.10
2o0rA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9608 68 307 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A162GM99-F1-model_v4 Putative N-succinyldiaminopimelate aminotransferase DapC (EC 2.6.1.17) 0.9867 18 339 GO:0005737
GO:0009016
GO:0009058
GO:0016212
GO:0030170
AF-A0A0A6YBG7-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9833 26 410 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A7C2F4E5-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.9789 40 413 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-W1PKG7-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9776 40 410 GO:0005737
GO:0009058
GO:0009507
GO:0016212
GO:0030170
AF-A0A538AAI3-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9771 40 414 GO:0003677
GO:0005737
GO:0008409
GO:0009058
GO:0016212
GO:0030170
GO:0140640

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pLDDT pTM Quality
90.55 0.91 High
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Predicted Structure (AlphaFold2)

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