F454593

General Info

Members Datasets Scaffolds Average Seq Length
494 302 988 199

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100264393|Ga0307416_1002643932
Length 232
Sequence MRAAQPSGGATLNVRSWESVHEKLGTMPSTTDTASTAAAKRGRPGYDQQSVLLIAVDVFNRHGYDATSMGILAENLGISKSAIYHHVPSKGDLLKLALDHALGGLEAILEQPQATSGPADARLEFVLRQTVAVLVERLPFVTLLLRLRGNTEIERAALERRRTFDHEVAALISAARDEGSLRQDIDPRTVTRLLFGTINSIVEWYKPGGSLSPEKLADDVITIAFDGLHAAH

Samples

Sample ID Description Type Environment
1 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
5 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
52 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
71 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
114 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
123 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
124 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
132 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
133 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
134 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
135 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
136 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
137 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
138 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
139 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
140 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
141 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
142 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
143 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
144 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
145 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
146 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
147 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
148 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
149 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
150 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
151 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
152 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
153 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
154 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
155 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
156 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
157 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
158 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
159 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
160 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
161 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
162 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
163 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
164 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
165 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
166 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
167 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
168 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
169 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
170 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
171 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
172 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
173 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
174 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
175 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
176 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
177 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
178 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
179 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
180 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
181 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
182 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
183 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
184 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
185 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
186 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
187 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
188 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
189 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
190 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
191 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
192 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
193 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
194 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
195 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
196 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
197 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
198 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
199 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
200 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
201 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
202 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
203 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
204 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
205 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
206 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
207 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
208 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
209 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
210 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
211 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
212 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
213 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
214 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
215 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
216 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
217 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
218 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
219 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
220 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
221 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
222 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
223 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
224 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
225 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
226 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
227 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
228 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
229 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
230 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
231 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
232 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
233 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
234 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
235 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
236 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
237 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
238 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
239 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
240 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
241 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
242 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
243 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
244 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
245 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
246 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
247 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
248 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
249 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
250 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
251 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
252 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
253 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
254 2739367653 Kocuria sp. OV113 Isolate Unclassified
255 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
256 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
257 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
258 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
259 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
260 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
261 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
262 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
263 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
264 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
265 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
266 2857727296 Kocuria sp. R-72562 Isolate Unclassified
267 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
268 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
269 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
270 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
271 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
272 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
273 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
274 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
275 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
276 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
277 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
278 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
279 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
280 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
281 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
282 2920879853 Kocuria salina CV6 Isolate Unclassified
283 2931396565 Pseudomonas sp. DR48 Isolate Rhizosphere
284 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
285 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
286 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
287 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
288 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
289 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
290 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
291 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
292 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
293 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
294 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
295 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
296 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
297 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
298 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
299 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
300 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
301 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
302 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.26
Metatranscriptomes 0.81
Isolates 10.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.07
Nodule 0
Rhizoplane 5.87
Rhizosphere 80.16
Stem 0
Stem Tuber 0.2
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307416_100264393 3300032002 Bacteria 1684
2 LJQas_1000765 3300000549 Bacteria 5099
3 LJQas_1001400 3300000549 Bacteria 3614
4 rootL2_10182011 3300003322 Bacteria 3571
5 rootL2_10313541 3300003322 Bacteria 1312
6 Ga0055542_1006246 3300003762 Bacteria 2572
7 JGI25405J52794_10008648 3300003911 Bacteria 1907
8 Ga0065712_10162004 3300005290 Bacteria 1296
9 Ga0070676_10094680 3300005328 Bacteria 1835
10 Ga0070670_100627225 3300005331 Bacteria 963
11 Ga0070677_10003184 3300005333 Bacteria 5280
12 Ga0070666_10169708 3300005335 Bacteria 1528
13 Ga0070682_100082999 3300005337 Bacteria 2079
14 Ga0070660_100200382 3300005339 Bacteria 1619
15 Ga0070689_100405222 3300005340 Bacteria 1153
16 Ga0070691_10028813 3300005341 Bacteria 2597
17 Ga0070687_100017952 3300005343 Bacteria 3264
18 Ga0070692_10003361 3300005345 Bacteria 6478
19 Ga0070668_100051202 3300005347 Bacteria 3181
20 Ga0070669_100003031 3300005353 Bacteria 12084
21 Ga0070675_100036794 3300005354 Bacteria 3985
22 Ga0070675_100132186 3300005354 Bacteria 2128
23 Ga0070671_100097287 3300005355 Bacteria 2468
24 Ga0070671_100968705 3300005355 Bacteria 745
25 Ga0070674_100020050 3300005356 Bacteria 4262
26 Ga0070674_100407150 3300005356 Bacteria 1113
27 Ga0070673_100113159 3300005364 Bacteria 2254
28 Ga0070667_100024920 3300005367 Bacteria 4970
29 Ga0070714_100944354 3300005435 Bacteria 838
30 Ga0070710_10000522 3300005437 Bacteria 18074
31 Ga0070701_10004802 3300005438 Bacteria 5525
32 Ga0070700_100001852 3300005441 Bacteria 10666
33 Ga0070678_100001620 3300005456 Bacteria 12059
34 Ga0070706_100019737 3300005467 Bacteria 6217
35 Ga0070707_100856708 3300005468 Bacteria 873
36 Ga0070698_100022240 3300005471 Bacteria 6635
37 Ga0070684_100035280 3300005535 Bacteria 4281
38 Ga0068853_100056590 3300005539 Bacteria 3383
39 Ga0070672_100074518 3300005543 Bacteria 2707
40 Ga0070672_100076545 3300005543 Bacteria 2673
41 Ga0070693_100210371 3300005547 Bacteria 1269
42 Ga0068854_100055375 3300005578 Bacteria 2855
43 Ga0068852_100042176 3300005616 Bacteria 3861
44 Ga0068864_100464779 3300005618 Bacteria 1212
45 Ga0068861_100019920 3300005719 Bacteria 4796
46 Ga0068870_10038862 3300005840 Bacteria 2459
47 Ga0068870_10078631 3300005840 Bacteria 1817
48 Ga0081455_10000090 3300005937 Bacteria 97813
49 Ga0070717_10194230 3300006028 Bacteria 1775
50 Ga0075365_10011353 3300006038 Bacteria 5234
51 Ga0075365_10021177 3300006038 Bacteria 4051
52 Ga0075365_10099810 3300006038 Bacteria 1987
53 Ga0075368_10028236 3300006042 Bacteria 2167
54 Ga0075364_10031481 3300006051 Bacteria 3408
55 Ga0075364_10042279 3300006051 Bacteria 2960
56 Ga0075364_10391028 3300006051 Bacteria 949
57 Ga0075362_10020447 3300006177 Bacteria 2765
58 Ga0075367_10077583 3300006178 Bacteria 2006
59 Ga0075370_10001931 3300006353 Bacteria 9351
60 Ga0075429_101000646 3300006880 Bacteria 731
61 Ga0068865_100040373 3300006881 Bacteria 3170
62 Ga0105251_10098914 3300009011 Bacteria 1334
63 Ga0105244_10026687 3300009036 Bacteria 3122
64 Ga0105244_10103729 3300009036 Bacteria 1389
65 Ga0111539_11201738 3300009094 Bacteria 881
66 Ga0105245_10178434 3300009098 Bacteria 2027
67 Ga0105243_10010125 3300009148 Bacteria 7172
68 Ga0105243_10025355 3300009148 Bacteria 4530
69 Ga0105242_10041040 3300009176 Bacteria 3730
70 Ga0105242_10418254 3300009176 Bacteria 1255
71 Ga0105248_10121570 3300009177 Bacteria 2946
72 Ga0105248_10452195 3300009177 Bacteria 1447
73 Ga0105249_10033831 3300009553 Bacteria 4629
74 Ga0105246_10002536 3300011119 Bacteria 11040
75 Ga0105246_10009806 3300011119 Bacteria 5906
76 Ga0105246_10032075 3300011119 Bacteria 3481
77 Ga0105246_10085941 3300011119 Bacteria 2254
78 Ga0105246_10318500 3300011119 Bacteria 1263
79 Ga0105246_10602258 3300011119 Bacteria 950
80 Ga0157370_10033545 3300013104 Bacteria 5005
81 Ga0157369_10081968 3300013105 Bacteria 3452
82 Ga0157369_10119787 3300013105 Bacteria 2793
83 Ga0157369_10180779 3300013105 Bacteria 2219
84 Ga0157369_10184452 3300013105 Bacteria 2194
85 Ga0163162_10444152 3300013306 Bacteria 1429
86 Ga0157372_10085961 3300013307 Bacteria 3568
87 Ga0157372_11115857 3300013307 Bacteria 912
88 Ga0157375_10189754 3300013308 Bacteria 2210
89 Ga0163163_10082506 3300014325 Bacteria 3219
90 Ga0157380_10105824 3300014326 Bacteria 2353
91 Ga0157380_10904762 3300014326 Bacteria 909
92 Ga0157377_10089516 3300014745 Bacteria 1814
93 Ga0163161_10053564 3300017792 Bacteria 2926
94 Ga0224712_10029213 3300022467 Bacteria 1978
95 Ga0207425_1011446 3300025245 Bacteria 2114
96 Ga0209148_1008149 3300025254 Bacteria 2122
97 Ga0209129_1000060 3300025258 Bacteria 248262
98 Ga0209025_1000308 3300025294 Bacteria 108660
99 Ga0209051_1004493 3300025303 Bacteria 8570
100 Ga0209051_1020331 3300025303 Bacteria 2862
101 Ga0207697_10003498 3300025315 Bacteria 7749
102 Ga0207697_10004986 3300025315 Bacteria 6254
103 Ga0207655_1007172 3300025728 Bacteria 7268
104 Ga0207713_1024269 3300025735 Bacteria 2831
105 Ga0207682_10010883 3300025893 Bacteria 3560
106 Ga0207692_10175358 3300025898 Bacteria 1245
107 Ga0207688_10006366 3300025901 Bacteria 6430
108 Ga0207688_10057228 3300025901 Bacteria 2191
109 Ga0207645_10028711 3300025907 Bacteria 3590
110 Ga0207643_10001162 3300025908 Bacteria 15647
111 Ga0207684_10208998 3300025910 Bacteria 1684
112 Ga0207662_10041251 3300025918 Bacteria 2717
113 Ga0207657_10275043 3300025919 Bacteria 1338
114 Ga0207681_10011992 3300025923 Bacteria 5337
115 Ga0207650_10021317 3300025925 Bacteria 4579
116 Ga0207650_10556132 3300025925 Bacteria 962
117 Ga0207659_10019310 3300025926 Bacteria 4484
118 Ga0207659_10096603 3300025926 Bacteria 2218
119 Ga0207687_10072886 3300025927 Bacteria 2458
120 Ga0207664_10816639 3300025929 Bacteria 839
121 Ga0207686_10301315 3300025934 Bacteria 1190
122 Ga0207709_10022711 3300025935 Bacteria 3562
123 Ga0207709_10028637 3300025935 Bacteria 3222
124 Ga0207709_10094670 3300025935 Bacteria 1961
125 Ga0207709_10644634 3300025935 Bacteria 843
126 Ga0207669_10082473 3300025937 Bacteria 2064
127 Ga0207691_10000686 3300025940 Bacteria 33446
128 Ga0207691_10008790 3300025940 Bacteria 9685
129 Ga0207711_10346910 3300025941 Bacteria 1374
130 Ga0207711_10608513 3300025941 Bacteria 1019
131 Ga0207689_10382801 3300025942 Bacteria 1171
132 Ga0207661_10119144 3300025944 Bacteria 2245
133 Ga0207651_10103270 3300025960 Bacteria 2121
134 Ga0207712_10017631 3300025961 Bacteria 4642
135 Ga0207640_10011869 3300025981 Bacteria 4946
136 Ga0207658_10020046 3300025986 Bacteria 4629
137 Ga0207677_10020844 3300026023 Bacteria 3992
138 Ga0207639_10147605 3300026041 Bacteria 1966
139 Ga0207708_10000075 3300026075 Bacteria 78540
140 Ga0207708_10781229 3300026075 Bacteria 821
141 Ga0207702_11025997 3300026078 Bacteria 818
142 Ga0207675_100014243 3300026118 Bacteria 7412
143 Ga0207683_10003552 3300026121 Bacteria 13597
144 Ga0207683_10063498 3300026121 Bacteria 3253
145 Ga0209813_10020800 3300027866 Bacteria 1840
146 Ga0207428_10376705 3300027907 Bacteria 1042
147 Ga0307515_10072870 3300028794 Bacteria 4627
148 Ga0307408_100009613 3300031548 Bacteria 6378
149 Ga0307408_100018249 3300031548 Bacteria 4709
150 Ga0307408_100019806 3300031548 Bacteria 4532
151 Ga0307408_100045069 3300031548 Bacteria 3148
152 Ga0307408_100100429 3300031548 Bacteria 2203
153 Ga0307408_100125685 3300031548 Bacteria 1994
154 Ga0307408_100190542 3300031548 Bacteria 1651
155 Ga0307408_100259079 3300031548 Bacteria 1438
156 Ga0307408_100501580 3300031548 Bacteria 1062
157 Ga0307408_100520577 3300031548 Bacteria 1044
158 Ga0307408_100748971 3300031548 Bacteria 882
159 Ga0307408_101102047 3300031548 Bacteria 736
160 Ga0307405_10009569 3300031731 Bacteria 4975
161 Ga0307405_10048920 3300031731 Bacteria 2610
162 Ga0307405_10057074 3300031731 Bacteria 2451
163 Ga0307405_10083642 3300031731 Bacteria 2093
164 Ga0307405_10089404 3300031731 Bacteria 2035
165 Ga0307405_10144017 3300031731 Bacteria 1666
166 Ga0307405_10202902 3300031731 Bacteria 1441
167 Ga0307405_10246128 3300031731 Bacteria 1327
168 Ga0307405_10337443 3300031731 Bacteria 1157
169 Ga0307405_10466184 3300031731 Bacteria 1005
170 Ga0307405_10642436 3300031731 Bacteria 871
171 Ga0307405_11141154 3300031731 Bacteria 671
172 Ga0307413_10020943 3300031824 Bacteria 3490
173 Ga0307413_10035489 3300031824 Bacteria 2861
174 Ga0307413_10036596 3300031824 Bacteria 2827
175 Ga0307413_10094673 3300031824 Bacteria 1956
176 Ga0307413_10108814 3300031824 Bacteria 1851
177 Ga0307413_10647146 3300031824 Bacteria 871
178 Ga0307413_10909196 3300031824 Bacteria 748
179 Ga0307518_10000077 3300031838 Bacteria 66737
180 Ga0307410_10004759 3300031852 Bacteria 7079
181 Ga0307410_10023784 3300031852 Bacteria 3817
182 Ga0307410_10040524 3300031852 Bacteria 3065
183 Ga0307410_10063993 3300031852 Bacteria 2525
184 Ga0307410_10066945 3300031852 Bacteria 2476
185 Ga0307410_10078925 3300031852 Bacteria 2305
186 Ga0307410_10102521 3300031852 Bacteria 2053
187 Ga0307410_10176491 3300031852 Bacteria 1614
188 Ga0307410_10248256 3300031852 Bacteria 1382
189 Ga0307410_10456759 3300031852 Bacteria 1043
190 Ga0307410_10465678 3300031852 Bacteria 1034
191 Ga0307410_10537914 3300031852 Bacteria 966
192 Ga0307406_10063913 3300031901 Bacteria 2386
193 Ga0307406_10131804 3300031901 Bacteria 1756
194 Ga0307406_10254476 3300031901 Bacteria 1325
195 Ga0307407_10100568 3300031903 Bacteria 1793
196 Ga0307407_10586205 3300031903 Bacteria 828
197 Ga0307407_10753507 3300031903 Bacteria 737
198 Ga0307412_10003067 3300031911 Bacteria 9262
199 Ga0307412_10010287 3300031911 Bacteria 5388
200 Ga0307412_10013129 3300031911 Bacteria 4846
201 Ga0307412_10034725 3300031911 Bacteria 3216
202 Ga0307412_10067158 3300031911 Bacteria 2434
203 Ga0307412_10109931 3300031911 Bacteria 1966
204 Ga0307412_10151126 3300031911 Bacteria 1713
205 Ga0307412_10156864 3300031911 Bacteria 1686
206 Ga0307412_10167038 3300031911 Bacteria 1641
207 Ga0307412_10219475 3300031911 Bacteria 1456
208 Ga0307412_10240842 3300031911 Bacteria 1399
209 Ga0307412_10414427 3300031911 Bacteria 1100
210 Ga0307412_10725466 3300031911 Bacteria 855
211 Ga0307409_100029658 3300031995 Bacteria 3918
212 Ga0307409_100050746 3300031995 Bacteria 3170
213 Ga0307409_100133140 3300031995 Bacteria 2128
214 Ga0307409_100167253 3300031995 Bacteria 1931
215 Ga0307409_100181680 3300031995 Bacteria 1863
216 Ga0307409_100266101 3300031995 Bacteria 1576
217 Ga0307409_100331386 3300031995 Bacteria 1428
218 Ga0307409_100526384 3300031995 Bacteria 1156
219 Ga0307409_101026253 3300031995 Bacteria 844
220 Ga0307409_101172216 3300031995 Bacteria 791
221 Ga0307416_100009768 3300032002 Bacteria 6305
222 Ga0307416_100016653 3300032002 Bacteria 5118
223 Ga0307416_100033771 3300032002 Bacteria 3883
224 Ga0307416_100065054 3300032002 Bacteria 2994
225 Ga0307416_100076980 3300032002 Bacteria 2799
226 Ga0307416_100079103 3300032002 Bacteria 2769
227 Ga0307416_100131258 3300032002 Bacteria 2255
228 Ga0307416_100419150 3300032002 Bacteria 1382
229 Ga0307416_100796937 3300032002 Bacteria 1040
230 Ga0307416_100996352 3300032002 Bacteria 941
231 Ga0307416_101322593 3300032002 Bacteria 826
232 Ga0307414_10074967 3300032004 Bacteria 2454
233 Ga0307414_10479157 3300032004 Bacteria 1097
234 Ga0307414_10890852 3300032004 Bacteria 815
235 Ga0307411_10193644 3300032005 Bacteria 1554
236 Ga0307411_10247509 3300032005 Bacteria 1400
237 Ga0307411_10393270 3300032005 Bacteria 1144
238 Ga0307411_10561753 3300032005 Bacteria 975
239 Ga0307415_100029582 3300032126 Bacteria 3503
240 Ga0307415_100218573 3300032126 Bacteria 1526
241 Ga0307415_100465306 3300032126 Bacteria 1097
242 Ga0307415_100501186 3300032126 Bacteria 1062
243 Ga0307415_100824823 3300032126 Bacteria 849
244 Ga0307507_10020436 3300033179 Bacteria 7414
245 Ga0307510_10054458 3300033180 Bacteria 4190
246 Ga0395899_0022947 3300037312 Bacteria 4728
247 Ga0395899_0027619 3300037312 Bacteria 4276
248 Ga0395899_0175840 3300037312 Bacteria 1505
249 Ga0395900_0030970 3300037418 Bacteria 5495
250 Ga0395900_0136297 3300037418 Bacteria 2515
251 Ga0395898_0004609 3300037466 Bacteria 15043
252 Ga0395898_0009287 3300037466 Bacteria 10341
253 Ga0395898_0085973 3300037466 Bacteria 3031
254 Ga0395898_0539385 3300037466 Bacteria 1108
255 Ga0395898_0645914 3300037466 Bacteria 1000
256 Ga0395905_0178971 3300037471 Bacteria 1991
257 Ga0436364_0329896 3300037853 Bacteria 1067
258 Ga0395901_0078433 3300038443 Bacteria 3448
259 Ga0395901_0322388 3300038443 Bacteria 1598
260 Ga0395901_0500256 3300038443 Bacteria 1237
261 Ga0439436_0013914 3300041404 Bacteria 2431
262 Ga0439436_0020938 3300041404 Bacteria 1946
263 Ga0439438_021845 3300041405 Bacteria 1781
264 Ga0439438_022422 3300041405 Bacteria 1751
265 Ga0439439_0014601 3300041406 Bacteria 1913
266 Ga0439439_0022880 3300041406 Bacteria 1564
267 Ga0439466_0003515 3300041411 Bacteria 6063
268 Ga0439466_0095725 3300041411 Bacteria 929
269 Ga0439465_0067988 3300041413 Bacteria 1190
270 Ga0451797_1403604 3300041453 Bacteria 2285
271 Ga0451845_0905563 3300041501 Bacteria 1261
272 Ga0439433_0001139 3300041999 Bacteria 5440
273 Ga0439433_0001811 3300041999 Bacteria 4448
274 Ga0439442_000182 3300042002 Bacteria 16022
275 Ga0439442_000298 3300042002 Bacteria 12007
276 Ga0439442_003106 3300042002 Bacteria 3288
277 Ga0439442_011736 3300042002 Bacteria 1786
278 Ga0439442_018058 3300042002 Bacteria 1457
279 Ga0439442_039038 3300042002 Bacteria 995
280 Ga0439432_074107 3300042006 Bacteria 1036
281 Ga0439449_0000963 3300042007 Bacteria 11301
282 Ga0439449_0014983 3300042007 Bacteria 2913
283 Ga0439449_0091886 3300042007 Bacteria 1120
284 Ga0439449_0247100 3300042007 Bacteria 670
285 Ga0439457_002643 3300042014 Bacteria 5060
286 Ga0439457_005523 3300042014 Bacteria 3175
287 Ga0439457_014454 3300042014 Bacteria 1767
288 Ga0439462_0018018 3300042015 Bacteria 1832
289 Ga0450919_002310 3300042121 Bacteria 2470
290 Ga0450919_016756 3300042121 Bacteria 827
291 Ga0450920_005790 3300042122 Bacteria 2206
292 Ga0450920_018676 3300042122 Bacteria 1328
293 Ga0450920_018831 3300042122 Bacteria 1323
294 Ga0439446_0100948 3300042156 Bacteria 913
295 Ga0450908_017683 3300042184 Bacteria 1264
296 Ga0439434_0007667 3300042435 Bacteria 3162
297 Ga0439434_0045886 3300042435 Bacteria 1348
298 Ga0450918_004618 3300042531 Bacteria 2501
299 Ga0466966_0150516 3300044684 Bacteria 1419
300 Ga0466961_0020373 3300044693 Bacteria 4265
301 Ga0466963_0509995 3300044694 Bacteria 849
302 Ga0466957_0080099 3300044842 Bacteria 2033
303 Ga0466960_0018993 3300044901 Bacteria 3021
304 Ga0466960_0269662 3300044901 Bacteria 951
305 Ga0466959_0279316 3300045049 Bacteria 1146
306 Ga0466958_0037994 3300045836 Bacteria 2887
307 Ga0466958_0079653 3300045836 Bacteria 2014
308 Ga0466958_0422300 3300045836 Bacteria 862
309 Ga0466958_0627715 3300045836 Bacteria 699
310 Ga0466967_0003810 3300045976 Bacteria 9972
311 Ga0466967_0881977 3300045976 Bacteria 889
312 Ga0495590_0000162 3300046457 Bacteria 39932
313 Ga0495629_0032889 3300046459 Bacteria 3670
314 Ga0495653_0017629 3300046463 Bacteria 5806
315 Ga0495580_0014340 3300046472 Bacteria 6012
316 Ga0495582_0043562 3300046473 Bacteria 2472
317 Ga0495582_0097598 3300046473 Bacteria 1643
318 Ga0495662_0008132 3300046476 Bacteria 5168
319 Ga0495664_0061467 3300046477 Bacteria 2236
320 Ga0495594_0036084 3300046499 Bacteria 2695
321 Ga0495630_0143145 3300046517 Bacteria 1818
322 Ga0495631_0241942 3300046518 Bacteria 769
323 Ga0495643_0124126 3300046522 Bacteria 1302
324 Ga0495643_0238976 3300046522 Bacteria 853
325 Ga0495642_0031763 3300046528 Bacteria 2118
326 Ga0495642_0049328 3300046528 Bacteria 1729
327 Ga0495665_0004892 3300046531 Bacteria 7221
328 Ga0495665_0010323 3300046531 Bacteria 5053
329 Ga0495586_0001926 3300046535 Bacteria 11310
330 Ga0495586_0192106 3300046535 Bacteria 1156
331 Ga0495587_0123439 3300046536 Bacteria 1482
332 Ga0495645_0004660 3300046543 Bacteria 9358
333 Ga0495622_0318694 3300046557 Bacteria 676
334 Ga0495633_0333396 3300046558 Bacteria 688
335 Ga0495667_0021560 3300046559 Bacteria 4347
336 Ga0495656_0119355 3300046615 Bacteria 1243
337 Ga0495635_0066741 3300046663 Bacteria 2468
338 Ga0495661_0104025 3300046665 Bacteria 1593
339 Ga0495588_0026751 3300046674 Bacteria 2881
340 Ga0495588_0127711 3300046674 Bacteria 1341
341 Ga0495588_0134544 3300046674 Bacteria 1304
342 Ga0495657_0115480 3300046675 Bacteria 1696
343 Ga0495599_0458221 3300046678 Bacteria 754
344 Ga0495613_0318506 3300046689 Bacteria 1074
345 Ga0495670_0002427 3300046691 Bacteria 9205
346 Ga0495670_0148282 3300046691 Bacteria 1229
347 Ga0495600_0056287 3300046809 Bacteria 2569
348 Ga0495581_0002533 3300047315 Bacteria 10375
349 Ga0495581_0100287 3300047315 Bacteria 1682
350 Ga0495581_0213117 3300047315 Bacteria 1129
351 Ga0495604_0109520 3300047317 Bacteria 2016
352 Ga0495636_0008024 3300047318 Bacteria 4163
353 Ga0495672_0039844 3300047320 Bacteria 2854
354 Ga0495680_0051466 3300047322 Bacteria 3215
355 Ga0495675_0024539 3300047444 Bacteria 3844
356 Ga0495681_0045570 3300047470 Bacteria 2098
357 Ga0495593_0028055 3300047673 Bacteria 3094
358 Ga0496100_0057568 3300048903 Bacteria 2546
359 Ga0496101_0007447 3300048904 Bacteria 7093
360 Ga0496102_0351493 3300048905 Bacteria 1388
361 Ga0496102_0395034 3300048905 Bacteria 1300
362 Ga0496102_0805613 3300048905 Bacteria 861
363 Ga0496103_0016675 3300048906 Bacteria 4386
364 Ga0496103_0017171 3300048906 Bacteria 4327
365 Ga0496103_0041597 3300048906 Bacteria 2825
366 Ga0496105_0018427 3300048908 Bacteria 5610
367 Ga0496106_0047699 3300048909 Bacteria 3224
368 Ga0496106_0173970 3300048909 Bacteria 1707
369 Ga0496107_0173669 3300048910 Bacteria 1599
370 Ga0496108_0066419 3300048911 Bacteria 3041
371 Ga0496108_0082215 3300048911 Bacteria 2730
372 Ga0496109_0157844 3300048912 Bacteria 2125
373 Ga0496109_0286576 3300048912 Bacteria 1552
374 Ga0496110_0022151 3300048913 Bacteria 5391
375 Ga0496110_0069253 3300048913 Bacteria 3124
376 Ga0496111_0020778 3300048914 Bacteria 4576
377 Ga0496111_0287393 3300048914 Bacteria 1219
378 Ga0496111_0409582 3300048914 Bacteria 1002
379 Ga0496112_0029515 3300048915 Bacteria 5304
380 Ga0496112_0207015 3300048915 Bacteria 1919
381 Ga0496113_0028684 3300048916 Bacteria 4006
382 Ga0496114_0054166 3300048917 Bacteria 3345
383 Ga0496114_0218180 3300048917 Bacteria 1674
384 Ga0496114_0225297 3300048917 Bacteria 1646
385 Ga0496115_0436374 3300048918 Bacteria 1059
386 Ga0496120_0277719 3300048923 Bacteria 776
387 Ga0496121_0319520 3300048924 Bacteria 1046
388 Ga0496122_0011187 3300048925 Bacteria 9131
389 Ga0496123_0005519 3300048926 Bacteria 12698
390 Ga0496124_0177338 3300048927 Bacteria 1643
391 Ga0501032_0019260 3300049569 Bacteria 4775
392 Ga0501032_0060902 3300049569 Bacteria 2531
393 Ga0501034_0000042 3300049571 Bacteria 229124
394 Ga0501034_0012846 3300049571 Bacteria 8637
395 Ga0501037_0012517 3300049573 Bacteria 6248
396 Ga0501037_0013015 3300049573 Bacteria 6133
397 Ga0501038_0025990 3300049574 Bacteria 5215
398 Ga0501038_0030761 3300049574 Bacteria 4746
399 Ga0501038_0120390 3300049574 Bacteria 2165
400 Ga0501038_0203219 3300049574 Bacteria 1589
401 Ga0501039_0017942 3300049575 Bacteria 5427
402 Ga0501043_0164174 3300049579 Bacteria 1734
403 Ga0501043_0280481 3300049579 Bacteria 1277
404 Ga0501043_0467737 3300049579 Bacteria 945
405 Ga0501046_0130220 3300049580 Bacteria 1909
406 Ga0501067_0056948 3300049583 Bacteria 2165
407 Ga0501070_0003400 3300049586 Bacteria 13815
408 Ga0501070_0037353 3300049586 Bacteria 4055
409 Ga0501070_0124382 3300049586 Bacteria 2132
410 Ga0501071_0008372 3300049587 Bacteria 6834
411 Ga0501073_0044693 3300049589 Bacteria 3122
412 Ga0501073_0713955 3300049589 Bacteria 692
413 Ga0501075_0089516 3300049591 Bacteria 2334
414 Ga0501076_0086387 3300049592 Bacteria 2521
415 Ga0501077_0069020 3300049593 Bacteria 2240
416 Ga0501079_0009046 3300049741 Bacteria 7545
417 Ga0501080_0139687 3300049742 Bacteria 2240
418 Ga0501279_003745 3300049775 Bacteria 1989
419 Ga0501045_0194826 3300049824 Bacteria 1510
420 nmdc:mga03683_362103_c1 3300050489 Bacteria 688
421 nmdc:mga03n38_80032_c1 3300050490 Bacteria 1534
422 nmdc:mga00v17_155863_c1 3300050491 Bacteria 1469
423 nmdc:mga00v17_359315_c1 3300050491 Bacteria 947
424 nmdc:mga00v17_431724_c1 3300050491 Bacteria 856
425 nmdc:mga06z11_174064_c1 3300050494 Bacteria 1238
426 nmdc:mga04h51_41756_c1 3300050495 Bacteria 1501
427 nmdc:mga07m45_25640_c1 3300050496 Bacteria 3235
428 nmdc:mga07m45_78890_c1 3300050496 Bacteria 1879
429 nmdc:mga08y16_814598_c1 3300050511 Bacteria 926
430 Ga0495655_0108490 3300053083 Bacteria 831
431 Ga0500643_001028 3300053087 Bacteria 16963
432 Ga0500559_0001811 3300053136 Bacteria 11685
433 Ga0500616_0000010 3300053153 Bacteria 761410
434 Ga0501084_0080662 3300054114 Bacteria 2728
435 Ga0587106_007969 3300059605 Bacteria 1302
436 Ga0587072_002695 3300059643 Bacteria 2407
437 Ga0587079_046572 3300059647 Bacteria 895
438 Ga0501082_0291150 3300060353 Bacteria 1422
439 Ga0466962_0096019 3300061719 Bacteria 1421
440 Ga0466962_0303283 3300061719 Bacteria 790
441 2537899235 2537561592 Bacteria 4348607
442 2555228929 2554235227 Bacteria 3637389
443 2586063547 2585427649 Bacteria 9053857
444 2655033411 2654587600 Bacteria 3911798
445 2691515164 2690315906 Bacteria 4517044
446 2739603338 2739367653 Bacteria 2780952
447 2775655625 2775506735 Bacteria 4556596
448 2795783153 2795385470 Bacteria 8317180
449 2808828359 2808606357 Bacteria 4466944
450 2808849603 2808606360 Bacteria 4404006
451 2808877806 2808606366 Bacteria 4415912
452 2808892576 2808606370 Bacteria 4942454
453 2808895327 2808606371 Bacteria 4251511
454 2809587303 2808606522 Bacteria 9488490
455 2810362861 2808606700 Bacteria 3482157
456 2812319922 2811994871 Bacteria 4497550
457 2844850010 2844849076 Bacteria 4091819
458 2857727397 2857727296 Bacteria 2745552
459 2857742355 2857740372 Bacteria 4782044
460 2868090306 2868088558 Bacteria 7609351
461 2884701442 2884693830 Bacteria 11273186
462 2895442666 2895442618 Bacteria 11027144
463 2897563507 2897561785 Bacteria 3256946
464 2899375697 2899370129 Bacteria 6781179
465 2904500608 2904497146 Bacteria 4731781
466 2904777157 2904776348 Bacteria 4658726
467 2910814424 2910809715 Bacteria 4982797
468 2915774964 2915768154 Bacteria 8424322
469 2917743551 2917736166 Bacteria 9690793
470 2919038214 2919034639 Bacteria 4763403
471 2919053529 2919051321 Bacteria 4210889
472 2919059255 2919059106 Bacteria 4991624
473 2919541144 2919538618 Bacteria 4677069
474 2920881376 2920879853 Bacteria 4216831
475 2931403398 2931396565 Bacteria 7251677
476 2932427292 2932426870 Bacteria 4547726
477 2933420948 2933418574 Bacteria 4476724
478 2939599206 2939598168 Bacteria 4687164
479 2939650489 2939647034 Bacteria 4681660
480 2939676857 2939674588 Bacteria 4844420
481 2945917673 2945916053 Bacteria 4555517
482 2945941806 2945941187 Bacteria 4682474
483 2945960510 2945956166 Bacteria 5110334
484 2946005806 2946003308 Bacteria 3857229
485 2946034092 2946033335 Bacteria 3835514
486 2946037715 2946037020 Bacteria 4900426
487 2946061490 2946059875 Bacteria 4386623
488 2953998979 2953998280 Bacteria 4812144
489 2974305740 2974302888 Bacteria 4369871
490 8003323410 8003314358 Bacteria 10575343
491 8004023909 8004021418 Bacteria 4313954
492 8004025641 8004025490 Bacteria 4327753
493 8054110869 8054107350 Bacteria 5022511
494 8057346272 8057345674 Bacteria 4160394
495 Ga0307416_100264393
496 LJQas_1000765
497 LJQas_1001400
498 rootL2_10182011
499 rootL2_10313541
500 Ga0055542_1006246
501 JGI25405J52794_10008648
502 Ga0065712_10162004
503 Ga0070676_10094680
504 Ga0070670_100627225
505 Ga0070677_10003184
506 Ga0070666_10169708
507 Ga0070682_100082999
508 Ga0070660_100200382
509 Ga0070689_100405222
510 Ga0070691_10028813
511 Ga0070687_100017952
512 Ga0070692_10003361
513 Ga0070668_100051202
514 Ga0070669_100003031
515 Ga0070675_100036794
516 Ga0070675_100132186
517 Ga0070671_100097287
518 Ga0070671_100968705
519 Ga0070674_100020050
520 Ga0070674_100407150
521 Ga0070673_100113159
522 Ga0070667_100024920
523 Ga0070714_100944354
524 Ga0070710_10000522
525 Ga0070701_10004802
526 Ga0070700_100001852
527 Ga0070678_100001620
528 Ga0070706_100019737
529 Ga0070707_100856708
530 Ga0070698_100022240
531 Ga0070684_100035280
532 Ga0068853_100056590
533 Ga0070672_100074518
534 Ga0070672_100076545
535 Ga0070693_100210371
536 Ga0068854_100055375
537 Ga0068852_100042176
538 Ga0068864_100464779
539 Ga0068861_100019920
540 Ga0068870_10038862
541 Ga0068870_10078631
542 Ga0081455_10000090
543 Ga0070717_10194230
544 Ga0075365_10011353
545 Ga0075365_10021177
546 Ga0075365_10099810
547 Ga0075368_10028236
548 Ga0075364_10031481
549 Ga0075364_10042279
550 Ga0075364_10391028
551 Ga0075362_10020447
552 Ga0075367_10077583
553 Ga0075370_10001931
554 Ga0075429_101000646
555 Ga0068865_100040373
556 Ga0105251_10098914
557 Ga0105244_10026687
558 Ga0105244_10103729
559 Ga0111539_11201738
560 Ga0105245_10178434
561 Ga0105243_10010125
562 Ga0105243_10025355
563 Ga0105242_10041040
564 Ga0105242_10418254
565 Ga0105248_10121570
566 Ga0105248_10452195
567 Ga0105249_10033831
568 Ga0105246_10002536
569 Ga0105246_10009806
570 Ga0105246_10032075
571 Ga0105246_10085941
572 Ga0105246_10318500
573 Ga0105246_10602258
574 Ga0157370_10033545
575 Ga0157369_10081968
576 Ga0157369_10119787
577 Ga0157369_10180779
578 Ga0157369_10184452
579 Ga0163162_10444152
580 Ga0157372_10085961
581 Ga0157372_11115857
582 Ga0157375_10189754
583 Ga0163163_10082506
584 Ga0157380_10105824
585 Ga0157380_10904762
586 Ga0157377_10089516
587 Ga0163161_10053564
588 Ga0224712_10029213
589 Ga0207425_1011446
590 Ga0209148_1008149
591 Ga0209129_1000060
592 Ga0209025_1000308
593 Ga0209051_1004493
594 Ga0209051_1020331
595 Ga0207697_10003498
596 Ga0207697_10004986
597 Ga0207655_1007172
598 Ga0207713_1024269
599 Ga0207682_10010883
600 Ga0207692_10175358
601 Ga0207688_10006366
602 Ga0207688_10057228
603 Ga0207645_10028711
604 Ga0207643_10001162
605 Ga0207684_10208998
606 Ga0207662_10041251
607 Ga0207657_10275043
608 Ga0207681_10011992
609 Ga0207650_10021317
610 Ga0207650_10556132
611 Ga0207659_10019310
612 Ga0207659_10096603
613 Ga0207687_10072886
614 Ga0207664_10816639
615 Ga0207686_10301315
616 Ga0207709_10022711
617 Ga0207709_10028637
618 Ga0207709_10094670
619 Ga0207709_10644634
620 Ga0207669_10082473
621 Ga0207691_10000686
622 Ga0207691_10008790
623 Ga0207711_10346910
624 Ga0207711_10608513
625 Ga0207689_10382801
626 Ga0207661_10119144
627 Ga0207651_10103270
628 Ga0207712_10017631
629 Ga0207640_10011869
630 Ga0207658_10020046
631 Ga0207677_10020844
632 Ga0207639_10147605
633 Ga0207708_10000075
634 Ga0207708_10781229
635 Ga0207702_11025997
636 Ga0207675_100014243
637 Ga0207683_10003552
638 Ga0207683_10063498
639 Ga0209813_10020800
640 Ga0207428_10376705
641 Ga0307515_10072870
642 Ga0307408_100009613
643 Ga0307408_100018249
644 Ga0307408_100019806
645 Ga0307408_100045069
646 Ga0307408_100100429
647 Ga0307408_100125685
648 Ga0307408_100190542
649 Ga0307408_100259079
650 Ga0307408_100501580
651 Ga0307408_100520577
652 Ga0307408_100748971
653 Ga0307408_101102047
654 Ga0307405_10009569
655 Ga0307405_10048920
656 Ga0307405_10057074
657 Ga0307405_10083642
658 Ga0307405_10089404
659 Ga0307405_10144017
660 Ga0307405_10202902
661 Ga0307405_10246128
662 Ga0307405_10337443
663 Ga0307405_10466184
664 Ga0307405_10642436
665 Ga0307405_11141154
666 Ga0307413_10020943
667 Ga0307413_10035489
668 Ga0307413_10036596
669 Ga0307413_10094673
670 Ga0307413_10108814
671 Ga0307413_10647146
672 Ga0307413_10909196
673 Ga0307518_10000077
674 Ga0307410_10004759
675 Ga0307410_10023784
676 Ga0307410_10040524
677 Ga0307410_10063993
678 Ga0307410_10066945
679 Ga0307410_10078925
680 Ga0307410_10102521
681 Ga0307410_10176491
682 Ga0307410_10248256
683 Ga0307410_10456759
684 Ga0307410_10465678
685 Ga0307410_10537914
686 Ga0307406_10063913
687 Ga0307406_10131804
688 Ga0307406_10254476
689 Ga0307407_10100568
690 Ga0307407_10586205
691 Ga0307407_10753507
692 Ga0307412_10003067
693 Ga0307412_10010287
694 Ga0307412_10013129
695 Ga0307412_10034725
696 Ga0307412_10067158
697 Ga0307412_10109931
698 Ga0307412_10151126
699 Ga0307412_10156864
700 Ga0307412_10167038
701 Ga0307412_10219475
702 Ga0307412_10240842
703 Ga0307412_10414427
704 Ga0307412_10725466
705 Ga0307409_100029658
706 Ga0307409_100050746
707 Ga0307409_100133140
708 Ga0307409_100167253
709 Ga0307409_100181680
710 Ga0307409_100266101
711 Ga0307409_100331386
712 Ga0307409_100526384
713 Ga0307409_101026253
714 Ga0307409_101172216
715 Ga0307416_100009768
716 Ga0307416_100016653
717 Ga0307416_100033771
718 Ga0307416_100065054
719 Ga0307416_100076980
720 Ga0307416_100079103
721 Ga0307416_100131258
722 Ga0307416_100419150
723 Ga0307416_100796937
724 Ga0307416_100996352
725 Ga0307416_101322593
726 Ga0307414_10074967
727 Ga0307414_10479157
728 Ga0307414_10890852
729 Ga0307411_10193644
730 Ga0307411_10247509
731 Ga0307411_10393270
732 Ga0307411_10561753
733 Ga0307415_100029582
734 Ga0307415_100218573
735 Ga0307415_100465306
736 Ga0307415_100501186
737 Ga0307415_100824823
738 Ga0307507_10020436
739 Ga0307510_10054458
740 Ga0395899_0022947
741 Ga0395899_0027619
742 Ga0395899_0175840
743 Ga0395900_0030970
744 Ga0395900_0136297
745 Ga0395898_0004609
746 Ga0395898_0009287
747 Ga0395898_0085973
748 Ga0395898_0539385
749 Ga0395898_0645914
750 Ga0395905_0178971
751 Ga0436364_0329896
752 Ga0395901_0078433
753 Ga0395901_0322388
754 Ga0395901_0500256
755 Ga0439436_0013914
756 Ga0439436_0020938
757 Ga0439438_021845
758 Ga0439438_022422
759 Ga0439439_0014601
760 Ga0439439_0022880
761 Ga0439466_0003515
762 Ga0439466_0095725
763 Ga0439465_0067988
764 Ga0451797_1403604
765 Ga0451845_0905563
766 Ga0439433_0001139
767 Ga0439433_0001811
768 Ga0439442_000182
769 Ga0439442_000298
770 Ga0439442_003106
771 Ga0439442_011736
772 Ga0439442_018058
773 Ga0439442_039038
774 Ga0439432_074107
775 Ga0439449_0000963
776 Ga0439449_0014983
777 Ga0439449_0091886
778 Ga0439449_0247100
779 Ga0439457_002643
780 Ga0439457_005523
781 Ga0439457_014454
782 Ga0439462_0018018
783 Ga0450919_002310
784 Ga0450919_016756
785 Ga0450920_005790
786 Ga0450920_018676
787 Ga0450920_018831
788 Ga0439446_0100948
789 Ga0450908_017683
790 Ga0439434_0007667
791 Ga0439434_0045886
792 Ga0450918_004618
793 Ga0466966_0150516
794 Ga0466961_0020373
795 Ga0466963_0509995
796 Ga0466957_0080099
797 Ga0466960_0018993
798 Ga0466960_0269662
799 Ga0466959_0279316
800 Ga0466958_0037994
801 Ga0466958_0079653
802 Ga0466958_0422300
803 Ga0466958_0627715
804 Ga0466967_0003810
805 Ga0466967_0881977
806 Ga0495590_0000162
807 Ga0495629_0032889
808 Ga0495653_0017629
809 Ga0495580_0014340
810 Ga0495582_0043562
811 Ga0495582_0097598
812 Ga0495662_0008132
813 Ga0495664_0061467
814 Ga0495594_0036084
815 Ga0495630_0143145
816 Ga0495631_0241942
817 Ga0495643_0124126
818 Ga0495643_0238976
819 Ga0495642_0031763
820 Ga0495642_0049328
821 Ga0495665_0004892
822 Ga0495665_0010323
823 Ga0495586_0001926
824 Ga0495586_0192106
825 Ga0495587_0123439
826 Ga0495645_0004660
827 Ga0495622_0318694
828 Ga0495633_0333396
829 Ga0495667_0021560
830 Ga0495656_0119355
831 Ga0495635_0066741
832 Ga0495661_0104025
833 Ga0495588_0026751
834 Ga0495588_0127711
835 Ga0495588_0134544
836 Ga0495657_0115480
837 Ga0495599_0458221
838 Ga0495613_0318506
839 Ga0495670_0002427
840 Ga0495670_0148282
841 Ga0495600_0056287
842 Ga0495581_0002533
843 Ga0495581_0100287
844 Ga0495581_0213117
845 Ga0495604_0109520
846 Ga0495636_0008024
847 Ga0495672_0039844
848 Ga0495680_0051466
849 Ga0495675_0024539
850 Ga0495681_0045570
851 Ga0495593_0028055
852 Ga0496100_0057568
853 Ga0496101_0007447
854 Ga0496102_0351493
855 Ga0496102_0395034
856 Ga0496102_0805613
857 Ga0496103_0016675
858 Ga0496103_0017171
859 Ga0496103_0041597
860 Ga0496105_0018427
861 Ga0496106_0047699
862 Ga0496106_0173970
863 Ga0496107_0173669
864 Ga0496108_0066419
865 Ga0496108_0082215
866 Ga0496109_0157844
867 Ga0496109_0286576
868 Ga0496110_0022151
869 Ga0496110_0069253
870 Ga0496111_0020778
871 Ga0496111_0287393
872 Ga0496111_0409582
873 Ga0496112_0029515
874 Ga0496112_0207015
875 Ga0496113_0028684
876 Ga0496114_0054166
877 Ga0496114_0218180
878 Ga0496114_0225297
879 Ga0496115_0436374
880 Ga0496120_0277719
881 Ga0496121_0319520
882 Ga0496122_0011187
883 Ga0496123_0005519
884 Ga0496124_0177338
885 Ga0501032_0019260
886 Ga0501032_0060902
887 Ga0501034_0000042
888 Ga0501034_0012846
889 Ga0501037_0012517
890 Ga0501037_0013015
891 Ga0501038_0025990
892 Ga0501038_0030761
893 Ga0501038_0120390
894 Ga0501038_0203219
895 Ga0501039_0017942
896 Ga0501043_0164174
897 Ga0501043_0280481
898 Ga0501043_0467737
899 Ga0501046_0130220
900 Ga0501067_0056948
901 Ga0501070_0003400
902 Ga0501070_0037353
903 Ga0501070_0124382
904 Ga0501071_0008372
905 Ga0501073_0044693
906 Ga0501073_0713955
907 Ga0501075_0089516
908 Ga0501076_0086387
909 Ga0501077_0069020
910 Ga0501079_0009046
911 Ga0501080_0139687
912 Ga0501279_003745
913 Ga0501045_0194826
914 nmdc:mga03683_362103_c1
915 nmdc:mga03n38_80032_c1
916 nmdc:mga00v17_155863_c1
917 nmdc:mga00v17_359315_c1
918 nmdc:mga00v17_431724_c1
919 nmdc:mga06z11_174064_c1
920 nmdc:mga04h51_41756_c1
921 nmdc:mga07m45_25640_c1
922 nmdc:mga07m45_78890_c1
923 nmdc:mga08y16_814598_c1
924 Ga0495655_0108490
925 Ga0500643_001028
926 Ga0500559_0001811
927 Ga0500616_0000010
928 Ga0501084_0080662
929 Ga0587106_007969
930 Ga0587072_002695
931 Ga0587079_046572
932 Ga0501082_0291150
933 Ga0466962_0096019
934 Ga0466962_0303283
935 2537899235
936 2555228929
937 2586063547
938 2655033411
939 2691515164
940 2739603338
941 2775655625
942 2795783153
943 2808828359
944 2808849603
945 2808877806
946 2808892576
947 2808895327
948 2809587303
949 2810362861
950 2812319922
951 2844850010
952 2857727397
953 2857742355
954 2868090306
955 2884701442
956 2895442666
957 2897563507
958 2899375697
959 2904500608
960 2904777157
961 2910814424
962 2915774964
963 2917743551
964 2919038214
965 2919053529
966 2919059255
967 2919541144
968 2920881376
969 2931403398
970 2932427292
971 2933420948
972 2939599206
973 2939650489
974 2939676857
975 2945917673
976 2945941806
977 2945960510
978 2946005806
979 2946034092
980 2946037715
981 2946061490
982 2953998979
983 2974305740
984 8003323410
985 8004023909
986 8004025641
987 8054110869
988 8057346272

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17932

TetR_C_24

Tetracyclin repressor-like, C-terminal domain

116

228

0.96

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

51

97

0.95

PF21597

TetR_C_43

Transcriptional regulator SbtR-like, C-terminal domain

117

230

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2iai-assembly1.cif.gz_A-2 crystal structure of sco3833, a member of the tetr transcriptional regulator family from streptomyces coelicolor a3 0.9174 20 169
2ibd-assembly1.cif.gz_B crystal structure of probable transcriptional regulatory protein rha5900 0.8478 16 167
4uds-assembly1.cif.gz_A-2 crystal structure of mbdr regulator from azoarcus sp. cib 0.8311 16 176
5dy1-assembly1.cif.gz_B crystal of selenomethionine substituted amtr from corynebacterium glutamicum 0.8192 16 169
3vpr-assembly2.cif.gz_C crystal structure of a tetr family transcriptional regulator pfmr from thermus thermophilus hb8 0.8022 20 168
ID Description Score Start End Superfamily
2ibdB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9714 16 55 1.10.10.60
5k7fA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9324 16 56 1.10.10.60
2ibdB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9274 16 55 1.10.10.60
2ns8A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9266 20 65 1.10.10.60
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9167 17 62 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7Y5ZGX9-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9276 1 172 GO:0000976
GO:0003700
AF-A0A653ZHW0-F1-model_v4 TetR family transcriptional regulator 0.9044 1 169 GO:0000976
GO:0003700
AF-A0A2W4NB21-F1-model_v4 deleted 0.857 17 167
AF-A0A7W1LM35-F1-model_v4 TetR/AcrR family transcriptional regulator 0.8499 1 181 GO:0000976
GO:0003700
AF-A0A511D0K2-F1-model_v4 HTH tetR-type domain-containing protein 0.8496 41 205 GO:0000976
GO:0003700

Map