F034797

General Info

Members Datasets Scaffolds Average Seq Length
105 86 210 177

Family's Representative Sequence

Representative Sequence 3300053096|Ga0500641_0000088|Ga0500641_0000088_19037_19627
Length 196
Sequence VSNCNWFNFKVITIKTTAMDSINKQQKEDNFKNLIGEEALEKIRSLAGKSGGCFFCTRIETGKRFETRPMAPEKIDDDGNMWFLSAKDSHKNKELEADPAAQLLFQGSSYSDFLTLYGKATISTDKQKIDELWDAQMKNWFTEGKDDPRITVIKFTPTDGYYWDVKTNMAVSMVKRAYGAIVGETYDDSVQGKIKP

Samples

Sample ID Description Type Environment
1 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
17 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
18 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
19 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
22 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
23 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
28 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
29 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
44 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
45 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
48 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
49 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
50 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
51 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
52 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
53 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
54 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
55 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
56 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
57 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
58 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
59 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
60 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
61 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
62 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
63 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
64 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
65 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
66 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
77 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
78 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
80 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
81 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
82 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
83 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
84 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
85 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
86 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.19
Metatranscriptomes 0
Isolates 3.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.86
Nodule 0
Rhizoplane 1.9
Rhizosphere 87.62
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500641_0000088 3300053096 Bacteria 36507
2 rootL2_10079938 3300003322 Bacteria 4451
3 rootL2_10209053 3300003322 Bacteria 1685
4 rootH1_10095819 3300003323 Bacteria 1399
5 rootH1_10280596 3300003323 Unclassified 2246
6 Ga0065714_10029490 3300005288 Bacteria 1106
7 Ga0070658_10451002 3300005327 Bacteria 1108
8 Ga0070658_10503628 3300005327 Bacteria 1046
9 Ga0070683_100296106 3300005329 Bacteria 1539
10 Ga0070680_100143763 3300005336 Unclassified 2001
11 Ga0068868_100323532 3300005338 Bacteria 1314
12 Ga0070660_100096840 3300005339 Bacteria 2334
13 Ga0070661_100516763 3300005344 Bacteria 957
14 Ga0070659_100000640 3300005366 Bacteria 25630
15 Ga0070662_100431830 3300005457 Bacteria 1091
16 Ga0070679_100600961 3300005530 Unclassified 1043
17 Ga0070702_100372100 3300005615 Bacteria 1013
18 Ga0097621_100516779 3300006237 Bacteria 1083
19 Ga0105237_10095987 3300009545 Bacteria 2955
20 Ga0105239_11476682 3300010375 Bacteria 785
21 Ga0105246_10516930 3300011119 Bacteria 1017
22 Ga0157370_10007800 3300013104 Bacteria 11599
23 Ga0157370_10285084 3300013104 Bacteria 1526
24 Ga0157369_10404341 3300013105 Bacteria 1416
25 Ga0157369_10724286 3300013105 Bacteria 1024
26 Ga0157374_10040307 3300013296 Bacteria 4300
27 Ga0157374_10143489 3300013296 Unclassified 2318
28 Ga0157378_10023375 3300013297 Bacteria 5440
29 Ga0157378_10257407 3300013297 Bacteria 1673
30 Ga0163162_10016573 3300013306 Bacteria 7203
31 Ga0163162_10293064 3300013306 Bacteria 1759
32 Ga0157372_10003671 3300013307 Bacteria 16502
33 Ga0157372_10929815 3300013307 Bacteria 1008
34 Ga0157372_11073696 3300013307 Unclassified 932
35 Ga0157375_10124900 3300013308 Bacteria 2687
36 Ga0163163_10204461 3300014325 Unclassified 2023
37 Ga0163163_10612862 3300014325 Bacteria 1152
38 Ga0163161_10008369 3300017792 Bacteria 7161
39 Ga0163161_10391626 3300017792 Bacteria 1112
40 Ga0163161_10520786 3300017792 Bacteria 971
41 Ga0213876_10191020 3300021384 Bacteria 1089
42 Ga0207656_10275564 3300025321 Bacteria 829
43 Ga0207705_10315270 3300025909 Bacteria 1201
44 Ga0207705_10368536 3300025909 Bacteria 1108
45 Ga0207705_10446008 3300025909 Bacteria 1003
46 Ga0207660_10161840 3300025917 Unclassified 1727
47 Ga0207657_10098344 3300025919 Bacteria 2432
48 Ga0207652_10793352 3300025921 Unclassified 841
49 Ga0207650_11093919 3300025925 Bacteria 678
50 Ga0207659_10332920 3300025926 Bacteria 1256
51 Ga0207690_10001736 3300025932 Bacteria 13382
52 Ga0207691_10098021 3300025940 Unclassified 2619
53 Ga0207651_10426909 3300025960 Bacteria 1133
54 Ga0207651_11014506 3300025960 Bacteria 742
55 Ga0207712_10030521 3300025961 Bacteria 3624
56 Ga0207676_10747198 3300026095 Bacteria 951
57 Ga0207698_10367785 3300026142 Bacteria 1364
58 Ga0207698_10618178 3300026142 Bacteria 1070
59 Ga0209998_10018617 3300027717 Bacteria 1475
60 Ga0209974_10033237 3300027876 Bacteria 1711
61 Ga0316182_1051674 3300030745 Bacteria 8568
62 Ga0265327_10000653 3300031251 Bacteria 55957
63 Ga0265327_10139911 3300031251 Unclassified 1132
64 Ga0307408_101451845 3300031548 Unclassified 647
65 Ga0307410_11384306 3300031852 Bacteria 617
66 Ga0307414_10027524 3300032004 Bacteria 3675
67 Ga0436365_0268744 3300039437 Unclassified 1316
68 Ga0439439_0117491 3300041406 Bacteria 740
69 Ga0451807_1892064 3300041486 Bacteria 565
70 Ga0450910_037559 3300042147 Bacteria 776
71 Ga0439434_0046668 3300042435 Bacteria 1337
72 Ga0451577_0136811 3300042876 Unclassified 2200
73 Ga0453684_0381515 3300044712 Bacteria 1582
74 Ga0495627_001383 3300046453 Bacteria 14376
75 Ga0495638_0434030 3300046460 Unclassified 674
76 Ga0495650_0023080 3300046471 Bacteria 2969
77 Ga0495607_0197724 3300046501 Bacteria 997
78 Ga0495606_0010093 3300046507 Bacteria 7887
79 Ga0495606_0030316 3300046507 Bacteria 3781
80 Ga0495643_0001306 3300046522 Bacteria 23668
81 Ga0495672_0034239 3300047320 Bacteria 3141
82 Ga0496115_0009276 3300048918 Bacteria 7312
83 Ga0496125_0000031 3300048928 Bacteria 365156
84 Ga0496126_0015434 3300048929 Bacteria 7683
85 Ga0501031_0253490 3300049568 Bacteria 1144
86 Ga0501032_0011679 3300049569 Bacteria 6297
87 Ga0501034_0005855 3300049571 Bacteria 13374
88 Ga0501036_0089180 3300049572 Bacteria 2606
89 Ga0501037_0022505 3300049573 Bacteria 4662
90 Ga0501038_0111233 3300049574 Bacteria 2269
91 Ga0501039_0108182 3300049575 Bacteria 2173
92 Ga0501043_0289573 3300049579 Bacteria 1254
93 Ga0501046_0382646 3300049580 Bacteria 1018
94 Ga0501047_0017403 3300049581 Bacteria 6883
95 Ga0501080_0473957 3300049742 Bacteria 1120
96 Ga0501241_020827 3300049758 Bacteria 1208
97 Ga0501035_0015072 3300049822 Bacteria 7132
98 Ga0501044_0063975 3300049823 Bacteria 3756
99 Ga0501284_00068 3300050005 Bacteria 31369
100 Ga0500556_0036014 3300053104 Unclassified 1714
101 Ga0500622_0037071 3300053156 Bacteria 2548
102 2852626909 2852623160 Bacteria 4376875
103 2884938039 2884933994 Bacteria 4535041
104 2958514990 2958512119 Bacteria 4528530
105 2965321045 2965320100 Bacteria 3975600
106 Ga0500641_0000088
107 rootL2_10079938
108 rootL2_10209053
109 rootH1_10095819
110 rootH1_10280596
111 Ga0065714_10029490
112 Ga0070658_10451002
113 Ga0070658_10503628
114 Ga0070683_100296106
115 Ga0070680_100143763
116 Ga0068868_100323532
117 Ga0070660_100096840
118 Ga0070661_100516763
119 Ga0070659_100000640
120 Ga0070662_100431830
121 Ga0070679_100600961
122 Ga0070702_100372100
123 Ga0097621_100516779
124 Ga0105237_10095987
125 Ga0105239_11476682
126 Ga0105246_10516930
127 Ga0157370_10007800
128 Ga0157370_10285084
129 Ga0157369_10404341
130 Ga0157369_10724286
131 Ga0157374_10040307
132 Ga0157374_10143489
133 Ga0157378_10023375
134 Ga0157378_10257407
135 Ga0163162_10016573
136 Ga0163162_10293064
137 Ga0157372_10003671
138 Ga0157372_10929815
139 Ga0157372_11073696
140 Ga0157375_10124900
141 Ga0163163_10204461
142 Ga0163163_10612862
143 Ga0163161_10008369
144 Ga0163161_10391626
145 Ga0163161_10520786
146 Ga0213876_10191020
147 Ga0207656_10275564
148 Ga0207705_10315270
149 Ga0207705_10368536
150 Ga0207705_10446008
151 Ga0207660_10161840
152 Ga0207657_10098344
153 Ga0207652_10793352
154 Ga0207650_11093919
155 Ga0207659_10332920
156 Ga0207690_10001736
157 Ga0207691_10098021
158 Ga0207651_10426909
159 Ga0207651_11014506
160 Ga0207712_10030521
161 Ga0207676_10747198
162 Ga0207698_10367785
163 Ga0207698_10618178
164 Ga0209998_10018617
165 Ga0209974_10033237
166 Ga0316182_1051674
167 Ga0265327_10000653
168 Ga0265327_10139911
169 Ga0307408_101451845
170 Ga0307410_11384306
171 Ga0307414_10027524
172 Ga0436365_0268744
173 Ga0439439_0117491
174 Ga0451807_1892064
175 Ga0450910_037559
176 Ga0439434_0046668
177 Ga0451577_0136811
178 Ga0453684_0381515
179 Ga0495627_001383
180 Ga0495638_0434030
181 Ga0495650_0023080
182 Ga0495607_0197724
183 Ga0495606_0010093
184 Ga0495606_0030316
185 Ga0495643_0001306
186 Ga0495672_0034239
187 Ga0496115_0009276
188 Ga0496125_0000031
189 Ga0496126_0015434
190 Ga0501031_0253490
191 Ga0501032_0011679
192 Ga0501034_0005855
193 Ga0501036_0089180
194 Ga0501037_0022505
195 Ga0501038_0111233
196 Ga0501039_0108182
197 Ga0501043_0289573
198 Ga0501046_0382646
199 Ga0501047_0017403
200 Ga0501080_0473957
201 Ga0501241_020827
202 Ga0501035_0015072
203 Ga0501044_0063975
204 Ga0501284_00068
205 Ga0500556_0036014
206 Ga0500622_0037071
207 2852626909
208 2884938039
209 2958514990
210 2965321045

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16242

Pyrid_ox_like

Pyridoxamine 5'-phosphate oxidase like

38

187

0.96

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

40

127

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2i02-assembly1.cif.gz_B crystal structure of a pyridoxamine 5'-phosphate oxidase-like family protein (npun_r6570) from nostoc punctiforme pcc 73102 at 1.80 a resolution 0.9056 14 141
2re7-assembly1.cif.gz_A-2 crystal structure of a pyridoxamine 5'-phosphate oxidase related protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a resolution 0.8989 18 141
2fhq-assembly1.cif.gz_B crystal structure of general stress protein from bacteroides thetaiotaomicron 0.8574 16 138
3ec6-assembly1.cif.gz_A-2 crystal structure of the general stress protein 26 from bacillus anthracis str. sterne 0.8549 14 138
2i02-assembly1.cif.gz_A crystal structure of a pyridoxamine 5'-phosphate oxidase-like family protein (npun_r6570) from nostoc punctiforme pcc 73102 at 1.80 a resolution 0.8498 16 172
ID Description Score Start End Superfamily
2re7A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8945 18 141 2.30.110.10
2i02B00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.892 14 141 2.30.110.10
2fhqB00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8567 17 138 2.30.110.10
2re7A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8429 18 141 2.30.110.10
3ec6A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.831 14 138 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A5S5CC60-F1-model_v4 General stress protein 26 0.9531 13 142
AF-A0A520C2F1-F1-model_v4 General stress protein 0.9503 8 172
AF-A0A840EGW4-F1-model_v4 General stress protein 26 0.9452 7 172
AF-A0A3S3PVM8-F1-model_v4 General stress protein 0.9416 1 172
AF-A0A641V0F6-F1-model_v4 deleted 0.9403 44 138

Map