F307292

General Info

Members Datasets Scaffolds Average Seq Length
200 172 400 379

Family's Representative Sequence

Representative Sequence 3300026023|Ga0207677_10096344|Ga0207677_100963441
Length 452
Sequence MRVGIVCPYSFDVPGGVQGHVIDLTKALLARGHQVSVLAPADEDAELPEFVHPAGKALGIPYNGSVARLQFGPVSYARVRRWIREGDFDVLHLHEPAAPSLSLLALLIADGPIVATFHTATTRSRTLSAFQPVLRPLLEKITARIAVSALARRVQVEHAGGDAVEIPNGVDVGFFSSATPLPGYPRAGGTVGFVGRFGEPRKGMGVLLEALRRILPEFEDLRLVVVGRGDEEQLRRDAGPELAPHLELLGQADDATKARALRSVDVYCAPNTGGESFGMILTEAMAAGTPVLASGLDSFRRVLDDGHAGMLVETGDPAALADGLRELLGDPARRVSLAAAAGERVTMYDWSVVATQVLRVYETAVAADPRRVAAPEGELARCVCSAGCSRCSPWSWCWAASSWWRPRTGWTGCTSARTPAGPPRCWAPRACGCRPSVPKRRRGPSAKPRKTS

Samples

Sample ID Description Type Environment
1 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
41 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
42 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
67 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
68 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
69 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
70 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
71 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
72 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
85 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
86 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
87 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
88 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
93 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
104 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
110 2501939600 Micromonospora sp. L5 Isolate Unclassified
111 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
112 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
113 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
114 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
115 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
116 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
117 2582580736 Prauserella sp. Am3 Isolate Unclassified
118 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
119 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
120 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
121 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
122 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
123 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
124 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
125 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
126 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
127 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
128 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
129 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
130 2855683550 Micromonospora sp. RP3T Isolate Unclassified
131 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
132 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
133 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
134 2858868258 Micromonospora sp. MH33 Isolate Unclassified
135 2858882152 Micromonospora noduli MED15 Isolate Nodule
136 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
137 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
138 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
139 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
140 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
141 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
142 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
143 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
144 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
145 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
146 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
147 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
148 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
149 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
150 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
151 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
152 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
153 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
154 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
155 2902582711 Micromonospora sp. AP08 Isolate Unclassified
156 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
157 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
158 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
159 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
160 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
161 649633069 Micromonospora sp. L5 Isolate Unclassified
162 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
163 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
164 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
165 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
166 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
167 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
168 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
169 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
170 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
171 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
172 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 68.5
Metatranscriptomes 0
Isolates 31.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.5
Nodule 3
Rhizoplane 4.5
Rhizosphere 66
Stem 0
Stem Tuber 0.5
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207677_10096344 3300026023 Bacteria 2165
2 Ga0070683_100266041 3300005329 Bacteria 1631
3 Ga0068869_100119140 3300005334 Bacteria 2017
4 Ga0068868_100018559 3300005338 Bacteria 5203
5 Ga0068868_100062359 3300005338 Bacteria 2955
6 Ga0070668_100005790 3300005347 Bacteria 9165
7 Ga0070675_100000347 3300005354 Bacteria 31285
8 Ga0070675_100131960 3300005354 Bacteria 2129
9 Ga0070659_100176448 3300005366 Bacteria 1752
10 Ga0070714_100002007 3300005435 Bacteria 14885
11 Ga0070713_100130066 3300005436 Bacteria 2219
12 Ga0070710_10000073 3300005437 Bacteria 45559
13 Ga0070663_100000109 3300005455 Bacteria 38563
14 Ga0070663_100038849 3300005455 Bacteria 3323
15 Ga0070678_100033488 3300005456 Bacteria 3568
16 Ga0070662_100048357 3300005457 Bacteria 3064
17 Ga0070685_10102414 3300005466 Bacteria 1751
18 Ga0070684_100002096 3300005535 Bacteria 14684
19 Ga0070684_100214038 3300005535 Bacteria 1757
20 Ga0070664_100000579 3300005564 Bacteria 27883
21 Ga0068856_100158512 3300005614 Bacteria 2273
22 Ga0068852_100100488 3300005616 Bacteria 2610
23 Ga0068859_100040397 3300005617 Bacteria 4683
24 Ga0068863_100023094 3300005841 Bacteria 5944
25 Ga0068862_100114248 3300005844 Bacteria 2373
26 Ga0081455_10000765 3300005937 Bacteria 41740
27 Ga0081539_10000760 3300005985 Bacteria 63804
28 Ga0081539_10001061 3300005985 Bacteria 50266
29 Ga0081539_10006963 3300005985 Bacteria 10502
30 Ga0081539_10060307 3300005985 Bacteria 2084
31 Ga0070717_10043037 3300006028 Bacteria 3685
32 Ga0075428_100000283 3300006844 Bacteria 49810
33 Ga0075430_100224495 3300006846 Bacteria 1558
34 Ga0075431_100051026 3300006847 Bacteria 4266
35 Ga0097620_100040396 3300006931 Bacteria 4683
36 Ga0111539_10029488 3300009094 Bacteria 6682
37 Ga0105247_10173294 3300009101 Bacteria 1436
38 Ga0114129_10000769 3300009147 Bacteria 40967
39 Ga0114129_10250626 3300009147 Bacteria 2377
40 Ga0105243_10360277 3300009148 Bacteria 1338
41 Ga0105248_10026037 3300009177 Bacteria 6507
42 Ga0105249_10044663 3300009553 Bacteria 4029
43 Ga0105033_101047 3300009986 Bacteria 2225
44 Ga0105239_10285930 3300010375 Bacteria 1857
45 Ga0157372_10497299 3300013307 Bacteria 1422
46 Ga0157375_10520216 3300013308 Bacteria 1353
47 Ga0163163_10011138 3300014325 Bacteria 8140
48 Ga0157377_10034588 3300014745 Bacteria 2765
49 Ga0213873_10000097 3300021358 Bacteria 17578
50 Ga0207688_10086696 3300025901 Bacteria 1794
51 Ga0207657_10131115 3300025919 Bacteria 2054
52 Ga0207652_10106951 3300025921 Bacteria 2477
53 Ga0207681_10060363 3300025923 Bacteria 2603
54 Ga0207659_10008400 3300025926 Bacteria 6407
55 Ga0207700_10120223 3300025928 Bacteria 2129
56 Ga0207664_10012873 3300025929 Bacteria 5994
57 Ga0207690_10117355 3300025932 Bacteria 1927
58 Ga0207706_10016039 3300025933 Bacteria 6771
59 Ga0207670_10104357 3300025936 Bacteria 2030
60 Ga0207661_10015418 3300025944 Bacteria 5623
61 Ga0207712_10058537 3300025961 Bacteria 2723
62 Ga0207668_10001629 3300025972 Bacteria 13118
63 Ga0207658_10203144 3300025986 Bacteria 1656
64 Ga0207703_10299531 3300026035 Bacteria 1466
65 Ga0207678_10002202 3300026067 Bacteria 17593
66 Ga0207678_10076086 3300026067 Bacteria 2875
67 Ga0207678_10102686 3300026067 Bacteria 2441
68 Ga0207678_10120417 3300026067 Bacteria 2240
69 Ga0207708_10037316 3300026075 Bacteria 3702
70 Ga0207708_10048946 3300026075 Bacteria 3218
71 Ga0207641_10036749 3300026088 Bacteria 4088
72 Ga0207676_10015334 3300026095 Bacteria 5524
73 Ga0207674_10046723 3300026116 Bacteria 4443
74 Ga0207675_100144486 3300026118 Bacteria 2261
75 Ga0207698_10168225 3300026142 Bacteria 1927
76 Ga0268266_10115631 3300028379 Bacteria 2382
77 Ga0307515_10072821 3300028794 Bacteria 4629
78 Ga0307512_10016857 3300030522 Bacteria 6725
79 Ga0316176_1197360 3300030732 Bacteria 3099
80 Ga0314311_1097456 3300030733 Bacteria 4277
81 Ga0307513_10000040 3300031456 Bacteria 169846
82 Ga0307513_10004784 3300031456 Bacteria 17978
83 Ga0307513_10186229 3300031456 Bacteria 1933
84 Ga0307508_10000744 3300031616 Bacteria 38668
85 Ga0307508_10217202 3300031616 Bacteria 1512
86 Ga0307413_10012005 3300031824 Bacteria 4290
87 Ga0307413_10081727 3300031824 Bacteria 2073
88 Ga0307518_10000188 3300031838 Bacteria 47000
89 Ga0307410_10063841 3300031852 Bacteria 2528
90 Ga0326468_10000044 3300031889 Bacteria 9650
91 Ga0307406_10010494 3300031901 Bacteria 5227
92 Ga0307409_100006043 3300031995 Bacteria 7065
93 Ga0307409_100041890 3300031995 Bacteria 3425
94 Ga0307409_100086853 3300031995 Bacteria 2547
95 Ga0307416_100001007 3300032002 Bacteria 14935
96 Ga0307411_10001269 3300032005 Bacteria 10103
97 Ga0307415_100000052 3300032126 Bacteria 50285
98 Ga0307415_100040068 3300032126 Bacteria 3101
99 Ga0307415_100060953 3300032126 Bacteria 2610
100 Ga0307415_100066795 3300032126 Bacteria 2511
101 Ga0307507_10036857 3300033179 Bacteria 4989
102 Ga0307507_10195208 3300033179 Bacteria 1413
103 Ga0373925_0052638 3300037068 Bacteria 3042
104 Ga0373925_0267029 3300037068 Bacteria 1376
105 Ga0436364_1497982 3300037853 Bacteria 5651
106 Ga0436362_1046422 3300039453 Bacteria 20929
107 Ga0439436_0005124 3300041404 Bacteria 4016
108 Ga0439438_013885 3300041405 Bacteria 2412
109 Ga0439439_0000447 3300041406 Bacteria 6988
110 Ga0439449_0051595 3300042007 Bacteria 1521
111 Ga0439457_000689 3300042014 Bacteria 10008
112 Ga0466969_0017832 3300044656 Bacteria 3703
113 Ga0466972_0002797 3300044658 Bacteria 8642
114 Ga0466972_0057578 3300044658 Bacteria 1866
115 Ga0453683_0001725 3300044673 Bacteria 18123
116 Ga0466964_0015002 3300044706 Bacteria 2952
117 Ga0466964_0042651 3300044706 Bacteria 1839
118 Ga0466968_0000581 3300044735 Bacteria 12450
119 Ga0466968_0046061 3300044735 Bacteria 1852
120 Ga0466970_0018217 3300044765 Bacteria 3633
121 Ga0466960_0008228 3300044901 Bacteria 4265
122 Ga0466960_0024571 3300044901 Bacteria 2720
123 Ga0466967_0255690 3300045976 Bacteria 1675
124 Ga0495582_0090068 3300046473 Bacteria 1710
125 Ga0495672_0100215 3300047320 Bacteria 1573
126 Ga0496104_0018073 3300048907 Bacteria 6428
127 Ga0496105_0058088 3300048908 Bacteria 3193
128 Ga0496108_0007551 3300048911 Bacteria 8813
129 Ga0496108_0344658 3300048911 Bacteria 1300
130 Ga0496109_0006874 3300048912 Bacteria 9592
131 Ga0496110_0004004 3300048913 Bacteria 11351
132 Ga0496111_0002422 3300048914 Bacteria 11261
133 Ga0496112_0093104 3300048915 Bacteria 2983
134 Ga0496113_0048679 3300048916 Bacteria 3154
135 nmdc:mga05p37_9436_c1 3300050507 Bacteria 11552
136 nmdc:mga06r32_3146_c1 3300050510 Bacteria 14791
137 Ga0500600_0028873 3300053149 Bacteria 3279
138 2501945928 2501939600 Bacteria 6907073
139 2515494803 2515154088 Bacteria 5526283
140 2515718808 2515154129 Bacteria 5584369
141 2515755464 2515154137 Bacteria 5711575
142 2516083015 2515154202 Bacteria 5471270
143 2516090100 2515154203 Bacteria 5458536
144 2558914638 2558860112 Bacteria 9931328
145 2583150949 2582580736 Bacteria 5325865
146 2586060641 2585427649 Bacteria 9053857
147 2623587901 2622736626 Bacteria 7181580
148 2753074573 2751185734 Bacteria 8863695
149 2772643514 2772190715 Bacteria 6959372
150 2791910041 2791354901 Bacteria 8322202
151 2795782878 2795385470 Bacteria 8317180
152 2795796267 2795385472 Bacteria 6627535
153 2809589177 2808606522 Bacteria 9488490
154 2816510566 2816332139 Bacteria 9138787
155 2831936730 2831935698 Bacteria 5963223
156 2855674819 2855670206 Bacteria 7120389
157 2855680478 2855676851 Bacteria 7063653
158 2855687395 2855683550 Bacteria 7134265
159 2856861928 2856858025 Bacteria 7255264
160 2857292703 2857288857 Bacteria 7189066
161 2858851232 2858848962 Bacteria 6963058
162 2858871037 2858868258 Bacteria 7683772
163 2858884232 2858882152 Bacteria 7230291
164 2858890835 2858888857 Bacteria 7060307
165 2858899493 2858895516 Bacteria 7378898
166 2858906245 2858902515 Bacteria 7086037
167 2861520860 2861520306 Bacteria 8348283
168 2866614401 2866612099 Bacteria 7543886
169 2867305123 2867302475 Bacteria 7087181
170 2867317818 2867312974 Bacteria 7058875
171 2867320229 2867319477 Bacteria 7069771
172 2867508068 2867507094 Bacteria 6506033
173 2869048690 2869048445 Bacteria 6875584
174 2869067731 2869061728 Bacteria 7112407
175 2869073304 2869068681 Bacteria 7205615
176 2870725532 2870721527 Bacteria 9689237
177 2870785149 2870782633 Bacteria 9624083
178 2880492183 2880489317 Bacteria 7096270
179 2880500102 2880495981 Bacteria 7340502
180 2891327030 2891326441 Bacteria 6439512
181 2899365161 2899359706 Bacteria 10940472
182 2899376676 2899370129 Bacteria 6781179
183 2902586785 2902582711 Bacteria 6187705
184 2915771524 2915768154 Bacteria 8424322
185 2917739207 2917736166 Bacteria 9690793
186 2929222008 2929219909 Bacteria 6984360
187 2929228661 2929226422 Bacteria 7248583
188 2996227854 2996221748 Bacteria 6799777
189 649812528 649633069 Bacteria 6962533
190 8003315492 8003314358 Bacteria 10575343
191 8003832393 8003830390 Bacteria 6541657
192 8003857672 8003856774 Bacteria 7675274
193 8003876002 8003870546 Bacteria 7396674
194 8047718683 8047710418 Bacteria 11023148
195 8054476597 8054472261 Bacteria 7464355
196 8054707662 8054704163 Bacteria 7247792
197 8054730436 8054727385 Bacteria 7558670
198 8054739573 8054734606 Bacteria 6947278
199 8055417858 8055412473 Bacteria 6257500
200 8056059940 8056054917 Bacteria 5736694
201 Ga0207677_10096344
202 Ga0070683_100266041
203 Ga0068869_100119140
204 Ga0068868_100018559
205 Ga0068868_100062359
206 Ga0070668_100005790
207 Ga0070675_100000347
208 Ga0070675_100131960
209 Ga0070659_100176448
210 Ga0070714_100002007
211 Ga0070713_100130066
212 Ga0070710_10000073
213 Ga0070663_100000109
214 Ga0070663_100038849
215 Ga0070678_100033488
216 Ga0070662_100048357
217 Ga0070685_10102414
218 Ga0070684_100002096
219 Ga0070684_100214038
220 Ga0070664_100000579
221 Ga0068856_100158512
222 Ga0068852_100100488
223 Ga0068859_100040397
224 Ga0068863_100023094
225 Ga0068862_100114248
226 Ga0081455_10000765
227 Ga0081539_10000760
228 Ga0081539_10001061
229 Ga0081539_10006963
230 Ga0081539_10060307
231 Ga0070717_10043037
232 Ga0075428_100000283
233 Ga0075430_100224495
234 Ga0075431_100051026
235 Ga0097620_100040396
236 Ga0111539_10029488
237 Ga0105247_10173294
238 Ga0114129_10000769
239 Ga0114129_10250626
240 Ga0105243_10360277
241 Ga0105248_10026037
242 Ga0105249_10044663
243 Ga0105033_101047
244 Ga0105239_10285930
245 Ga0157372_10497299
246 Ga0157375_10520216
247 Ga0163163_10011138
248 Ga0157377_10034588
249 Ga0213873_10000097
250 Ga0207688_10086696
251 Ga0207657_10131115
252 Ga0207652_10106951
253 Ga0207681_10060363
254 Ga0207659_10008400
255 Ga0207700_10120223
256 Ga0207664_10012873
257 Ga0207690_10117355
258 Ga0207706_10016039
259 Ga0207670_10104357
260 Ga0207661_10015418
261 Ga0207712_10058537
262 Ga0207668_10001629
263 Ga0207658_10203144
264 Ga0207703_10299531
265 Ga0207678_10002202
266 Ga0207678_10076086
267 Ga0207678_10102686
268 Ga0207678_10120417
269 Ga0207708_10037316
270 Ga0207708_10048946
271 Ga0207641_10036749
272 Ga0207676_10015334
273 Ga0207674_10046723
274 Ga0207675_100144486
275 Ga0207698_10168225
276 Ga0268266_10115631
277 Ga0307515_10072821
278 Ga0307512_10016857
279 Ga0316176_1197360
280 Ga0314311_1097456
281 Ga0307513_10000040
282 Ga0307513_10004784
283 Ga0307513_10186229
284 Ga0307508_10000744
285 Ga0307508_10217202
286 Ga0307413_10012005
287 Ga0307413_10081727
288 Ga0307518_10000188
289 Ga0307410_10063841
290 Ga0326468_10000044
291 Ga0307406_10010494
292 Ga0307409_100006043
293 Ga0307409_100041890
294 Ga0307409_100086853
295 Ga0307416_100001007
296 Ga0307411_10001269
297 Ga0307415_100000052
298 Ga0307415_100040068
299 Ga0307415_100060953
300 Ga0307415_100066795
301 Ga0307507_10036857
302 Ga0307507_10195208
303 Ga0373925_0052638
304 Ga0373925_0267029
305 Ga0436364_1497982
306 Ga0436362_1046422
307 Ga0439436_0005124
308 Ga0439438_013885
309 Ga0439439_0000447
310 Ga0439449_0051595
311 Ga0439457_000689
312 Ga0466969_0017832
313 Ga0466972_0002797
314 Ga0466972_0057578
315 Ga0453683_0001725
316 Ga0466964_0015002
317 Ga0466964_0042651
318 Ga0466968_0000581
319 Ga0466968_0046061
320 Ga0466970_0018217
321 Ga0466960_0008228
322 Ga0466960_0024571
323 Ga0466967_0255690
324 Ga0495582_0090068
325 Ga0495672_0100215
326 Ga0496104_0018073
327 Ga0496105_0058088
328 Ga0496108_0007551
329 Ga0496108_0344658
330 Ga0496109_0006874
331 Ga0496110_0004004
332 Ga0496111_0002422
333 Ga0496112_0093104
334 Ga0496113_0048679
335 nmdc:mga05p37_9436_c1
336 nmdc:mga06r32_3146_c1
337 Ga0500600_0028873
338 2501945928
339 2515494803
340 2515718808
341 2515755464
342 2516083015
343 2516090100
344 2558914638
345 2583150949
346 2586060641
347 2623587901
348 2753074573
349 2772643514
350 2791910041
351 2795782878
352 2795796267
353 2809589177
354 2816510566
355 2831936730
356 2855674819
357 2855680478
358 2855687395
359 2856861928
360 2857292703
361 2858851232
362 2858871037
363 2858884232
364 2858890835
365 2858899493
366 2858906245
367 2861520860
368 2866614401
369 2867305123
370 2867317818
371 2867320229
372 2867508068
373 2869048690
374 2869067731
375 2869073304
376 2870725532
377 2870785149
378 2880492183
379 2880500102
380 2891327030
381 2899365161
382 2899376676
383 2902586785
384 2915771524
385 2917739207
386 2929222008
387 2929228661
388 2996227854
389 649812528
390 8003315492
391 8003832393
392 8003857672
393 8003876002
394 8047718683
395 8054476597
396 8054707662
397 8054730436
398 8054739573
399 8055417858
400 8056059940

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

14

174

0.96

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

188

330

0.92

PF00534

Glycos_transf_1

Glycosyl transferases group 1

186

344

0.91

PF13524

Glyco_trans_1_2

Glycosyl transferases group 1

201

359

0.82

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

15

169

0.82

PF13477

Glyco_trans_4_2

Glycosyl transferase 4-like

13

148

0.8

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

135

357

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gek-assembly1.cif.gz_A crystal structure of phosphatidylinositol mannosyltransferase (pima) from mycobacterium smegmatis in complex with gdp 0.925 4 382
2gek-assembly1.cif.gz_A crystal structure of phosphatidylinositol mannosyltransferase (pima) from mycobacterium smegmatis in complex with gdp 0.8981 4 382
4n9w-assembly1.cif.gz_A crystal structure of phosphatidyl mannosyltransferase pima 0.8933 3 382
4nc9-assembly6.cif.gz_D crystal structure of phosphatidyl mannosyltransferase pima 0.8789 3 382
4nc9-assembly5.cif.gz_A crystal structure of phosphatidyl mannosyltransferase pima 0.8688 2 382
ID Description Score Start End Superfamily
af_P9WMZ5_1_160_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9803 4 168 3.40.50.2000
af_P9WMZ5_1_160_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9743 4 168 3.40.50.2000
4nc9C02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9475 179 367 3.40.50.2000
4nc9C02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9418 179 367 3.40.50.2000
af_Q84QB1_230_385_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8986 195 364 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A4Q7JC95-F1-model_v4 Glycosyltransferase family 1 protein 0.9838 4 387 GO:0009058
GO:0016758
AF-A0A428YRR8-F1-model_v4 Glycosyltransferase family 1 protein 0.981 4 388 GO:0009058
GO:0016757
AF-A0A7K1UTQ1-F1-model_v4 Glycosyltransferase 0.9793 4 383 GO:0016758
AF-A0A2T0T3U2-F1-model_v4 Phosphatidylinositol alpha-mannosyltransferase 0.9786 4 388 GO:0009058
GO:0016758
AF-A0A1X1RGE8-F1-model_v4 Alpha-(1-2)-phosphatidylinositol mannosyltransferase 0.977 4 382 GO:0016758

Map