F452110

General Info

Members Datasets Scaffolds Average Seq Length
479 378 213 330

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0000005|Ga0496121_0000005_514118_515233
Length 371
Sequence LYETPETLTRCRLVVCVSLDASPLNWNWKANFKYQGGLAVPRFFGFYAMVVVTCLSLLAFTQVRADENTSYPIVIKHALGTTTIAKKPERVATVAWANHEVPLALGIVPVGFAAANFGDDDGDGLLPWVAEKLKELGTEKPVLFDEGDGIDFEAIAATQPDVILAAYSGLSQADYDTLSQIAPVVAYPESSWATDWRDMIRFNSAGLGMAKEGDALIKRIEKEIADTVAGHRQLEGKSAMFVTHLDTTNLSIVNFYTANDTRVKFFTDLGLKSPKSVLDATTKGQFAAGVSAERVDAFDDVDIVVTYGSQALLDAVNADPLLSRMPAVANGAIVMLGRNPLGTASNPTPLSISWVLKDYVNLLAEAAGKSK

Samples

Sample ID Description Type Environment
1 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
2 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
3 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
4 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
5 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
6 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
7 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
8 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
9 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
10 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
11 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
12 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
13 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
14 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
15 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
16 2551306086 Sinorhizobium meliloti AK11 Isolate Nodule
17 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
18 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
19 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
20 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
21 2551306092 Sinorhizobium meliloti AK75 Isolate Nodule
22 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
23 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
24 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
25 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
26 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
27 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
28 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
29 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
30 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
31 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
32 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
33 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
34 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
35 2643221553 Microbacterium sp. Root553 Isolate Unclassified
36 2643221557 Ensifer sp. Root558 Isolate Unclassified
37 2643221568 Rhizobium sp. Root564 Isolate Unclassified
38 2643221582 Rhizobium sp. Root651 Isolate Unclassified
39 2643221599 Rhizobium sp. Root708 Isolate Unclassified
40 2643221610 Ensifer sp. Root74 Isolate Unclassified
41 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
42 2643221668 Ensifer sp. Root423 Isolate Unclassified
43 2643221675 Ensifer sp. Root1298 Isolate Unclassified
44 2643221680 Ensifer sp. Root1312 Isolate Unclassified
45 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
46 2643221693 Rhizobium sp. Root491 Isolate Unclassified
47 2643221719 Rhizobium sp. Root274 Isolate Unclassified
48 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
49 2643221726 Ensifer sp. Root954 Isolate Unclassified
50 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
51 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
52 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
53 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
54 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
55 2773857759 Microbacterium sp. 1294 Isolate Unclassified
56 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
57 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
58 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
59 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
60 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
61 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
62 2818991441 Niallia circulans 3243 Isolate Rhizosphere
63 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
64 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
65 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
66 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
67 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
68 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
69 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
70 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
71 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
72 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
73 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
74 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
75 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
76 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
77 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
78 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
79 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
80 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
81 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
82 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
83 2854911287 Brucella lupini LUP21 Isolate Unclassified
84 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
85 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
86 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
87 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
88 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
89 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
90 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
91 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
92 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
93 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
94 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
95 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
96 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
97 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
98 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
99 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
100 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
101 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
102 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
103 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
104 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
105 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
106 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
107 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
108 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
109 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
110 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
111 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
112 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
113 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
114 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
115 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
116 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
117 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
118 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
119 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
120 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
121 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
122 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
123 2924179722 Sinorhizobium meliloti USDA1280 Isolate Nodule
124 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
125 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
126 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
127 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
128 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
129 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
130 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
131 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
132 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
133 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
134 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
135 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
136 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
137 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
138 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
139 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
140 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
141 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
142 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
143 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
144 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
145 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
146 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
147 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
148 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
149 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
150 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
151 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
152 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
153 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
154 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
155 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
156 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
157 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
158 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
159 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
160 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
161 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
162 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
163 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
164 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
165 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
166 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
167 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
168 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
169 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
170 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
171 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
172 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
173 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
174 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
175 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
176 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
177 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
178 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
179 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
180 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
181 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
182 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
183 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
184 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
185 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
186 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
187 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
188 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
189 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
190 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
191 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
192 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
193 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
194 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
195 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
196 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
197 2964705432 Sinorhizobium meliloti USDA1614 Isolate Nodule
198 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
199 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
200 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
201 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
202 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
203 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
204 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
205 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
206 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
207 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
208 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
209 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
210 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
211 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
212 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
213 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
214 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
215 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
216 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
217 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
218 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
219 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
220 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
221 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
222 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
223 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
224 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
225 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
226 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
227 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
228 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
229 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
230 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
231 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
232 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
233 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
234 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
235 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
236 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
237 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
238 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
239 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
240 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
241 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
242 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
243 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
244 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
245 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
246 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
247 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
248 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
249 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
250 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
251 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
252 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
253 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
254 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
255 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
256 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
257 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
258 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
259 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
260 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
261 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
262 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
263 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
264 3300003559 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_43 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
265 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
266 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
267 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
268 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
269 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
270 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
271 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
272 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
273 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
274 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
275 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
276 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
277 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
278 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
279 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
280 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
281 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
282 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
283 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
284 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
285 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
286 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
287 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
288 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
289 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
290 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
291 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
292 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
293 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
294 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
295 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
296 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
297 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
298 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
299 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
300 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
301 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
302 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
303 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
304 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
305 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
306 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
307 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
308 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
309 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
310 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
311 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
312 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
313 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
314 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
315 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
316 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
317 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
318 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
319 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
320 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
321 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
322 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
323 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
324 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
325 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
326 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
327 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
328 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
329 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
330 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
331 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
332 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
333 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
334 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
335 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
336 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
337 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
338 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
339 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
340 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
341 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
342 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
343 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
344 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
345 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
346 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
347 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
348 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
349 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
350 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
351 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
352 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
353 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
354 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
355 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
356 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
357 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
358 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
359 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
360 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
361 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
362 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
363 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
364 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
365 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
366 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
367 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
368 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
369 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
370 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
371 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
372 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
373 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
374 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
375 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
376 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
377 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
378 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 44.05
Metatranscriptomes 0.42
Isolates 55.53

Biome Distribution

Category Percentage (%)
Aerial Root 1.04
Bulb 0
Endosphere 16.49
Nodule 38.62
Rhizoplane 1.04
Rhizosphere 19.83
Stem 0
Stem Tuber 0
Unclassified 22.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1000092 3300002774 Bacteria 51251
2 JGI25151J46595_10000007 3300003187 Bacteria 411751
3 JGI25151J46595_10001532 3300003187 Bacteria 15448
4 rootH2_10172945 3300003320 Bacteria 3709
5 rootL2_10011437 3300003322 Bacteria 1174
6 rootH1_10057077 3300003323 Bacteria 3460
7 Ga0007427J51700_106582 3300003559 Bacteria 1955
8 Ga0006562J51391_1082793 3300003578 Bacteria 2534
9 Ga0055526_1000084 3300003771 Bacteria 86813
10 Ga0055524_1000749 3300003775 Bacteria 22110
11 Ga0055528_1000802 3300003790 Bacteria 21693
12 Ga0058692_1005924 3300003856 Bacteria 3418
13 Ga0070665_100070204 3300005548 Bacteria 3510
14 Ga0075365_10015988 3300006038 Bacteria 4551
15 Ga0075365_10106058 3300006038 Bacteria 1928
16 Ga0075363_100016212 3300006048 Bacteria 3677
17 Ga0075364_10000018 3300006051 Bacteria 55324
18 Ga0075364_10027293 3300006051 Bacteria 3646
19 Ga0075364_10045936 3300006051 Bacteria 2843
20 Ga0075364_10123128 3300006051 Bacteria 1737
21 Ga0075364_10146401 3300006051 Bacteria 1590
22 Ga0075364_10220193 3300006051 Bacteria 1288
23 Ga0075367_10087310 3300006178 Bacteria 1894
24 Ga0075369_10011458 3300006186 Bacteria 3489
25 Ga0075369_10071122 3300006186 Bacteria 1531
26 Ga0075369_10103965 3300006186 Bacteria 1276
27 Ga0075366_10116718 3300006195 Bacteria 1607
28 Ga0075370_10048074 3300006353 Bacteria 2416
29 Ga0075370_10090444 3300006353 Bacteria 1765
30 Ga0099826_10018603 3300006948 Bacteria 5240
31 Ga0105244_10087250 3300009036 Bacteria 1538
32 Ga0157373_10009724 3300013100 Bacteria 7097
33 Ga0157371_10000005 3300013102 Bacteria 416456
34 Ga0157371_10005474 3300013102 Bacteria 10701
35 Ga0157370_10001190 3300013104 Bacteria 32444
36 Ga0157369_10187248 3300013105 Bacteria 2176
37 Ga0157372_10335483 3300013307 Bacteria 1761
38 Ga0207425_1000018 3300025245 Bacteria 411841
39 Ga0207425_1002054 3300025245 Bacteria 7493
40 Ga0209129_1000019 3300025258 Bacteria 460802
41 Ga0209129_1000026 3300025258 Bacteria 411839
42 Ga0209129_1003722 3300025258 Bacteria 6455
43 Ga0209129_1003876 3300025258 Bacteria 6229
44 Ga0209025_1000035 3300025294 Bacteria 411841
45 Ga0209025_1000186 3300025294 Bacteria 155131
46 Ga0209025_1010552 3300025294 Bacteria 6248
47 Ga0209025_1034854 3300025294 Bacteria 2287
48 Ga0209564_1000017 3300025295 Bacteria 594063
49 Ga0209758_1000040 3300025297 Bacteria 411841
50 Ga0209758_1000599 3300025297 Bacteria 55985
51 Ga0209758_1001288 3300025297 Bacteria 30861
52 Ga0209758_1022691 3300025297 Bacteria 2865
53 Ga0209256_1000162 3300025299 Bacteria 137997
54 Ga0209256_1006675 3300025299 Bacteria 5997
55 Ga0207647_10028607 3300025904 Bacteria 3618
56 Ga0207709_10051481 3300025935 Bacteria 2525
57 Ga0209281_1000934 3300027111 Bacteria 24031
58 Ga0209371_1000012 3300027312 Bacteria 748304
59 Ga0209371_1002281 3300027312 Bacteria 10953
60 Ga0209282_1027516 3300027666 Bacteria 3531
61 Ga0268256_1000013 3300030500 Bacteria 752103
62 Ga0268256_1006852 3300030500 Bacteria 4163
63 Ga0307408_100052606 3300031548 Bacteria 2938
64 Ga0307406_10001084 3300031901 Bacteria 15146
65 Ga0307406_10006616 3300031901 Bacteria 6407
66 Ga0307406_10336734 3300031901 Bacteria 1174
67 Ga0307412_10013081 3300031911 Bacteria 4855
68 Ga0307409_100273619 3300031995 Bacteria 1557
69 Ga0307416_100070285 3300032002 Bacteria 2902
70 Ga0307414_10082870 3300032004 Bacteria 2353
71 Ga0395901_0140697 3300038443 Bacteria 2536
72 Ga0439465_0031057 3300041413 Bacteria 1701
73 Ga0466965_0000002 3300044683 Bacteria 297957
74 Ga0466968_0008137 3300044735 Bacteria 4010
75 Ga0495627_000241 3300046453 Bacteria 57397
76 Ga0495627_009670 3300046453 Bacteria 3539
77 Ga0495650_0085696 3300046471 Bacteria 1207
78 Ga0495650_0087150 3300046471 Bacteria 1194
79 Ga0495610_0000609 3300046512 Bacteria 35431
80 Ga0495620_0028536 3300046515 Bacteria 2594
81 Ga0495632_0000577 3300046519 Bacteria 34023
82 Ga0495632_0017837 3300046519 Bacteria 3907
83 Ga0495656_0045461 3300046615 Bacteria 1854
84 Ga0495673_0060706 3300047469 Bacteria 1621
85 Ga0495681_0004912 3300047470 Bacteria 9033
86 Ga0495686_0008721 3300047472 Bacteria 7397
87 Ga0496101_0032013 3300048904 Bacteria 3700
88 Ga0496106_0000243 3300048909 Bacteria 37924
89 Ga0496113_0119671 3300048916 Bacteria 2058
90 Ga0496116_0000042 3300048919 Bacteria 330516
91 Ga0496116_0002399 3300048919 Bacteria 19739
92 Ga0496116_0007270 3300048919 Bacteria 9865
93 Ga0496116_0009470 3300048919 Bacteria 8297
94 Ga0496117_0000083 3300048920 Bacteria 218945
95 Ga0496117_0001897 3300048920 Bacteria 28066
96 Ga0496117_0006867 3300048920 Bacteria 11308
97 Ga0496117_0007486 3300048920 Bacteria 10647
98 Ga0496117_0012907 3300048920 Bacteria 7323
99 Ga0496117_0021668 3300048920 Bacteria 5187
100 Ga0496117_0072700 3300048920 Bacteria 2297
101 Ga0496118_0008267 3300048921 Bacteria 10785
102 Ga0496118_0024567 3300048921 Bacteria 5196
103 Ga0496118_0046871 3300048921 Bacteria 3357
104 Ga0496118_0050405 3300048921 Bacteria 3195
105 Ga0496119_0011627 3300048922 Bacteria 7256
106 Ga0496119_0017463 3300048922 Bacteria 5393
107 Ga0496119_0027907 3300048922 Bacteria 3866
108 Ga0496119_0050607 3300048922 Bacteria 2559
109 Ga0496120_0000030 3300048923 Bacteria 226066
110 Ga0496120_0000031 3300048923 Bacteria 222276
111 Ga0496120_0001392 3300048923 Bacteria 29315
112 Ga0496120_0005031 3300048923 Bacteria 10720
113 Ga0496120_0017242 3300048923 Bacteria 4690
114 Ga0496120_0052665 3300048923 Bacteria 2317
115 Ga0496121_0000005 3300048924 Bacteria 1034486
116 Ga0496121_0000015 3300048924 Bacteria 571958
117 Ga0496121_0018670 3300048924 Bacteria 6979
118 Ga0496121_0063743 3300048924 Bacteria 3009
119 Ga0496122_0000050 3300048925 Bacteria 267874
120 Ga0496122_0001685 3300048925 Bacteria 34241
121 Ga0496122_0002007 3300048925 Bacteria 30292
122 Ga0496122_0008286 3300048925 Bacteria 11272
123 Ga0496122_0009718 3300048925 Bacteria 10055
124 Ga0496122_0018947 3300048925 Bacteria 6317
125 Ga0496122_0020529 3300048925 Bacteria 5961
126 Ga0496122_0058875 3300048925 Bacteria 2840
127 Ga0496122_0086862 3300048925 Bacteria 2151
128 Ga0496123_0000052 3300048926 Bacteria 236409
129 Ga0496123_0000802 3300048926 Bacteria 50829
130 Ga0496123_0002580 3300048926 Bacteria 22049
131 Ga0496123_0006828 3300048926 Bacteria 10950
132 Ga0496123_0046074 3300048926 Bacteria 2961
133 Ga0496124_0000091 3300048927 Bacteria 189706
134 Ga0496124_0000943 3300048927 Bacteria 46595
135 Ga0496124_0007535 3300048927 Bacteria 11549
136 Ga0496124_0013905 3300048927 Bacteria 7824
137 Ga0496124_0021234 3300048927 Bacteria 5985
138 Ga0496124_0035527 3300048927 Bacteria 4359
139 Ga0496124_0194602 3300048927 Bacteria 1548
140 Ga0496124_0278396 3300048927 Bacteria 1221
141 Ga0496125_0000107 3300048928 Bacteria 197483
142 Ga0496125_0004665 3300048928 Bacteria 15628
143 Ga0496125_0018188 3300048928 Bacteria 6678
144 Ga0496125_0032928 3300048928 Bacteria 4595
145 Ga0496125_0039952 3300048928 Bacteria 4031
146 Ga0496126_0000053 3300048929 Bacteria 311989
147 Ga0496126_0037230 3300048929 Bacteria 4542
148 Ga0496126_0135985 3300048929 Bacteria 2120
149 Ga0496126_0146757 3300048929 Bacteria 2025
150 Ga0501031_0114287 3300049568 Bacteria 1763
151 Ga0501032_0054262 3300049569 Bacteria 2698
152 Ga0501033_0112860 3300049570 Bacteria 1977
153 Ga0501034_0364780 3300049571 Bacteria 1371
154 Ga0501036_0153989 3300049572 Bacteria 1939
155 Ga0501036_0226406 3300049572 Bacteria 1569
156 Ga0501038_0005173 3300049574 Bacteria 12136
157 Ga0501039_0141775 3300049575 Bacteria 1887
158 Ga0501039_0161287 3300049575 Bacteria 1762
159 Ga0501039_0245411 3300049575 Bacteria 1408
160 Ga0501040_0005065 3300049576 Bacteria 8518
161 Ga0501042_0170688 3300049578 Bacteria 1569
162 Ga0501043_0092776 3300049579 Bacteria 2374
163 Ga0501046_0201140 3300049580 Bacteria 1482
164 Ga0501047_0181998 3300049581 Bacteria 1968
165 Ga0501070_0000473 3300049586 Bacteria 36519
166 Ga0501074_0210887 3300049590 Bacteria 1384
167 Ga0501080_0109039 3300049742 Bacteria 2566
168 Ga0501280_010625 3300049776 Bacteria 1284
169 Ga0501044_0030170 3300049823 Bacteria 5715
170 Ga0501044_0038832 3300049823 Bacteria 4972
171 Ga0501044_0163529 3300049823 Bacteria 2201
172 Ga0501045_0039874 3300049824 Bacteria 3418
173 nmdc:mga03683_17955_c1 3300050489 Bacteria 2684
174 nmdc:mga00v17_191569_c1 3300050491 Bacteria 1321
175 nmdc:mga00v17_201175_c1 3300050491 Bacteria 1288
176 nmdc:mga00v17_205425_c1 3300050491 Bacteria 1274
177 nmdc:mga00v17_32_c1 3300050491 Bacteria 87395
178 nmdc:mga00v17_36_c1 3300050491 Bacteria 85171
179 nmdc:mga0yw44_38822_c1 3300050492 Bacteria 2820
180 nmdc:mga0yw44_51880_c1 3300050492 Bacteria 2485
181 nmdc:mga0yw44_64849_c1 3300050492 Bacteria 2249
182 nmdc:mga0yw44_7724_c1 3300050492 Bacteria 5310
183 nmdc:mga0yw44_80224_c1 3300050492 Bacteria 2043
184 nmdc:mga0k408_238955_c1 3300050493 Bacteria 1085
185 nmdc:mga07m45_42029_c2 3300050496 Bacteria 1130
186 nmdc:mga07m45_47269_c1 3300050496 Bacteria 2419
187 nmdc:mga0sz30_37234_c1 3300050516 Bacteria 2036
188 nmdc:mga0sz30_4892_c1 3300050516 Bacteria 4879
189 Ga0500643_000398 3300053087 Bacteria 33269
190 Ga0500556_0000007 3300053104 Bacteria 331400
191 Ga0500556_0000376 3300053104 Bacteria 32533
192 Ga0500562_000521 3300053108 Bacteria 9319
193 Ga0500593_034164 3300053117 Bacteria 2276
194 Ga0500607_084476 3300053121 Bacteria 1612
195 Ga0500655_004832 3300053133 Bacteria 2422
196 Ga0500559_0000369 3300053136 Bacteria 33076
197 Ga0500561_0000568 3300053137 Bacteria 5952
198 Ga0500568_0000021 3300053139 Bacteria 185406
199 Ga0500568_0000300 3300053139 Bacteria 40139
200 Ga0500568_0000571 3300053139 Bacteria 26959
201 Ga0500573_0001069 3300053140 Bacteria 12676
202 Ga0500604_0037981 3300053151 Bacteria 1442
203 Ga0500616_0000298 3300053153 Bacteria 72155
204 Ga0500616_0000353 3300053153 Bacteria 65536
205 Ga0500616_0058693 3300053153 Bacteria 2001
206 Ga0500620_028911 3300053155 Bacteria 1737
207 Ga0500624_003135 3300053157 Bacteria 2181
208 Ga0500633_0014617 3300053160 Bacteria 2232
209 Ga0500634_0000011 3300053161 Bacteria 133329
210 Ga0500634_0009235 3300053161 Bacteria 4980
211 Ga0500636_0000034 3300053177 Bacteria 72555
212 Ga0500636_0005628 3300053177 Bacteria 7160
213 Ga0530510_0072032 3300061734 Bacteria 2508

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053087 Ga0500643_000398 Ga0500643_000398_27965_28873 298
2 3300044735 Ga0466968_0008137 Ga0466968_0008137_2092_3117 301
3 3300006353 Ga0075370_10090444 Ga0075370_100904442 304
4 3300003559 Ga0007427J51700_106582 Ga0007427J51700_1065821 305
5 3300049571 Ga0501034_0364780 Ga0501034_0364780_165_1193 305
6 3300049574 Ga0501038_0005173 Ga0501038_0005173_8557_9585 305
7 3300049586 Ga0501070_0000473 Ga0501070_0000473_25762_26796 305
8 3300049823 Ga0501044_0038832 Ga0501044_0038832_2192_3208 305
9 3300006038 Ga0075365_10015988 Ga0075365_100159882 306
10 3300006048 Ga0075363_100016212 Ga0075363_1000162124 306
11 3300006051 Ga0075364_10045936 Ga0075364_100459363 306
12 3300006178 Ga0075367_10087310 Ga0075367_100873102 306
13 3300006353 Ga0075370_10048074 Ga0075370_100480742 306
14 3300048925 Ga0496122_0002007 Ga0496122_0002007_6802_7830 306
15 3300048926 Ga0496123_0002580 Ga0496123_0002580_9100_10128 306
16 3300050492 nmdc:mga0yw44_38822_c1 nmdc:mga0yw44_38822_c1_151_1185 306
17 3300050496 nmdc:mga07m45_47269_c1 nmdc:mga07m45_47269_c1_76_1110 306
18 3300031995 Ga0307409_100273619 Ga0307409_1002736191 307
19 3300032002 Ga0307416_100070285 Ga0307416_1000702852 307
20 3300005548 Ga0070665_100070204 Ga0070665_1000702042 308
21 3300006051 Ga0075364_10123128 Ga0075364_101231282 308
22 3300046615 Ga0495656_0045461 Ga0495656_0045461_149_1180 308
23 3300049776 Ga0501280_010625 Ga0501280_010625_17_943 308
24 3300003790 Ga0055528_1000802 Ga0055528_10008029 310
25 3300025299 Ga0209256_1006675 Ga0209256_10066752 310
26 3300048925 Ga0496122_0020529 Ga0496122_0020529_103_1137 310
27 3300048928 Ga0496125_0004665 Ga0496125_0004665_8397_9431 310
28 iso_pu_bacteria 2937071275 2937077861 310
29 3300046471 Ga0495650_0085696 Ga0495650_0085696_137_1174 311
30 3300049568 Ga0501031_0114287 Ga0501031_0114287_578_1615 311
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408 3300048926 Ga0496123_0006828 Ga0496123_0006828_1850_2848 331
409 3300048927 Ga0496124_0000091 Ga0496124_0000091_183593_184591 331
410 3300048927 Ga0496124_0000943 Ga0496124_0000943_42996_44006 331
411 3300048927 Ga0496124_0007535 Ga0496124_0007535_6547_7662 331
412 3300048927 Ga0496124_0021234 Ga0496124_0021234_1629_2639 331
413 3300048927 Ga0496124_0035527 Ga0496124_0035527_2101_3096 331
414 3300048927 Ga0496124_0278396 Ga0496124_0278396_130_1125 331
415 3300048928 Ga0496125_0000107 Ga0496125_0000107_192673_193788 331
416 3300048928 Ga0496125_0039952 Ga0496125_0039952_1749_2759 331
417 3300048929 Ga0496126_0135985 Ga0496126_0135985_370_1368 331
418 3300050489 nmdc:mga03683_17955_c1 nmdc:mga03683_17955_c1_296_1306 331
419 3300050491 nmdc:mga00v17_32_c1 nmdc:mga00v17_32_c1_72853_73863 331
420 3300050492 nmdc:mga0yw44_51880_c1 nmdc:mga0yw44_51880_c1_1392_2402 331
421 3300050493 nmdc:mga0k408_238955_c1 nmdc:mga0k408_238955_c1_20_1030 331
422 3300050496 nmdc:mga07m45_42029_c2 nmdc:mga07m45_42029_c2_78_1088 331
423 3300050516 nmdc:mga0sz30_4892_c1 nmdc:mga0sz30_4892_c1_3096_4106 331
424 3300053137 Ga0500561_0000568 Ga0500561_0000568_1451_2461 331
425 3300053177 Ga0500636_0000034 Ga0500636_0000034_39698_40705 331
426 3300053177 Ga0500636_0005628 Ga0500636_0005628_4812_5819 331
427 iso_pu_bacteria 2513237140 2513883207 331
428 iso_pu_bacteria 2916971899 2916974101 331
429 3300003322 rootL2_10011437 rootL2_100114371 332
430 3300006186 Ga0075369_10011458 Ga0075369_100114582 332
431 3300013307 Ga0157372_10335483 Ga0157372_103354831 332
432 3300025245 Ga0207425_1002054 Ga0207425_10020543 332
433 3300025258 Ga0209129_1003722 Ga0209129_10037227 332
434 3300025258 Ga0209129_1003876 Ga0209129_10038767 332
435 3300025294 Ga0209025_1034854 Ga0209025_10348542 332
436 3300025297 Ga0209758_1000599 Ga0209758_100059926 332
437 3300025297 Ga0209758_1001288 Ga0209758_100128827 332
438 3300025904 Ga0207647_10028607 Ga0207647_100286072 332
439 3300031548 Ga0307408_100052606 Ga0307408_1000526062 332
440 3300032004 Ga0307414_10082870 Ga0307414_100828702 332
441 3300041413 Ga0439465_0031057 Ga0439465_0031057_80_1096 332
442 3300048909 Ga0496106_0000243 Ga0496106_0000243_18343_19359 332
443 3300048919 Ga0496116_0009470 Ga0496116_0009470_2998_4086 332
444 3300048920 Ga0496117_0072700 Ga0496117_0072700_185_1261 332
445 3300048921 Ga0496118_0024567 Ga0496118_0024567_1772_2848 332
446 3300048922 Ga0496119_0050607 Ga0496119_0050607_1221_2297 332
447 3300048923 Ga0496120_0000031 Ga0496120_0000031_101090_102166 332
448 3300048925 Ga0496122_0009718 Ga0496122_0009718_6279_7295 332
449 3300048927 Ga0496124_0194602 Ga0496124_0194602_349_1365 332
450 3300048928 Ga0496125_0018188 Ga0496125_0018188_3622_4638 332
451 3300049580 Ga0501046_0201140 Ga0501046_0201140_42_1058 332
452 3300049581 Ga0501047_0181998 Ga0501047_0181998_871_1887 332
453 3300050492 nmdc:mga0yw44_7724_c1 nmdc:mga0yw44_7724_c1_3254_4255 332
454 3300050516 nmdc:mga0sz30_37234_c1 nmdc:mga0sz30_37234_c1_615_1631 332
455 3300053139 Ga0500568_0000571 Ga0500568_0000571_17493_18509 332
456 3300053151 Ga0500604_0037981 Ga0500604_0037981_162_1178 332
457 3300053155 Ga0500620_028911 Ga0500620_028911_624_1640 332
458 3300053160 Ga0500633_0014617 Ga0500633_0014617_23_1039 332
459 iso_pu_bacteria 2818991441 2819569883 332
460 3300048924 Ga0496121_0000015 Ga0496121_0000015_560491_561522 333
461 3300046453 Ga0495627_009670 Ga0495627_009670_1567_2598 334
462 3300002774 JGI25150J39212_1000092 JGI25150J39212_100009226 335
463 3300003187 JGI25151J46595_10000007 JGI25151J46595_1000000722 335
464 3300009036 Ga0105244_10087250 Ga0105244_100872502 335
465 3300025245 Ga0207425_1000018 Ga0207425_1000018308 335
466 3300025258 Ga0209129_1000026 Ga0209129_100002621 335
467 3300025294 Ga0209025_1000035 Ga0209025_100003521 335
468 3300025297 Ga0209758_1000040 Ga0209758_100004021 335
469 3300031911 Ga0307412_10013081 Ga0307412_100130812 335
470 3300048904 Ga0496101_0032013 Ga0496101_0032013_2237_3244 335
471 3300048919 Ga0496116_0007270 Ga0496116_0007270_7022_8029 335
472 3300048920 Ga0496117_0021668 Ga0496117_0021668_3359_4366 335
473 3300048921 Ga0496118_0008267 Ga0496118_0008267_4471_5478 335
474 3300048922 Ga0496119_0027907 Ga0496119_0027907_1972_2979 335
475 3300048923 Ga0496120_0052665 Ga0496120_0052665_360_1367 335
476 3300048924 Ga0496121_0018670 Ga0496121_0018670_407_1414 335
477 3300048925 Ga0496122_0008286 Ga0496122_0008286_2095_3102 335
478 3300048927 Ga0496124_0013905 Ga0496124_0013905_535_1542 335
479 3300048928 Ga0496125_0032928 Ga0496125_0032928_2649_3656 335

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01497

Peripla_BP_2

Periplasmic binding protein

91

340

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hmq-assembly1.cif.gz_A crystal structure of streptococcus pneumoniae tigr4 piaa in complex with ferrichrome 0.9613 37 335
4hmp-assembly1.cif.gz_A crystal structure of iron uptake abc transporter substrate-binding protein piaa from streptococcus pneumoniae tigr4 0.9505 37 333
4hmp-assembly2.cif.gz_B crystal structure of iron uptake abc transporter substrate-binding protein piaa from streptococcus pneumoniae tigr4 0.947 37 333
4hmq-assembly1.cif.gz_A crystal structure of streptococcus pneumoniae tigr4 piaa in complex with ferrichrome 0.9458 37 335
4hmp-assembly1.cif.gz_A crystal structure of iron uptake abc transporter substrate-binding protein piaa from streptococcus pneumoniae tigr4 0.9441 37 333
ID Description Score Start End Superfamily
4hmpB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9694 37 171 3.40.50.1980
4hmpB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9545 37 171 3.40.50.1980
4hmpB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9028 175 333 3.40.50.1980
4hmpB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8866 175 333 3.40.50.1980
4mdyA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8583 36 174 3.40.50.1980
ID Description Score Start End GO Terms
AF-A0A6G3XUK5-F1-model_v4 ABC transporter substrate-binding protein 1.002 51 149 GO:0030288
GO:1901678
AF-A0A6G3XUK5-F1-model_v4 ABC transporter substrate-binding protein 0.9924 51 149 GO:0030288
GO:1901678
AF-A0A2E6WZR4-F1-model_v4 ABC transporter substrate-binding protein 0.9881 34 335 GO:0030288
GO:1901678
AF-A0A5S4GRV5-F1-model_v4 Iron-siderophore ABC transporter substrate-binding protein 0.987 37 335 GO:0030288
GO:1901678
AF-A0A6G3CZN8-F1-model_v4 ABC transporter substrate-binding protein 0.9811 73 335 GO:0030288
GO:1901678

Feature Viewer

pLDDT pTM Quality
90.23 0.86 High
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Predicted Structure (AlphaFold2)

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