F454309

General Info

Members Datasets Scaffolds Average Seq Length
492 278 341 533

Family's Representative Sequence

Representative Sequence 3300044669|Ga0466981_0000025|Ga0466981_0000025_1345_3096
Length 583
Sequence LVACYFKLKWKLFLILEKMEIVLILLSENYPTIFRSHRGRDFGSLMRSRVMTQQATTVDELAFTQPYGEQEQQVLTAEAVEFLTELVTRFTPQRNKLLAARIHQQQEIDNGKLPGFISETASIRRGEWKIRGIPDDLQDRRVEITGPVERKMVINAMNANVKVFMADFEDSLAPDWRKVIEGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYKALLAKGSGPYFYLPKTQAWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMNEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQVVTMDKPFLSAYSRLLIKTCHKRGAFAMGGMAAFIPSKDAERNNQVLNKVKADKELEARNGHDGTWIAHPGLADTAMEVFNRVLGDNKNQLFVTREEDAPTAEEQLLAPCAGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKSLFRQMLAEEMRVIQDELGEHRFSSGRFDDAARLMEQITTSDDLIDFLTLPGYRFLA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
3 2506520008 Serratia plymuthica AS12 Isolate Unclassified
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
6 2547132181 Kosakonia sacchari SP1 Isolate Stem
7 2547132416 Enterobacter sp. MR1 Isolate Rhizoplane
8 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
9 2561511199 Enterobacter sp. R4-368 Isolate Nodule
10 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
11 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
12 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
13 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
14 2599185299 Pantoea ananatis NFR11 Isolate Rhizoplane
15 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
16 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
17 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
18 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
19 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
20 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
21 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
22 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
23 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
24 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
25 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
26 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
27 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
28 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
29 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
30 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
31 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
32 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
33 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
34 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
35 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
36 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
37 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
38 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
39 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
40 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
41 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
42 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
43 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
44 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
45 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
46 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
47 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
48 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
49 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
50 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
51 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
52 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
53 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
54 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
55 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
56 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
57 2608642108 Pantoea agglomerans NFPP29 Isolate Rhizoplane
58 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
59 2636415599 Klebsiella variicola DX120E Isolate Unclassified
60 2648501693 Pantoea ananatis B1-9 Isolate Rhizosphere
61 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
62 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
63 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
64 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
65 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
66 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
67 2681812869 Enterobacter ludwigii NFPP41 Isolate Rhizoplane
68 2684622997 Pantoea ananatis NFIX48 Isolate Rhizoplane
69 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
70 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
71 2706794495 Dickeya zeae ZJU1202 Isolate Unclassified
72 2711768156 Atlantibacter hermannii DDE1 Isolate Unclassified
73 2751185917 Enterobacter sp. HK169 Isolate Unclassified
74 2765235842 Enterobacter ludwigii AA4 Isolate Unclassified
75 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
76 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
77 2775507074 Klebsiella sp. D5A Isolate Unclassified
78 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
79 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
80 2791355275 Enterobacter sp. Sa187 Isolate Unclassified
81 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
82 2808606414 Pantoea sp. SJZ147 Isolate Rhizosphere
83 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
84 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
85 2821118458 Enterobacter asburiae 609 Isolate Unclassified
86 2823373977 Enterobacter ludwigii NCR3 Isolate Rhizosphere
87 2844425489 Enterobacter cloacae SBP-8 Isolate Rhizosphere
88 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
89 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
90 2847797336 Pantoea ananatis NN08200 Isolate Unclassified
91 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
92 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
93 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
94 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
95 2865014394 Pantoea sp. R-71966 Isolate Unclassified
96 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
97 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
98 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
99 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
100 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
101 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
102 2891670763 Buttiauxella sp. B2 Isolate Rhizosphere
103 2896429255 Sphingomonas rhizophila KACC 19189 Isolate Rhizosphere
104 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
105 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
106 2904504865 Serratia marcescens 1822 Isolate Unclassified
107 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
108 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
109 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
110 2919150387 Rahnella aceris 1817 Isolate Unclassified
111 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
112 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
113 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
114 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
115 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
116 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
117 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
118 2927143783 Rahnella sp. 2050 Isolate Unclassified
119 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
120 2932406140 Serratia sp. 2723 Isolate Rhizosphere
121 2935625433 Kosakonia sp. 1610 Isolate Rhizosphere
122 2937539931 Pantoea sp. LS15 Isolate Unclassified
123 2937967321 Serratia sp. YC16 Isolate Unclassified
124 2939568625 Lelliottia sp. 489 Isolate Rhizosphere
125 2939573065 Citrobacter sp. 506 Isolate Rhizosphere
126 2939577877 Serratia sp. 509 Isolate Rhizosphere
127 2939607340 Leclercia sp. 1548 Isolate Rhizosphere
128 2939617950 Kosakonia cowanii 2056 Isolate Rhizosphere
129 2939642701 Lelliottia nimipressuralis 2756 Isolate Rhizosphere
130 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
131 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
132 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
133 2974310843 Enterobacter sp. SORGH_AS 287 Isolate Unclassified
134 2974435778 Kosakonia cowanii SORGH_AS 304 Isolate Unclassified
135 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
136 2984494565 Pantoea ananatis SORGH_AS197 Isolate Aerial Root
137 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
138 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
139 2990261002 Pantoea ananatis SORGH_AS213 Isolate Aerial Root
140 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
141 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
142 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
143 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
144 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
145 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
146 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
147 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
148 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
149 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
150 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
151 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
152 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
153 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
154 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
155 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
156 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
157 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
158 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
159 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
160 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
161 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
162 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
163 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
164 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
165 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
166 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
167 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
168 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
169 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
170 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
171 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
172 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
173 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
174 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
175 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
176 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
177 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
178 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
179 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
180 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
181 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
182 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
183 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
184 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
185 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
186 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
187 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
188 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
189 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
190 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
191 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
192 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
193 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
194 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
195 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
196 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
197 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
198 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
199 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
200 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
201 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
202 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
203 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
204 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
205 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
206 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
207 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
208 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
209 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
210 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
211 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
212 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
213 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
214 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
215 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
216 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
217 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
218 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
219 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
220 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
221 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
222 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
223 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
224 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
225 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
226 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
227 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
228 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
229 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
230 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
231 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
232 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
233 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
234 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
235 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
236 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
237 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
238 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
239 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
240 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
241 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
242 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
243 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
244 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
245 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
246 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
247 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
248 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
249 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
250 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
251 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
252 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
253 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
254 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
255 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
256 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
257 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
258 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
259 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
260 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
261 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
262 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
263 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
264 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
265 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
266 640753048 Serratia proteamaculans 568 Isolate Endosphere
267 8004592986 Serratia sp. S119 Isolate Unclassified
268 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
269 8018221730 Enterobacter sp. CM29 Isolate Unclassified
270 8018405270 Enterobacter sp. 198 Isolate Rhizosphere
271 8019504834 Atlantibacter hermannii 1903 Isolate Rhizosphere
272 8054844752 Dryocola boscaweniae H18W14 Isolate Rhizosphere
273 8054849141 Dryocola clanedunensis H11S18 Isolate Rhizosphere
274 8055087960 Silvania hatchlandensis H19S6 Isolate Rhizosphere
275 8055092621 Silvania confinis H4N4 Isolate Rhizosphere
276 8055097453 Leclercia tamurae H6W5 Isolate Rhizosphere
277 8055693939 Hafnia alvei A23BA Isolate Rhizosphere
278 8057304971 Scandinavium manionii H17S15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.31
Metatranscriptomes 0
Isolates 30.69

Biome Distribution

Category Percentage (%)
Aerial Root 0.81
Bulb 0
Endosphere 5.08
Nodule 4.47
Rhizoplane 12.2
Rhizosphere 49.19
Stem 0.2
Stem Tuber 1.22
Unclassified 26.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1376966 2162886007 Bacteria 2220
2 JGI24739J22299_10000058 3300001989 Bacteria 31463
3 JGI25162J39368_1000031 3300002737 Bacteria 210480
4 JGI25163J39215_1000109 3300002771 Bacteria 34634
5 JGI25164J39214_1000050 3300002772 Bacteria 122934
6 JGI25152J39213_1001661 3300002773 Bacteria 9233
7 Ga0055538_1000004 3300003751 Bacteria 615646
8 Ga0055539_1000004 3300003752 Bacteria 615646
9 Ga0055533_1000007 3300003756 Bacteria 615646
10 Ga0055525_1000007 3300003759 Bacteria 615646
11 Ga0055541_1000004 3300003841 Bacteria 615646
12 Ga0058692_1000620 3300003856 Bacteria 14695
13 Ga0058692_1001552 3300003856 Bacteria 8334
14 Ga0058692_1004277 3300003856 Bacteria 4252
15 Ga0058692_1008154 3300003856 Bacteria 2715
16 Ga0058692_1008155 3300003856 Bacteria 2715
17 Ga0058692_1013638 3300003856 Bacteria 1884
18 Ga0065703_1018752 3300005272 Bacteria 17152
19 Ga0065704_10000303 3300005289 Bacteria 36020
20 Ga0065704_10003709 3300005289 Bacteria 4797
21 Ga0065704_10071761 3300005289 Bacteria 9987
22 Ga0068868_100000676 3300005338 Bacteria 22858
23 Ga0070660_100002958 3300005339 Bacteria 11684
24 Ga0070668_100012296 3300005347 Bacteria 6378
25 Ga0070675_100047333 3300005354 Bacteria 3524
26 Ga0070659_100000025 3300005366 Bacteria 144955
27 Ga0070707_100136221 3300005468 Bacteria 2389
28 Ga0070665_100003160 3300005548 Bacteria 17723
29 Ga0070665_100009403 3300005548 Bacteria 9893
30 Ga0070665_100020841 3300005548 Bacteria 6588
31 Ga0068857_100000017 3300005577 Bacteria 97445
32 Ga0075364_10029566 3300006051 Bacteria 3514
33 Ga0075366_10013218 3300006195 Bacteria 4697
34 Ga0079104_1000048 3300006946 Bacteria 178900
35 Ga0079104_1000107 3300006946 Bacteria 122549
36 Ga0079104_1001027 3300006946 Bacteria 21421
37 Ga0079104_1001148 3300006946 Bacteria 19193
38 Ga0079104_1001276 3300006946 Bacteria 17465
39 Ga0079104_1004197 3300006946 Bacteria 6268
40 Ga0079104_1007242 3300006946 Bacteria 4057
41 Ga0079104_1010643 3300006946 Bacteria 3012
42 Ga0079104_1011243 3300006946 Bacteria 2890
43 Ga0079104_1022700 3300006946 Bacteria 1683
44 Ga0079104_1022701 3300006946 Bacteria 1683
45 Ga0105251_10000177 3300009011 Bacteria 64178
46 Ga0105251_10000237 3300009011 Bacteria 55469
47 Ga0105251_10000643 3300009011 Bacteria 32099
48 Ga0105251_10000914 3300009011 Bacteria 26467
49 Ga0105251_10001528 3300009011 Bacteria 19850
50 Ga0105251_10002524 3300009011 Bacteria 14288
51 Ga0105251_10003337 3300009011 Bacteria 11704
52 Ga0105251_10012273 3300009011 Bacteria 4855
53 Ga0105251_10015351 3300009011 Bacteria 4192
54 Ga0105251_10017608 3300009011 Bacteria 3824
55 Ga0105251_10018330 3300009011 Bacteria 3725
56 Ga0105244_10000042 3300009036 Bacteria 150699
57 Ga0105244_10000075 3300009036 Bacteria 111242
58 Ga0105244_10000283 3300009036 Bacteria 50463
59 Ga0105244_10000434 3300009036 Bacteria 38618
60 Ga0105244_10003478 3300009036 Bacteria 11198
61 Ga0105244_10003912 3300009036 Bacteria 10472
62 Ga0105244_10006886 3300009036 Bacteria 7293
63 Ga0105244_10014380 3300009036 Bacteria 4579
64 Ga0105244_10070063 3300009036 Bacteria 1750
65 Ga0105250_10000084 3300009092 Bacteria 82520
66 Ga0105250_10000111 3300009092 Bacteria 72786
67 Ga0105250_10000161 3300009092 Bacteria 57855
68 Ga0105250_10006234 3300009092 Bacteria 5232
69 Ga0105250_10010047 3300009092 Bacteria 3960
70 Ga0105250_10010208 3300009092 Bacteria 3919
71 Ga0105250_10011994 3300009092 Bacteria 3588
72 Ga0105250_10033079 3300009092 Bacteria 2076
73 Ga0105247_10001307 3300009101 Bacteria 18283
74 Ga0105241_10000023 3300009174 Bacteria 141618
75 Ga0105246_10041215 3300011119 Bacteria 3120
76 Ga0157373_10028835 3300013100 Bacteria 4002
77 Ga0157371_10000381 3300013102 Bacteria 55715
78 Ga0157371_10005142 3300013102 Bacteria 11158
79 Ga0157370_10000888 3300013104 Bacteria 37968
80 Ga0157370_10015141 3300013104 Bacteria 7855
81 Ga0157370_10015696 3300013104 Bacteria 7692
82 Ga0157369_10004316 3300013105 Bacteria 16795
83 Ga0157369_10014763 3300013105 Bacteria 8812
84 Ga0163162_10047152 3300013306 Bacteria 4319
85 Ga0163162_10099443 3300013306 Bacteria 3000
86 Ga0157372_10001192 3300013307 Bacteria 28120
87 Ga0157372_10051881 3300013307 Bacteria 4565
88 Ga0157372_10139774 3300013307 Bacteria 2789
89 Ga0182008_10011465 3300014497 Bacteria 4714
90 Ga0182006_1000050 3300015261 Bacteria 183308
91 Ga0183366_1006 3300015679 Bacteria 136391
92 Ga0183370_1006 3300015680 Bacteria 136391
93 Ga0183369_1017 3300015685 Bacteria 136391
94 Ga0183368_1010 3300015687 Bacteria 136391
95 Ga0163161_10000049 3300017792 Bacteria 125501
96 Ga0163161_10024249 3300017792 Bacteria 4284
97 Ga0213876_10000402 3300021384 Bacteria 36433
98 Ga0209760_100081 3300025207 Bacteria 76994
99 Ga0209784_100001 3300025224 Bacteria 3600592
100 Ga0209566_100001 3300025225 Bacteria 3600765
101 Ga0209674_100002 3300025226 Bacteria 3600592
102 Ga0209563_100008 3300025230 Bacteria 1554545
103 Ga0207427_100002 3300025231 Bacteria 1355321
104 Ga0209437_100100 3300025233 Bacteria 228479
105 Ga0209437_100114 3300025233 Bacteria 210697
106 Ga0209677_100004 3300025253 Bacteria 1554545
107 Ga0209129_1000008 3300025258 Bacteria 640959
108 Ga0207696_1000014 3300025711 Bacteria 517939
109 Ga0207696_1000194 3300025711 Bacteria 93679
110 Ga0207696_1000197 3300025711 Bacteria 93006
111 Ga0207696_1000222 3300025711 Bacteria 82527
112 Ga0207696_1000441 3300025711 Bacteria 37095
113 Ga0207696_1001730 3300025711 Bacteria 11340
114 Ga0207696_1002732 3300025711 Bacteria 8409
115 Ga0207696_1005193 3300025711 Bacteria 5450
116 Ga0207655_1000025 3300025728 Bacteria 449261
117 Ga0207655_1000028 3300025728 Bacteria 437324
118 Ga0207655_1000055 3300025728 Bacteria 281598
119 Ga0207655_1000123 3300025728 Bacteria 154002
120 Ga0207655_1000136 3300025728 Bacteria 142167
121 Ga0207655_1000498 3300025728 Bacteria 50514
122 Ga0207655_1000519 3300025728 Bacteria 49053
123 Ga0207655_1002889 3300025728 Bacteria 13256
124 Ga0207655_1004066 3300025728 Bacteria 10535
125 Ga0207655_1008432 3300025728 Bacteria 6538
126 Ga0207655_1011637 3300025728 Bacteria 5216
127 Ga0207655_1016075 3300025728 Bacteria 4116
128 Ga0207655_1016425 3300025728 Bacteria 4048
129 Ga0207655_1032976 3300025728 Bacteria 2357
130 Ga0207713_1000007 3300025735 Bacteria 564979
131 Ga0207713_1000125 3300025735 Bacteria 120321
132 Ga0207713_1000152 3300025735 Bacteria 103609
133 Ga0207713_1000154 3300025735 Bacteria 103232
134 Ga0207713_1000289 3300025735 Bacteria 58339
135 Ga0207713_1001782 3300025735 Bacteria 16476
136 Ga0207713_1003193 3300025735 Bacteria 11333
137 Ga0207713_1004197 3300025735 Bacteria 9436
138 Ga0207713_1005318 3300025735 Bacteria 8088
139 Ga0207713_1006612 3300025735 Bacteria 7030
140 Ga0207713_1011264 3300025735 Bacteria 4877
141 Ga0207713_1011277 3300025735 Bacteria 4873
142 Ga0207713_1027938 3300025735 Bacteria 2552
143 Ga0207710_10000007 3300025900 Bacteria 488292
144 Ga0207654_10000026 3300025911 Bacteria 141628
145 Ga0207657_10001801 3300025919 Bacteria 23113
146 Ga0207681_10118912 3300025923 Bacteria 1935
147 Ga0207659_10009936 3300025926 Bacteria 5956
148 Ga0207690_10000005 3300025932 Bacteria 581199
149 Ga0207677_10000059 3300026023 Bacteria 94553
150 Ga0207674_10000179 3300026116 Bacteria 77729
151 Ga0209281_1000022 3300027111 Bacteria 522913
152 Ga0209281_1000096 3300027111 Bacteria 236276
153 Ga0209281_1000166 3300027111 Bacteria 156928
154 Ga0209281_1000220 3300027111 Bacteria 122558
155 Ga0209281_1000405 3300027111 Bacteria 65772
156 Ga0209281_1000493 3300027111 Bacteria 53628
157 Ga0209281_1001124 3300027111 Bacteria 19207
158 Ga0209281_1002487 3300027111 Bacteria 7303
159 Ga0209281_1005423 3300027111 Bacteria 3541
160 Ga0209281_1009298 3300027111 Bacteria 2315
161 Ga0209371_1000014 3300027312 Bacteria 661118
162 Ga0209371_1000115 3300027312 Bacteria 137627
163 Ga0209371_1000352 3300027312 Bacteria 50186
164 Ga0209371_1000784 3300027312 Bacteria 26276
165 Ga0209371_1000856 3300027312 Bacteria 24640
166 Ga0209371_1001337 3300027312 Bacteria 17138
167 Ga0209371_1006511 3300027312 Bacteria 4308
168 Ga0209371_1006903 3300027312 Bacteria 4089
169 Ga0209371_1010840 3300027312 Bacteria 2763
170 Ga0268266_10000179 3300028379 Bacteria 112622
171 Ga0268266_10041523 3300028379 Bacteria 3925
172 Ga0268256_1000012 3300030500 Bacteria 794553
173 Ga0268256_1000097 3300030500 Bacteria 137685
174 Ga0268256_1000120 3300030500 Bacteria 113671
175 Ga0268256_1000295 3300030500 Bacteria 50186
176 Ga0268256_1000659 3300030500 Bacteria 26276
177 Ga0268256_1001148 3300030500 Bacteria 17100
178 Ga0268256_1006550 3300030500 Bacteria 4308
179 Ga0268256_1010909 3300030500 Bacteria 2914
180 Ga0268256_1011182 3300030500 Bacteria 2857
181 Ga0265327_10000008 3300031251 Bacteria 658870
182 Ga0307410_10066042 3300031852 Bacteria 2490
183 Ga0307407_10018700 3300031903 Bacteria 3511
184 Ga0307412_10111672 3300031911 Bacteria 1953
185 Ga0307409_100124216 3300031995 Bacteria 2192
186 Ga0307414_10030315 3300032004 Bacteria 3531
187 Ga0307411_10120742 3300032005 Bacteria 1895
188 Ga0307415_100150446 3300032126 Bacteria 1791
189 Ga0400483_135004 3300039062 Bacteria 39642
190 Ga0400483_218973 3300039062 Bacteria 22301
191 Ga0436365_0940869 3300039437 Bacteria 12573
192 Ga0436365_1703046 3300039437 Bacteria 140494
193 Ga0439438_003467 3300041405 Bacteria 6371
194 Ga0439438_004641 3300041405 Bacteria 5224
195 Ga0439466_0000002 3300041411 Bacteria 494198
196 Ga0439452_000004 3300042010 Bacteria 764268
197 Ga0439452_000005 3300042010 Bacteria 646919
198 Ga0439452_000007 3300042010 Bacteria 613625
199 Ga0439452_000256 3300042010 Bacteria 36014
200 Ga0439452_001637 3300042010 Bacteria 8851
201 Ga0439452_006816 3300042010 Bacteria 3548
202 Ga0439463_005560 3300042016 Bacteria 3133
203 Ga0450907_000016 3300042146 Bacteria 84269
204 Ga0466981_0000025 3300044669 Bacteria 75290
205 Ga0495627_000144 3300046453 Bacteria 84959
206 Ga0495591_000653 3300046458 Bacteria 25584
207 Ga0495591_001563 3300046458 Bacteria 13951
208 Ga0495650_0000004 3300046471 Bacteria 779487
209 Ga0495650_0000176 3300046471 Bacteria 139443
210 Ga0495650_0000249 3300046471 Bacteria 105816
211 Ga0495605_0044255 3300046474 Bacteria 2202
212 Ga0495585_0057708 3300046492 Bacteria 2142
213 Ga0495607_0009337 3300046501 Bacteria 6645
214 Ga0495606_0001233 3300046507 Bacteria 35796
215 Ga0495620_0014174 3300046515 Bacteria 4060
216 Ga0495648_0002176 3300046524 Bacteria 18410
217 Ga0495648_0002746 3300046524 Bacteria 15891
218 Ga0495654_0000201 3300046530 Bacteria 57518
219 Ga0495654_0008822 3300046530 Bacteria 5544
220 Ga0495654_0010457 3300046530 Bacteria 5047
221 Ga0495654_0018285 3300046530 Bacteria 3676
222 Ga0495597_0003753 3300046542 Bacteria 8660
223 Ga0495625_0010561 3300046660 Bacteria 7626
224 Ga0495588_0016404 3300046674 Bacteria 3579
225 Ga0495671_0002123 3300046692 Bacteria 12666
226 Ga0495649_0003596 3300046694 Bacteria 10384
227 Ga0495649_0012439 3300046694 Bacteria 4948
228 Ga0495649_0012809 3300046694 Bacteria 4862
229 Ga0495589_0000043 3300046794 Bacteria 130043
230 Ga0495589_0002792 3300046794 Bacteria 9656
231 Ga0495660_0000022 3300046810 Bacteria 284337
232 Ga0495660_0000857 3300046810 Bacteria 22480
233 Ga0495672_0000085 3300047320 Bacteria 156067
234 Ga0495672_0000133 3300047320 Bacteria 110887
235 Ga0495672_0000216 3300047320 Bacteria 82407
236 Ga0495679_000114 3300047446 Bacteria 71507
237 Ga0495679_003365 3300047446 Bacteria 7716
238 Ga0495673_0000165 3300047469 Bacteria 113102
239 Ga0495673_0001357 3300047469 Bacteria 19798
240 Ga0495681_0028717 3300047470 Bacteria 2857
241 Ga0496102_0005321 3300048905 Bacteria 10929
242 Ga0496104_0000113 3300048907 Bacteria 76556
243 Ga0496104_0004430 3300048907 Bacteria 12235
244 Ga0496105_0008405 3300048908 Bacteria 8023
245 Ga0496105_0035280 3300048908 Bacteria 4116
246 Ga0496116_0000009 3300048919 Bacteria 716119
247 Ga0496116_0000103 3300048919 Bacteria 193529
248 Ga0496116_0000188 3300048919 Bacteria 123223
249 Ga0496116_0000463 3300048919 Bacteria 56223
250 Ga0496116_0004221 3300048919 Bacteria 13810
251 Ga0496116_0039753 3300048919 Bacteria 3246
252 Ga0496117_0000078 3300048920 Bacteria 227068
253 Ga0496117_0000116 3300048920 Bacteria 178919
254 Ga0496117_0001009 3300048920 Bacteria 43066
255 Ga0496117_0005252 3300048920 Bacteria 13742
256 Ga0496117_0005485 3300048920 Bacteria 13294
257 Ga0496117_0009431 3300048920 Bacteria 9084
258 Ga0496117_0030247 3300048920 Bacteria 4158
259 Ga0496117_0038108 3300048920 Bacteria 3570
260 Ga0496118_0000059 3300048921 Bacteria 226336
261 Ga0496118_0000143 3300048921 Bacteria 126057
262 Ga0496118_0001444 3300048921 Bacteria 35768
263 Ga0496118_0004519 3300048921 Bacteria 16435
264 Ga0496118_0005488 3300048921 Bacteria 14395
265 Ga0496118_0029878 3300048921 Bacteria 4561
266 Ga0496118_0033350 3300048921 Bacteria 4225
267 Ga0496118_0083156 3300048921 Bacteria 2239
268 Ga0496118_0105200 3300048921 Bacteria 1892
269 Ga0496119_0000032 3300048922 Bacteria 222289
270 Ga0496119_0000312 3300048922 Bacteria 68025
271 Ga0496119_0000439 3300048922 Bacteria 57025
272 Ga0496119_0000471 3300048922 Bacteria 54977
273 Ga0496119_0003440 3300048922 Bacteria 16437
274 Ga0496119_0003442 3300048922 Bacteria 16436
275 Ga0496119_0013374 3300048922 Bacteria 6548
276 Ga0496119_0016087 3300048922 Bacteria 5713
277 Ga0496119_0018880 3300048922 Bacteria 5106
278 Ga0496119_0019270 3300048922 Bacteria 5035
279 Ga0496119_0022416 3300048922 Bacteria 4521
280 Ga0496119_0024639 3300048922 Bacteria 4227
281 Ga0496119_0047683 3300048922 Bacteria 2663
282 Ga0496119_0048289 3300048922 Bacteria 2640
283 Ga0496120_0000373 3300048923 Bacteria 72921
284 Ga0496120_0000442 3300048923 Bacteria 65629
285 Ga0496120_0000659 3300048923 Bacteria 50722
286 Ga0496120_0000900 3300048923 Bacteria 41672
287 Ga0496120_0001213 3300048923 Bacteria 32593
288 Ga0496120_0002908 3300048923 Bacteria 16361
289 Ga0496120_0008060 3300048923 Bacteria 7743
290 Ga0496120_0012537 3300048923 Bacteria 5765
291 Ga0496121_0005226 3300048924 Bacteria 16804
292 Ga0496121_0032597 3300048924 Bacteria 4732
293 Ga0496121_0033945 3300048924 Bacteria 4603
294 Ga0496121_0034511 3300048924 Bacteria 4552
295 Ga0496121_0049257 3300048924 Bacteria 3574
296 Ga0496121_0061119 3300048924 Bacteria 3093
297 Ga0496121_0104335 3300048924 Bacteria 2178
298 Ga0496122_0000174 3300048925 Bacteria 153401
299 Ga0496122_0000872 3300048925 Bacteria 56735
300 Ga0496122_0004693 3300048925 Bacteria 16780
301 Ga0496122_0008455 3300048925 Bacteria 11098
302 Ga0496122_0009564 3300048925 Bacteria 10175
303 Ga0496122_0018909 3300048925 Bacteria 6327
304 Ga0496123_0000133 3300048926 Bacteria 153401
305 Ga0496123_0000183 3300048926 Bacteria 126284
306 Ga0496123_0002444 3300048926 Bacteria 23055
307 Ga0496123_0003721 3300048926 Bacteria 16780
308 Ga0496123_0006885 3300048926 Bacteria 10877
309 Ga0496123_0021782 3300048926 Bacteria 4967
310 Ga0496123_0033704 3300048926 Bacteria 3679
311 Ga0496123_0043338 3300048926 Bacteria 3092
312 Ga0496124_0000053 3300048927 Bacteria 252285
313 Ga0496124_0000169 3300048927 Bacteria 131658
314 Ga0496124_0000268 3300048927 Bacteria 100793
315 Ga0496124_0000332 3300048927 Bacteria 87485
316 Ga0496124_0001968 3300048927 Bacteria 28054
317 Ga0496124_0003409 3300048927 Bacteria 19503
318 Ga0496124_0037148 3300048927 Bacteria 4239
319 Ga0496124_0050668 3300048927 Bacteria 3537
320 Ga0496124_0072028 3300048927 Bacteria 2862
321 Ga0496124_0078356 3300048927 Bacteria 2723
322 Ga0496125_0000056 3300048928 Bacteria 271016
323 Ga0496125_0000609 3300048928 Bacteria 60758
324 Ga0496125_0005588 3300048928 Bacteria 13893
325 Ga0496125_0006147 3300048928 Bacteria 13086
326 Ga0496125_0033678 3300048928 Bacteria 4528
327 Ga0496125_0036514 3300048928 Bacteria 4288
328 Ga0496125_0043920 3300048928 Bacteria 3786
329 Ga0496125_0047130 3300048928 Bacteria 3608
330 Ga0496126_0000625 3300048929 Bacteria 66409
331 Ga0496126_0002058 3300048929 Bacteria 28228
332 Ga0496126_0009507 3300048929 Bacteria 10315
333 Ga0496126_0033138 3300048929 Bacteria 4861
334 Ga0495678_000287 3300049459 Bacteria 55395
335 Ga0495682_0000024 3300049460 Bacteria 153545
336 Ga0501067_0053406 3300049583 Bacteria 2239
337 Ga0501083_0007514 3300049744 Bacteria 7722
338 Ga0501044_0095140 3300049823 Bacteria 3002
339 nmdc:mga00v17_20277_c1 3300050491 Bacteria 3806
340 nmdc:mga00v17_6933_c1 3300050491 Bacteria 6025
341 Ga0500621_000049 3300053126 Bacteria 14851

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039437 Ga0436365_0940869 Ga0436365_0940869_6383_7879 496
2 3300003856 Ga0058692_1000620 Ga0058692_10006204 497
3 3300046492 Ga0495585_0057708 Ga0495585_0057708_598_2094 498
4 3300005354 Ga0070675_100047333 Ga0070675_1000473332 501
5 3300025926 Ga0207659_10009936 Ga0207659_100099364 501
6 iso_pu_bacteria 2896429255 2896431844 516
7 3300005338 Ga0068868_100000676 Ga0068868_1000006766 517
8 3300005339 Ga0070660_100002958 Ga0070660_1000029582 517
9 3300005366 Ga0070659_100000025 Ga0070659_10000002552 517
10 3300025919 Ga0207657_10001801 Ga0207657_100018014 517
11 3300025932 Ga0207690_10000005 Ga0207690_10000005424 517
12 3300026023 Ga0207677_10000059 Ga0207677_1000005958 517
13 3300031911 Ga0307412_10111672 Ga0307412_101116722 517
14 3300031852 Ga0307410_10066042 Ga0307410_100660422 521
15 3300031903 Ga0307407_10018700 Ga0307407_100187003 521
16 3300031995 Ga0307409_100124216 Ga0307409_1001242161 521
17 3300032004 Ga0307414_10030315 Ga0307414_100303152 521
18 3300032005 Ga0307411_10120742 Ga0307411_101207422 521
19 3300032126 Ga0307415_100150446 Ga0307415_1001504461 521
20 3300027312 Ga0209371_1006903 Ga0209371_10069034 523
21 3300030500 Ga0268256_1010909 Ga0268256_10109092 523
22 3300048919 Ga0496116_0000009 Ga0496116_0000009_712427_714004 525
23 3300003856 Ga0058692_1004277 Ga0058692_10042774 526
24 3300027312 Ga0209371_1000352 Ga0209371_10003524 526
25 3300030500 Ga0268256_1000295 Ga0268256_100029544 526
26 3300031251 Ga0265327_10000008 Ga0265327_10000008363 526
27 iso_pu_bacteria 2537561728 2538426923 527
28 iso_pu_bacteria 2919688452 2919691335 527
29 3300005468 Ga0070707_100136221 Ga0070707_1001362212 528
30 3300025923 Ga0207681_10118912 Ga0207681_101189121 528
31 3300049823 Ga0501044_0095140 Ga0501044_0095140_1015_2622 528
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100 iso_pu_bacteria 2600255290 2601660723 529
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176 iso_pu_bacteria 2919493220 2919494337 530
177 iso_pu_bacteria 2919543075 2919543965 530
178 iso_pu_bacteria 2923525760 2923529058 530
179 3300049744 Ga0501083_0007514 Ga0501083_0007514_3205_4866 531
180 3300001989 JGI24739J22299_10000058 JGI24739J22299_1000005819 532
181 3300002737 JGI25162J39368_1000031 JGI25162J39368_10000313 532
182 3300002771 JGI25163J39215_1000109 JGI25163J39215_100010927 532
183 3300002772 JGI25164J39214_1000050 JGI25164J39214_1000050109 532
184 3300003751 Ga0055538_1000004 Ga0055538_10000043 532
185 3300003752 Ga0055539_1000004 Ga0055539_1000004554 532
186 3300003756 Ga0055533_1000007 Ga0055533_10000073 532
187 3300003759 Ga0055525_1000007 Ga0055525_10000073 532
188 3300003841 Ga0055541_1000004 Ga0055541_10000043 532
189 3300005272 Ga0065703_1018752 Ga0065703_101875214 532
190 3300005347 Ga0070668_100012296 Ga0070668_1000122965 532
191 3300005548 Ga0070665_100020841 Ga0070665_1000208413 532
192 3300006946 Ga0079104_1000107 Ga0079104_1000107114 532
193 3300006946 Ga0079104_1001027 Ga0079104_10010273 532
194 3300006946 Ga0079104_1011243 Ga0079104_10112433 532
195 3300009011 Ga0105251_10000177 Ga0105251_100001773 532
196 3300009011 Ga0105251_10000237 Ga0105251_1000023737 532
197 3300009011 Ga0105251_10000643 Ga0105251_100006436 532
198 3300009011 Ga0105251_10001528 Ga0105251_1000152813 532
199 3300009011 Ga0105251_10002524 Ga0105251_100025248 532
200 3300009011 Ga0105251_10015351 Ga0105251_100153512 532
201 3300009011 Ga0105251_10017608 Ga0105251_100176083 532
202 3300009036 Ga0105244_10000075 Ga0105244_100000753 532
203 3300009036 Ga0105244_10000434 Ga0105244_100004342 532
204 3300009036 Ga0105244_10003478 Ga0105244_100034785 532
205 3300009036 Ga0105244_10014380 Ga0105244_100143803 532
206 3300009092 Ga0105250_10000084 Ga0105250_100000843 532
207 3300009092 Ga0105250_10006234 Ga0105250_100062343 532
208 3300009092 Ga0105250_10010047 Ga0105250_100100472 532
209 3300009092 Ga0105250_10033079 Ga0105250_100330792 532
210 3300009101 Ga0105247_10001307 Ga0105247_100013073 532
211 3300009174 Ga0105241_10000023 Ga0105241_100000235 532
212 3300011119 Ga0105246_10041215 Ga0105246_100412152 532
213 3300013100 Ga0157373_10028835 Ga0157373_100288352 532
214 3300013102 Ga0157371_10000381 Ga0157371_100003813 532
215 3300013102 Ga0157371_10005142 Ga0157371_100051426 532
216 3300013104 Ga0157370_10000888 Ga0157370_1000088824 532
217 3300013104 Ga0157370_10015696 Ga0157370_100156965 532
218 3300013105 Ga0157369_10004316 Ga0157369_100043162 532
219 3300013306 Ga0163162_10047152 Ga0163162_100471523 532
220 3300013306 Ga0163162_10099443 Ga0163162_100994432 532
221 3300013307 Ga0157372_10139774 Ga0157372_101397741 532
222 3300014497 Ga0182008_10011465 Ga0182008_100114653 532
223 3300017792 Ga0163161_10000049 Ga0163161_1000004999 532
224 3300017792 Ga0163161_10024249 Ga0163161_100242493 532
225 3300025207 Ga0209760_100081 Ga0209760_1000813 532
226 3300025224 Ga0209784_100001 Ga0209784_1000013 532
227 3300025225 Ga0209566_100001 Ga0209566_1000013 532
228 3300025226 Ga0209674_100002 Ga0209674_1000023 532
229 3300025230 Ga0209563_100008 Ga0209563_1000083 532
230 3300025231 Ga0207427_100002 Ga0207427_1000021277 532
231 3300025233 Ga0209437_100100 Ga0209437_1001003 532
232 3300025233 Ga0209437_100114 Ga0209437_100114197 532
233 3300025253 Ga0209677_100004 Ga0209677_1000043 532
234 3300025711 Ga0207696_1000014 Ga0207696_1000014447 532
235 3300025711 Ga0207696_1000222 Ga0207696_10002222 532
236 3300025711 Ga0207696_1000441 Ga0207696_100044129 532
237 3300025711 Ga0207696_1001730 Ga0207696_10017304 532
238 3300025711 Ga0207696_1002732 Ga0207696_10027324 532
239 3300025728 Ga0207655_1000025 Ga0207655_10000253 532
240 3300025728 Ga0207655_1000028 Ga0207655_10000282 532
241 3300025728 Ga0207655_1000519 Ga0207655_10005193 532
242 3300025728 Ga0207655_1008432 Ga0207655_10084324 532
243 3300025728 Ga0207655_1011637 Ga0207655_10116373 532
244 3300025728 Ga0207655_1016425 Ga0207655_10164253 532
245 3300025735 Ga0207713_1000007 Ga0207713_1000007501 532
246 3300025735 Ga0207713_1000125 Ga0207713_10001253 532
247 3300025735 Ga0207713_1000152 Ga0207713_10001524 532
248 3300025735 Ga0207713_1006612 Ga0207713_10066125 532
249 3300025735 Ga0207713_1011277 Ga0207713_10112773 532
250 3300025735 Ga0207713_1027938 Ga0207713_10279382 532
251 3300025900 Ga0207710_10000007 Ga0207710_100000076 532
252 3300025911 Ga0207654_10000026 Ga0207654_100000265 532
253 3300027111 Ga0209281_1000096 Ga0209281_10000965 532
254 3300027111 Ga0209281_1000220 Ga0209281_1000220113 532
255 3300027312 Ga0209371_1000784 Ga0209371_100078418 532
256 3300027312 Ga0209371_1006511 Ga0209371_10065112 532
257 3300027312 Ga0209371_1010840 Ga0209371_10108402 532
258 3300030500 Ga0268256_1000659 Ga0268256_10006594 532
259 3300030500 Ga0268256_1006550 Ga0268256_10065502 532
260 3300041411 Ga0439466_0000002 Ga0439466_0000002_63_1661 532
261 3300042010 Ga0439452_000004 Ga0439452_000004_4442_6040 532
262 3300042010 Ga0439452_006816 Ga0439452_006816_380_1978 532
263 3300042016 Ga0439463_005560 Ga0439463_005560_1360_2958 532
264 3300042146 Ga0450907_000016 Ga0450907_000016_81190_82788 532
265 3300046453 Ga0495627_000144 Ga0495627_000144_81310_82908 532
266 3300046458 Ga0495591_001563 Ga0495591_001563_4687_6285 532
267 3300046471 Ga0495650_0000004 Ga0495650_0000004_1683_3281 532
268 3300046471 Ga0495650_0000176 Ga0495650_0000176_133136_134734 532
269 3300046474 Ga0495605_0044255 Ga0495605_0044255_471_2069 532
270 3300046501 Ga0495607_0009337 Ga0495607_0009337_1975_3573 532
271 3300046507 Ga0495606_0001233 Ga0495606_0001233_29519_31117 532
272 3300046524 Ga0495648_0002176 Ga0495648_0002176_496_2094 532
273 3300046524 Ga0495648_0002746 Ga0495648_0002746_12195_13793 532
274 3300046530 Ga0495654_0000201 Ga0495654_0000201_51290_52888 532
275 3300046530 Ga0495654_0008822 Ga0495654_0008822_1464_3062 532
276 3300046530 Ga0495654_0010457 Ga0495654_0010457_2224_3822 532
277 3300046542 Ga0495597_0003753 Ga0495597_0003753_5487_7085 532
278 3300046660 Ga0495625_0010561 Ga0495625_0010561_5071_6669 532
279 3300046674 Ga0495588_0016404 Ga0495588_0016404_1305_2903 532
280 3300046692 Ga0495671_0002123 Ga0495671_0002123_4673_6271 532
281 3300046694 Ga0495649_0003596 Ga0495649_0003596_4186_5784 532
282 3300046794 Ga0495589_0000043 Ga0495589_0000043_1978_3576 532
283 3300046794 Ga0495589_0002792 Ga0495589_0002792_4652_6250 532
284 3300046810 Ga0495660_0000022 Ga0495660_0000022_1699_3297 532
285 3300046810 Ga0495660_0000857 Ga0495660_0000857_3861_5459 532
286 3300047320 Ga0495672_0000085 Ga0495672_0000085_4664_6262 532
287 3300047320 Ga0495672_0000133 Ga0495672_0000133_107505_109103 532
288 3300047320 Ga0495672_0000216 Ga0495672_0000216_1490_3088 532
289 3300047446 Ga0495679_000114 Ga0495679_000114_68346_69944 532
290 3300047469 Ga0495673_0001357 Ga0495673_0001357_13520_15118 532
291 3300047470 Ga0495681_0028717 Ga0495681_0028717_853_2457 532
292 3300048905 Ga0496102_0005321 Ga0496102_0005321_768_2366 532
293 3300048907 Ga0496104_0004430 Ga0496104_0004430_1655_3253 532
294 3300048908 Ga0496105_0008405 Ga0496105_0008405_1027_2625 532
295 3300048919 Ga0496116_0000103 Ga0496116_0000103_187503_189101 532
296 3300048919 Ga0496116_0000188 Ga0496116_0000188_1689_3287 532
297 3300048919 Ga0496116_0000463 Ga0496116_0000463_1678_3276 532
298 3300048920 Ga0496117_0000078 Ga0496117_0000078_223944_225542 532
299 3300048920 Ga0496117_0000116 Ga0496117_0000116_175657_177255 532
300 3300048920 Ga0496117_0001009 Ga0496117_0001009_4398_5996 532
301 3300048920 Ga0496117_0005485 Ga0496117_0005485_1045_2643 532
302 3300048921 Ga0496118_0000059 Ga0496118_0000059_1527_3125 532
303 3300048921 Ga0496118_0000143 Ga0496118_0000143_122804_124402 532
304 3300048921 Ga0496118_0001444 Ga0496118_0001444_1870_3468 532
305 3300048921 Ga0496118_0005488 Ga0496118_0005488_4614_6212 532
306 3300048921 Ga0496118_0083156 Ga0496118_0083156_164_1762 532
307 3300048922 Ga0496119_0000312 Ga0496119_0000312_2232_3830 532
308 3300048922 Ga0496119_0000439 Ga0496119_0000439_52862_54460 532
309 3300048922 Ga0496119_0000471 Ga0496119_0000471_51891_53489 532
310 3300048922 Ga0496119_0003440 Ga0496119_0003440_13542_15140 532
311 3300048922 Ga0496119_0003442 Ga0496119_0003442_13541_15157 532
312 3300048922 Ga0496119_0019270 Ga0496119_0019270_1319_2917 532
313 3300048922 Ga0496119_0024639 Ga0496119_0024639_2300_3898 532
314 3300048922 Ga0496119_0048289 Ga0496119_0048289_262_1860 532
315 3300048923 Ga0496120_0000373 Ga0496120_0000373_2232_3830 532
316 3300048923 Ga0496120_0000442 Ga0496120_0000442_2039_3655 532
317 3300048923 Ga0496120_0000659 Ga0496120_0000659_2292_3890 532
318 3300048923 Ga0496120_0000900 Ga0496120_0000900_1494_3092 532
319 3300048923 Ga0496120_0001213 Ga0496120_0001213_1680_3278 532
320 3300048923 Ga0496120_0002908 Ga0496120_0002908_1319_2917 532
321 3300048925 Ga0496122_0000872 Ga0496122_0000872_1699_3297 532
322 3300048925 Ga0496122_0008455 Ga0496122_0008455_8474_10072 532
323 3300048926 Ga0496123_0000183 Ga0496123_0000183_1699_3297 532
324 3300048926 Ga0496123_0002444 Ga0496123_0002444_1013_2611 532
325 3300048927 Ga0496124_0000053 Ga0496124_0000053_248950_250548 532
326 3300048927 Ga0496124_0000169 Ga0496124_0000169_1694_3292 532
327 3300048927 Ga0496124_0000268 Ga0496124_0000268_97480_99078 532
328 3300048927 Ga0496124_0072028 Ga0496124_0072028_98_1696 532
329 3300048927 Ga0496124_0078356 Ga0496124_0078356_83_1681 532
330 3300048928 Ga0496125_0000056 Ga0496125_0000056_267730_269328 532
331 3300048928 Ga0496125_0005588 Ga0496125_0005588_211_1809 532
332 3300048929 Ga0496126_0000625 Ga0496126_0000625_62951_64549 532
333 3300049459 Ga0495678_000287 Ga0495678_000287_4578_6176 532
334 3300049460 Ga0495682_0000024 Ga0495682_0000024_4686_6284 532
335 3300053126 Ga0500621_000049 Ga0500621_000049_8637_10235 532
336 2162886007 SwRhRL2b_contig_1376966 SwRhRL2b_0864.00005890 533
337 3300002773 JGI25152J39213_1001661 JGI25152J39213_10016613 533
338 3300003856 Ga0058692_1001552 Ga0058692_10015525 533
339 3300003856 Ga0058692_1008154 Ga0058692_10081541 533
340 3300003856 Ga0058692_1008155 Ga0058692_10081551 533
341 3300003856 Ga0058692_1013638 Ga0058692_10136381 533
342 3300005289 Ga0065704_10000303 Ga0065704_1000030328 533
343 3300005289 Ga0065704_10003709 Ga0065704_100037093 533
344 3300005289 Ga0065704_10071761 Ga0065704_100717612 533
345 3300005548 Ga0070665_100003160 Ga0070665_10000316011 533
346 3300005548 Ga0070665_100009403 Ga0070665_1000094033 533
347 3300005577 Ga0068857_100000017 Ga0068857_1000000173 533
348 3300006051 Ga0075364_10029566 Ga0075364_100295663 533
349 3300006195 Ga0075366_10013218 Ga0075366_100132182 533
350 3300006946 Ga0079104_1000048 Ga0079104_1000048172 533
351 3300006946 Ga0079104_1001148 Ga0079104_10011483 533
352 3300006946 Ga0079104_1001276 Ga0079104_10012763 533
353 3300006946 Ga0079104_1004197 Ga0079104_10041972 533
354 3300006946 Ga0079104_1007242 Ga0079104_10072422 533
355 3300006946 Ga0079104_1010643 Ga0079104_10106432 533
356 3300006946 Ga0079104_1022700 Ga0079104_10227001 533
357 3300006946 Ga0079104_1022701 Ga0079104_10227011 533
358 3300009011 Ga0105251_10000914 Ga0105251_1000091420 533
359 3300009011 Ga0105251_10003337 Ga0105251_100033376 533
360 3300009011 Ga0105251_10012273 Ga0105251_100122733 533
361 3300009011 Ga0105251_10018330 Ga0105251_100183302 533
362 3300009036 Ga0105244_10000042 Ga0105244_10000042134 533
363 3300009036 Ga0105244_10000283 Ga0105244_100002833 533
364 3300009036 Ga0105244_10003912 Ga0105244_100039126 533
365 3300009036 Ga0105244_10006886 Ga0105244_100068864 533
366 3300009036 Ga0105244_10070063 Ga0105244_100700631 533
367 3300009092 Ga0105250_10000111 Ga0105250_1000011162 533
368 3300009092 Ga0105250_10000161 Ga0105250_100001614 533
369 3300009092 Ga0105250_10010208 Ga0105250_100102082 533
370 3300009092 Ga0105250_10011994 Ga0105250_100119943 533
371 3300013104 Ga0157370_10015141 Ga0157370_100151413 533
372 3300013105 Ga0157369_10014763 Ga0157369_100147635 533
373 3300013307 Ga0157372_10001192 Ga0157372_1000119219 533
374 3300013307 Ga0157372_10051881 Ga0157372_100518812 533
375 3300015261 Ga0182006_1000050 Ga0182006_10000504 533
376 3300015679 Ga0183366_1006 Ga0183366_10063 533
377 3300015680 Ga0183370_1006 Ga0183370_10063 533
378 3300015685 Ga0183369_1017 Ga0183369_10173 533
379 3300015687 Ga0183368_1010 Ga0183368_10103 533
380 3300021384 Ga0213876_10000402 Ga0213876_1000040229 533
381 3300025258 Ga0209129_1000008 Ga0209129_10000084 533
382 3300025711 Ga0207696_1000194 Ga0207696_10001943 533
383 3300025711 Ga0207696_1000197 Ga0207696_10001974 533
384 3300025711 Ga0207696_1005193 Ga0207696_10051932 533
385 3300025728 Ga0207655_1000055 Ga0207655_10000554 533
386 3300025728 Ga0207655_1000123 Ga0207655_10001233 533
387 3300025728 Ga0207655_1000136 Ga0207655_10001362 533
388 3300025728 Ga0207655_1000498 Ga0207655_10004983 533
389 3300025728 Ga0207655_1002889 Ga0207655_10028892 533
390 3300025728 Ga0207655_1004066 Ga0207655_10040663 533
391 3300025728 Ga0207655_1016075 Ga0207655_10160754 533
392 3300025728 Ga0207655_1032976 Ga0207655_10329762 533
393 3300025735 Ga0207713_1000154 Ga0207713_100015494 533
394 3300025735 Ga0207713_1000289 Ga0207713_10002894 533
395 3300025735 Ga0207713_1001782 Ga0207713_10017823 533
396 3300025735 Ga0207713_1003193 Ga0207713_10031935 533
397 3300025735 Ga0207713_1004197 Ga0207713_10041972 533
398 3300025735 Ga0207713_1005318 Ga0207713_10053184 533
399 3300025735 Ga0207713_1011264 Ga0207713_10112643 533
400 3300026116 Ga0207674_10000179 Ga0207674_100001792 533
401 3300027111 Ga0209281_1000022 Ga0209281_1000022496 533
402 3300027111 Ga0209281_1000166 Ga0209281_1000166152 533
403 3300027111 Ga0209281_1000405 Ga0209281_10004053 533
404 3300027111 Ga0209281_1000493 Ga0209281_100049345 533
405 3300027111 Ga0209281_1001124 Ga0209281_10011243 533
406 3300027111 Ga0209281_1002487 Ga0209281_10024874 533
407 3300027111 Ga0209281_1005423 Ga0209281_10054231 533
408 3300027111 Ga0209281_1009298 Ga0209281_10092982 533
409 3300027312 Ga0209371_1000014 Ga0209371_1000014590 533
410 3300027312 Ga0209371_1000115 Ga0209371_10001154 533
411 3300027312 Ga0209371_1000856 Ga0209371_10008564 533
412 3300027312 Ga0209371_1001337 Ga0209371_100133712 533
413 3300028379 Ga0268266_10000179 Ga0268266_100001793 533
414 3300028379 Ga0268266_10041523 Ga0268266_100415233 533
415 3300030500 Ga0268256_1000012 Ga0268256_10000123 533
416 3300030500 Ga0268256_1000097 Ga0268256_1000097129 533
417 3300030500 Ga0268256_1000120 Ga0268256_100012093 533
418 3300030500 Ga0268256_1001148 Ga0268256_10011483 533
419 3300030500 Ga0268256_1011182 Ga0268256_10111822 533
420 3300039062 Ga0400483_135004 Ga0400483_135004_37747_39384 533
421 3300039062 Ga0400483_218973 Ga0400483_218973_14722_16359 533
422 3300039437 Ga0436365_1703046 Ga0436365_1703046_136499_138100 533
423 3300041405 Ga0439438_003467 Ga0439438_003467_1953_3677 533
424 3300041405 Ga0439438_004641 Ga0439438_004641_2090_3691 533
425 3300042010 Ga0439452_000005 Ga0439452_000005_643359_645077 533
426 3300042010 Ga0439452_000007 Ga0439452_000007_610018_611742 533
427 3300042010 Ga0439452_000256 Ga0439452_000256_1459_3060 533
428 3300042010 Ga0439452_001637 Ga0439452_001637_1529_3130 533
429 3300044669 Ga0466981_0000025 Ga0466981_0000025_1345_3096 533
430 3300046458 Ga0495591_000653 Ga0495591_000653_22537_24138 533
431 3300046471 Ga0495650_0000249 Ga0495650_0000249_102719_104320 533
432 3300046515 Ga0495620_0014174 Ga0495620_0014174_1739_3340 533
433 3300046530 Ga0495654_0018285 Ga0495654_0018285_633_2234 533
434 3300046694 Ga0495649_0012439 Ga0495649_0012439_1841_3442 533
435 3300046694 Ga0495649_0012809 Ga0495649_0012809_1507_3108 533
436 3300047446 Ga0495679_003365 Ga0495679_003365_1751_3352 533
437 3300047469 Ga0495673_0000165 Ga0495673_0000165_1450_3051 533
438 3300048907 Ga0496104_0000113 Ga0496104_0000113_73327_74928 533
439 3300048908 Ga0496105_0035280 Ga0496105_0035280_1020_2621 533
440 3300048919 Ga0496116_0004221 Ga0496116_0004221_10549_12150 533
441 3300048919 Ga0496116_0039753 Ga0496116_0039753_511_2112 533
442 3300048920 Ga0496117_0005252 Ga0496117_0005252_1459_3060 533
443 3300048920 Ga0496117_0009431 Ga0496117_0009431_6061_7662 533
444 3300048920 Ga0496117_0030247 Ga0496117_0030247_651_2369 533
445 3300048920 Ga0496117_0038108 Ga0496117_0038108_1675_3276 533
446 3300048921 Ga0496118_0004519 Ga0496118_0004519_1459_3060 533
447 3300048921 Ga0496118_0029878 Ga0496118_0029878_1233_2834 533
448 3300048921 Ga0496118_0033350 Ga0496118_0033350_1791_3509 533
449 3300048921 Ga0496118_0105200 Ga0496118_0105200_151_1752 533
450 3300048922 Ga0496119_0000032 Ga0496119_0000032_1834_3552 533
451 3300048922 Ga0496119_0013374 Ga0496119_0013374_1327_3051 533
452 3300048922 Ga0496119_0016087 Ga0496119_0016087_1731_3446 533
453 3300048922 Ga0496119_0018880 Ga0496119_0018880_1858_3459 533
454 3300048922 Ga0496119_0022416 Ga0496119_0022416_1431_3032 533
455 3300048922 Ga0496119_0047683 Ga0496119_0047683_333_1934 533
456 3300048923 Ga0496120_0008060 Ga0496120_0008060_4192_5910 533
457 3300048923 Ga0496120_0012537 Ga0496120_0012537_1703_3418 533
458 3300048924 Ga0496121_0005226 Ga0496121_0005226_1480_3081 533
459 3300048924 Ga0496121_0032597 Ga0496121_0032597_1879_3480 533
460 3300048924 Ga0496121_0033945 Ga0496121_0033945_1549_3150 533
461 3300048924 Ga0496121_0034511 Ga0496121_0034511_1539_3140 533
462 3300048924 Ga0496121_0049257 Ga0496121_0049257_1473_3074 533
463 3300048924 Ga0496121_0061119 Ga0496121_0061119_33_1634 533
464 3300048924 Ga0496121_0104335 Ga0496121_0104335_563_2164 533
465 3300048925 Ga0496122_0000174 Ga0496122_0000174_150294_151895 533
466 3300048925 Ga0496122_0004693 Ga0496122_0004693_1400_3001 533
467 3300048925 Ga0496122_0009564 Ga0496122_0009564_6132_7733 533
468 3300048925 Ga0496122_0018909 Ga0496122_0018909_4082_5683 533
469 3300048926 Ga0496123_0000133 Ga0496123_0000133_1507_3108 533
470 3300048926 Ga0496123_0003721 Ga0496123_0003721_1400_3001 533
471 3300048926 Ga0496123_0006885 Ga0496123_0006885_6953_8554 533
472 3300048926 Ga0496123_0021782 Ga0496123_0021782_1949_3550 533
473 3300048926 Ga0496123_0033704 Ga0496123_0033704_553_2154 533
474 3300048926 Ga0496123_0043338 Ga0496123_0043338_231_1949 533
475 3300048927 Ga0496124_0000332 Ga0496124_0000332_83928_85646 533
476 3300048927 Ga0496124_0001968 Ga0496124_0001968_1632_3233 533
477 3300048927 Ga0496124_0003409 Ga0496124_0003409_16230_17831 533
478 3300048927 Ga0496124_0037148 Ga0496124_0037148_1185_2786 533
479 3300048927 Ga0496124_0050668 Ga0496124_0050668_1307_3049 533
480 3300048928 Ga0496125_0000609 Ga0496125_0000609_57459_59060 533
481 3300048928 Ga0496125_0006147 Ga0496125_0006147_10032_11633 533
482 3300048928 Ga0496125_0033678 Ga0496125_0033678_1503_3104 533
483 3300048928 Ga0496125_0036514 Ga0496125_0036514_1263_2864 533
484 3300048928 Ga0496125_0043920 Ga0496125_0043920_894_2612 533
485 3300048928 Ga0496125_0047130 Ga0496125_0047130_1484_3085 533
486 3300048929 Ga0496126_0002058 Ga0496126_0002058_25162_26763 533
487 3300048929 Ga0496126_0009507 Ga0496126_0009507_1454_3055 533
488 3300048929 Ga0496126_0033138 Ga0496126_0033138_1346_3079 533
489 3300050491 nmdc:mga00v17_20277_c1 nmdc:mga00v17_20277_c1_1671_3272 533
490 3300050491 nmdc:mga00v17_6933_c1 nmdc:mga00v17_6933_c1_2866_4467 533
491 iso_pu_bacteria 2565956521 2566035226 533
492 iso_pu_bacteria 2919497567 2919498842 533

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01274

MS_TIM-barrel

Malate synthase, TIM barrel domain

212

458

0.99

PF20656

MS_N

Malate synthase, N-terminal domain

59

122

0.97

PF20659

MS_C

Malate synthase, C-terminal

462

582

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cv2-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9946 10 533
3cv2-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9927 10 533
3cux-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9872 10 532
3cux-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9852 10 532
5vfb-assembly2.cif.gz_B 1.36 angstrom resolution crystal structure of malate synthase g from pseudomonas aeruginosa in complex with glycolic acid. 0.8249 27 531
ID Description Score Start End Superfamily
3cv2A02 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 1.001 412 533 1.20.1220.12
3cv2A02 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.9928 412 533 1.20.1220.12
3cuxA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Malate synthase, domain 3 0.9895 10 411 3.20.20.360
3cuxA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Malate synthase, domain 3 0.9869 10 411 3.20.20.360
af_A0A1D6E7V9_424_548_1.20.1220.12 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.9823 413 533 1.20.1220.12
ID Description Score Start End GO Terms
AF-A0A379T2J6-F1-model_v4 malate synthase (EC 2.3.3.9) 1.005 164 254 GO:0004474
GO:0005737
GO:0006097
AF-A0A6M1HSQ7-F1-model_v4 deleted 1.002 83 273
AF-A0A447TQD9-F1-model_v4 malate synthase (EC 2.3.3.9) 1.002 115 216 GO:0004474
GO:0005737
GO:0006097
AF-A0A3D2BAB0-F1-model_v4 malate synthase (EC 2.3.3.9) 1.001 142 277 GO:0004474
GO:0005737
GO:0006097
AF-A0A6D0M6N3-F1-model_v4 deleted 1.001 162 289

Feature Viewer

pLDDT pTM Quality
93.73 0.93 High
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Predicted Structure (AlphaFold2)

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