F461807

General Info

Members Datasets Scaffolds Average Seq Length
544 393 107 458

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2977858184|2977861144
Length 551
Sequence ALRLSWIAQPADRVRAHHINPGAALHRTGKAQGCRHYGCPVERSSHLKPKQSGAEPNKVGRVSPLYCGIVASFCPLVRIDWNQGFNRRARLGCGMQQKTANDIRMALANSSAENVPRYTSYPTTPHFHAGVDPVVARGWLDGLEGDDEISLYLHIPYCDRLCWFCACHTKQTRHYAPVATFLRSLHREIETVGGLVSGRGRVRAVHFGGGSPTMLKPDDILMLGTALRDRFDFLDDASLSVEIDPNDMDEGRLDAFAAIGMTRASLGVQDFDPKVQKAINREQSFALTKSIVDAVRARGVRSVNLDLLYGLPHQTCESVAATVTQALTLAPDRLALFGYAYVPWFKKHQTMIDEAWLPDSAARLGQSQLAARMIVDAGYQALGLDHFAKPQDALAVAARGGRIRRNFQGYTEDPCETLIGLGPSAISRFRQGYAQNIVATGEYEKAVDAGQLATVRGIELSADDQARAWLIERLMCNFTFSAIELVERFGNIGQRLLCEASRLAISGAGQLLRLDGEYFIVPEESRPLVRTVAAKFDKYFRNGTGRHSLAV

Samples

Sample ID Description Type Environment
1 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
2 2509276018 Mesorhizobium ciceri CMG6 Isolate Nodule
3 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
4 2510065059 Mesorhizobium ciceri WSM4083 Isolate Nodule
5 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
6 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
7 2512875024 Mesorhizobium loti R88b Isolate Nodule
8 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
9 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
10 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
11 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
12 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
13 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
14 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
15 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
16 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
17 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
18 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
19 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
20 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
21 2643221568 Rhizobium sp. Root564 Isolate Unclassified
22 2643221582 Rhizobium sp. Root651 Isolate Unclassified
23 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
24 2643221607 Rhizobium sp. Root73 Isolate Unclassified
25 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
26 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
27 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
28 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
29 2643221693 Rhizobium sp. Root491 Isolate Unclassified
30 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
31 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
32 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
33 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
34 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
35 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
36 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
37 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
38 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
39 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
40 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
41 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
42 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
43 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
44 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
45 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
46 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
47 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
48 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
49 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
50 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
51 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
52 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
53 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
54 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
55 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
56 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
57 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
58 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
59 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
60 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
61 2844009547 Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 Isolate Nodule
62 2847670302 Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 Isolate Nodule
63 2847686936 Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1 Isolate Nodule
64 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
65 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
66 2856328259 Mesorhizobium sp. Primo-B Isolate Nodule
67 2856334872 Mesorhizobium sp. M7A.F.Ca.US.005.03.1.1 Isolate Nodule
68 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
69 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
70 2856356410 Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 Isolate Nodule
71 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
72 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
73 2857367948 Mesorhizobium sp. M7A.F.Ca.US.002.01.1.1 Isolate Nodule
74 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
75 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
76 2869169390 Mesorhizobium sp. M7A.F.Ca.CA.001.10.2.1 Isolate Nodule
77 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
78 2869242130 Mesorhizobium sp. M7A.F.Ca.CA.004.11.2.1 Isolate Nodule
79 2869256925 Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 Isolate Nodule
80 2869264136 Mesorhizobium sp. M7A.F.Ca.CA.001.15.1.1 Isolate Nodule
81 2869271264 Mesorhizobium sp. M7A.F.Ca.AU.002.06.1.1 Isolate Nodule
82 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
83 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
84 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
85 2871435913 Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 Isolate Nodule
86 2871444079 Mesorhizobium sp. M1A.F.Ca.IN.020.06.1.1 Isolate Nodule
87 2871459585 Mesorhizobium sp. M7A.F.Ca.CA.001.09.1.1 Isolate Nodule
88 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
89 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
90 2871481445 Mesorhizobium sp. M7A.F.Ca.CA.004.02.1.1 Isolate Nodule
91 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
92 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
93 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
94 2874116593 Mesorhizobium sp. M7A.F.Ca.CA.004.08.2.1 Isolate Nodule
95 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
96 2874131515 Mesorhizobium sp. M7A.F.Ca.CA.001.05.1.1 Isolate Nodule
97 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
98 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
99 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
100 2874162495 Mesorhizobium sp. M7A.F.Ca.CA.002.11.2.1 Isolate Nodule
101 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
102 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
103 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
104 2876386047 Mesorhizobium sp. M7A.F.Ca.CA.004.07.1.1 Isolate Nodule
105 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
106 2876399893 Mesorhizobium sp. M7A.F.Ca.AU.002.03.1.1 Isolate Nodule
107 2876406927 Mesorhizobium sp. M7A.F.Ca.CA.002.03.2.1 Isolate Nodule
108 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
109 2876420981 Mesorhizobium sp. M7A.F.Ca.CA.004.08.1.1 Isolate Nodule
110 2878035449 Mesorhizobium sp. M3A.F.Ca.ET.201.01.1.1 Isolate Nodule
111 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
112 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
113 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
114 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
115 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
116 2878774303 Mesorhizobium sp. M7A.F.Ca.CA.002.15.1.1 Isolate Nodule
117 2878781027 Mesorhizobium sp. M7A.F.Ca.CA.001.12.2.1 Isolate Nodule
118 2878788777 Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 Isolate Nodule
119 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
120 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
121 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
122 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
123 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
124 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
125 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
126 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
127 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
128 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
129 2885326080 Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 Isolate Nodule
130 2885334103 Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 Isolate Nodule
131 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
132 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
133 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
134 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
135 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
136 2889016732 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 Isolate Nodule
137 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
138 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
139 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
140 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
141 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
142 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
143 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
144 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
145 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
146 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
147 2906328253 Mesorhizobium sp. M1A.T.Ca.IN.004.03.1.1 Isolate Nodule
148 2906354277 Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 Isolate Nodule
149 2906363423 Mesorhizobium sp. M7A.F.Ca.CA.001.14.1.1 Isolate Nodule
150 2906370794 Mesorhizobium sp. M7A.F.Ca.CA.001.13.1.1 Isolate Nodule
151 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
152 2906386501 Mesorhizobium sp. M7A.F.Ca.CA.003.01.2.1 Isolate Nodule
153 2906393657 Mesorhizobium sp. M7A.F.Ca.CA.001.11.2.1 Isolate Nodule
154 2906401398 Mesorhizobium sp. M7A.F.Ca.CA.004.10.1.1 Isolate Nodule
155 2906408224 Mesorhizobium sp. M7A.F.Ca.CA.002.03.1.1 Isolate Nodule
156 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
157 2906427513 Mesorhizobium sp. M7A.F.Ca.CA.004.05.1.1 Isolate Nodule
158 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
159 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
160 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
161 2922130491 Mesorhizobium sp. M00.F.Ca.ET.038.03.1.1 Isolate Nodule
162 2922151315 Mesorhizobium sp. M7A.F.Ca.US.007.01.2.1 Isolate Nodule
163 2922158528 Mesorhizobium sp. M1A.F.Ca.IN.022.05.2.1 Isolate Nodule
164 2922172374 Mesorhizobium sp. M7A.F.Ca.CA.002.06.1.1 Isolate Nodule
165 2922178524 Mesorhizobium sp. M7A.F.Ca.CA.002.09.1.1 Isolate Nodule
166 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
167 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
168 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
169 2924726620 Mesorhizobium sp. M1A.F.Ca.IN.020.03.2.1 Isolate Nodule
170 2924733363 Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 Isolate Nodule
171 2924741084 Mesorhizobium sp. M7A.F.Ca.CA.004.09.1.2 Isolate Nodule
172 2924748358 Mesorhizobium sp. M7A.F.Ca.CA.002.14.1.2 Isolate Nodule
173 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
174 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
175 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
176 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
177 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
178 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
179 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
180 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
181 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
182 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
183 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
184 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
185 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
186 2937861824 Mesorhizobium sp. M7A.F.Ca.CA.001.07.2.1 Isolate Nodule
187 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
188 2937891427 Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 Isolate Nodule
189 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
190 2937980651 Mesorhizobium sp. M7A.F.Ca.CA.004.04.2.1 Isolate Nodule
191 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
192 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
193 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
194 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
195 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
196 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
197 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
198 2958108152 Mesorhizobium sp. M7A.F.Ca.CA.004.11.1.1 Isolate Nodule
199 2958115193 Mesorhizobium sp. M00.F.Ca.ET.217.01.1.1 Isolate Nodule
200 2958122699 Mesorhizobium sp. M7A.F.Ca.US.001.04.2.1 Isolate Nodule
201 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
202 2958137437 Mesorhizobium sp. M7A.F.Ca.CA.002.04.1.1 Isolate Nodule
203 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
204 2958158011 Mesorhizobium sp. M7A.F.Ca.CA.002.15.2.1 Isolate Nodule
205 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
206 2958172287 Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 Isolate Nodule
207 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
208 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
209 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
210 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
211 2961136820 Mesorhizobium sp. M7A.F.Ca.AU.001.01.1.1 Isolate Nodule
212 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
213 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
214 2961183825 Mesorhizobium sp. M7A.F.Ca.CA.001.12.1.1 Isolate Nodule
215 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
216 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
217 2965025482 Mesorhizobium sp. Primo-A Isolate Nodule
218 2965032056 Mesorhizobium sp. M7A.F.Ca.US.006.04.2.1 Isolate Nodule
219 2965040258 Mesorhizobium sp. M7A.F.Ca.CA.001.06.1.1 Isolate Nodule
220 2965047637 Mesorhizobium sp. M7A.F.Ca.US.014.04.1.1 Isolate Nodule
221 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
222 2965089291 Mesorhizobium sp. M7A.F.Ca.CA.001.04.1.1 Isolate Nodule
223 2965102966 Mesorhizobium sp. M7A.F.Ca.AU.002.02.1.1 Isolate Nodule
224 2965110997 Mesorhizobium sp. M7A.F.Ca.US.003.02.2.1 Isolate Nodule
225 2965119406 Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 Isolate Nodule
226 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
227 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
228 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
229 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
230 2968097103 Mesorhizobium sp. M1A.F.Ca.IN.020.30.1.1 Isolate Nodule
231 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
232 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
233 2968138860 Mesorhizobium sp. M7A.F.Ca.ET.027.03.2.1 Isolate Nodule
234 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
235 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
236 2970489779 Mesorhizobium sp. M7A.F.Ca.US.008.03.1.1 Isolate Nodule
237 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
238 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
239 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
240 2970532167 Mesorhizobium sp. M7A.F.Ca.CA.002.05.1.1 Isolate Nodule
241 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
242 2970547951 Mesorhizobium sp. M7A.F.Ca.AU.002.04.1.1 Isolate Nodule
243 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
244 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
245 2970619444 Mesorhizobium sp. M7A.F.Ca.ET.027.02.1.1 Isolate Nodule
246 2970627176 Mesorhizobium sp. M7A.F.Ca.US.006.01.2.1 Isolate Nodule
247 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
248 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
249 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
250 2977851361 Mesorhizobium sp. M7A.F.Ca.CA.004.06.2.1 Isolate Nodule
251 2977858184 Mesorhizobium sp. M1A.F.Ca.IN.020.03.1.1 Isolate Nodule
252 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
253 2977872689 Mesorhizobium sp. M7A.F.Ca.US.001.04.1.1 Isolate Nodule
254 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
255 2977907340 Mesorhizobium sp. M7A.F.Ca.CA.004.12.1.1 Isolate Nodule
256 2977915119 Mesorhizobium sp. M7A.F.Ca.CA.001.09.2.1 Isolate Nodule
257 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
258 2977935797 Mesorhizobium sp. M7A.F.Ca.CA.002.12.1.1 Isolate Nodule
259 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
260 2977950692 Mesorhizobium sp. M7A.F.Ca.CA.001.04.2.1 Isolate Nodule
261 2977957713 Mesorhizobium sp. M7A.F.Ca.US.001.02.1.1 Isolate Nodule
262 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
263 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
264 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
265 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
266 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
267 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
268 2979764755 Mesorhizobium sp. M7A.F.Ca.CA.004.05.2.1 Isolate Nodule
269 2979772303 Mesorhizobium sp. M7A.F.Ca.CA.004.04.1.1 Isolate Nodule
270 2979779861 Mesorhizobium sp. M1A.F.Ca.IN.022.02.1.1 Isolate Nodule
271 2979793036 Mesorhizobium sp. M7A.F.Ca.US.007.01.1.1 Isolate Nodule
272 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
273 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
274 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
275 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
276 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
277 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
278 2987645492 Mesorhizobium sp. M7A.F.Ca.CA.002.10.1.1 Isolate Nodule
279 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
280 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
281 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
282 2987673487 Mesorhizobium sp. M7A.F.Ca.US.003.02.1.1 Isolate Nodule
283 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
284 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
285 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
286 2996341866 Mesorhizobium sp. M1A.F.Ca.IN.020.32.1.1 Isolate Nodule
287 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
288 2996386984 Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 Isolate Nodule
289 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
290 3004167301 Mesorhizobium loti 582 Isolate Unclassified
291 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
292 3004195979 Mesorhizobium sp. M7A.F.Ca.CA.001.08.2.1 Isolate Nodule
293 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
294 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
295 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
296 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
297 3004239961 Mesorhizobium sp. M7A.F.Ca.US.005.03.2.1 Isolate Nodule
298 3004248173 Mesorhizobium sp. M7A.F.Ca.CA.004.06.1.1 Isolate Nodule
299 3004268573 Mesorhizobium sp. M7A.F.Ca.US.010.02.1.1 Isolate Nodule
300 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
301 3004289098 Mesorhizobium sp. M8A.F.Ca.ET.023.02.2.1 Isolate Nodule
302 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
303 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
304 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
305 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
306 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
307 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
308 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
309 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
310 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
311 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
312 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
313 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
314 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
315 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
316 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
317 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
318 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
319 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
320 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
321 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
322 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
323 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
324 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
325 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
326 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
327 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
328 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
329 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
330 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
331 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
332 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
333 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
334 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
335 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
336 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
337 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
338 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
339 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
340 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
341 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
342 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
343 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
344 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
345 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
346 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
347 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
348 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
349 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
350 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
351 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
352 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
353 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
354 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
355 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
356 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
357 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
358 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
359 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
360 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
361 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
362 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
363 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
364 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
365 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
366 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
367 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
368 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
369 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
370 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
371 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
372 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
373 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
374 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
375 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
376 649633066 Mesorhizobium ciceri bv. biserrulae WSM1271 Isolate Nodule
377 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
378 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
379 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
380 8004312739 Mesorhizobium sp. M7A.F.Ca.MR.362.00.0.0 Isolate Nodule
381 8004361976 Mesorhizobium sp. M7A.F.Ca.CA.001.08.1.1 Isolate Nodule
382 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
383 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
384 8004395343 Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 Isolate Nodule
385 8004445564 Mesorhizobium sp. M1A.F.Ca.IN.020.04.1.1 Isolate Nodule
386 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
387 8004695233 Mesorhizobium sp. M7A.F.Ca.US.001.01.1.1 Isolate Nodule
388 8004703790 Mesorhizobium sp. M00.F.Ca.ET.158.01.1.1 Isolate Nodule
389 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
390 8004727605 Mesorhizobium sp. M7A.F.Ca.CA.004.01.1.1 Isolate Nodule
391 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
392 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
393 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 19.67
Metatranscriptomes 0
Isolates 80.33

Biome Distribution

Category Percentage (%)
Aerial Root 0.74
Bulb 0
Endosphere 7.35
Nodule 68.01
Rhizoplane 0.92
Rhizosphere 9.01
Stem 0
Stem Tuber 0
Unclassified 13.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10004933 3300001989 Bacteria 5081
2 JGI25162J39368_1000452 3300002737 Bacteria 32183
3 JGI25165J46597_1000006 3300003214 Bacteria 529784
4 JGI25165J46597_1000116 3300003214 Bacteria 137942
5 Ga0055542_1000866 3300003762 Bacteria 21223
6 Ga0070658_10020491 3300005327 Bacteria 5300
7 Ga0068867_100112462 3300005459 Bacteria 2094
8 Ga0070665_100039047 3300005548 Bacteria 4774
9 Ga0068852_100016311 3300005616 Bacteria 5788
10 Ga0075365_10000778 3300006038 Bacteria 13010
11 Ga0075365_10004587 3300006038 Bacteria 7348
12 Ga0075365_10059630 3300006038 Bacteria 2544
13 Ga0075368_10033867 3300006042 Bacteria 1989
14 Ga0075363_100041590 3300006048 Bacteria 2425
15 Ga0075364_10013612 3300006051 Bacteria 5007
16 Ga0075364_10047207 3300006051 Bacteria 2805
17 Ga0075362_10008103 3300006177 Bacteria 4007
18 Ga0075367_10027579 3300006178 Bacteria 3232
19 Ga0075367_10040918 3300006178 Bacteria 2707
20 Ga0075369_10007980 3300006186 Bacteria 4055
21 Ga0075369_10014587 3300006186 Bacteria 3142
22 Ga0075369_10023247 3300006186 Bacteria 2562
23 Ga0075370_10023520 3300006353 Bacteria 3394
24 Ga0099826_10000184 3300006948 Bacteria 26251
25 Ga0099826_10017486 3300006948 Bacteria 5415
26 Ga0105240_10061150 3300009093 Bacteria 4694
27 Ga0105240_10088298 3300009093 Bacteria 3794
28 Ga0105243_10043084 3300009148 Bacteria 3537
29 Ga0105238_10019676 3300009551 Bacteria 6874
30 Ga0105239_10003256 3300010375 Bacteria 20044
31 Ga0105239_10033934 3300010375 Bacteria 5602
32 Ga0105239_10034093 3300010375 Bacteria 5589
33 Ga0157371_10000015 3300013102 Bacteria 339838
34 Ga0157370_10001762 3300013104 Bacteria 26694
35 Ga0157370_10025461 3300013104 Bacteria 5857
36 Ga0157369_10065748 3300013105 Bacteria 3902
37 Ga0157369_10114212 3300013105 Bacteria 2868
38 Ga0157374_10152224 3300013296 Bacteria 2249
39 Ga0182008_10003594 3300014497 Bacteria 9280
40 Ga0182008_10057303 3300014497 Bacteria 1924
41 Ga0182006_1010464 3300015261 Bacteria 4125
42 Ga0182007_10032205 3300015262 Bacteria 1782
43 Ga0209437_100128 3300025233 Bacteria 190300
44 Ga0209148_1000312 3300025254 Bacteria 69409
45 Ga0209233_1000010 3300025261 Bacteria 1194329
46 Ga0209233_1000072 3300025261 Bacteria 363074
47 Ga0209233_1007452 3300025261 Bacteria 3465
48 Ga0209455_1000150 3300025272 Bacteria 130892
49 Ga0209025_1000094 3300025294 Bacteria 241080
50 Ga0209758_1014654 3300025297 Bacteria 4148
51 Ga0207647_10002724 3300025904 Bacteria 13338
52 Ga0207647_10033164 3300025904 Bacteria 3309
53 Ga0207705_10017639 3300025909 Bacteria 5109
54 Ga0207695_10169383 3300025913 Bacteria 2110
55 Ga0207657_10032537 3300025919 Bacteria 4710
56 Ga0207669_10138530 3300025937 Bacteria 1685
57 Ga0207639_10104181 3300026041 Bacteria 2300
58 Ga0207698_10009993 3300026142 Bacteria 6075
59 Ga0209281_1000036 3300027111 Bacteria 369415
60 Ga0209281_1000047 3300027111 Bacteria 326514
61 Ga0209282_1059535 3300027666 Bacteria 2136
62 Ga0209813_10016947 3300027866 Bacteria 1995
63 Ga0268266_10018935 3300028379 Bacteria 5865
64 Ga0307414_10137459 3300032004 Bacteria 1908
65 Ga0395901_0014995 3300038443 Bacteria 7877
66 Ga0496112_0030798 3300048915 Bacteria 5197
67 Ga0496113_0008199 3300048916 Bacteria 6790
68 Ga0496116_0000043 3300048919 Bacteria 328085
69 Ga0496116_0004065 3300048919 Bacteria 14149
70 Ga0496117_0000002 3300048920 Bacteria 2483758
71 Ga0496118_0000355 3300048921 Bacteria 77500
72 Ga0496119_0025458 3300048922 Bacteria 4132
73 Ga0496119_0040681 3300048922 Bacteria 2970
74 Ga0496120_0000496 3300048923 Bacteria 61562
75 Ga0496120_0001517 3300048923 Bacteria 27372
76 Ga0496121_0006013 3300048924 Bacteria 15314
77 Ga0496121_0095504 3300048924 Bacteria 2310
78 Ga0496121_0152195 3300048924 Bacteria 1701
79 Ga0496122_0000001 3300048925 Bacteria 1827766
80 Ga0496122_0023254 3300048925 Bacteria 5472
81 Ga0496123_0000001 3300048926 Bacteria 1831497
82 Ga0496123_0046215 3300048926 Bacteria 2954
83 Ga0496123_0067238 3300048926 Bacteria 2264
84 Ga0496124_0000112 3300048927 Bacteria 166282
85 Ga0496125_0000001 3300048928 Bacteria 1766138
86 Ga0496125_0001127 3300048928 Bacteria 40785
87 Ga0496125_0030395 3300048928 Bacteria 4833
88 Ga0496126_0000362 3300048929 Bacteria 94734
89 Ga0496126_0023496 3300048929 Bacteria 5974
90 Ga0496126_0041417 3300048929 Bacteria 4262
91 Ga0496126_0232137 3300048929 Bacteria 1545
92 Ga0501034_0102456 3300049571 Bacteria 2856
93 Ga0501036_0071489 3300049572 Bacteria 2934
94 Ga0501044_0047209 3300049823 Bacteria 4455
95 nmdc:mga03n38_25975_c1 3300050490 Bacteria 2413
96 nmdc:mga00v17_10621_c1 3300050491 Bacteria 5034
97 nmdc:mga00v17_6_c1 3300050491 Bacteria 179509
98 nmdc:mga00v17_97223_c1 3300050491 Bacteria 1855
99 nmdc:mga0k408_51177_c1 3300050493 Bacteria 2392
100 nmdc:mga07m45_7477_c1 3300050496 Bacteria 5584
101 nmdc:mga0sz30_55874_c1 3300050516 Bacteria 1680
102 nmdc:mga0sz30_8472_c1 3300050516 Bacteria 3885
103 nmdc:mga0sz30_94_c1 3300050516 Bacteria 34557
104 Ga0500560_000208 3300053107 Bacteria 7010
105 Ga0500572_002104 3300053111 Bacteria 4928
106 Ga0500624_000977 3300053157 Bacteria 5830
107 Ga0500636_0011063 3300053177 Bacteria 5279

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2871474448 2871478841 441
2 iso_pu_bacteria 2878788777 2878794985 441
3 3300009093 Ga0105240_10061150 Ga0105240_100611504 443
4 3300010375 Ga0105239_10033934 Ga0105239_100339343 443
5 3300048929 Ga0496126_0232137 Ga0496126_0232137_22_1353 443
6 iso_pu_bacteria 2856364286 2856366999 443
7 iso_pu_bacteria 2869285874 2869289040 443
8 iso_pu_bacteria 2871429161 2871432209 443
9 iso_pu_bacteria 2874146452 2874151220 443
10 iso_pu_bacteria 2874155637 2874158854 443
11 iso_pu_bacteria 2876413966 2876417273 443
12 iso_pu_bacteria 2878745973 2878748986 443
13 iso_pu_bacteria 2903492973 2903503388 443
14 iso_pu_bacteria 2906308376 2906311280 443
15 iso_pu_bacteria 2906321335 2906324056 443
16 iso_pu_bacteria 2937813078 2937816962 443
17 iso_pu_bacteria 2958130278 2958133370 443
18 iso_pu_bacteria 2958179912 2958183033 443
19 iso_pu_bacteria 2961077736 2961080997 443
20 iso_pu_bacteria 2977843712 2977847253 443
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413 iso_pu_bacteria 2922185730 2922186088 457
414 iso_pu_bacteria 2924710171 2924713346 457
415 iso_pu_bacteria 2924718760 2924721757 457
416 iso_pu_bacteria 2924726620 2924732067 457
417 iso_pu_bacteria 2924733363 2924740139 457
418 iso_pu_bacteria 2924741084 2924746652 457
419 iso_pu_bacteria 2924748358 2924754194 457
420 iso_pu_bacteria 2924754689 2924757383 457
421 iso_pu_bacteria 2924762789 2924768723 457
422 iso_pu_bacteria 2924776078 2924779241 457
423 iso_pu_bacteria 2924784321 2924784350 457
424 iso_pu_bacteria 2924784321 2924790544 457
425 iso_pu_bacteria 2937813078 2937817596 457
426 iso_pu_bacteria 2937848649 2937854903 457
427 iso_pu_bacteria 2937861824 2937867262 457
428 iso_pu_bacteria 2937877337 2937880211 457
429 iso_pu_bacteria 2937972304 2937979279 457
430 iso_pu_bacteria 2937980651 2937985033 457
431 iso_pu_bacteria 2937994558 2937996881 457
432 iso_pu_bacteria 2958034702 2958040953 457
433 iso_pu_bacteria 2958041894 2958057447 457
434 iso_pu_bacteria 2958071322 2958073892 457
435 iso_pu_bacteria 2958084443 2958087264 457
436 iso_pu_bacteria 2958100919 2958102590 457
437 iso_pu_bacteria 2958108152 2958111022 457
438 iso_pu_bacteria 2958115193 2958115280 457
439 iso_pu_bacteria 2958122699 2958123089 457
440 iso_pu_bacteria 2958130278 2958132622 457
441 iso_pu_bacteria 2958137437 2958142226 457
442 iso_pu_bacteria 2958144490 2958150146 457
443 iso_pu_bacteria 2958158011 2958163116 457
444 iso_pu_bacteria 2958165035 2958167349 457
445 iso_pu_bacteria 2958172287 2958177278 457
446 iso_pu_bacteria 2958179912 2958182436 457
447 iso_pu_bacteria 2961077736 2961080281 457
448 iso_pu_bacteria 2961114664 2961118413 457
449 iso_pu_bacteria 2961127735 2961132333 457
450 iso_pu_bacteria 2961136820 2961142036 457
451 iso_pu_bacteria 2961163497 2961165822 457
452 iso_pu_bacteria 2961170736 2961173556 457
453 iso_pu_bacteria 2961170736 2961177650 457
454 iso_pu_bacteria 2961183825 2961189914 457
455 iso_pu_bacteria 2963644680 2963650548 457
456 iso_pu_bacteria 2965018300 2965020641 457
457 iso_pu_bacteria 2965032056 2965039615 457
458 iso_pu_bacteria 2965040258 2965041593 457
459 iso_pu_bacteria 2965047637 2965050148 457
460 iso_pu_bacteria 2965062239 2965062408 457
461 iso_pu_bacteria 2965089291 2965096521 457
462 iso_pu_bacteria 2965102966 2965106165 457
463 iso_pu_bacteria 2965110997 2965112234 457
464 iso_pu_bacteria 2965119406 2965121130 457
465 iso_pu_bacteria 2967996073 2967997304 457
466 iso_pu_bacteria 2968003550 2968005849 457
467 iso_pu_bacteria 2968003550 2968010624 457
468 iso_pu_bacteria 2968016561 2968022545 457
469 iso_pu_bacteria 2968097103 2968103223 457
470 iso_pu_bacteria 2968110612 2968114474 457
471 iso_pu_bacteria 2968138860 2968143686 457
472 iso_pu_bacteria 2968171901 2968174221 457
473 iso_pu_bacteria 2970469710 2970475129 457
474 iso_pu_bacteria 2970489779 2970491303 457
475 iso_pu_bacteria 2970503327 2970506148 457
476 iso_pu_bacteria 2970503327 2970510328 457
477 iso_pu_bacteria 2970510686 2970513939 457
478 iso_pu_bacteria 2970524798 2970530942 457
479 iso_pu_bacteria 2970532167 2970532731 457
480 iso_pu_bacteria 2970540015 2970545950 457
481 iso_pu_bacteria 2970547951 2970554065 457
482 iso_pu_bacteria 2970554993 2970557311 457
483 iso_pu_bacteria 2970593180 2970599864 457
484 iso_pu_bacteria 2970619444 2970627009 457
485 iso_pu_bacteria 2970627176 2970630730 457
486 iso_pu_bacteria 2977821940 2977827993 457
487 iso_pu_bacteria 2977821940 2977828138 457
488 iso_pu_bacteria 2977828996 2977835128 457
489 iso_pu_bacteria 2977828996 2977835913 457
490 iso_pu_bacteria 2977843712 2977847884 457
491 iso_pu_bacteria 2977851361 2977856162 457
492 iso_pu_bacteria 2977858184 2977861144 457
493 iso_pu_bacteria 2977872689 2977877222 457
494 iso_pu_bacteria 2977898635 2977903169 457
495 iso_pu_bacteria 2977907340 2977910831 457
496 iso_pu_bacteria 2977915119 2977917174 457
497 iso_pu_bacteria 2977922695 2977923795 457
498 iso_pu_bacteria 2977935797 2977937888 457
499 iso_pu_bacteria 2977950692 2977956213 457
500 iso_pu_bacteria 2977957713 2977960195 457
501 iso_pu_bacteria 2977971508 2977979162 457
502 iso_pu_bacteria 2977986579 2977993069 457
503 iso_pu_bacteria 2979710463 2979715746 457
504 iso_pu_bacteria 2979764755 2979766415 457
505 iso_pu_bacteria 2979772303 2979772629 457
506 iso_pu_bacteria 2979779861 2979781047 457
507 iso_pu_bacteria 2979793036 2979798818 457
508 iso_pu_bacteria 2979808191 2979810870 457
509 iso_pu_bacteria 2979808191 2979815201 457
510 iso_pu_bacteria 2987636660 2987644226 457
511 iso_pu_bacteria 2987645492 2987649870 457
512 iso_pu_bacteria 2987652177 2987659471 457
513 iso_pu_bacteria 2987659509 2987661828 457
514 iso_pu_bacteria 2987666974 2987671202 457
515 iso_pu_bacteria 2987673487 2987675501 457
516 iso_pu_bacteria 2996341866 2996345415 457
517 iso_pu_bacteria 2996348954 2996353445 457
518 iso_pu_bacteria 2996386984 2996393382 457
519 iso_pu_bacteria 3000135777 3000141722 457
520 iso_pu_bacteria 3004188549 3004190877 457
521 iso_pu_bacteria 3004195979 3004201526 457
522 iso_pu_bacteria 3004203850 3004208375 457
523 iso_pu_bacteria 3004211236 3004212865 457
524 iso_pu_bacteria 3004218560 3004220544 457
525 iso_pu_bacteria 3004232784 3004239921 457
526 iso_pu_bacteria 3004239961 3004240359 457
527 iso_pu_bacteria 3004248173 3004249234 457
528 iso_pu_bacteria 3004268573 3004271202 457
529 iso_pu_bacteria 3004275668 3004280127 457
530 iso_pu_bacteria 3004289098 3004296315 457
531 iso_pu_bacteria 8004312739 8004320193 457
532 iso_pu_bacteria 8004361976 8004363445 457
533 iso_pu_bacteria 8004374579 8004380969 457
534 iso_pu_bacteria 8004374579 8004381118 457
535 iso_pu_bacteria 8004387939 8004390007 457
536 iso_pu_bacteria 8004395343 8004400237 457
537 iso_pu_bacteria 8004445564 8004447792 457
538 iso_pu_bacteria 8004445564 8004449858 457
539 iso_pu_bacteria 8004633249 8004636528 457
540 iso_pu_bacteria 8004695233 8004699615 457
541 iso_pu_bacteria 8004703790 8004714036 457
542 iso_pu_bacteria 8004714634 8004718404 457
543 iso_pu_bacteria 8004727605 8004732868 457
544 iso_pu_bacteria 8055617313 8055623965 457

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

152

326

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.9407 24 445
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.9114 24 445
7n7i-assembly3.cif.gz_C x-ray crystal structure of viperin-like enzyme from trichoderma virens 0.7529 55 243
6b4c-assembly1.cif.gz_A structure of viperin from trichoderma virens 0.7471 56 243
6b4c-assembly9.cif.gz_I structure of viperin from trichoderma virens 0.73 56 243
ID Description Score Start End Superfamily
af_P32131_50_279_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9456 52 281 3.20.20.70
af_P32131_50_279_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9377 52 281 3.20.20.70
af_A4HWS3_271_391_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8783 144 221 3.80.30.20
af_Q2FXY9_7_216_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8753 58 272 3.80.30.20
af_P9WP73_8_223_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8679 58 266 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A529PQF8-F1-model_v4 coproporphyrinogen dehydrogenase (EC 1.3.98.3) 0.9623 60 457 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A529TU25-F1-model_v4 coproporphyrinogen dehydrogenase (EC 1.3.98.3) 0.9611 67 457 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A529TU25-F1-model_v4 coproporphyrinogen dehydrogenase (EC 1.3.98.3) 0.9587 67 457 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A529PQF8-F1-model_v4 coproporphyrinogen dehydrogenase (EC 1.3.98.3) 0.9576 60 457 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A2W5A609-F1-model_v4 Coproporphyrinogen III oxidase 0.9546 15 343 GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989

Feature Viewer

pLDDT pTM Quality
87.26 0.87 High
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Predicted Structure (AlphaFold2)

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