F447085

General Info

Members Datasets Scaffolds Average Seq Length
452 262 329 467

Family's Representative Sequence

Representative Sequence 3300053096|Ga0500641_0001327|Ga0500641_0001327_2159_3742
Length 527
Sequence MTQNKEIWEKEKLCVSATFRENHSPANKKKLISKTTQNNCVVQNNLCTIKKTKTMNTQINGTDIIELGFPEGKIIGIALKINSKRNGFTRDEMITNFKNVLETPENYIDDAIFSKLAVALIEKANEKPEDFIALNQNPNQYSAYGLEHIEDGARKQMEVAMKLPVTVAGALMPDAHQGYGLPIGGVLATKNAIIPYGVGVDIGCRMALSVYDIPEDFYFENEAKFKRELVAHSKFGAGHGFHGQYKSDHLVLENEAFNMNPFVKNLKDKAWSQLGSSGGGNHFVEFGIMEFAKDDVVLNIPKGKYVVLLTHSGSRGMGATIAGHYTKIAKDVCKLPEVAKNLAYLDMNSQLGQEYWMAMNLAGDYASACHEIIHNKMEKALGAAILAKVENHHNFAWKEIWNGEEVIVHRKGATPAGKGVMGIIPGSMTAPGFLVRGKGEENAINSASHGAGRQMSRTQAIKNITKTEMQSILKDHGVTLIGAGLDEAPMAYKDINQVMEAQQDLVDVVAKFTPKMVRMADDGSRED

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
3 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
4 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
5 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
6 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
7 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
8 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
9 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
10 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
11 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
12 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
13 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
14 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
15 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
16 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
17 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
18 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
19 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
20 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
21 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
22 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
23 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
24 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
25 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
26 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
27 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
28 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
29 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
30 2738541283 Pedobacter sp. OK701 Isolate Unclassified
31 2738541284 Pedobacter sp. YR016 Isolate Unclassified
32 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
33 2738541302 Pedobacter sp. CF074 Isolate Unclassified
34 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
35 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
36 2739367651 Pedobacter sp. OK291 Isolate Unclassified
37 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
38 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
39 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
40 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
41 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
42 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
43 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
44 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
45 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
46 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
47 2818991437 Pedobacter terrae 518 Isolate Unclassified
48 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
49 2818991444 Filimonas endophytica 3197 Isolate Unclassified
50 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
51 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
52 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
53 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
54 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
55 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
56 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
57 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
58 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
59 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
60 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
61 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
62 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
63 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
64 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
65 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
66 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
67 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
68 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
69 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
70 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
71 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
72 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
73 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
74 2914759650 Rhizosphaericola mali Isolate Rhizosphere
75 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
76 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
77 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
78 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
79 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
80 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
81 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
82 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
83 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
84 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
85 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
86 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
87 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
88 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
89 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
90 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
91 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
92 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
93 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
94 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
95 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
96 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
97 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
98 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
99 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
100 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
101 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
102 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
103 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
104 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
105 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
106 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
107 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
108 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
109 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
110 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
111 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
112 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
113 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
114 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
115 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
116 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
117 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
118 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
119 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
120 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
121 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
122 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
123 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
124 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
125 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
126 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
127 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
128 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
129 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
130 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
131 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
132 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
133 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
134 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
135 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
136 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
137 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
138 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
139 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
140 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
141 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
142 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
143 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
144 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
145 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
146 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
147 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
148 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
149 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
150 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
151 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
152 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
153 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
154 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
155 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
156 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
157 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
158 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
159 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
160 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
161 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
162 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
163 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
164 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
165 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
166 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
167 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
168 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
170 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
172 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
173 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
174 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
175 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
176 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
177 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
178 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
179 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
180 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
181 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
182 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
183 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
184 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
185 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
186 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
187 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
188 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
189 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
190 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
191 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
192 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
193 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
194 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
195 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
196 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
197 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
198 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
199 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
200 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
201 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
202 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
203 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
204 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
205 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
206 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
207 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
208 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
209 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
210 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
211 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
212 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
213 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
214 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
215 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
216 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
217 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
218 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
219 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
220 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
221 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
222 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
223 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
224 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
225 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
226 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
227 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
228 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
229 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
230 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
231 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
232 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
233 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
234 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
235 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
236 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
237 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
238 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
239 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
240 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
241 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
242 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
243 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
244 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
245 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
246 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
247 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
248 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
249 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
250 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
251 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
252 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
253 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
254 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
255 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
256 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
257 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
258 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
259 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
260 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
261 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
262 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.57
Metatranscriptomes 0.22
Isolates 27.21

Biome Distribution

Category Percentage (%)
Aerial Root 0.44
Bulb 0
Endosphere 13.27
Nodule 1.99
Rhizoplane 1.11
Rhizosphere 58.63
Stem 0
Stem Tuber 0
Unclassified 24.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_459736 2162886007 Bacteria 3783
2 JGI24741J21665_1002190 3300001915 Bacteria 5190
3 JGI24740J21852_10000140 3300001979 Bacteria 27651
4 JGI24739J22299_10010338 3300001989 Bacteria 3466
5 JGI24735J21928_10000011 3300002067 Bacteria 217841
6 JGI25154J39366_1000006 3300002738 Bacteria 336396
7 JGI25152J39213_1000485 3300002773 Bacteria 22570
8 JGI25150J39212_1000049 3300002774 Bacteria 73898
9 JGI25151J46595_10000003 3300003187 Bacteria 715330
10 JGI25153J46596_10000154 3300003215 Bacteria 69318
11 rootH1_10032003 3300003316 Bacteria 2548
12 rootH1_10032003 3300003323 Bacteria 5324
13 rootH2_10008949 3300003320 Bacteria 5213
14 rootH2_10013204 3300003320 Bacteria 8759
15 rootH2_10018567 3300003320 Bacteria 13857
16 rootH2_10036677 3300003320 Bacteria 3108
17 rootH2_10054572 3300003320 Bacteria 4848
18 rootL2_10000576 3300003322 Bacteria 21260
19 rootL2_10013904 3300003322 Bacteria 14184
20 rootL2_10107834 3300003322 Bacteria 5811
21 rootL2_10185635 3300003322 Bacteria 5328
22 rootH1_10005851 3300003323 Bacteria 85811
23 rootH1_10006384 3300003323 Bacteria 17750
24 rootH1_10012599 3300003323 Bacteria 111210
25 rootH1_10022643 3300003323 Bacteria 6007
26 Ga0055535_1004149 3300003761 Bacteria 3676
27 Ga0055528_1000052 3300003790 Bacteria 91910
28 Ga0055530_10001797 3300003791 Bacteria 14887
29 Ga0055530_10004108 3300003791 Bacteria 7734
30 Ga0055531_10000018 3300003794 Bacteria 175214
31 Ga0055531_10001094 3300003794 Bacteria 21244
32 Ga0055543_1003772 3300004625 Bacteria 4328
33 Ga0065165_1000110 3300005262 Bacteria 137063
34 Ga0065165_1001170 3300005262 Bacteria 30482
35 Ga0065165_1008264 3300005262 Bacteria 4914
36 Ga0065165_1028926 3300005262 Bacteria 1781
37 Ga0065714_10003319 3300005288 Bacteria 10832
38 Ga0065714_10004969 3300005288 Bacteria 5237
39 Ga0065714_10005123 3300005288 Bacteria 4516
40 Ga0065714_10064570 3300005288 Bacteria 34798
41 Ga0065714_10065257 3300005288 Bacteria 11420
42 Ga0065714_10071601 3300005288 Bacteria 3525
43 Ga0065714_10086050 3300005288 Bacteria 2115
44 Ga0065704_10000293 3300005289 Bacteria 38183
45 Ga0065704_10003906 3300005289 Bacteria 7823
46 Ga0065704_10075986 3300005289 Bacteria 5316
47 Ga0065704_10083702 3300005289 Bacteria 3429
48 Ga0065704_10090827 3300005289 Bacteria 2761
49 Ga0065704_10097377 3300005289 Bacteria 2397
50 Ga0070682_100000083 3300005337 Bacteria 84391
51 Ga0070668_100004000 3300005347 Bacteria 10909
52 Ga0070668_100033252 3300005347 Bacteria 3926
53 Ga0070684_100002663 3300005535 Bacteria 13192
54 Ga0068855_100000652 3300005563 Bacteria 42351
55 Ga0068855_100071727 3300005563 Bacteria 4026
56 Ga0068856_100005379 3300005614 Bacteria 12620
57 Ga0068856_100036553 3300005614 Bacteria 4815
58 Ga0075366_10000951 3300006195 Bacteria 14104
59 Ga0099824_1003525 3300006942 Bacteria 22856
60 Ga0079104_1000179 3300006946 Bacteria 90381
61 Ga0079104_1000380 3300006946 Bacteria 51788
62 Ga0099826_10005135 3300006948 Bacteria 9324
63 Ga0105244_10000004 3300009036 Bacteria 492478
64 Ga0105244_10000013 3300009036 Bacteria 258350
65 Ga0105240_10000888 3300009093 Bacteria 53670
66 Ga0105240_10004520 3300009093 Bacteria 21135
67 Ga0111539_10005004 3300009094 Bacteria 17230
68 Ga0105243_10000008 3300009148 Bacteria 390270
69 Ga0105243_10000085 3300009148 Bacteria 106602
70 Ga0105239_10037736 3300010375 Bacteria 5295
71 Ga0157373_10000001 3300013100 Bacteria 864756
72 Ga0157373_10000002 3300013100 Bacteria 750094
73 Ga0157373_10000017 3300013100 Bacteria 173186
74 Ga0157373_10000415 3300013100 Bacteria 34274
75 Ga0157373_10057288 3300013100 Bacteria 2764
76 Ga0157371_10000019 3300013102 Bacteria 307914
77 Ga0157371_10000046 3300013102 Bacteria 187304
78 Ga0157371_10003386 3300013102 Bacteria 14483
79 Ga0157371_10004277 3300013102 Bacteria 12529
80 Ga0157371_10007802 3300013102 Bacteria 8600
81 Ga0157370_10000859 3300013104 Bacteria 38553
82 Ga0157370_10000915 3300013104 Bacteria 37393
83 Ga0157370_10002361 3300013104 Bacteria 22770
84 Ga0157370_10005822 3300013104 Bacteria 13777
85 Ga0157370_10006274 3300013104 Bacteria 13155
86 Ga0157370_10006337 3300013104 Bacteria 13074
87 Ga0157370_10007499 3300013104 Bacteria 11852
88 Ga0157370_10011342 3300013104 Bacteria 9334
89 Ga0157370_10013994 3300013104 Bacteria 8239
90 Ga0157370_10023083 3300013104 Bacteria 6184
91 Ga0157370_10039500 3300013104 Bacteria 4561
92 Ga0157370_10044093 3300013104 Bacteria 4289
93 Ga0157370_10046787 3300013104 Bacteria 4148
94 Ga0157370_10069344 3300013104 Unclassified 3330
95 Ga0157369_10000046 3300013105 Bacteria 172851
96 Ga0157369_10002262 3300013105 Bacteria 23146
97 Ga0157369_10103581 3300013105 Bacteria 3031
98 Ga0157374_10002249 3300013296 Bacteria 16255
99 Ga0163162_10000037 3300013306 Bacteria 138420
100 Ga0157372_10006337 3300013307 Bacteria 12587
101 Ga0157380_10290843 3300014326 Bacteria 1500
102 Ga0182008_10000001 3300014497 Bacteria 540790
103 Ga0182008_10000068 3300014497 Bacteria 82807
104 Ga0182008_10000208 3300014497 Bacteria 46272
105 Ga0182008_10000230 3300014497 Bacteria 43597
106 Ga0182008_10030412 3300014497 Bacteria 2723
107 Ga0182006_1000001 3300015261 Bacteria 1091090
108 Ga0182006_1000333 3300015261 Bacteria 40401
109 Ga0182006_1000576 3300015261 Bacteria 27061
110 Ga0182006_1000947 3300015261 Bacteria 19348
111 Ga0182006_1002371 3300015261 Bacteria 10324
112 Ga0182006_1004641 3300015261 Bacteria 6731
113 Ga0182006_1005345 3300015261 Bacteria 6139
114 Ga0182006_1019062 3300015261 Bacteria 2893
115 Ga0182007_10000009 3300015262 Bacteria 316298
116 Ga0182005_1000059 3300015265 Bacteria 100130
117 Ga0183373_1008 3300015682 Bacteria 255339
118 Ga0163161_10000007 3300017792 Bacteria 301614
119 Ga0163161_10000341 3300017792 Bacteria 39792
120 Ga0163161_10000343 3300017792 Bacteria 39534
121 Ga0163161_10001101 3300017792 Bacteria 20390
122 Ga0163161_10170582 3300017792 Bacteria 1663
123 Ga0209436_102528 3300025208 Bacteria 5434
124 Ga0209258_100336 3300025242 Bacteria 70306
125 Ga0207425_1000004 3300025245 Bacteria 1092421
126 Ga0209646_1000031 3300025246 Bacteria 381260
127 Ga0209026_1000019 3300025250 Bacteria 381260
128 Ga0209148_1000157 3300025254 Bacteria 142367
129 Ga0209129_1000005 3300025258 Bacteria 777812
130 Ga0209673_1000153 3300025273 Bacteria 146821
131 Ga0209675_1000034 3300025291 Bacteria 267827
132 Ga0209676_1000009 3300025292 Bacteria 981719
133 Ga0209025_1000009 3300025294 Bacteria 1092561
134 Ga0209564_1005043 3300025295 Bacteria 7727
135 Ga0209758_1000010 3300025297 Bacteria 1092782
136 Ga0209758_1006021 3300025297 Bacteria 8959
137 Ga0209050_1000103 3300025298 Bacteria 229225
138 Ga0209050_1000377 3300025298 Bacteria 84222
139 Ga0209050_1000955 3300025298 Bacteria 37549
140 Ga0209050_1013209 3300025298 Bacteria 3692
141 Ga0207426_1005002 3300025302 Bacteria 6238
142 Ga0207426_1005633 3300025302 Bacteria 5666
143 Ga0209257_1000001 3300025304 Bacteria 2274655
144 Ga0209257_1000299 3300025304 Bacteria 108881
145 Ga0209257_1001837 3300025304 Bacteria 23165
146 Ga0207655_1000008 3300025728 Bacteria 734289
147 Ga0207655_1000031 3300025728 Bacteria 392265
148 Ga0207695_10000066 3300025913 Bacteria 334103
149 Ga0207695_10000584 3300025913 Bacteria 73948
150 Ga0207671_10005565 3300025914 Bacteria 11566
151 Ga0207709_10000006 3300025935 Bacteria 800946
152 Ga0207709_10000169 3300025935 Bacteria 87123
153 Ga0207667_10001001 3300025949 Bacteria 36044
154 Ga0207668_10012254 3300025972 Bacteria 5243
155 Ga0207668_10115101 3300025972 Bacteria 2025
156 Ga0209281_1000116 3300027111 Bacteria 209707
157 Ga0209281_1000119 3300027111 Bacteria 208121
158 Ga0209489_110230 3300027361 Bacteria 10774
159 Ga0209282_1032497 3300027666 Bacteria 3190
160 Ga0307515_10000012 3300028794 Bacteria 582232
161 Ga0307515_10000077 3300028794 Bacteria 228162
162 Ga0307515_10013740 3300028794 Bacteria 15086
163 Ga0307515_10037523 3300028794 Bacteria 7790
164 Ga0307515_10058105 3300028794 Bacteria 5579
165 Ga0265327_10000026 3300031251 Bacteria 379288
166 Ga0265327_10002487 3300031251 Bacteria 19345
167 Ga0307408_100000375 3300031548 Bacteria 40830
168 Ga0307408_100000863 3300031548 Bacteria 23801
169 Ga0307408_100002804 3300031548 Bacteria 12096
170 Ga0307508_10000327 3300031616 Bacteria 57384
171 Ga0307405_10000001 3300031731 Bacteria 1731270
172 Ga0307405_10000016 3300031731 Bacteria 197180
173 Ga0307405_10084204 3300031731 Bacteria 2087
174 Ga0307405_10115109 3300031731 Bacteria 1829
175 Ga0307413_10000019 3300031824 Bacteria 45584
176 Ga0307413_10001061 3300031824 Bacteria 9991
177 Ga0307410_10000026 3300031852 Bacteria 54582
178 Ga0307410_10000040 3300031852 Bacteria 45746
179 Ga0307410_10123423 3300031852 Bacteria 1892
180 Ga0307406_10000013 3300031901 Bacteria 107714
181 Ga0307406_10000138 3300031901 Bacteria 43537
182 Ga0307407_10000006 3300031903 Bacteria 218714
183 Ga0307407_10000373 3300031903 Bacteria 13454
184 Ga0307407_10020576 3300031903 Bacteria 3384
185 Ga0307412_10000006 3300031911 Bacteria 506878
186 Ga0307412_10000026 3300031911 Bacteria 228930
187 Ga0307412_10000722 3300031911 Bacteria 19096
188 Ga0307409_100011594 3300031995 Bacteria 5570
189 Ga0307416_100000016 3300032002 Bacteria 205465
190 Ga0307416_100000032 3300032002 Bacteria 156777
191 Ga0307416_100072155 3300032002 Bacteria 2872
192 Ga0307414_10000008 3300032004 Bacteria 375832
193 Ga0307414_10000012 3300032004 Bacteria 322675
194 Ga0307414_10000161 3300032004 Bacteria 44950
195 Ga0307414_10000912 3300032004 Bacteria 15157
196 Ga0307414_10001106 3300032004 Bacteria 13780
197 Ga0307414_10001347 3300032004 Bacteria 12706
198 Ga0307414_10039337 3300032004 Bacteria 3184
199 Ga0307414_10051461 3300032004 Bacteria 2859
200 Ga0307411_10000008 3300032005 Bacteria 321575
201 Ga0307411_10000013 3300032005 Bacteria 145335
202 Ga0307415_100014680 3300032126 Bacteria 4614
203 Ga0307510_10052370 3300033180 Bacteria 4304
204 Ga0395899_0000001 3300037312 Bacteria 1750322
205 Ga0395899_0000672 3300037312 Bacteria 34623
206 Ga0439447_000646 3300041407 Bacteria 12938
207 Ga0439466_0000172 3300041411 Bacteria 25890
208 Ga0439466_0000318 3300041411 Bacteria 18646
209 Ga0439465_0000086 3300041413 Bacteria 20547
210 Ga0439432_027716 3300042006 Bacteria 1848
211 Ga0466972_0000068 3300044658 Bacteria 102183
212 Ga0466966_0023350 3300044684 Bacteria 4050
213 Ga0453684_0001834 3300044712 Bacteria 55525
214 Ga0453684_0004254 3300044712 Bacteria 30571
215 Ga0453684_0009507 3300044712 Bacteria 16999
216 Ga0453684_0012979 3300044712 Bacteria 13628
217 Ga0453684_0024827 3300044712 Bacteria 8735
218 Ga0453684_0277891 3300044712 Bacteria 1911
219 Ga0466970_0000357 3300044765 Bacteria 22157
220 Ga0466959_0038689 3300045049 Bacteria 3525
221 Ga0451576_0000002 3300045051 Bacteria 1670975
222 Ga0451576_0004141 3300045051 Bacteria 19113
223 Ga0495627_000030 3300046453 Bacteria 228883
224 Ga0495627_002210 3300046453 Bacteria 9682
225 Ga0495627_006496 3300046453 Bacteria 4581
226 Ga0495590_0000391 3300046457 Bacteria 22092
227 Ga0495638_0000004 3300046460 Bacteria 700795
228 Ga0495638_0086548 3300046460 Bacteria 1894
229 Ga0495585_0000235 3300046492 Bacteria 57308
230 Ga0495606_0006926 3300046507 Bacteria 10311
231 Ga0495606_0020786 3300046507 Bacteria 4826
232 Ga0495606_0033838 3300046507 Bacteria 3517
233 Ga0495606_0057513 3300046507 Bacteria 2504
234 Ga0495610_0000036 3300046512 Bacteria 186904
235 Ga0495610_0000992 3300046512 Bacteria 26173
236 Ga0495610_0001007 3300046512 Bacteria 25962
237 Ga0495632_0000331 3300046519 Bacteria 45145
238 Ga0495643_0010393 3300046522 Bacteria 5730
239 Ga0495644_0016430 3300046523 Bacteria 2833
240 Ga0495648_0035054 3300046524 Bacteria 3257
241 Ga0495663_0000014 3300046525 Bacteria 149657
242 Ga0495663_0002553 3300046525 Bacteria 5443
243 Ga0495654_0000003 3300046530 Bacteria 863485
244 Ga0495609_0000003 3300046538 Bacteria 711547
245 Ga0495633_0000001 3300046558 Bacteria 801972
246 Ga0495633_0000058 3300046558 Bacteria 147584
247 Ga0495633_0000254 3300046558 Bacteria 63389
248 Ga0495633_0000361 3300046558 Bacteria 48960
249 Ga0495668_0000057 3300046616 Bacteria 196557
250 Ga0495625_0000135 3300046660 Bacteria 114867
251 Ga0495625_0021871 3300046660 Bacteria 4912
252 Ga0495625_0043072 3300046660 Bacteria 3276
253 Ga0495658_0012925 3300046683 Bacteria 4241
254 Ga0495686_0000010 3300047472 Bacteria 573229
255 Ga0495686_0000136 3300047472 Bacteria 148759
256 Ga0496102_0213436 3300048905 Bacteria 1819
257 Ga0496113_0038956 3300048916 Bacteria 3497
258 Ga0496114_0003831 3300048917 Bacteria 11598
259 Ga0496115_0004883 3300048918 Bacteria 9734
260 Ga0496116_0000004 3300048919 Bacteria 839841
261 Ga0496116_0000047 3300048919 Bacteria 315121
262 Ga0496116_0000068 3300048919 Bacteria 259724
263 Ga0496117_0000062 3300048920 Bacteria 257535
264 Ga0496117_0000289 3300048920 Bacteria 90202
265 Ga0496118_0000113 3300048921 Bacteria 150726
266 Ga0496118_0011747 3300048921 Bacteria 8511
267 Ga0496119_0000024 3300048922 Bacteria 257750
268 Ga0496121_0000468 3300048924 Bacteria 78727
269 Ga0496121_0016768 3300048924 Bacteria 7535
270 Ga0496121_0095113 3300048924 Bacteria 2316
271 Ga0496122_0000171 3300048925 Bacteria 154143
272 Ga0496122_0000282 3300048925 Bacteria 113484
273 Ga0496122_0000895 3300048925 Bacteria 55073
274 Ga0496122_0002067 3300048925 Bacteria 29764
275 Ga0496122_0003042 3300048925 Bacteria 22682
276 Ga0496122_0003686 3300048925 Bacteria 19864
277 Ga0496122_0025486 3300048925 Bacteria 5133
278 Ga0496123_0003122 3300048926 Bacteria 18995
279 Ga0496123_0005275 3300048926 Bacteria 13103
280 Ga0496123_0020689 3300048926 Bacteria 5140
281 Ga0496124_0001247 3300048927 Bacteria 39052
282 Ga0496124_0004416 3300048927 Bacteria 16402
283 Ga0496125_0000012 3300048928 Bacteria 651142
284 Ga0496125_0000050 3300048928 Bacteria 286703
285 Ga0496125_0005161 3300048928 Bacteria 14687
286 Ga0496125_0018946 3300048928 Bacteria 6514
287 Ga0496126_0000495 3300048929 Bacteria 77686
288 Ga0496126_0004927 3300048929 Bacteria 15583
289 Ga0496126_0014920 3300048929 Bacteria 7835
290 Ga0496126_0055899 3300048929 Bacteria 3569
291 Ga0496126_0102699 3300048929 Bacteria 2499
292 Ga0496126_0214265 3300048929 Bacteria 1620
293 Ga0501323_002314 3300049539 Bacteria 1833
294 Ga0501217_014395 3300049661 Unclassified 1786
295 Ga0501238_000414 3300049671 Bacteria 5146
296 Ga0501238_003422 3300049671 Bacteria 1947
297 Ga0501249_000025 3300049679 Bacteria 91259
298 Ga0501249_000469 3300049679 Bacteria 10043
299 Ga0501249_005136 3300049679 Bacteria 2673
300 Ga0501257_020077 3300049686 Bacteria 1566
301 Ga0501241_000004 3300049758 Bacteria 177326
302 Ga0501264_000253 3300049761 Bacteria 8569
303 Ga0501266_000004 3300049763 Bacteria 356286
304 Ga0501266_000005 3300049763 Bacteria 346750
305 Ga0501280_001040 3300049776 Bacteria 5675
306 Ga0501280_001183 3300049776 Bacteria 5117
307 nmdc:mga0k408_1713_c1 3300050493 Bacteria 11794
308 Ga0500583_0029881 3300053092 Bacteria 2381
309 Ga0500651_0000232 3300053093 Bacteria 34617
310 Ga0500641_0000027 3300053096 Bacteria 106908
311 Ga0500641_0000073 3300053096 Bacteria 40903
312 Ga0500641_0000424 3300053096 Bacteria 15527
313 Ga0500641_0001327 3300053096 Bacteria 8787
314 Ga0500556_0033630 3300053104 Bacteria 1759
315 Ga0500569_000055 3300053109 Bacteria 20097
316 Ga0500618_014387 3300053125 Bacteria 2022
317 Ga0500652_027215 3300053131 Bacteria 2209
318 Ga0500658_0000009 3300053134 Bacteria 270303
319 Ga0500658_0000076 3300053134 Bacteria 45618
320 Ga0500658_0004618 3300053134 Bacteria 5138
321 Ga0500559_0025872 3300053136 Bacteria 2498
322 Ga0500577_0001787 3300053142 Bacteria 5497
323 Ga0500616_0000091 3300053153 Bacteria 184945
324 Ga0500616_0015552 3300053153 Bacteria 4348
325 Ga0500622_0000015 3300053156 Bacteria 346227
326 Ga0500622_0000022 3300053156 Bacteria 267246
327 Ga0500622_0001379 3300053156 Bacteria 19568
328 Ga0500636_0069241 3300053177 Bacteria 2048
329 Ga0500584_012493 3300053726 Bacteria 3862

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014497 Ga0182008_10030412 Ga0182008_100304122 386
2 3300003794 Ga0055531_10000018 Ga0055531_1000001896 396
3 3300025304 Ga0209257_1000299 Ga0209257_100029945 396
4 3300047472 Ga0495686_0000010 Ga0495686_0000010_429907_431205 424
5 3300046460 Ga0495638_0086548 Ga0495638_0086548_22_1344 432
6 3300005262 Ga0065165_1001170 Ga0065165_10011702 434
7 3300046507 Ga0495606_0033838 Ga0495606_0033838_2172_3494 439
8 3300044712 Ga0453684_0277891 Ga0453684_0277891_93_1517 441
9 3300003761 Ga0055535_1004149 Ga0055535_10041492 444
10 3300025242 Ga0209258_100336 Ga0209258_10033652 444
11 3300025254 Ga0209148_1000157 Ga0209148_1000157121 444
12 3300045051 Ga0451576_0004141 Ga0451576_0004141_2584_3972 449
13 3300005535 Ga0070684_100002663 Ga0070684_1000026633 451
14 3300031731 Ga0307405_10084204 Ga0307405_100842042 452
15 3300005614 Ga0068856_100036553 Ga0068856_1000365534 453
16 iso_pu_bacteria 2511231000 2511232416 457
17 iso_pu_bacteria 2582581278 2585142043 457
18 iso_pu_bacteria 2582581281 2585158060 457
19 iso_pu_bacteria 2582581282 2585161363 457
20 iso_pu_bacteria 2585428045 2587680112 457
21 iso_pu_bacteria 2585428060 2587747529 457
22 iso_pu_bacteria 2585428061 2587752024 457
23 iso_pu_bacteria 2585428095 2587866355 457
24 iso_pu_bacteria 2585428115 2587944845 457
25 iso_pu_bacteria 2585428182 2588211924 457
26 iso_pu_bacteria 2585428183 2588216409 457
27 iso_pu_bacteria 2585428184 2588221021 457
28 iso_pu_bacteria 2585428185 2588225470 457
29 iso_pu_bacteria 2585428187 2588232061 457
30 iso_pu_bacteria 2588253712 2588448199 457
31 iso_pu_bacteria 2588254255 2590603909 457
32 iso_pu_bacteria 2588254257 2590609472 457
33 iso_pu_bacteria 2728369107 2729201533 457
34 iso_pu_bacteria 2739367874 2740059755 457
35 iso_pu_bacteria 2751185877 2753674665 457
36 iso_pu_bacteria 2765235839 2765574932 457
37 iso_pu_bacteria 2772190705 2772604459 457
38 iso_pu_bacteria 2775506739 2775674951 457
39 iso_pu_bacteria 2816332188 2816876219 457
40 iso_pu_bacteria 2842083920 2842086981 457
41 iso_pu_bacteria 2871720351 2871722060 457
42 iso_pu_bacteria 2905999023 2906003225 457
43 iso_pu_bacteria 2919097161 2919099717 457
44 iso_pu_bacteria 2919399522 2919401968 457
45 iso_pu_bacteria 2945924605 2945925405 457
46 iso_pu_bacteria 2946019816 2946023401 457
47 iso_pu_bacteria 2977243572 2977244234 457
48 iso_pu_bacteria 2984572630 2984573866 457
49 iso_pu_bacteria 2984606641 2984607311 457
50 iso_pu_bacteria 2993372514 2993375705 457
51 iso_pu_bacteria 2993480792 2993482573 457
52 iso_pu_bacteria 2513020052 2513233408 458
53 iso_pu_bacteria 2519899754 2520878802 458
54 iso_pu_bacteria 2643221600 2644011491 458
55 iso_pu_bacteria 2643221667 2644369892 458
56 iso_pu_bacteria 2643221716 2644642265 458
57 iso_pu_bacteria 2643221725 2644685283 458
58 iso_pu_bacteria 2738541279 2738731920 458
59 iso_pu_bacteria 2738541285 2738764485 458
60 iso_pu_bacteria 2738543007 2739213500 458
61 iso_pu_bacteria 2739367857 2740000767 458
62 iso_pu_bacteria 2739367858 2740005583 458
63 iso_pu_bacteria 2802428842 2802654198 458
64 iso_pu_bacteria 2816332280 2817415777 458
65 iso_pu_bacteria 2842903701 2842903719 458
66 iso_pu_bacteria 2857613821 2857615809 458
67 iso_pu_bacteria 2857618242 2857619101 458
68 iso_pu_bacteria 2881359912 2881360423 458
69 iso_pu_bacteria 2881955468 2881956482 458
70 iso_pu_bacteria 2903895155 2903898566 458
71 iso_pu_bacteria 2904555929 2904559164 458
72 iso_pu_bacteria 2919191525 2919194084 458
73 iso_pu_bacteria 2919683626 2919686268 458
74 iso_pu_bacteria 2929150217 2929153023 458
75 iso_pu_bacteria 2958458903 2958463369 458
76 iso_pu_bacteria 2965320100 2965322243 458
77 iso_pu_bacteria 2977268062 2977269686 458
78 iso_pu_bacteria 8054307821 8054308247 458
79 iso_pu_bacteria 8055419101 8055421453 458
80 iso_pu_bacteria 8055592153 8055594076 458
81 iso_pu_bacteria 8056440228 8056440259 458
82 3300003320 rootH2_10008949 rootH2_100089493 459
83 3300009094 Ga0111539_10005004 Ga0111539_100050048 459
84 3300014326 Ga0157380_10290843 Ga0157380_102908431 459
85 3300053156 Ga0500622_0000015 Ga0500622_0000015_123724_125127 459
86 3300053156 Ga0500622_0000022 Ga0500622_0000022_131557_132960 459
87 iso_pu_bacteria 2818991442 2819572654 459
88 iso_pu_bacteria 2821136567 2821139943 459
89 iso_pu_bacteria 2881247448 2881250284 459
90 iso_pu_bacteria 2896317667 2896320103 459
91 iso_pu_bacteria 2904467357 2904472061 459
92 iso_pu_bacteria 2904780799 2904784418 459
93 iso_pu_bacteria 2919177583 2919178957 459
94 iso_pu_bacteria 2958512119 2958515516 459
95 3300001915 JGI24741J21665_1002190 JGI24741J21665_10021902 460
96 3300003320 rootH2_10054572 rootH2_100545723 460
97 3300003322 rootL2_10107834 rootL2_101078348 460
98 3300005288 Ga0065714_10065257 Ga0065714_100652571 460
99 3300005289 Ga0065704_10083702 Ga0065704_100837021 460
100 3300005289 Ga0065704_10097377 Ga0065704_100973772 460
101 3300005337 Ga0070682_100000083 Ga0070682_10000008345 460
102 3300005347 Ga0070668_100004000 Ga0070668_1000040007 460
103 3300005347 Ga0070668_100033252 Ga0070668_1000332522 460
104 3300009036 Ga0105244_10000013 Ga0105244_10000013154 460
105 3300009148 Ga0105243_10000085 Ga0105243_1000008551 460
106 3300013100 Ga0157373_10000017 Ga0157373_100000177 460
107 3300013102 Ga0157371_10000019 Ga0157371_1000001921 460
108 3300013104 Ga0157370_10006274 Ga0157370_100062748 460
109 3300014497 Ga0182008_10000068 Ga0182008_1000006843 460
110 3300015261 Ga0182006_1000001 Ga0182006_1000001153 460
111 3300025291 Ga0209675_1000034 Ga0209675_100003486 460
112 3300025298 Ga0209050_1000955 Ga0209050_100095513 460
113 3300025298 Ga0209050_1013209 Ga0209050_10132092 460
114 3300025728 Ga0207655_1000031 Ga0207655_1000031154 460
115 3300025935 Ga0207709_10000169 Ga0207709_100001693 460
116 3300025972 Ga0207668_10012254 Ga0207668_100122544 460
117 3300025972 Ga0207668_10115101 Ga0207668_101151012 460
118 3300028794 Ga0307515_10000012 Ga0307515_10000012527 460
119 3300028794 Ga0307515_10037523 Ga0307515_100375239 460
120 3300031911 Ga0307412_10000006 Ga0307412_10000006158 460
121 3300031911 Ga0307412_10000722 Ga0307412_1000072220 460
122 3300032002 Ga0307416_100000016 Ga0307416_10000001634 460
123 3300032002 Ga0307416_100072155 Ga0307416_1000721553 460
124 3300032004 Ga0307414_10039337 Ga0307414_100393373 460
125 3300032004 Ga0307414_10051461 Ga0307414_100514612 460
126 3300032126 Ga0307415_100014680 Ga0307415_1000146806 460
127 3300041413 Ga0439465_0000086 Ga0439465_0000086_18903_20294 460
128 3300042006 Ga0439432_027716 Ga0439432_027716_427_1818 460
129 3300046453 Ga0495627_000030 Ga0495627_000030_158629_160020 460
130 3300046453 Ga0495627_002210 Ga0495627_002210_6962_8371 460
131 3300046457 Ga0495590_0000391 Ga0495590_0000391_19397_20788 460
132 3300046460 Ga0495638_0000004 Ga0495638_0000004_155001_156407 460
133 3300046507 Ga0495606_0006926 Ga0495606_0006926_8157_9566 460
134 3300046507 Ga0495606_0020786 Ga0495606_0020786_3123_4514 460
135 3300046512 Ga0495610_0000036 Ga0495610_0000036_24807_26198 460
136 3300046519 Ga0495632_0000331 Ga0495632_0000331_5306_6697 460
137 3300046522 Ga0495643_0010393 Ga0495643_0010393_3087_4496 460
138 3300046525 Ga0495663_0000014 Ga0495663_0000014_15524_16915 460
139 3300046525 Ga0495663_0002553 Ga0495663_0002553_456_1865 460
140 3300046530 Ga0495654_0000003 Ga0495654_0000003_86450_87841 460
141 3300046538 Ga0495609_0000003 Ga0495609_0000003_82983_84374 460
142 3300046558 Ga0495633_0000001 Ga0495633_0000001_162066_163457 460
143 3300046558 Ga0495633_0000254 Ga0495633_0000254_12806_14197 460
144 3300046660 Ga0495625_0000135 Ga0495625_0000135_26658_28049 460
145 3300047472 Ga0495686_0000136 Ga0495686_0000136_51935_53326 460
146 3300048905 Ga0496102_0213436 Ga0496102_0213436_242_1633 460
147 3300048916 Ga0496113_0038956 Ga0496113_0038956_1220_2611 460
148 3300048919 Ga0496116_0000068 Ga0496116_0000068_97077_98468 460
149 3300048920 Ga0496117_0000062 Ga0496117_0000062_95063_96454 460
150 3300048921 Ga0496118_0000113 Ga0496118_0000113_6189_7580 460
151 3300048922 Ga0496119_0000024 Ga0496119_0000024_95074_96465 460
152 3300048924 Ga0496121_0016768 Ga0496121_0016768_3374_4765 460
153 3300048925 Ga0496122_0000171 Ga0496122_0000171_83505_84896 460
154 3300048925 Ga0496122_0000282 Ga0496122_0000282_45528_46946 460
155 3300048925 Ga0496122_0000895 Ga0496122_0000895_9809_11200 460
156 3300048925 Ga0496122_0002067 Ga0496122_0002067_3122_4513 460
157 3300048925 Ga0496122_0003686 Ga0496122_0003686_8329_9720 460
158 3300048926 Ga0496123_0003122 Ga0496123_0003122_8434_9825 460
159 3300048926 Ga0496123_0020689 Ga0496123_0020689_1503_2894 460
160 3300048927 Ga0496124_0001247 Ga0496124_0001247_13109_14500 460
161 3300048928 Ga0496125_0005161 Ga0496125_0005161_8381_9772 460
162 3300048928 Ga0496125_0018946 Ga0496125_0018946_2915_4306 460
163 3300048929 Ga0496126_0000495 Ga0496126_0000495_69949_71340 460
164 3300048929 Ga0496126_0055899 Ga0496126_0055899_800_2191 460
165 3300049539 Ga0501323_002314 Ga0501323_002314_121_1527 460
166 3300049686 Ga0501257_020077 Ga0501257_020077_110_1516 460
167 3300049758 Ga0501241_000004 Ga0501241_000004_27398_28789 460
168 3300049761 Ga0501264_000253 Ga0501264_000253_3990_5396 460
169 3300053092 Ga0500583_0029881 Ga0500583_0029881_711_2138 460
170 3300053109 Ga0500569_000055 Ga0500569_000055_6364_7776 460
171 3300053125 Ga0500618_014387 Ga0500618_014387_284_1684 460
172 3300053134 Ga0500658_0004618 Ga0500658_0004618_2029_3441 460
173 3300053142 Ga0500577_0001787 Ga0500577_0001787_2669_4081 460
174 3300053153 Ga0500616_0000091 Ga0500616_0000091_148751_150157 460
175 iso_pu_bacteria 2519899754 2520882091 460
176 iso_pu_bacteria 2643221600 2644009983 460
177 iso_pu_bacteria 2643221725 2644683576 460
178 iso_pu_bacteria 2738541273 2738698566 460
179 iso_pu_bacteria 2738541283 2738755924 460
180 iso_pu_bacteria 2738543014 2739252892 460
181 iso_pu_bacteria 2802428842 2802652539 460
182 iso_pu_bacteria 2816332280 2817417217 460
183 iso_pu_bacteria 2857613821 2857616023 460
184 iso_pu_bacteria 2857618242 2857620221 460
185 iso_pu_bacteria 2881359912 2881362834 460
186 iso_pu_bacteria 2889290771 2889294509 460
187 iso_pu_bacteria 2903895155 2903898051 460
188 iso_pu_bacteria 2904419702 2904422218 460
189 iso_pu_bacteria 2904555929 2904558939 460
190 iso_pu_bacteria 2919191525 2919191927 460
191 iso_pu_bacteria 2919683626 2919686125 460
192 iso_pu_bacteria 2929150217 2929154513 460
193 iso_pu_bacteria 2929154850 2929159790 460
194 iso_pu_bacteria 2958458903 2958459280 460
195 iso_pu_bacteria 2958512119 2958513092 460
196 iso_pu_bacteria 2977268062 2977271368 460
197 iso_pu_bacteria 8054307821 8054310695 460
198 iso_pu_bacteria 8055419101 8055422842 460
199 3300005262 Ga0065165_1008264 Ga0065165_10082643 461
200 3300005288 Ga0065714_10071601 Ga0065714_100716012 461
201 3300005289 Ga0065704_10090827 Ga0065704_100908273 461
202 3300006942 Ga0099824_1003525 Ga0099824_100352513 461
203 3300006946 Ga0079104_1000179 Ga0079104_100017984 461
204 3300006948 Ga0099826_10005135 Ga0099826_100051359 461
205 3300009036 Ga0105244_10000004 Ga0105244_10000004397 461
206 3300013100 Ga0157373_10000002 Ga0157373_1000000221 461
207 3300013102 Ga0157371_10003386 Ga0157371_1000338613 461
208 3300013104 Ga0157370_10000915 Ga0157370_1000091526 461
209 3300013104 Ga0157370_10007499 Ga0157370_100074993 461
210 3300013104 Ga0157370_10013994 Ga0157370_100139941 461
211 3300013104 Ga0157370_10044093 Ga0157370_100440935 461
212 3300013105 Ga0157369_10002262 Ga0157369_100022621 461
213 3300015261 Ga0182006_1019062 Ga0182006_10190622 461
214 3300015265 Ga0182005_1000059 Ga0182005_100005975 461
215 3300017792 Ga0163161_10000007 Ga0163161_10000007143 461
216 3300017792 Ga0163161_10170582 Ga0163161_101705821 461
217 3300025208 Ga0209436_102528 Ga0209436_1025283 461
218 3300025728 Ga0207655_1000008 Ga0207655_1000008191 461
219 3300027111 Ga0209281_1000116 Ga0209281_100011660 461
220 3300027361 Ga0209489_110230 Ga0209489_1102307 461
221 3300027666 Ga0209282_1032497 Ga0209282_10324972 461
222 3300028794 Ga0307515_10058105 Ga0307515_100581052 461
223 3300031548 Ga0307408_100000375 Ga0307408_10000037524 461
224 3300031548 Ga0307408_100000863 Ga0307408_10000086312 461
225 3300031731 Ga0307405_10000001 Ga0307405_100000011107 461
226 3300031731 Ga0307405_10115109 Ga0307405_101151092 461
227 3300031824 Ga0307413_10000019 Ga0307413_100000199 461
228 3300031852 Ga0307410_10000040 Ga0307410_100000404 461
229 3300031901 Ga0307406_10000013 Ga0307406_100000134 461
230 3300031903 Ga0307407_10020576 Ga0307407_100205762 461
231 3300032004 Ga0307414_10000012 Ga0307414_10000012177 461
232 3300032005 Ga0307411_10000013 Ga0307411_1000001393 461
233 3300033180 Ga0307510_10052370 Ga0307510_100523703 461
234 3300041411 Ga0439466_0000318 Ga0439466_0000318_1976_3412 461
235 3300048919 Ga0496116_0000047 Ga0496116_0000047_289732_291123 461
236 3300048921 Ga0496118_0011747 Ga0496118_0011747_2328_3719 461
237 3300048924 Ga0496121_0095113 Ga0496121_0095113_161_1552 461
238 3300048927 Ga0496124_0004416 Ga0496124_0004416_10464_11855 461
239 3300048928 Ga0496125_0000050 Ga0496125_0000050_24905_26296 461
240 3300048929 Ga0496126_0014920 Ga0496126_0014920_3215_4606 461
241 3300048929 Ga0496126_0102699 Ga0496126_0102699_288_1679 461
242 3300048929 Ga0496126_0214265 Ga0496126_0214265_105_1496 461
243 3300049661 Ga0501217_014395 Ga0501217_014395_207_1625 461
244 3300049671 Ga0501238_003422 Ga0501238_003422_34_1425 461
245 3300049679 Ga0501249_000025 Ga0501249_000025_7165_8556 461
246 3300049763 Ga0501266_000005 Ga0501266_000005_1966_3357 461
247 3300049776 Ga0501280_001040 Ga0501280_001040_1055_2446 461
248 3300053096 Ga0500641_0000027 Ga0500641_0000027_82689_84080 461
249 3300053134 Ga0500658_0000076 Ga0500658_0000076_24664_26055 461
250 3300053726 Ga0500584_012493 Ga0500584_012493_2417_3808 461
251 iso_pu_bacteria 2839989709 2839991035 461
252 iso_pu_bacteria 2857627736 2857630497 461
253 iso_pu_bacteria 2904419702 2904423456 461
254 iso_pu_bacteria 8036736890 8036738172 461
255 3300003316 rootH1_10032003 rootH1_100320032 462
256 3300003320 rootH2_10013204 rootH2_100132045 462
257 3300003322 rootL2_10013904 rootL2_100139046 462
258 3300005288 Ga0065714_10005123 Ga0065714_100051232 462
259 3300005289 Ga0065704_10003906 Ga0065704_100039066 462
260 3300005289 Ga0065704_10075986 Ga0065704_100759862 462
261 3300006946 Ga0079104_1000380 Ga0079104_100038035 462
262 3300009093 Ga0105240_10000888 Ga0105240_1000088850 462
263 3300009093 Ga0105240_10004520 Ga0105240_1000452021 462
264 3300009148 Ga0105243_10000008 Ga0105243_10000008268 462
265 3300010375 Ga0105239_10037736 Ga0105239_100377362 462
266 3300013100 Ga0157373_10000001 Ga0157373_10000001335 462
267 3300013104 Ga0157370_10000859 Ga0157370_1000085917 462
268 3300013104 Ga0157370_10006337 Ga0157370_100063372 462
269 3300013104 Ga0157370_10011342 Ga0157370_100113423 462
270 3300013104 Ga0157370_10023083 Ga0157370_100230833 462
271 3300013104 Ga0157370_10039500 Ga0157370_100395003 462
272 3300013104 Ga0157370_10046787 Ga0157370_100467872 462
273 3300013105 Ga0157369_10103581 Ga0157369_101035812 462
274 3300014497 Ga0182008_10000230 Ga0182008_1000023031 462
275 3300015261 Ga0182006_1000947 Ga0182006_10009475 462
276 3300015261 Ga0182006_1002371 Ga0182006_10023717 462
277 3300015261 Ga0182006_1004641 Ga0182006_10046412 462
278 3300015261 Ga0182006_1005345 Ga0182006_10053453 462
279 3300025913 Ga0207695_10000066 Ga0207695_10000066174 462
280 3300025913 Ga0207695_10000584 Ga0207695_1000058469 462
281 3300025914 Ga0207671_10005565 Ga0207671_100055657 462
282 3300025935 Ga0207709_10000006 Ga0207709_10000006210 462
283 3300027111 Ga0209281_1000119 Ga0209281_1000119139 462
284 3300031251 Ga0265327_10002487 Ga0265327_1000248712 462
285 3300031548 Ga0307408_100002804 Ga0307408_1000028046 462
286 3300031731 Ga0307405_10000001 Ga0307405_100000011510 462
287 3300031824 Ga0307413_10001061 Ga0307413_100010614 462
288 3300031852 Ga0307410_10000026 Ga0307410_1000002639 462
289 3300031852 Ga0307410_10123423 Ga0307410_101234232 462
290 3300031901 Ga0307406_10000138 Ga0307406_1000013814 462
291 3300031903 Ga0307407_10000373 Ga0307407_100003732 462
292 3300032004 Ga0307414_10000008 Ga0307414_10000008285 462
293 3300032004 Ga0307414_10000161 Ga0307414_1000016129 462
294 3300032004 Ga0307414_10001106 Ga0307414_100011062 462
295 3300032005 Ga0307411_10000008 Ga0307411_10000008200 462
296 3300041407 Ga0439447_000646 Ga0439447_000646_8048_9469 462
297 3300041411 Ga0439466_0000172 Ga0439466_0000172_24290_25711 462
298 3300046453 Ga0495627_006496 Ga0495627_006496_1333_2754 462
299 3300046616 Ga0495668_0000057 Ga0495668_0000057_25401_26822 462
300 3300048917 Ga0496114_0003831 Ga0496114_0003831_6623_8044 462
301 3300048918 Ga0496115_0004883 Ga0496115_0004883_2982_4415 462
302 3300048919 Ga0496116_0000004 Ga0496116_0000004_380548_381969 462
303 3300048920 Ga0496117_0000289 Ga0496117_0000289_78418_79899 462
304 3300048925 Ga0496122_0003042 Ga0496122_0003042_19081_20499 462
305 3300048925 Ga0496122_0025486 Ga0496122_0025486_109_1530 462
306 3300048926 Ga0496123_0005275 Ga0496123_0005275_349_1767 462
307 3300048928 Ga0496125_0000012 Ga0496125_0000012_382527_383948 462
308 3300048929 Ga0496126_0004927 Ga0496126_0004927_1830_3251 462
309 3300049671 Ga0501238_000414 Ga0501238_000414_3602_5023 462
310 3300049679 Ga0501249_000469 Ga0501249_000469_4129_5550 462
311 3300049679 Ga0501249_005136 Ga0501249_005136_1206_2627 462
312 3300049763 Ga0501266_000004 Ga0501266_000004_275467_276888 462
313 3300049776 Ga0501280_001183 Ga0501280_001183_3501_5027 462
314 3300053096 Ga0500641_0000073 Ga0500641_0000073_25142_26563 462
315 3300053096 Ga0500641_0000424 Ga0500641_0000424_7236_8633 462
316 3300053096 Ga0500641_0001327 Ga0500641_0001327_2159_3742 462
317 3300053104 Ga0500556_0033630 Ga0500556_0033630_293_1714 462
318 3300053134 Ga0500658_0000009 Ga0500658_0000009_196310_197731 462
319 3300053153 Ga0500616_0015552 Ga0500616_0015552_2722_4137 462
320 iso_pu_bacteria 2599185184 2599480631 462
321 iso_pu_bacteria 2721755487 2722728552 462
322 iso_pu_bacteria 2738541284 2738762432 462
323 iso_pu_bacteria 2738541302 2738854153 462
324 iso_pu_bacteria 2739367651 2739587633 462
325 iso_pu_bacteria 2818991437 2819545540 462
326 iso_pu_bacteria 2818991444 2819585545 462
327 iso_pu_bacteria 2842722452 2842724579 462
328 iso_pu_bacteria 2842909656 2842911927 462
329 iso_pu_bacteria 2849281842 2849283564 462
330 iso_pu_bacteria 2902048731 2902050816 462
331 iso_pu_bacteria 2904445276 2904448037 462
332 iso_pu_bacteria 2914759650 2914760566 462
333 iso_pu_bacteria 2928078545 2928081385 462
334 iso_pu_bacteria 2928147474 2928150444 462
335 iso_pu_bacteria 2929239360 2929244837 462
336 iso_pu_bacteria 2929921140 2929921628 462
337 iso_pu_bacteria 2932082852 2932085266 462
338 iso_pu_bacteria 2945997725 2945998564 462
339 iso_pu_bacteria 2954016120 2954021026 462
340 iso_pu_bacteria 8003151029 8003152970 462
341 3300003322 rootL2_10185635 rootL2_101856356 463
342 3300003323 rootH1_10022643 rootH1_100226433 463
343 3300003794 Ga0055531_10001094 Ga0055531_1000109412 463
344 3300013102 Ga0157371_10007802 Ga0157371_100078023 463
345 3300013104 Ga0157370_10002361 Ga0157370_100023616 463
346 3300013104 Ga0157370_10069344 Ga0157370_100693442 463
347 3300025304 Ga0209257_1000001 Ga0209257_1000001968 463
348 3300031251 Ga0265327_10000026 Ga0265327_10000026133 463
349 3300031616 Ga0307508_10000327 Ga0307508_1000032718 463
350 3300044712 Ga0453684_0004254 Ga0453684_0004254_23434_24900 463
351 3300046660 Ga0495625_0043072 Ga0495625_0043072_550_1971 463
352 3300048924 Ga0496121_0000468 Ga0496121_0000468_44383_45837 463
353 3300053136 Ga0500559_0025872 Ga0500559_0025872_436_1869 463
354 3300053177 Ga0500636_0069241 Ga0500636_0069241_512_1945 463
355 3300001979 JGI24740J21852_10000140 JGI24740J21852_100001405 464
356 3300001989 JGI24739J22299_10010338 JGI24739J22299_100103383 464
357 3300002738 JGI25154J39366_1000006 JGI25154J39366_1000006268 464
358 3300003320 rootH2_10036677 rootH2_100366773 464
359 3300003790 Ga0055528_1000052 Ga0055528_100005253 464
360 3300003791 Ga0055530_10001797 Ga0055530_100017975 464
361 3300003791 Ga0055530_10004108 Ga0055530_100041084 464
362 3300004625 Ga0055543_1003772 Ga0055543_10037722 464
363 3300005262 Ga0065165_1000110 Ga0065165_100011094 464
364 3300005262 Ga0065165_1028926 Ga0065165_10289262 464
365 3300005288 Ga0065714_10064570 Ga0065714_100645706 464
366 3300005288 Ga0065714_10086050 Ga0065714_100860502 464
367 3300013100 Ga0157373_10057288 Ga0157373_100572883 464
368 3300013102 Ga0157371_10000046 Ga0157371_1000004679 464
369 3300013104 Ga0157370_10005822 Ga0157370_100058228 464
370 3300013105 Ga0157369_10000046 Ga0157369_1000004676 464
371 3300013306 Ga0163162_10000037 Ga0163162_10000037104 464
372 3300014497 Ga0182008_10000208 Ga0182008_100002083 464
373 3300015261 Ga0182006_1000333 Ga0182006_100033319 464
374 3300015261 Ga0182006_1000576 Ga0182006_100057612 464
375 3300015262 Ga0182007_10000009 Ga0182007_10000009133 464
376 3300015682 Ga0183373_1008 Ga0183373_1008176 464
377 3300017792 Ga0163161_10000343 Ga0163161_1000034316 464
378 3300017792 Ga0163161_10001101 Ga0163161_100011016 464
379 3300025246 Ga0209646_1000031 Ga0209646_1000031297 464
380 3300025250 Ga0209026_1000019 Ga0209026_1000019297 464
381 3300025273 Ga0209673_1000153 Ga0209673_100015370 464
382 3300025292 Ga0209676_1000009 Ga0209676_1000009737 464
383 3300025295 Ga0209564_1005043 Ga0209564_10050438 464
384 3300025297 Ga0209758_1006021 Ga0209758_10060216 464
385 3300025298 Ga0209050_1000103 Ga0209050_1000103136 464
386 3300025298 Ga0209050_1000377 Ga0209050_100037737 464
387 3300025302 Ga0207426_1005002 Ga0207426_10050025 464
388 3300025302 Ga0207426_1005633 Ga0207426_10056332 464
389 3300025304 Ga0209257_1001837 Ga0209257_10018379 464
390 3300028794 Ga0307515_10013740 Ga0307515_1001374014 464
391 3300031731 Ga0307405_10000016 Ga0307405_10000016127 464
392 3300031903 Ga0307407_10000006 Ga0307407_10000006116 464
393 3300031995 Ga0307409_100011594 Ga0307409_1000115944 464
394 3300032002 Ga0307416_100000032 Ga0307416_10000003226 464
395 3300032004 Ga0307414_10000912 Ga0307414_100009125 464
396 3300044658 Ga0466972_0000068 Ga0466972_0000068_1232_2656 464
397 3300044765 Ga0466970_0000357 Ga0466970_0000357_19378_20802 464
398 3300046512 Ga0495610_0000992 Ga0495610_0000992_18503_19927 464
399 3300046512 Ga0495610_0001007 Ga0495610_0001007_17760_19184 464
400 3300046660 Ga0495625_0021871 Ga0495625_0021871_3103_4527 464
401 3300053131 Ga0500652_027215 Ga0500652_027215_112_1539 464
402 3300044712 Ga0453684_0001834 Ga0453684_0001834_3750_5183 465
403 3300045051 Ga0451576_0000002 Ga0451576_0000002_183573_185000 465
404 3300046558 Ga0495633_0000058 Ga0495633_0000058_123737_125311 465
405 2162886007 SwRhRL2b_contig_459736 SwRhRL2b_0115.00005280 466
406 3300002067 JGI24735J21928_10000011 JGI24735J21928_100000116 466
407 3300002773 JGI25152J39213_1000485 JGI25152J39213_10004857 466
408 3300002774 JGI25150J39212_1000049 JGI25150J39212_100004955 466
409 3300003187 JGI25151J46595_10000003 JGI25151J46595_1000000355 466
410 3300003215 JGI25153J46596_10000154 JGI25153J46596_1000015414 466
411 3300003320 rootH2_10018567 rootH2_100185673 466
412 3300003322 rootL2_10000576 rootL2_100005768 466
413 3300003323 rootH1_10005851 rootH1_1000585137 466
414 3300003323 rootH1_10006384 rootH1_100063843 466
415 3300003323 rootH1_10012599 rootH1_1001259918 466
416 3300005288 Ga0065714_10003319 Ga0065714_100033194 466
417 3300005288 Ga0065714_10004969 Ga0065714_100049692 466
418 3300005289 Ga0065704_10000293 Ga0065704_1000029328 466
419 3300005563 Ga0068855_100000652 Ga0068855_10000065234 466
420 3300005563 Ga0068855_100071727 Ga0068855_1000717272 466
421 3300005614 Ga0068856_100005379 Ga0068856_1000053799 466
422 3300006195 Ga0075366_10000951 Ga0075366_100009517 466
423 3300013100 Ga0157373_10000415 Ga0157373_100004154 466
424 3300013102 Ga0157371_10004277 Ga0157371_100042777 466
425 3300013296 Ga0157374_10002249 Ga0157374_100022497 466
426 3300013307 Ga0157372_10006337 Ga0157372_100063372 466
427 3300014497 Ga0182008_10000001 Ga0182008_1000000175 466
428 3300017792 Ga0163161_10000341 Ga0163161_100003413 466
429 3300025245 Ga0207425_1000004 Ga0207425_1000004361 466
430 3300025258 Ga0209129_1000005 Ga0209129_1000005579 466
431 3300025294 Ga0209025_1000009 Ga0209025_1000009361 466
432 3300025297 Ga0209758_1000010 Ga0209758_1000010362 466
433 3300025949 Ga0207667_10001001 Ga0207667_1000100116 466
434 3300028794 Ga0307515_10000077 Ga0307515_1000007718 466
435 3300031911 Ga0307412_10000026 Ga0307412_1000002676 466
436 3300032004 Ga0307414_10001347 Ga0307414_1000134714 466
437 3300037312 Ga0395899_0000001 Ga0395899_0000001_1439560_1440960 466
438 3300037312 Ga0395899_0000672 Ga0395899_0000672_1450_2850 466
439 3300044684 Ga0466966_0023350 Ga0466966_0023350_1155_2555 466
440 3300044712 Ga0453684_0009507 Ga0453684_0009507_11516_12982 466
441 3300044712 Ga0453684_0012979 Ga0453684_0012979_8616_10022 466
442 3300044712 Ga0453684_0024827 Ga0453684_0024827_5637_7067 466
443 3300045049 Ga0466959_0038689 Ga0466959_0038689_283_1683 466
444 3300046492 Ga0495585_0000235 Ga0495585_0000235_51082_52482 466
445 3300046507 Ga0495606_0057513 Ga0495606_0057513_840_2240 466
446 3300046523 Ga0495644_0016430 Ga0495644_0016430_370_1770 466
447 3300046524 Ga0495648_0035054 Ga0495648_0035054_1812_3212 466
448 3300046558 Ga0495633_0000361 Ga0495633_0000361_44991_46391 466
449 3300046683 Ga0495658_0012925 Ga0495658_0012925_1515_2915 466
450 3300050493 nmdc:mga0k408_1713_c1 nmdc:mga0k408_1713_c1_9215_10615 466
451 3300053093 Ga0500651_0000232 Ga0500651_0000232_11033_12433 466
452 3300053156 Ga0500622_0001379 Ga0500622_0001379_5063_6463 466

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01139

RtcB

tRNA-splicing ligase RtcB

156

520

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dcb-assembly2.cif.gz_B rna ligase rtcb from pyrococcus horikoshii in complex with ni2+ and gtp 0.8631 95 464
4dwr-assembly3.cif.gz_C rna ligase rtcb/mn2+ complex 0.8624 95 465
7p3b-assembly2.cif.gz_B human rna ligase rtcb in complex with gmp and co(ii) 0.855 99 464
7p3b-assembly1.cif.gz_A human rna ligase rtcb in complex with gmp and co(ii) 0.8467 99 464
8btt-assembly1.cif.gz_A structure of human rtcb 0.7956 99 464
ID Description Score Start End Superfamily
af_Q8I5J3_323_568_3.90.1860.10 Alpha Beta;Alpha-Beta Complex;tRNA-splicing ligase RtcB;tRNA-splicing ligase RtcB 0.8899 254 464 3.90.1860.10
af_Q99LF4_9_505_3.90.1860.10 Alpha Beta;Alpha-Beta Complex;tRNA-splicing ligase RtcB;tRNA-splicing ligase RtcB 0.8848 99 464 3.90.1860.10
af_Q58095_565_968_3.90.1860.10 Alpha Beta;Alpha-Beta Complex;tRNA-splicing ligase RtcB;tRNA-splicing ligase RtcB 0.861 150 464 3.90.1860.10
af_Q4DZR4_37_449_3.90.1860.10 Alpha Beta;Alpha-Beta Complex;tRNA-splicing ligase RtcB;tRNA-splicing ligase RtcB 0.8594 76 464 3.90.1860.10
1uc2A00 Alpha Beta;Alpha-Beta Complex;tRNA-splicing ligase RtcB;tRNA-splicing ligase RtcB 0.8533 95 464 3.90.1860.10
ID Description Score Start End GO Terms
AF-A0A3D1D776-F1-model_v4 deleted 0.9962 368 465
AF-A0A6M1Q2D2-F1-model_v4 deleted 0.995 200 466
AF-A0A4U0N692-F1-model_v4 3'-phosphate/5'-hydroxy nucleic acid ligase (EC 6.5.1.8) 0.9932 218 466 GO:0003909
GO:0005525
GO:0006281
GO:0006396
GO:0030145
GO:0042245
GO:0170057
AF-A0A4V1ZYT8-F1-model_v4 3'-phosphate/5'-hydroxy nucleic acid ligase (EC 6.5.1.8) 0.9903 348 466 GO:0003909
GO:0005525
GO:0006281
GO:0006396
GO:0030145
GO:0042245
GO:0170057
AF-A0A6L3K3L5-F1-model_v4 deleted 0.99 358 466

Feature Viewer

pLDDT pTM Quality
91.22 0.81 High
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Predicted Structure (AlphaFold2)

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