Scaffold Information

Sample ID 3300005937
Scaffold Ga0081455_10000765
Sample Name Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1
Length 41740
Fam Num 8
Taxonomy Bacteria
Environment Rhizosphere
Lineage Bacteria;Actinomycetota;Actinomycetes;Pseudonocardiales;Pseudonocardiaceae;Amycolatopsis;Amycolatopsis

CRISPR Details

Start Coordinate: 30858 End Coordinate: 32390
Position Repeat Spacer
30858 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CACCACCGACCAACCCGCGCGGCCCGGACAACG
30919 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CGACGGGTCCTGCAGGAATCCGTCGAGGATGGC
30980 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CTAGGCCGTTCGGGGTAAGACGCGTGGCGGACG
31041 GTCGTCCCCGCGCGAGCGGGGGTGGTCC GTGGTCGCCGATCGCCGCGCTGACCCTCGGCGT
31102 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CGCCATAAGTCTTAACTGTCTCCATCTTGCCCT
31163 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CCAGTGTGACTCGGTAATCGTGGCACCGGACCA
31224 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CTCGCGGACGACGTCAAAGGGGCTAGCCAGTCG
31285 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CAGGCCCGCCGCGAGTTCGACGCCGCCGTCGAG
31346 GTCGTCCCCGCGCGAGCGGGGTGGTCCC GCCACCACGCCGCCGTTGAGTGCCCATGTGGA
31406 GTCGTCCCCGCGCGAGCGGGGGTGGTCC GTACACGCCATTGGAGTCCCAGTCGACGGGGAA
31467 GTCGTCCCCGCGCGAGCGGGGGTGGTCC GACCTCGACACCGGCGACATCCAAACCAAGGA
31527 CGTCGTCCCGCGCGAGCGGGGGTGGTCC CCAGGTGTGGTGCCAAAACTCGCGCTGCACCTC
31588 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CCCATGACCACCAAGGAGACCACCATGACCGGC
31649 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CGGTGGTGGGGTGGGTGGCGTCAGGCATGGGTC
31710 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CCCGAGCGGCTCACCGACACCAGAGCCGGCCAT
31771 GTCGTCCCCGCGCGAGCGGGGGTGGTCC TCGCCTACGCCCGCCTGTGGTCCACCGCCCTGT
31832 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CGGCACAAGCTGCTGGCGGGTGTCGTCCGGCAG
31893 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CTGCGCACCGAACGCGACGAACTGCGAGAGGCA
31954 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CGGGCCGTTCTCGACCGGATCCGCGAGGCCAGC
32015 GTCGTCCCCGCGCGAGCGGGGGTGGTCC TGGTAGCCGTCCATGGTCTCCGCGCGGATCGCG
32076 GTCGTCCCCGCGCGAGCGGGGGTGGTCC CTGGTCACCTTCAGCCTCGGCCGGGTTGAACTGGTCGTCCCCTGTCGCATTGCACCTGTGGGGACGCCTGGACGGC
32180 GTCCTCCCCGCGCGAGCGGGGGTGGTCC CTTCGCGCGGTGCCAGGTGTAGCGAGTCGCCCA
32241 GTCGTCCCCGCGCGAGCGGGGGTGGTCG GCGTTTCCGGCCGGCGCGCGCCGCTGAGCGGGA
32302 GTCGTCCCCGCACGAGCGGGGTGGTCCC GAGTCCAAGGCCGTGGTCGTGAAGTTCAAGAA
32362 GTAGTCCCTGCGCGAGCGGGGTGATAGA -

PFAM Info

PFAM Domain Meaning GOTerms
PF09344 Cas_CT1975 CT1975-like protein N/A

Scaffold Families

F307292 , F360354 , F451334 , F468574 , F485446 , F495269 , F495975 , F495978