F449588

General Info

Members Datasets Scaffolds Average Seq Length
465 224 354 499

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842482326|2842489075
Length 542
Sequence FGRSLAKGEIDQFVRIWRYGLFRAKLEPSERLSAAKSPMTLALLGDPIVQFCILVVIGTFVSRIMLRHQRAGRLIGQLIFFTSLTVLLLYHGIIPYEPSPPENSVTLRTFTGVAKIIWWVNGAWVLIAFVRLFLIFERKPREGRLLQDLIVGIIYLGAILSIVGDVFSVPIGTLIATSGVFAIILGLALQSTLSDVFSGIALNLGRPYSVGDWIVLDNDIQGRVVETNWRATQLLSGTNDLVVIPNSVLAKTRLTNLSSPDESHGINVTVRIQPTTQPRIVADLMQNVLISCNSIEKTPEPSVSINSIDGQAIELQLSCRVRDISQATVAKNEIFDLLYRHSKAAGLKLAGPPGTITLPAEHKTEPSGEQQHAPSTPWRLLSNIPLFSSLTEDEKEHLASHMQRRTYRKDAIIAEQDAKLRALTIVRSGVVSITRREGHRQIELTRLAPGDYFGENGLLMGTGEVGTVRALTFVVIYEIGEDCLSPLLHDRPALAEELGAIMAKRIEAERHLFANSNMLVNGAPASSLTSRIKHLFQLQQHD

Samples

Sample ID Description Type Environment
1 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
2 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
3 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
4 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
5 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
6 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
7 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
8 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
9 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
10 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
11 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
12 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
13 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
14 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
15 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
16 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
17 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
18 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
19 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
20 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
21 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
22 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
23 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
24 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
25 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
26 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
27 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
28 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
29 2643221599 Rhizobium sp. Root708 Isolate Unclassified
30 2643221618 Ensifer sp. Root231 Isolate Unclassified
31 2643221626 Ensifer sp. Root31 Isolate Unclassified
32 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
33 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
34 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
35 2643221655 Ensifer sp. Root1252 Isolate Unclassified
36 2643221659 Ensifer sp. Root127 Isolate Unclassified
37 2643221698 Ensifer sp. Root142 Isolate Unclassified
38 2643221712 Ensifer sp. Root258 Isolate Unclassified
39 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
40 2738541293 Rhizobium sp. GV031 Isolate Unclassified
41 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
42 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
43 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
44 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
45 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
46 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
47 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
48 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
49 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
50 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
51 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
52 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
53 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
54 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
55 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
56 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
57 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
58 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
59 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
60 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
61 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
62 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
63 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
64 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
65 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
66 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
67 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
68 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
69 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
70 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
71 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
72 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
73 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
74 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
75 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
76 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
77 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
78 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
79 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
80 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
81 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
82 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
83 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
84 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
85 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
86 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
87 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
88 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
89 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
90 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
91 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
92 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
93 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
94 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
95 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
96 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
97 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
98 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
99 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
100 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
101 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
102 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
103 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
104 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
105 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
106 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
107 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
108 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
109 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
110 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
111 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
112 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
113 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
114 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
115 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
116 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
117 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
118 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
119 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
120 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
121 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
122 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
123 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
124 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
125 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
126 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
128 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
129 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
130 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
131 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
132 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
134 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
135 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
136 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
137 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
138 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
139 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
148 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
150 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
151 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
152 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
153 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
154 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
155 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
156 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
157 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
158 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
159 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
160 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
161 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
162 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
163 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
164 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
165 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
166 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
167 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
168 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
169 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
170 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
171 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
172 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
173 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
174 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
175 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
176 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
177 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
178 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
179 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
180 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
181 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
182 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
183 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
184 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
185 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
186 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
187 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
188 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
189 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
190 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
191 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
192 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
193 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
194 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
195 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
196 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
197 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
198 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
199 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
200 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
203 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
204 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
205 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
206 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
207 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
208 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
209 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
210 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
211 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
212 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
213 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
214 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
215 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
216 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
217 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
218 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
219 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
220 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
221 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
222 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
223 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
224 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 76.34
Metatranscriptomes 0
Isolates 23.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 30.32
Nodule 7.31
Rhizoplane 5.16
Rhizosphere 27.31
Stem 0
Stem Tuber 0
Unclassified 29.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000386 3300001979 Bacteria 18894
2 JGI24740J21852_10000461 3300001979 Bacteria 17435
3 JGI24740J21852_10002104 3300001979 Bacteria 9106
4 JGI25155J39150_1000012 3300002704 Bacteria 199435
5 JGI25156J39149_1000049 3300002705 Bacteria 91988
6 JGI25162J39368_1000277 3300002737 Bacteria 48696
7 JGI25162J39368_1001144 3300002737 Bacteria 15884
8 JGI25162J39368_1001842 3300002737 Bacteria 9859
9 JGI25154J39366_1000033 3300002738 Bacteria 184379
10 JGI25157J39369_1000055 3300002741 Bacteria 107875
11 JGI25152J39213_1000133 3300002773 Bacteria 50447
12 JGI25152J39213_1000150 3300002773 Bacteria 47719
13 JGI25152J39213_1000268 3300002773 Bacteria 34927
14 JGI25152J39213_1000525 3300002773 Bacteria 21286
15 JGI25152J39213_1000546 3300002773 Bacteria 20714
16 JGI25152J39213_1005536 3300002773 Bacteria 3649
17 JGI25150J39212_1000097 3300002774 Bacteria 50447
18 JGI25150J39212_1000115 3300002774 Bacteria 45489
19 JGI25150J39212_1003453 3300002774 Bacteria 3693
20 JGI25159J45721_1000265 3300002987 Bacteria 24451
21 JGI25151J46595_10000334 3300003187 Bacteria 50447
22 JGI25151J46595_10000391 3300003187 Bacteria 45489
23 JGI25151J46595_10001808 3300003187 Bacteria 13813
24 JGI25151J46595_10003368 3300003187 Bacteria 8851
25 JGI25165J46597_1000863 3300003214 Bacteria 21710
26 JGI25165J46597_1001099 3300003214 Bacteria 17242
27 JGI25165J46597_1001187 3300003214 Bacteria 15884
28 JGI25165J46597_1005527 3300003214 Bacteria 2416
29 JGI25153J46596_10000339 3300003215 Bacteria 33448
30 JGI25153J46596_10001042 3300003215 Bacteria 16916
31 JGI25153J46596_10001526 3300003215 Bacteria 13766
32 JGI25153J46596_10003874 3300003215 Bacteria 8228
33 JGI25153J46596_10008633 3300003215 Bacteria 4849
34 rootH1_10111598 3300003316 Bacteria 8056
35 rootH2_10025690 3300003320 Bacteria 8497
36 rootL2_10019044 3300003322 Bacteria 17479
37 rootL2_10022516 3300003322 Bacteria 12660
38 rootL2_10335848 3300003322 Bacteria 2681
39 rootH1_10041192 3300003316 Bacteria 1521
40 rootH1_10041192 3300003323 Bacteria 2081
41 rootH1_10041504 3300003323 Bacteria 3704
42 JGI25160J50197_1000006 3300003354 Bacteria 316247
43 JGI25161J50226_1000004 3300003374 Bacteria 316212
44 Ga0055526_1000818 3300003771 Bacteria 23230
45 Ga0055526_1002411 3300003771 Bacteria 12660
46 Ga0055526_1002570 3300003771 Bacteria 12167
47 Ga0055526_1004266 3300003771 Bacteria 8658
48 Ga0055526_1010518 3300003771 Bacteria 4290
49 Ga0055526_1019555 3300003771 Bacteria 2463
50 Ga0055526_1020142 3300003771 Bacteria 2391
51 Ga0055524_1000504 3300003775 Bacteria 30479
52 Ga0055524_1003170 3300003775 Bacteria 8091
53 Ga0055524_1007270 3300003775 Bacteria 4726
54 Ga0055524_1013189 3300003775 Plasmid 3130
55 Ga0055524_1024371 3300003775 Bacteria 1921
56 Ga0055528_1000035 3300003790 Bacteria 117498
57 Ga0055528_1000039 3300003790 Bacteria 112899
58 Ga0055528_1000608 3300003790 Bacteria 26825
59 Ga0055528_1000829 3300003790 Bacteria 21189
60 Ga0055531_10001927 3300003794 Bacteria 14513
61 Ga0058692_1000224 3300003856 Bacteria 33192
62 Ga0055543_1000002 3300004625 Bacteria 390020
63 Ga0065165_1000341 3300005262 Bacteria 76483
64 Ga0065165_1014742 3300005262 Bacteria 3019
65 Ga0070670_100000759 3300005331 Bacteria 25045
66 Ga0070698_100000768 3300005471 Bacteria 34727
67 Ga0070697_100170486 3300005536 Unclassified 1842
68 Ga0070665_100084378 3300005548 Bacteria 3182
69 Ga0068856_100003623 3300005614 Bacteria 15510
70 Ga0068856_100018296 3300005614 Bacteria 6793
71 Ga0068856_100078120 3300005614 Bacteria 3281
72 Ga0081455_10037568 3300005937 Bacteria 4297
73 Ga0081539_10000992 3300005985 Bacteria 52704
74 Ga0070712_100079307 3300006175 Bacteria 2373
75 Ga0075367_10011575 3300006178 Bacteria 4675
76 Ga0075367_10109026 3300006178 Bacteria 1698
77 Ga0099826_10000063 3300006948 Bacteria 61637
78 Ga0105240_10000019 3300009093 Bacteria 406211
79 Ga0105240_10000440 3300009093 Bacteria 76796
80 Ga0105248_10333650 3300009177 Bacteria 1708
81 Ga0105237_10001024 3300009545 Bacteria 37600
82 Ga0105237_10002268 3300009545 Bacteria 23929
83 Ga0105238_10238565 3300009551 Bacteria 1795
84 Ga0123342_1000436 3300009766 Bacteria 65465
85 Ga0105239_10103455 3300010375 Bacteria 3151
86 Ga0157370_10001984 3300013104 Bacteria 25148
87 Ga0157370_10003953 3300013104 Bacteria 17255
88 Ga0182007_10005672 3300015262 Bacteria 5449
89 Ga0182005_1004348 3300015265 Plasmid 4602
90 Ga0213872_10014337 3300021361 Bacteria 3699
91 Ga0209435_100005 3300025206 Bacteria 573745
92 Ga0209436_100060 3300025208 Bacteria 60450
93 Ga0209437_100078 3300025233 Bacteria 278088
94 Ga0209437_100606 3300025233 Bacteria 22247
95 Ga0209437_100755 3300025233 Bacteria 15682
96 Ga0209437_101626 3300025233 Bacteria 5133
97 Ga0209437_106489 3300025233 Bacteria 1946
98 Ga0209437_106923 3300025233 Bacteria 1869
99 Ga0207425_1000186 3300025245 Bacteria 50590
100 Ga0207425_1000217 3300025245 Bacteria 45693
101 Ga0207425_1000324 3300025245 Bacteria 34065
102 Ga0207425_1007402 3300025245 Bacteria 2899
103 Ga0207425_1008732 3300025245 Bacteria 2568
104 Ga0209646_1000011 3300025246 Bacteria 573745
105 Ga0209026_1000008 3300025250 Bacteria 573745
106 Ga0209677_101160 3300025253 Bacteria 12213
107 Ga0209677_102228 3300025253 Bacteria 7515
108 Ga0209677_105811 3300025253 Bacteria 3108
109 Ga0209759_1000004 3300025256 Bacteria 573745
110 Ga0209129_1000153 3300025258 Bacteria 110699
111 Ga0209129_1000165 3300025258 Bacteria 98917
112 Ga0209129_1000250 3300025258 Bacteria 56427
113 Ga0209129_1000257 3300025258 Bacteria 54146
114 Ga0209129_1000339 3300025258 Bacteria 40301
115 Ga0209129_1002286 3300025258 Bacteria 9543
116 Ga0209129_1008079 3300025258 Unclassified 2992
117 Ga0209233_1000139 3300025261 Bacteria 197070
118 Ga0209233_1000163 3300025261 Bacteria 152912
119 Ga0209233_1000521 3300025261 Bacteria 22247
120 Ga0209233_1000689 3300025261 Bacteria 15982
121 Ga0209233_1000698 3300025261 Bacteria 15865
122 Ga0209673_1000023 3300025273 Bacteria 411385
123 Ga0209673_1000161 3300025273 Bacteria 142073
124 Ga0209673_1000220 3300025273 Bacteria 113086
125 Ga0209673_1000285 3300025273 Bacteria 94731
126 Ga0209673_1002923 3300025273 Bacteria 10769
127 Ga0209673_1004181 3300025273 Bacteria 7882
128 Ga0209673_1005463 3300025273 Bacteria 6375
129 Ga0209673_1008538 3300025273 Bacteria 4548
130 Ga0209130_1000015 3300025284 Bacteria 409631
131 Ga0209130_1000032 3300025284 Bacteria 316240
132 Ga0209130_1011887 3300025284 Bacteria 2308
133 Ga0209676_1001755 3300025292 Bacteria 18413
134 Ga0209025_1000172 3300025294 Bacteria 160407
135 Ga0209025_1000362 3300025294 Bacteria 96826
136 Ga0209025_1000975 3300025294 Bacteria 42899
137 Ga0209025_1001302 3300025294 Bacteria 34065
138 Ga0209025_1004684 3300025294 Bacteria 11676
139 Ga0209564_1000450 3300025295 Bacteria 69909
140 Ga0209564_1000955 3300025295 Bacteria 36777
141 Ga0209564_1000984 3300025295 Bacteria 35737
142 Ga0209564_1001633 3300025295 Bacteria 21709
143 Ga0209564_1006042 3300025295 Bacteria 6670
144 Ga0209564_1007689 3300025295 Bacteria 5494
145 Ga0209564_1020078 3300025295 Bacteria 2466
146 Ga0209758_1000148 3300025297 Bacteria 166232
147 Ga0209758_1000153 3300025297 Bacteria 161668
148 Ga0209758_1000542 3300025297 Bacteria 59932
149 Ga0209758_1000685 3300025297 Bacteria 50499
150 Ga0209758_1000738 3300025297 Bacteria 47745
151 Ga0209758_1003599 3300025297 Bacteria 13864
152 Ga0209758_1004992 3300025297 Bacteria 10600
153 Ga0209758_1005406 3300025297 Bacteria 9868
154 Ga0209256_1000341 3300025299 Bacteria 76526
155 Ga0209256_1001060 3300025299 Bacteria 31896
156 Ga0209256_1001675 3300025299 Bacteria 21488
157 Ga0209256_1004008 3300025299 Bacteria 9638
158 Ga0209256_1006659 3300025299 Bacteria 6008
159 Ga0209256_1007909 3300025299 Bacteria 5082
160 Ga0207426_1000077 3300025302 Bacteria 316246
161 Ga0207426_1000122 3300025302 Bacteria 218307
162 Ga0207426_1000390 3300025302 Bacteria 74933
163 Ga0207426_1002453 3300025302 Bacteria 11815
164 Ga0209051_1003796 3300025303 Bacteria 9670
165 Ga0209051_1003966 3300025303 Bacteria 9418
166 Ga0209051_1006554 3300025303 Bacteria 6536
167 Ga0209051_1015387 3300025303 Bacteria 3519
168 Ga0209257_1002464 3300025304 Bacteria 18316
169 Ga0209257_1023033 3300025304 Bacteria 2203
170 Ga0207684_10103331 3300025910 Bacteria 2436
171 Ga0207695_10000049 3300025913 Bacteria 406233
172 Ga0207695_10000180 3300025913 Bacteria 185504
173 Ga0207671_10000132 3300025914 Bacteria 115312
174 Ga0207671_10000556 3300025914 Bacteria 50250
175 Ga0207650_10000777 3300025925 Bacteria 24562
176 Ga0207640_10036816 3300025981 Bacteria 3075
177 Ga0207678_10090720 3300026067 Bacteria 2612
178 Ga0207702_10013320 3300026078 Bacteria 6840
179 Ga0207702_10044867 3300026078 Bacteria 3717
180 Ga0207702_10131115 3300026078 Unclassified 2256
181 Ga0209371_1000064 3300027312 Bacteria 218637
182 Ga0209371_1001194 3300027312 Bacteria 18810
183 Ga0268264_10201861 3300028381 Bacteria 1820
184 Ga0268256_1000028 3300030500 Bacteria 433179
185 Ga0268256_1001399 3300030500 Bacteria 14632
186 Ga0307513_10029239 3300031456 Bacteria 6286
187 Ga0307406_10063145 3300031901 Bacteria 2398
188 Ga0307412_10009312 3300031911 Bacteria 5630
189 Ga0436361_0417882 3300039447 Bacteria 6057
190 Ga0439465_0016816 3300041413 Bacteria 2283
191 Ga0466966_0067093 3300044684 Bacteria 2254
192 Ga0466963_0015998 3300044694 Bacteria 4657
193 Ga0466970_0001656 3300044765 Bacteria 10695
194 Ga0466967_0113502 3300045976 Bacteria 2493
195 Ga0495590_0013448 3300046457 Bacteria 3008
196 Ga0495590_0030321 3300046457 Unclassified 1895
197 Ga0495607_0069537 3300046501 Bacteria 1970
198 Ga0495606_0002214 3300046507 Bacteria 23254
199 Ga0495610_0001808 3300046512 Bacteria 18583
200 Ga0495610_0043458 3300046512 Bacteria 2238
201 Ga0495620_0001106 3300046515 Bacteria 16469
202 Ga0495620_0018909 3300046515 Bacteria 3403
203 Ga0495632_0000703 3300046519 Bacteria 30486
204 Ga0495632_0000923 3300046519 Bacteria 25767
205 Ga0495632_0003755 3300046519 Bacteria 10623
206 Ga0495632_0024462 3300046519 Bacteria 3207
207 Ga0495643_0015369 3300046522 Bacteria 4524
208 Ga0495643_0037156 3300046522 Bacteria 2673
209 Ga0495654_0000080 3300046530 Bacteria 109402
210 Ga0495597_0022721 3300046542 Bacteria 2907
211 Ga0495622_0018358 3300046557 Bacteria 3257
212 Ga0495625_0012950 3300046660 Bacteria 6731
213 Ga0495625_0053153 3300046660 Bacteria 2898
214 Ga0495661_0094922 3300046665 Bacteria 1690
215 Ga0495588_0044640 3300046674 Bacteria 2271
216 Ga0495588_0055261 3300046674 Bacteria 2049
217 Ga0495649_0044547 3300046694 Bacteria 2422
218 Ga0495649_0048329 3300046694 Bacteria 2312
219 Ga0495660_0040596 3300046810 Bacteria 2578
220 Ga0495604_0002788 3300047317 Bacteria 14017
221 Ga0495604_0006032 3300047317 Bacteria 9615
222 Ga0495687_000185 3300047443 Bacteria 91064
223 Ga0495687_036080 3300047443 Bacteria 2215
224 Ga0495686_0000877 3300047472 Bacteria 38321
225 Ga0495686_0002808 3300047472 Bacteria 15793
226 Ga0495686_0005161 3300047472 Bacteria 10403
227 Ga0495686_0007765 3300047472 Bacteria 7987
228 Ga0495686_0045305 3300047472 Bacteria 2783
229 Ga0496100_0015677 3300048903 Bacteria 4429
230 Ga0496101_0037490 3300048904 Bacteria 3439
231 Ga0496102_0001449 3300048905 Bacteria 21013
232 Ga0496102_0044047 3300048905 Bacteria 4048
233 Ga0496103_0002163 3300048906 Bacteria 12495
234 Ga0496103_0019166 3300048906 Bacteria 4108
235 Ga0496104_0060889 3300048907 Bacteria 3576
236 Ga0496105_0002347 3300048908 Bacteria 13715
237 Ga0496105_0006178 3300048908 Bacteria 9186
238 Ga0496105_0012327 3300048908 Bacteria 6769
239 Ga0496105_0040523 3300048908 Bacteria 3841
240 Ga0496106_0002048 3300048909 Bacteria 15151
241 Ga0496106_0105147 3300048909 Bacteria 2193
242 Ga0496107_0007882 3300048910 Bacteria 7352
243 Ga0496108_0025356 3300048911 Bacteria 4886
244 Ga0496110_0056738 3300048913 Plasmid 3447
245 Ga0496110_0127640 3300048913 Bacteria 2295
246 Ga0496111_0059167 3300048914 Bacteria 2776
247 Ga0496112_0059809 3300048915 Bacteria 3754
248 Ga0496113_0061191 3300048916 Bacteria 2840
249 Ga0496113_0087920 3300048916 Bacteria 2390
250 Ga0496116_0000952 3300048919 Bacteria 35680
251 Ga0496116_0001349 3300048919 Bacteria 27891
252 Ga0496116_0001456 3300048919 Bacteria 26528
253 Ga0496116_0002552 3300048919 Bacteria 19027
254 Ga0496116_0002820 3300048919 Bacteria 17844
255 Ga0496116_0003027 3300048919 Bacteria 17024
256 Ga0496116_0011592 3300048919 Bacteria 7276
257 Ga0496116_0033365 3300048919 Bacteria 3654
258 Ga0496116_0035921 3300048919 Bacteria 3476
259 Ga0496116_0036629 3300048919 Bacteria 3430
260 Ga0496116_0102249 3300048919 Unclassified 1709
261 Ga0496117_0000657 3300048920 Bacteria 55296
262 Ga0496117_0003219 3300048920 Bacteria 19285
263 Ga0496117_0003408 3300048920 Bacteria 18511
264 Ga0496117_0019073 3300048920 Bacteria 5651
265 Ga0496117_0024427 3300048920 Bacteria 4782
266 Ga0496117_0059383 3300048920 Bacteria 2642
267 Ga0496117_0110574 3300048920 Bacteria 1713
268 Ga0496118_0003752 3300048921 Bacteria 18777
269 Ga0496118_0003830 3300048921 Bacteria 18511
270 Ga0496118_0006505 3300048921 Bacteria 12808
271 Ga0496118_0009888 3300048921 Bacteria 9538
272 Ga0496118_0042233 3300048921 Bacteria 3600
273 Ga0496119_0003134 3300048922 Bacteria 17419
274 Ga0496119_0004615 3300048922 Bacteria 13601
275 Ga0496119_0005872 3300048922 Bacteria 11585
276 Ga0496119_0015527 3300048922 Bacteria 5854
277 Ga0496119_0026372 3300048922 Bacteria 4030
278 Ga0496119_0027436 3300048922 Bacteria 3912
279 Ga0496121_0001349 3300048924 Bacteria 41966
280 Ga0496121_0003008 3300048924 Bacteria 24483
281 Ga0496121_0007920 3300048924 Bacteria 12705
282 Ga0496121_0009497 3300048924 Bacteria 11159
283 Ga0496121_0019289 3300048924 Bacteria 6825
284 Ga0496121_0024065 3300048924 Bacteria 5835
285 Ga0496121_0031635 3300048924 Unclassified 4829
286 Ga0496121_0031667 3300048924 Plasmid 4827
287 Ga0496121_0049209 3300048924 Bacteria 3577
288 Ga0496121_0064674 3300048924 Bacteria 2981
289 Ga0496121_0074772 3300048924 Bacteria 2708
290 Ga0496122_0003740 3300048925 Bacteria 19629
291 Ga0496122_0005406 3300048925 Bacteria 15240
292 Ga0496122_0005881 3300048925 Bacteria 14364
293 Ga0496122_0006092 3300048925 Bacteria 14048
294 Ga0496122_0006661 3300048925 Bacteria 13165
295 Ga0496122_0009404 3300048925 Bacteria 10311
296 Ga0496122_0011912 3300048925 Bacteria 8732
297 Ga0496122_0012629 3300048925 Bacteria 8376
298 Ga0496122_0013829 3300048925 Bacteria 7859
299 Ga0496122_0022633 3300048925 Bacteria 5578
300 Ga0496122_0032369 3300048925 Bacteria 4326
301 Ga0496122_0051700 3300048925 Bacteria 3119
302 Ga0496122_0053309 3300048925 Unclassified 3050
303 Ga0496123_0005003 3300048926 Bacteria 13569
304 Ga0496123_0005150 3300048926 Bacteria 13310
305 Ga0496123_0005454 3300048926 Bacteria 12805
306 Ga0496123_0006458 3300048926 Bacteria 11346
307 Ga0496123_0010409 3300048926 Bacteria 8222
308 Ga0496123_0016816 3300048926 Bacteria 5914
309 Ga0496123_0017689 3300048926 Bacteria 5717
310 Ga0496123_0018165 3300048926 Bacteria 5612
311 Ga0496123_0028845 3300048926 Bacteria 4099
312 Ga0496123_0033709 3300048926 Bacteria 3679
313 Ga0496123_0070624 3300048926 Bacteria 2184
314 Ga0496124_0000023 3300048927 Bacteria 415226
315 Ga0496124_0000254 3300048927 Bacteria 103551
316 Ga0496124_0001503 3300048927 Bacteria 34105
317 Ga0496124_0004660 3300048927 Bacteria 15865
318 Ga0496124_0008191 3300048927 Bacteria 10963
319 Ga0496124_0009723 3300048927 Bacteria 9843
320 Ga0496124_0016683 3300048927 Bacteria 6969
321 Ga0496124_0032690 3300048927 Bacteria 4588
322 Ga0496124_0061779 3300048927 Bacteria 3138
323 Ga0496124_0064560 3300048927 Bacteria 3055
324 Ga0496125_0005596 3300048928 Bacteria 13875
325 Ga0496125_0006784 3300048928 Bacteria 12293
326 Ga0496125_0007868 3300048928 Bacteria 11261
327 Ga0496125_0035189 3300048928 Bacteria 4400
328 Ga0496125_0036100 3300048928 Bacteria 4322
329 Ga0496125_0044381 3300048928 Bacteria 3760
330 Ga0496125_0070120 3300048928 Bacteria 2746
331 Ga0496125_0078332 3300048928 Bacteria 2541
332 Ga0496125_0118484 3300048928 Bacteria 1896
333 Ga0496126_0004041 3300048929 Bacteria 17850
334 Ga0496126_0033647 3300048929 Bacteria 4820
335 Ga0496126_0047391 3300048929 Bacteria 3934
336 Ga0496126_0205818 3300048929 Unclassified 1659
337 Ga0501032_0010228 3300049569 Bacteria 6770
338 Ga0501034_0105166 3300049571 Bacteria 2816
339 Ga0501067_0022696 3300049583 Bacteria 3473
340 nmdc:mga06z11_8615_c1 3300050494 Unclassified 4264
341 nmdc:mga0sz30_6918_c1 3300050516 Bacteria 4235
342 Ga0500644_0010431 3300053088 Bacteria 2516
343 Ga0500556_0000036 3300053104 Bacteria 144864
344 Ga0500618_002903 3300053125 Bacteria 6142
345 Ga0500618_004804 3300053125 Bacteria 4228
346 Ga0500568_0001485 3300053139 Bacteria 14998
347 Ga0500573_0004725 3300053140 Bacteria 7215
348 Ga0500577_0012444 3300053142 Bacteria 2574
349 Ga0500590_002352 3300053148 Bacteria 8330
350 Ga0500616_0044388 3300053153 Bacteria 2372
351 Ga0500622_0000618 3300053156 Bacteria 32174
352 Ga0500622_0020387 3300053156 Bacteria 3521
353 Ga0500633_0016564 3300053160 Bacteria 2142
354 Ga0501082_0032412 3300060353 Bacteria 4507

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026067 Ga0207678_10090720 Ga0207678_100907202 376
2 3300046501 Ga0495607_0069537 Ga0495607_0069537_30_1313 413
3 3300046512 Ga0495610_0043458 Ga0495610_0043458_955_2208 413
4 3300003323 rootH1_10041504 rootH1_100415043 445
5 3300046557 Ga0495622_0018358 Ga0495622_0018358_131_1474 446
6 3300003322 rootL2_10335848 rootL2_103358483 451
7 3300021361 Ga0213872_10014337 Ga0213872_100143375 451
8 3300039447 Ga0436361_0417882 Ga0436361_0417882_2600_3973 451
9 3300048925 Ga0496122_0011912 Ga0496122_0011912_2255_3625 452
10 3300048926 Ga0496123_0070624 Ga0496123_0070624_572_1942 452
11 iso_pu_bacteria 2929138655 2929143344 454
12 3300048929 Ga0496126_0205818 Ga0496126_0205818_149_1597 459
13 iso_pu_bacteria 2643221599 2644006915 459
14 3300048919 Ga0496116_0001456 Ga0496116_0001456_9075_10553 467
15 3300048926 Ga0496123_0016816 Ga0496123_0016816_4212_5690 467
16 iso_pu_bacteria 2617270742 2617383162 475
17 iso_pu_bacteria 2874168670 2874174294 475
18 iso_pu_bacteria 2818991461 2819688870 479
19 3300002773 JGI25152J39213_1005536 JGI25152J39213_10055362 480
20 3300002774 JGI25150J39212_1003453 JGI25150J39212_10034532 480
21 3300003187 JGI25151J46595_10001808 JGI25151J46595_100018082 480
22 3300003215 JGI25153J46596_10001526 JGI25153J46596_1000152612 480
23 3300005536 Ga0070697_100170486 Ga0070697_1001704862 480
24 3300025245 Ga0207425_1000324 Ga0207425_100032429 480
25 3300025258 Ga0209129_1000339 Ga0209129_100033917 480
26 3300025294 Ga0209025_1001302 Ga0209025_100130229 480
27 3300025297 Ga0209758_1003599 Ga0209758_100359911 480
28 3300048920 Ga0496117_0024427 Ga0496117_0024427_249_1760 480
29 3300048924 Ga0496121_0007920 Ga0496121_0007920_11094_12605 480
30 3300048925 Ga0496122_0006661 Ga0496122_0006661_590_2101 480
31 3300048926 Ga0496123_0033709 Ga0496123_0033709_531_2042 480
32 3300048928 Ga0496125_0036100 Ga0496125_0036100_582_2093 480
33 iso_pu_bacteria 2667528174 2671116516 480
34 iso_pu_bacteria 2510917028 2511182075 482
35 iso_pu_bacteria 2513237088 2513598903 482
36 iso_pu_bacteria 2582581867 2585401408 482
37 iso_pu_bacteria 2923556063 2923562730 482
38 iso_pu_bacteria 8005484373 8005486873 482
39 iso_pu_bacteria 8005542996 8005544682 482
40 3300046519 Ga0495632_0024462 Ga0495632_0024462_1725_3176 483
41 3300046674 Ga0495588_0044640 Ga0495588_0044640_39_1532 483
42 3300048908 Ga0496105_0040523 Ga0496105_0040523_141_1613 483
43 iso_pu_bacteria 2643221636 2644202947 483
44 3300001979 JGI24740J21852_10000461 JGI24740J21852_1000046111 484
45 3300002737 JGI25162J39368_1001144 JGI25162J39368_10011449 484
46 3300003214 JGI25165J46597_1001187 JGI25165J46597_10011874 484
47 3300005614 Ga0068856_100003623 Ga0068856_1000036237 484
48 3300025233 Ga0209437_100755 Ga0209437_1007559 484
49 3300025261 Ga0209233_1000689 Ga0209233_10006895 484
50 3300026078 Ga0207702_10044867 Ga0207702_100448672 484
51 3300048922 Ga0496119_0004615 Ga0496119_0004615_5482_6972 484
52 3300048925 Ga0496122_0006092 Ga0496122_0006092_1482_2972 484
53 iso_pu_bacteria 2599185210 2599606362 484
54 3300025910 Ga0207684_10103331 Ga0207684_101033312 485
55 3300006178 Ga0075367_10011575 Ga0075367_100115754 486
56 3300009766 Ga0123342_1000436 Ga0123342_100043612 486
57 3300046515 Ga0495620_0001106 Ga0495620_0001106_955_2436 486
58 3300046519 Ga0495632_0000703 Ga0495632_0000703_18675_20177 486
59 iso_pu_bacteria 2643221618 2644106728 486
60 iso_pu_bacteria 2643221626 2644148079 486
61 iso_pu_bacteria 2643221655 2644310032 486
62 iso_pu_bacteria 2643221659 2644331981 486
63 iso_pu_bacteria 2643221698 2644543898 486
64 iso_pu_bacteria 2643221712 2644616250 486
65 3300005471 Ga0070698_100000768 Ga0070698_10000076835 487
66 3300025273 Ga0209673_1005463 Ga0209673_10054633 487
67 3300025299 Ga0209256_1006659 Ga0209256_10066595 487
68 3300048919 Ga0496116_0002552 Ga0496116_0002552_16544_18019 487
69 3300048919 Ga0496116_0102249 Ga0496116_0102249_20_1504 487
70 3300048920 Ga0496117_0000657 Ga0496117_0000657_27279_28754 487
71 3300048924 Ga0496121_0001349 Ga0496121_0001349_20442_21914 487
72 3300048924 Ga0496121_0019289 Ga0496121_0019289_2429_3904 487
73 3300048925 Ga0496122_0009404 Ga0496122_0009404_6999_8471 487
74 3300048926 Ga0496123_0005454 Ga0496123_0005454_8496_9968 487
75 3300048927 Ga0496124_0001503 Ga0496124_0001503_31706_33178 487
76 3300048927 Ga0496124_0004660 Ga0496124_0004660_1400_2875 487
77 3300048927 Ga0496124_0016683 Ga0496124_0016683_2034_3518 487
78 3300048928 Ga0496125_0078332 Ga0496125_0078332_453_1928 487
79 3300053104 Ga0500556_0000036 Ga0500556_0000036_74283_75752 487
80 3300053153 Ga0500616_0044388 Ga0500616_0044388_827_2296 487
81 iso_pu_bacteria 2513237138 2513867311 487
82 iso_pu_bacteria 8018150411 8018155559 487
83 3300003856 Ga0058692_1000224 Ga0058692_100022417 488
84 3300027312 Ga0209371_1000064 Ga0209371_1000064202 488
85 3300030500 Ga0268256_1000028 Ga0268256_1000028362 488
86 iso_pu_bacteria 2534681796 2535516382 488
87 iso_pu_bacteria 2585427633 2585992648 488
88 iso_pu_bacteria 2839993093 2839998171 488
89 iso_pu_bacteria 2989771324 2989776248 488
90 iso_pu_bacteria 2838029111 2838034651 489
91 iso_pu_bacteria 2842475841 2842481456 489
92 iso_pu_bacteria 2842502639 2842508298 489
93 3300005937 Ga0081455_10037568 Ga0081455_100375683 490
94 3300006175 Ga0070712_100079307 Ga0070712_1000793072 490
95 3300046530 Ga0495654_0000080 Ga0495654_0000080_83758_85242 490
96 3300047472 Ga0495686_0000877 Ga0495686_0000877_24504_26009 490
97 3300053156 Ga0500622_0020387 Ga0500622_0020387_1099_2583 490
98 iso_pu_bacteria 2923556063 2923558988 490
99 3300047472 Ga0495686_0002808 Ga0495686_0002808_12303_13787 491
100 iso_pu_bacteria 2582581315 2585327075 491
101 iso_pu_bacteria 2582581867 2585402897 491
102 iso_pu_bacteria 2818991448 2819613561 491
103 iso_pu_bacteria 8005484373 8005486856 491
104 iso_pu_bacteria 8005645114 8005647263 491
105 iso_pu_bacteria 8024486573 8024489111 491
106 3300006948 Ga0099826_10000063 Ga0099826_1000006317 492
107 3300028381 Ga0268264_10201861 Ga0268264_102018612 492
108 3300031456 Ga0307513_10029239 Ga0307513_100292392 492
109 3300031901 Ga0307406_10063145 Ga0307406_100631452 492
110 3300047472 Ga0495686_0005161 Ga0495686_0005161_3038_4534 492
111 3300047472 Ga0495686_0045305 Ga0495686_0045305_159_1664 492
112 3300048920 Ga0496117_0110574 Ga0496117_0110574_25_1521 492
113 iso_pu_bacteria 2510917022 2511136022 492
114 iso_pu_bacteria 2524023209 2524460970 492
115 iso_pu_bacteria 2582581299 2585233580 492
116 iso_pu_bacteria 2582581307 2585274442 492
117 iso_pu_bacteria 2582581308 2585282889 492
118 iso_pu_bacteria 2582581315 2585322350 492
119 iso_pu_bacteria 2582581316 2585335038 492
120 iso_pu_bacteria 2585427527 2585532296 492
121 iso_pu_bacteria 2585427530 2585557589 492
122 iso_pu_bacteria 2585427531 2585560894 492
123 iso_pu_bacteria 2585427608 2585899091 492
124 iso_pu_bacteria 2585427609 2585903313 492
125 iso_pu_bacteria 2585428125 2587981568 492
126 iso_pu_bacteria 2615840626 2616307551 492
127 iso_pu_bacteria 2615840698 2616555101 492
128 iso_pu_bacteria 2617270742 2617384273 492
129 iso_pu_bacteria 2667528174 2671112333 492
130 iso_pu_bacteria 2775507266 2778176161 492
131 iso_pu_bacteria 2818991453 2819644071 492
132 iso_pu_bacteria 2821123053 2821129940 492
133 iso_pu_bacteria 2838694306 2838696230 492
134 iso_pu_bacteria 2842077413 2842078705 492
135 iso_pu_bacteria 2842118031 2842118786 492
136 iso_pu_bacteria 2842291075 2842292367 492
137 iso_pu_bacteria 2842298080 2842298895 492
138 iso_pu_bacteria 2842357229 2842359237 492
139 iso_pu_bacteria 2842370503 2842372226 492
140 iso_pu_bacteria 2842377471 2842378764 492
141 iso_pu_bacteria 2842384541 2842385296 492
142 iso_pu_bacteria 2842509118 2842510912 492
143 iso_pu_bacteria 2852387548 2852391429 492
144 iso_pu_bacteria 2919408235 2919410819 492
145 iso_pu_bacteria 3005416602 3005418332 492
146 iso_pu_bacteria 8005314921 8005318776 492
147 iso_pu_bacteria 8005682033 8005682046 492
148 iso_pu_bacteria 8046767195 8046769265 492
149 iso_pu_bacteria 8057575449 8057578573 492
150 3300002773 JGI25152J39213_1000525 JGI25152J39213_100052518 493
151 3300003771 Ga0055526_1000818 Ga0055526_100081814 493
152 3300003775 Ga0055524_1024371 Ga0055524_10243711 493
153 3300003794 Ga0055531_10001927 Ga0055531_100019272 493
154 3300005262 Ga0065165_1014742 Ga0065165_10147422 493
155 3300025258 Ga0209129_1000153 Ga0209129_10001538 493
156 3300025273 Ga0209673_1008538 Ga0209673_10085382 493
157 3300025292 Ga0209676_1001755 Ga0209676_10017551 493
158 3300025295 Ga0209564_1000450 Ga0209564_100045067 493
159 3300025297 Ga0209758_1000153 Ga0209758_100015363 493
160 3300025299 Ga0209256_1001060 Ga0209256_100106018 493
161 3300025302 Ga0207426_1000390 Ga0207426_100039065 493
162 3300025303 Ga0209051_1003796 Ga0209051_10037967 493
163 3300025304 Ga0209257_1002464 Ga0209257_10024647 493
164 3300048909 Ga0496106_0002048 Ga0496106_0002048_1314_2810 493
165 3300049569 Ga0501032_0010228 Ga0501032_0010228_49_1545 493
166 3300049571 Ga0501034_0105166 Ga0501034_0105166_1113_2609 493
167 3300049583 Ga0501067_0022696 Ga0501067_0022696_1160_2656 493
168 3300053088 Ga0500644_0010431 Ga0500644_0010431_981_2477 493
169 3300053139 Ga0500568_0001485 Ga0500568_0001485_1641_3137 493
170 3300053160 Ga0500633_0016564 Ga0500633_0016564_406_1902 493
171 3300060353 Ga0501082_0032412 Ga0501082_0032412_1688_3184 493
172 iso_pu_bacteria 2510917030 2511197869 493
173 iso_pu_bacteria 2534681796 2535518018 493
174 iso_pu_bacteria 2582581298 2585225443 493
175 iso_pu_bacteria 2582581867 2585405086 493
176 iso_pu_bacteria 2585427529 2585548282 493
177 iso_pu_bacteria 2585427590 2585823370 493
178 iso_pu_bacteria 2643221634 2644192041 493
179 iso_pu_bacteria 2919100787 2919100839 493
180 iso_pu_bacteria 3005409236 3005412236 493
181 iso_pu_bacteria 3005445848 3005446583 493
182 iso_pu_bacteria 8005542996 8005548889 493
183 iso_pu_bacteria 8024486573 8024490502 493
184 3300002773 JGI25152J39213_1000546 JGI25152J39213_100054611 494
185 3300003187 JGI25151J46595_10003368 JGI25151J46595_100033682 494
186 3300006178 Ga0075367_10109026 Ga0075367_101090261 494
187 3300025233 Ga0209437_106923 Ga0209437_1069231 494
188 3300025253 Ga0209677_101160 Ga0209677_1011609 494
189 3300025284 Ga0209130_1011887 Ga0209130_10118872 494
190 3300025294 Ga0209025_1000172 Ga0209025_100017254 494
191 3300025295 Ga0209564_1020078 Ga0209564_10200782 494
192 3300048919 Ga0496116_0001349 Ga0496116_0001349_17888_19390 494
193 3300048919 Ga0496116_0033365 Ga0496116_0033365_1022_2524 494
194 3300048925 Ga0496122_0003740 Ga0496122_0003740_7467_8969 494
195 3300048927 Ga0496124_0000254 Ga0496124_0000254_27393_28895 494
196 3300050494 nmdc:mga06z11_8615_c1 nmdc:mga06z11_8615_c1_1537_3027 494
197 iso_pu_bacteria 2582581294 2585204418 494
198 iso_pu_bacteria 2582581308 2585282120 494
199 iso_pu_bacteria 2585427527 2585534655 494
200 iso_pu_bacteria 2585427530 2585556554 494
201 iso_pu_bacteria 2643221599 2644003662 494
202 iso_pu_bacteria 2643221643 2644241302 494
203 iso_pu_bacteria 2818991453 2819642139 494
204 iso_pu_bacteria 2919408235 2919414037 494
205 iso_pu_bacteria 3005452660 3005458317 494
206 3300003320 rootH2_10025690 rootH2_100256907 495
207 3300003322 rootL2_10022516 rootL2_100225166 495
208 3300003323 rootH1_10041192 rootH1_100411922 495
209 3300025303 Ga0209051_1006554 Ga0209051_10065547 495
210 3300046507 Ga0495606_0002214 Ga0495606_0002214_8843_10348 495
211 3300046660 Ga0495625_0012950 Ga0495625_0012950_4193_5686 495
212 3300046674 Ga0495588_0055261 Ga0495588_0055261_450_1955 495
213 3300047317 Ga0495604_0006032 Ga0495604_0006032_4318_5823 495
214 3300047443 Ga0495687_000185 Ga0495687_000185_23630_25123 495
215 3300048924 Ga0496121_0064674 Ga0496121_0064674_29_1534 495
216 3300048927 Ga0496124_0064560 Ga0496124_0064560_703_2205 495
217 3300053148 Ga0500590_002352 Ga0500590_002352_453_1958 495
218 3300001979 JGI24740J21852_10002104 JGI24740J21852_100021048 496
219 3300002704 JGI25155J39150_1000012 JGI25155J39150_10000128 496
220 3300002705 JGI25156J39149_1000049 JGI25156J39149_100004985 496
221 3300002737 JGI25162J39368_1000277 JGI25162J39368_100027733 496
222 3300002737 JGI25162J39368_1001842 JGI25162J39368_10018425 496
223 3300002738 JGI25154J39366_1000033 JGI25154J39366_1000033165 496
224 3300002741 JGI25157J39369_1000055 JGI25157J39369_10000558 496
225 3300002773 JGI25152J39213_1000150 JGI25152J39213_100015046 496
226 3300002774 JGI25150J39212_1000115 JGI25150J39212_10001152 496
227 3300002987 JGI25159J45721_1000265 JGI25159J45721_10002655 496
228 3300003187 JGI25151J46595_10000391 JGI25151J46595_1000039146 496
229 3300003214 JGI25165J46597_1000863 JGI25165J46597_10008638 496
230 3300003214 JGI25165J46597_1001099 JGI25165J46597_100109912 496
231 3300003214 JGI25165J46597_1005527 JGI25165J46597_10055272 496
232 3300003215 JGI25153J46596_10008633 JGI25153J46596_100086333 496
233 3300003354 JGI25160J50197_1000006 JGI25160J50197_1000006314 496
234 3300003374 JGI25161J50226_1000004 JGI25161J50226_1000004314 496
235 3300004625 Ga0055543_1000002 Ga0055543_100000221 496
236 3300005262 Ga0065165_1000341 Ga0065165_100034154 496
237 3300005548 Ga0070665_100084378 Ga0070665_1000843782 496
238 3300005614 Ga0068856_100078120 Ga0068856_1000781202 496
239 3300009093 Ga0105240_10000019 Ga0105240_1000001913 496
240 3300009545 Ga0105237_10002268 Ga0105237_1000226816 496
241 3300009551 Ga0105238_10238565 Ga0105238_102385651 496
242 3300010375 Ga0105239_10103455 Ga0105239_101034552 496
243 3300013104 Ga0157370_10001984 Ga0157370_100019849 496
244 3300015262 Ga0182007_10005672 Ga0182007_100056723 496
245 3300025206 Ga0209435_100005 Ga0209435_1000057 496
246 3300025233 Ga0209437_100078 Ga0209437_10007834 496
247 3300025233 Ga0209437_100606 Ga0209437_1006064 496
248 3300025233 Ga0209437_106489 Ga0209437_1064892 496
249 3300025245 Ga0207425_1000217 Ga0207425_10002173 496
250 3300025246 Ga0209646_1000011 Ga0209646_10000117 496
251 3300025250 Ga0209026_1000008 Ga0209026_10000087 496
252 3300025253 Ga0209677_105811 Ga0209677_1058112 496
253 3300025256 Ga0209759_1000004 Ga0209759_10000047 496
254 3300025258 Ga0209129_1000165 Ga0209129_100016594 496
255 3300025261 Ga0209233_1000163 Ga0209233_100016334 496
256 3300025261 Ga0209233_1000521 Ga0209233_10005214 496
257 3300025261 Ga0209233_1000698 Ga0209233_100069814 496
258 3300025284 Ga0209130_1000032 Ga0209130_1000032305 496
259 3300025294 Ga0209025_1000362 Ga0209025_10003623 496
260 3300025297 Ga0209758_1000738 Ga0209758_100073845 496
261 3300025302 Ga0207426_1000077 Ga0207426_1000077305 496
262 3300025913 Ga0207695_10000049 Ga0207695_1000004913 496
263 3300025914 Ga0207671_10000556 Ga0207671_1000055638 496
264 3300025981 Ga0207640_10036816 Ga0207640_100368162 496
265 3300027312 Ga0209371_1001194 Ga0209371_100119418 496
266 3300030500 Ga0268256_1001399 Ga0268256_10013992 496
267 3300047317 Ga0495604_0002788 Ga0495604_0002788_7971_9467 496
268 3300048903 Ga0496100_0015677 Ga0496100_0015677_191_1705 496
269 3300048904 Ga0496101_0037490 Ga0496101_0037490_1645_3159 496
270 3300048905 Ga0496102_0044047 Ga0496102_0044047_1251_2765 496
271 3300048906 Ga0496103_0002163 Ga0496103_0002163_2535_4049 496
272 3300048907 Ga0496104_0060889 Ga0496104_0060889_2015_3529 496
273 3300048908 Ga0496105_0002347 Ga0496105_0002347_10214_11728 496
274 3300048911 Ga0496108_0025356 Ga0496108_0025356_804_2318 496
275 3300048915 Ga0496112_0059809 Ga0496112_0059809_862_2376 496
276 3300048916 Ga0496113_0061191 Ga0496113_0061191_363_1877 496
277 3300048919 Ga0496116_0000952 Ga0496116_0000952_13192_14685 496
278 3300048919 Ga0496116_0011592 Ga0496116_0011592_1099_2607 496
279 3300048919 Ga0496116_0035921 Ga0496116_0035921_1348_2853 496
280 3300048920 Ga0496117_0003219 Ga0496117_0003219_5602_7116 496
281 3300048920 Ga0496117_0059383 Ga0496117_0059383_730_2244 496
282 3300048921 Ga0496118_0003752 Ga0496118_0003752_12141_13655 496
283 3300048921 Ga0496118_0042233 Ga0496118_0042233_775_2283 496
284 3300048922 Ga0496119_0015527 Ga0496119_0015527_4066_5580 496
285 3300048922 Ga0496119_0027436 Ga0496119_0027436_1529_3043 496
286 3300048924 Ga0496121_0024065 Ga0496121_0024065_1786_3300 496
287 3300048924 Ga0496121_0049209 Ga0496121_0049209_828_2321 496
288 3300048925 Ga0496122_0005406 Ga0496122_0005406_4538_6052 496
289 3300048925 Ga0496122_0012629 Ga0496122_0012629_4985_6493 496
290 3300048925 Ga0496122_0022633 Ga0496122_0022633_3127_4641 496
291 3300048926 Ga0496123_0005003 Ga0496123_0005003_4558_6072 496
292 3300048926 Ga0496123_0006458 Ga0496123_0006458_6967_8475 496
293 3300048926 Ga0496123_0018165 Ga0496123_0018165_1587_3101 496
294 3300048927 Ga0496124_0009723 Ga0496124_0009723_573_2087 496
295 3300048928 Ga0496125_0005596 Ga0496125_0005596_5830_7338 496
296 3300048928 Ga0496125_0007868 Ga0496125_0007868_2517_4031 496
297 3300048928 Ga0496125_0070120 Ga0496125_0070120_277_1791 496
298 3300048929 Ga0496126_0047391 Ga0496126_0047391_1755_3269 496
299 3300053125 Ga0500618_004804 Ga0500618_004804_319_1833 496
300 3300053140 Ga0500573_0004725 Ga0500573_0004725_1915_3417 496
301 iso_pu_bacteria 2738541293 2738805152 496
302 3300003215 JGI25153J46596_10003874 JGI25153J46596_100038745 497
303 3300003771 Ga0055526_1002411 Ga0055526_10024113 497
304 3300003771 Ga0055526_1002570 Ga0055526_10025702 497
305 3300025208 Ga0209436_100060 Ga0209436_10006055 497
306 3300025245 Ga0207425_1008732 Ga0207425_10087323 497
307 3300025258 Ga0209129_1002286 Ga0209129_10022863 497
308 3300025273 Ga0209673_1004181 Ga0209673_10041818 497
309 3300025284 Ga0209130_1000015 Ga0209130_100001545 497
310 3300025295 Ga0209564_1000984 Ga0209564_100098419 497
311 3300025297 Ga0209758_1000148 Ga0209758_100014813 497
312 3300025297 Ga0209758_1004992 Ga0209758_10049926 497
313 3300025297 Ga0209758_1005406 Ga0209758_10054064 497
314 3300025299 Ga0209256_1004008 Ga0209256_10040089 497
315 3300025302 Ga0207426_1000122 Ga0207426_1000122187 497
316 3300025303 Ga0209051_1003966 Ga0209051_10039665 497
317 3300041413 Ga0439465_0016816 Ga0439465_0016816_67_1575 497
318 3300046457 Ga0495590_0013448 Ga0495590_0013448_1284_2792 497
319 3300046457 Ga0495590_0030321 Ga0495590_0030321_137_1672 497
320 3300046522 Ga0495643_0015369 Ga0495643_0015369_1377_2885 497
321 3300046522 Ga0495643_0037156 Ga0495643_0037156_418_1953 497
322 3300046542 Ga0495597_0022721 Ga0495597_0022721_594_2129 497
323 3300046660 Ga0495625_0053153 Ga0495625_0053153_607_2142 497
324 3300046665 Ga0495661_0094922 Ga0495661_0094922_26_1531 497
325 3300046694 Ga0495649_0044547 Ga0495649_0044547_167_1702 497
326 3300046694 Ga0495649_0048329 Ga0495649_0048329_395_1903 497
327 3300046810 Ga0495660_0040596 Ga0495660_0040596_541_2076 497
328 3300047443 Ga0495687_036080 Ga0495687_036080_602_2137 497
329 3300048919 Ga0496116_0036629 Ga0496116_0036629_826_2334 497
330 3300048921 Ga0496118_0009888 Ga0496118_0009888_2923_4431 497
331 3300048924 Ga0496121_0074772 Ga0496121_0074772_21_1529 497
332 3300048925 Ga0496122_0032369 Ga0496122_0032369_245_1753 497
333 3300048926 Ga0496123_0028845 Ga0496123_0028845_1344_2852 497
334 3300048927 Ga0496124_0061779 Ga0496124_0061779_1336_2844 497
335 3300048928 Ga0496125_0044381 Ga0496125_0044381_885_2393 497
336 3300050516 nmdc:mga0sz30_6918_c1 nmdc:mga0sz30_6918_c1_1090_2598 497
337 3300053156 Ga0500622_0000618 Ga0500622_0000618_1988_3496 497
338 3300002773 JGI25152J39213_1000268 JGI25152J39213_100026812 498
339 3300003215 JGI25153J46596_10000339 JGI25153J46596_1000033912 498
340 3300005985 Ga0081539_10000992 Ga0081539_1000099211 498
341 3300009093 Ga0105240_10000440 Ga0105240_1000044070 498
342 3300009545 Ga0105237_10001024 Ga0105237_1000102433 498
343 3300015265 Ga0182005_1004348 Ga0182005_10043484 498
344 3300025233 Ga0209437_101626 Ga0209437_1016265 498
345 3300025245 Ga0207425_1007402 Ga0207425_10074022 498
346 3300025253 Ga0209677_102228 Ga0209677_1022285 498
347 3300025258 Ga0209129_1000257 Ga0209129_100025718 498
348 3300025261 Ga0209233_1000139 Ga0209233_100013969 498
349 3300025294 Ga0209025_1000975 Ga0209025_100097522 498
350 3300025297 Ga0209758_1000542 Ga0209758_100054248 498
351 3300025913 Ga0207695_10000180 Ga0207695_1000018046 498
352 3300025914 Ga0207671_10000132 Ga0207671_1000013250 498
353 3300026078 Ga0207702_10131115 Ga0207702_101311152 498
354 3300046519 Ga0495632_0003755 Ga0495632_0003755_7529_9037 498
355 3300048905 Ga0496102_0001449 Ga0496102_0001449_14664_16160 498
356 3300048906 Ga0496103_0019166 Ga0496103_0019166_1045_2541 498
357 3300048908 Ga0496105_0006178 Ga0496105_0006178_4740_6251 498
358 3300048913 Ga0496110_0056738 Ga0496110_0056738_1840_3351 498
359 3300048916 Ga0496113_0087920 Ga0496113_0087920_19_1515 498
360 3300048919 Ga0496116_0003027 Ga0496116_0003027_6023_7534 498
361 3300048920 Ga0496117_0003408 Ga0496117_0003408_13604_15100 498
362 3300048921 Ga0496118_0003830 Ga0496118_0003830_13604_15100 498
363 3300048922 Ga0496119_0005872 Ga0496119_0005872_1988_3499 498
364 3300048924 Ga0496121_0003008 Ga0496121_0003008_4898_6394 498
365 3300048926 Ga0496123_0010409 Ga0496123_0010409_5971_7467 498
366 3300048927 Ga0496124_0008191 Ga0496124_0008191_4787_6298 498
367 3300048928 Ga0496125_0006784 Ga0496125_0006784_978_2474 498
368 iso_pu_bacteria 2818991461 2819687725 498
369 iso_pu_bacteria 3005416602 3005416726 498
370 iso_pu_bacteria 8005314921 8005320630 498
371 3300003316 rootH1_10111598 rootH1_101115987 499
372 3300003771 Ga0055526_1004266 Ga0055526_10042663 499
373 3300003771 Ga0055526_1010518 Ga0055526_10105184 499
374 3300003771 Ga0055526_1019555 Ga0055526_10195552 499
375 3300003775 Ga0055524_1003170 Ga0055524_10031706 499
376 3300003775 Ga0055524_1007270 Ga0055524_10072704 499
377 3300003775 Ga0055524_1013189 Ga0055524_10131893 499
378 3300003790 Ga0055528_1000608 Ga0055528_100060826 499
379 3300003790 Ga0055528_1000829 Ga0055528_10008295 499
380 3300009177 Ga0105248_10333650 Ga0105248_103336501 499
381 3300025258 Ga0209129_1008079 Ga0209129_10080792 499
382 3300025273 Ga0209673_1000023 Ga0209673_1000023160 499
383 3300025273 Ga0209673_1000285 Ga0209673_1000285104 499
384 3300025273 Ga0209673_1002923 Ga0209673_10029238 499
385 3300025294 Ga0209025_1004684 Ga0209025_10046847 499
386 3300025295 Ga0209564_1001633 Ga0209564_100163317 499
387 3300025295 Ga0209564_1006042 Ga0209564_10060425 499
388 3300025295 Ga0209564_1007689 Ga0209564_10076893 499
389 3300025299 Ga0209256_1001675 Ga0209256_100167517 499
390 3300025299 Ga0209256_1007909 Ga0209256_10079092 499
391 3300025302 Ga0207426_1002453 Ga0207426_100245311 499
392 3300025303 Ga0209051_1015387 Ga0209051_10153871 499
393 3300025304 Ga0209257_1023033 Ga0209257_10230331 499
394 3300046512 Ga0495610_0001808 Ga0495610_0001808_9925_11424 499
395 3300046515 Ga0495620_0018909 Ga0495620_0018909_1638_3137 499
396 3300047472 Ga0495686_0007765 Ga0495686_0007765_4470_5969 499
397 3300048908 Ga0496105_0012327 Ga0496105_0012327_1249_2760 499
398 3300048913 Ga0496110_0127640 Ga0496110_0127640_423_1934 499
399 3300048914 Ga0496111_0059167 Ga0496111_0059167_687_2198 499
400 3300048922 Ga0496119_0026372 Ga0496119_0026372_960_2471 499
401 3300048924 Ga0496121_0031667 Ga0496121_0031667_1853_3364 499
402 3300048925 Ga0496122_0051700 Ga0496122_0051700_198_1709 499
403 3300048928 Ga0496125_0035189 Ga0496125_0035189_966_2477 499
404 iso_pu_bacteria 2894652903 2894654329 499
405 iso_pu_bacteria 2904578770 2904579429 499
406 iso_pu_bacteria 2919119836 2919120906 499
407 3300003322 rootL2_10019044 rootL2_1001904414 500
408 3300046519 Ga0495632_0000923 Ga0495632_0000923_16405_17910 500
409 3300048920 Ga0496117_0019073 Ga0496117_0019073_2976_4490 500
410 3300048927 Ga0496124_0000023 Ga0496124_0000023_74938_76452 500
411 3300053125 Ga0500618_002903 Ga0500618_002903_4333_5838 500
412 iso_pu_bacteria 2919119836 2919121283 500
413 3300048919 Ga0496116_0002820 Ga0496116_0002820_557_2074 501
414 3300048928 Ga0496125_0118484 Ga0496125_0118484_93_1610 501
415 3300048929 Ga0496126_0033647 Ga0496126_0033647_156_1673 501
416 3300053142 Ga0500577_0012444 Ga0500577_0012444_366_1889 501
417 3300048909 Ga0496106_0105147 Ga0496106_0105147_260_1780 502
418 3300048910 Ga0496107_0007882 Ga0496107_0007882_2362_3882 502
419 3300048924 Ga0496121_0009497 Ga0496121_0009497_2248_3768 502
420 3300048924 Ga0496121_0031635 Ga0496121_0031635_2076_3599 502
421 3300048925 Ga0496122_0013829 Ga0496122_0013829_1324_2844 502
422 3300048925 Ga0496122_0053309 Ga0496122_0053309_1199_2722 502
423 3300048926 Ga0496123_0005150 Ga0496123_0005150_3324_4844 502
424 3300048926 Ga0496123_0017689 Ga0496123_0017689_1983_3506 502
425 3300048927 Ga0496124_0032690 Ga0496124_0032690_1621_3141 502
426 3300048929 Ga0496126_0004041 Ga0496126_0004041_5503_7023 502
427 3300002773 JGI25152J39213_1000133 JGI25152J39213_100013347 503
428 3300002774 JGI25150J39212_1000097 JGI25150J39212_100009747 503
429 3300003187 JGI25151J46595_10000334 JGI25151J46595_1000033447 503
430 3300003215 JGI25153J46596_10001042 JGI25153J46596_1000104211 503
431 3300003790 Ga0055528_1000039 Ga0055528_1000039115 503
432 3300025245 Ga0207425_1000186 Ga0207425_100018644 503
433 3300025258 Ga0209129_1000165 Ga0209129_100016510 503
434 3300025273 Ga0209673_1000161 Ga0209673_1000161135 503
435 3300025294 Ga0209025_1000362 Ga0209025_100036289 503
436 3300025297 Ga0209758_1000685 Ga0209758_100068544 503
437 3300031911 Ga0307412_10009312 Ga0307412_100093126 503
438 3300048921 Ga0496118_0006505 Ga0496118_0006505_4926_6455 503
439 iso_pu_bacteria 2738541293 2738804145 503
440 iso_pu_bacteria 2738541293 2738799162 504
441 iso_pu_bacteria 2818991448 2819610760 504
442 iso_pu_bacteria 8005645114 8005651406 504
443 3300003771 Ga0055526_1020142 Ga0055526_10201422 505
444 3300003775 Ga0055524_1000504 Ga0055524_100050426 505
445 3300003790 Ga0055528_1000035 Ga0055528_100003526 505
446 3300025273 Ga0209673_1000220 Ga0209673_100022090 505
447 3300025295 Ga0209564_1000955 Ga0209564_10009558 505
448 3300025299 Ga0209256_1000341 Ga0209256_100034159 505
449 3300044684 Ga0466966_0067093 Ga0466966_0067093_127_1698 505
450 3300044694 Ga0466963_0015998 Ga0466963_0015998_930_2501 505
451 3300044765 Ga0466970_0001656 Ga0466970_0001656_8106_9677 505
452 3300045976 Ga0466967_0113502 Ga0466967_0113502_240_1811 505
453 3300005331 Ga0070670_100000759 Ga0070670_10000075916 506
454 3300025925 Ga0207650_10000777 Ga0207650_100007778 506
455 3300048922 Ga0496119_0003134 Ga0496119_0003134_15510_17030 506
456 3300048925 Ga0496122_0005881 Ga0496122_0005881_5175_6695 506
457 iso_pu_bacteria 8005542996 8005544676 506
458 3300025258 Ga0209129_1000250 Ga0209129_100025056 508
459 iso_pu_bacteria 2842482326 2842489075 513
460 iso_pu_bacteria 2513237088 2513598259 515
461 3300013104 Ga0157370_10003953 Ga0157370_1000395319 518
462 iso_pu_bacteria 2510917030 2511196243 519
463 3300001979 JGI24740J21852_10000386 JGI24740J21852_100003867 520
464 3300005614 Ga0068856_100018296 Ga0068856_1000182967 520
465 3300026078 Ga0207702_10013320 Ga0207702_100133207 520

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00924

MS_channel_2nd

Mechanosensitive ion channel, beta-domain

191

259

0.97

PF00027

cNMP_binding

Cyclic nucleotide-binding domain

404

491

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cyd-assembly1.cif.gz_D glxr bound to camp 0.9113 356 489
5j48-assembly1.cif.gz_A pkg i's carboyl terminal cyclic nucleotide binding domain (cnb-b) in a complex with 8-pcpt-cgmp 0.8998 353 464
4qx5-assembly1.cif.gz_A neutron diffraction reveals hydrogen bonds critical for cgmp-selective activation: insights for pkg agonist design 0.8994 353 462
4cyd-assembly2.cif.gz_C glxr bound to camp 0.8979 356 489
5kjy-assembly1.cif.gz_A co-crystal structure of pka ri alpha cnb-b mutant (g316r/a336t) with camp 0.8971 353 466
ID Description Score Start End Superfamily
af_A0A1D6MG59_318_428_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9471 357 458 2.60.120.10
af_P39285_986_1078_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9455 242 332 3.30.70.100
af_A0A0P0WDR2_370_418_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9389 189 237 2.30.30.60
af_P0C0S1_129_178_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9353 189 237 2.30.30.60
af_Q54ZV3_691_741_2.30.30.60 Mainly Beta;Roll;SH3 type barrels.; 0.9346 189 239 2.30.30.60
ID Description Score Start End GO Terms
AF-Q5JM04-F1-model_v4 Potassium channel KAT3 0.9272 356 482 GO:0005249
GO:0034702
AF-A0A512N5H1-F1-model_v4 Catabolite gene activator protein 0.9156 355 489 GO:0003677
GO:0003700
GO:0005829
AF-A0A0E2WIT9-F1-model_v4 deleted 0.9143 356 489
AF-A0A1E9QBI7-F1-model_v4 deleted 0.9122 355 489
AF-A0A2U2CHA3-F1-model_v4 Crp/Fnr family transcriptional regulator 0.91 355 485 GO:0003677
GO:0003700
GO:0005829

Feature Viewer

pLDDT pTM Quality
74.78 0.57 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map