F445202

General Info

Members Datasets Scaffolds Average Seq Length
444 357 230 392

Family's Representative Sequence

Representative Sequence 3300003187|JGI25151J46595_10000081|JGI25151J46595_1000008114
Length 448
Sequence MLLSLRIVVRITSTGGDVNPLGPKICCTAHLPLIPIPCRAEGNDGTQAKSRMITGRNGPRRLSIFGSTGSIGKNTLDVVKHLGGLENFEISVLTGNENVDLLAQQARAAGAKLAVTASDSHYEALKSALSGSGIAVAAGQSGLMEAADLEAEWVMAAIVGTAGLAPTLAAARKGADIALANKECLVSAGDLFVQSVRRGGGTLLPVDSEHNAIFQVLEENQRHAVERIILTASGGPFRNASLEEMAGVTVETARAHPNWSMGLKISIDSASMFNKALEMIEAKHLFGLTPEQIEVIVHPQSVIHSMVGYTDGSVLAQLGAPDMRTAIGYALAHPRRPNLPIERLDFAKLARLDFEAPDETRFPALRLARLAMTRGGVQGAVLNAAKEVALEAFIAGRLSFLAMADVTETVMDQLAHLPEAATMDDVFAVDKEARQRAAVLVASREKAA

Samples

Sample ID Description Type Environment
1 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
2 2509276019 Ensifer aridi TW10 Isolate Nodule
3 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
4 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
5 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
6 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
7 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
8 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
9 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
10 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
11 2516143018 Ensifer sp. BR816 Isolate Nodule
12 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
13 2519899620 Rhizobium sp. Pop5 Isolate Nodule
14 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
15 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
16 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
17 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
18 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
19 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
20 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
21 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
22 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
23 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
24 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
25 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
26 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
27 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
28 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
29 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
30 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
31 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
32 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
33 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
34 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
35 2643221557 Ensifer sp. Root558 Isolate Unclassified
36 2643221558 Rhizobium sp. Root149 Isolate Unclassified
37 2643221599 Rhizobium sp. Root708 Isolate Unclassified
38 2643221607 Rhizobium sp. Root73 Isolate Unclassified
39 2643221610 Ensifer sp. Root74 Isolate Unclassified
40 2643221618 Ensifer sp. Root231 Isolate Unclassified
41 2643221626 Ensifer sp. Root31 Isolate Unclassified
42 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
43 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
44 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
45 2643221655 Ensifer sp. Root1252 Isolate Unclassified
46 2643221659 Ensifer sp. Root127 Isolate Unclassified
47 2643221668 Ensifer sp. Root423 Isolate Unclassified
48 2643221675 Ensifer sp. Root1298 Isolate Unclassified
49 2643221680 Ensifer sp. Root1312 Isolate Unclassified
50 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
51 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
52 2643221698 Ensifer sp. Root142 Isolate Unclassified
53 2643221712 Ensifer sp. Root258 Isolate Unclassified
54 2643221723 Ensifer sp. Root278 Isolate Unclassified
55 2643221726 Ensifer sp. Root954 Isolate Unclassified
56 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
57 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
58 2718217882 Rhizobium sp. N741 Isolate Nodule
59 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
60 2718218009 Rhizobium sp. N561 Isolate Nodule
61 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
62 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
63 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
64 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
65 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
66 2718218363 Rhizobium sp. N113 Isolate Nodule
67 2718218365 Rhizobium sp. N731 Isolate Nodule
68 2718218366 Rhizobium sp. N621 Isolate Nodule
69 2721755514 Rhizobium sp. N6212 Isolate Nodule
70 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
71 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
72 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
73 2721755810 Rhizobium sp. N871 Isolate Nodule
74 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
75 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
76 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
77 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
78 2728369365 Rhizobium sp. N1341 Isolate Nodule
79 2728369397 Rhizobium sp. N1314 Isolate Nodule
80 2738541293 Rhizobium sp. GV031 Isolate Unclassified
81 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
82 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
83 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
84 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
85 2791355256 Rhizobium sp. M10 Isolate Nodule
86 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
87 2791355260 Rhizobium sp. L9 Isolate Nodule
88 2791355261 Rhizobium sp. J15 Isolate Nodule
89 2791355262 Rhizobium sp. M1 Isolate Nodule
90 2791355264 Rhizobium sp. S9 Isolate Nodule
91 2791355265 Rhizobium sp. H4 Isolate Nodule
92 2791355266 Rhizobium sp. L43 Isolate Nodule
93 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
94 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
95 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
96 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
97 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
98 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
99 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
100 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
101 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
102 2802429633 Rhizobium anhuiense J3 Isolate Nodule
103 2802429634 Rhizobium anhuiense S10 Isolate Nodule
104 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
105 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
106 2802429637 Rhizobium anhuiense C15 Isolate Nodule
107 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
108 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
109 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
110 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
111 2838048938 Rhizobium pisi 27/80 Isolate Nodule
112 2838061910 Rhizobium phaseoli L15 Isolate Nodule
113 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
114 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
115 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
116 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
117 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
118 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
119 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
120 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
121 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
122 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
123 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
124 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
125 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
126 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
127 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
128 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
129 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
130 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
131 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
132 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
133 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
134 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
135 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
136 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
137 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
138 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
139 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
140 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
141 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
142 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
143 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
144 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
145 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
146 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
147 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
148 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
149 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
150 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
151 2842733646 Variovorax sp. R-72446 Isolate Unclassified
152 2844163670 Ensifer sp. 1H6 Isolate Unclassified
153 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
154 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
155 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
156 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
157 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
158 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
159 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
160 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
161 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
162 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
163 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
164 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
165 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
166 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
167 2933599457 Rhizobium phaseoli M3 Isolate Nodule
168 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
169 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
170 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
171 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
172 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
173 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
174 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
175 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
176 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
177 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
178 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
179 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
180 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
181 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
182 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
183 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
184 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
185 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
186 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
187 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
188 2996893221 Rhizobium sp. R635 Isolate Nodule
189 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
190 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
191 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
192 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
193 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
194 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
195 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
196 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
197 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
198 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
199 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
200 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
201 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
202 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
203 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
204 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
205 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
206 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
207 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
208 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
209 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
210 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
211 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
212 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
213 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
214 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
215 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
216 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
217 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
218 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
219 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
220 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
221 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
222 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
223 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
224 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
225 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
226 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
227 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
228 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
229 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
230 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
231 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
232 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
233 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
234 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
235 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
236 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
237 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
238 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
239 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
240 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
241 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
242 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
243 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
244 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
245 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
246 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
247 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
248 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
249 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
250 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
251 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
252 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
253 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
254 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
255 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
256 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
257 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
258 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
259 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
260 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
261 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
262 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
263 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
264 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
265 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
266 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
267 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
268 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
269 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
270 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
271 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
272 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
273 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
274 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
275 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
276 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
277 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
278 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
279 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
280 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
281 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
282 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
283 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
284 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
285 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
286 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
287 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
288 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
289 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
290 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
291 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
292 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
293 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
294 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
295 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
296 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
297 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
298 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
299 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
300 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
301 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
302 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
303 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
304 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
305 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
306 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
307 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
308 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
309 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
310 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
311 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
312 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
313 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
314 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
315 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
316 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
317 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
318 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
319 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
320 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
321 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
322 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
323 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
324 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
325 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
326 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
327 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
328 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
329 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
330 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
331 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
332 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
333 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
334 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
335 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
336 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
337 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
338 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
339 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
340 8005382845 Rhizobium sp. R634 Isolate Nodule
341 8005395548 Rhizobium sp. R339 Isolate Nodule
342 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
343 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
344 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
345 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
346 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
347 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
348 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
349 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
350 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
351 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
352 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
353 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
354 8024501048 Rhizobium sp. H4 Isolate Nodule
355 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
356 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
357 8056382006 Rhizobium croatiense 13T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 51.8
Metatranscriptomes 0
Isolates 48.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.99
Nodule 35.36
Rhizoplane 1.58
Rhizosphere 27.03
Stem 0
Stem Tuber 0
Unclassified 20.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1001526 3300002739 Bacteria 4026
2 JGI25152J39213_1000862 3300002773 Bacteria 14971
3 JGI25150J39212_1000181 3300002774 Bacteria 35419
4 JGI25159J45721_1000050 3300002987 Bacteria 57206
5 JGI25151J46595_10000081 3300003187 Bacteria 131317
6 JGI25151J46595_10005189 3300003187 Bacteria 6756
7 JGI25151J46595_10011506 3300003187 Bacteria 4064
8 JGI25153J46596_10000529 3300003215 Bacteria 24000
9 JGI25160J50197_1000097 3300003354 Bacteria 87619
10 Ga0055526_1000756 3300003771 Bacteria 24169
11 Ga0055526_1003103 3300003771 Bacteria 10784
12 Ga0055524_1001434 3300003775 Bacteria 13695
13 Ga0055524_1003855 3300003775 Bacteria 7114
14 Ga0055524_1017600 3300003775 Bacteria 2517
15 Ga0055524_1029501 3300003775 Bacteria 1620
16 Ga0055528_1001670 3300003790 Bacteria 12986
17 Ga0055528_1011470 3300003790 Bacteria 3514
18 Ga0055540_1013368 3300003792 Bacteria 2511
19 Ga0055543_1000610 3300004625 Bacteria 19295
20 Ga0055543_1002487 3300004625 Bacteria 6064
21 Ga0065165_1000427 3300005262 Bacteria 66083
22 Ga0065165_1006753 3300005262 Bacteria 5875
23 Ga0070659_100041387 3300005366 Bacteria 3602
24 Ga0070706_100135582 3300005467 Bacteria 2298
25 Ga0070695_100023516 3300005545 Bacteria 3788
26 Ga0075365_10021715 3300006038 Bacteria 4009
27 Ga0075362_10015309 3300006177 Bacteria 3117
28 Ga0075367_10006345 3300006178 Bacteria 5964
29 Ga0075367_10008051 3300006178 Bacteria 5436
30 Ga0079104_1001906 3300006946 Bacteria 12584
31 Ga0105251_10030800 3300009011 Bacteria 2690
32 Ga0105240_10000013 3300009093 Bacteria 483458
33 Ga0111539_10005602 3300009094 Bacteria 16241
34 Ga0105248_10218482 3300009177 Bacteria 2146
35 Ga0105237_10000714 3300009545 Bacteria 45945
36 Ga0105249_10166719 3300009553 Bacteria 2133
37 Ga0123341_1000020 3300009765 Bacteria 79523
38 Ga0123342_1027357 3300009766 Bacteria 3200
39 Ga0157314_1001726 3300012500 Bacteria 1533
40 Ga0157370_10000209 3300013104 Bacteria 74351
41 Ga0157370_10018118 3300013104 Bacteria 7089
42 Ga0171463_1004 3300013249 Bacteria 437207
43 Ga0182008_10011122 3300014497 Bacteria 4800
44 Ga0182008_10016430 3300014497 Bacteria 3845
45 Ga0183363_1024 3300015690 Bacteria 54122
46 Ga0214544_1002560 3300021320 Bacteria 38129
47 Ga0214542_1000008 3300021321 Bacteria 278895
48 Ga0214543_1000031 3300021327 Bacteria 206436
49 Ga0214543_1000053 3300021327 Bacteria 141797
50 Ga0228711_1003012 3300022739 Bacteria 26140
51 Ga0228710_1003154 3300022740 Bacteria 26273
52 Ga0207425_1000034 3300025245 Bacteria 227886
53 Ga0209677_100297 3300025253 Bacteria 32532
54 Ga0209129_1000094 3300025258 Bacteria 172051
55 Ga0209129_1000935 3300025258 Bacteria 17616
56 Ga0209233_1000440 3300025261 Bacteria 28932
57 Ga0209673_1000283 3300025273 Bacteria 94995
58 Ga0209673_1002912 3300025273 Bacteria 10800
59 Ga0209673_1007164 3300025273 Bacteria 5207
60 Ga0209130_1000027 3300025284 Bacteria 327700
61 Ga0209675_1020321 3300025291 Bacteria 1803
62 Ga0209025_1000184 3300025294 Bacteria 155611
63 Ga0209025_1002498 3300025294 Bacteria 19294
64 Ga0209025_1016784 3300025294 Bacteria 4285
65 Ga0209564_1000111 3300025295 Bacteria 212210
66 Ga0209564_1001187 3300025295 Bacteria 30010
67 Ga0209564_1002316 3300025295 Bacteria 15447
68 Ga0209758_1000159 3300025297 Bacteria 155588
69 Ga0209758_1004552 3300025297 Bacteria 11449
70 Ga0209256_1000132 3300025299 Bacteria 160806
71 Ga0209256_1001004 3300025299 Bacteria 33460
72 Ga0209256_1001025 3300025299 Bacteria 32812
73 Ga0209256_1003992 3300025299 Bacteria 9671
74 Ga0209256_1011165 3300025299 Bacteria 3631
75 Ga0207426_1000072 3300025302 Bacteria 327700
76 Ga0207426_1000384 3300025302 Bacteria 75904
77 Ga0207426_1000884 3300025302 Bacteria 30977
78 Ga0209051_1003274 3300025303 Bacteria 10745
79 Ga0209051_1031008 3300025303 Bacteria 2064
80 Ga0209257_1011560 3300025304 Bacteria 4230
81 Ga0207684_10017157 3300025910 Bacteria 6214
82 Ga0207695_10000044 3300025913 Bacteria 440819
83 Ga0207671_10000364 3300025914 Bacteria 64550
84 Ga0207664_10006627 3300025929 Bacteria 7977
85 Ga0207690_10019843 3300025932 Bacteria 4144
86 Ga0207712_10056229 3300025961 Bacteria 2771
87 Ga0209281_1000596 3300027111 Bacteria 41157
88 Ga0209282_1000267 3300027666 Bacteria 26143
89 Ga0307515_10002407 3300028794 Bacteria 40813
90 Ga0307515_10122319 3300028794 Bacteria 2936
91 Ga0265328_10000626 3300031239 Bacteria 16367
92 Ga0265331_10000115 3300031250 Bacteria 105212
93 Ga0265327_10000045 3300031251 Bacteria 282880
94 Ga0265327_10000293 3300031251 Bacteria 96862
95 Ga0307406_10050205 3300031901 Bacteria 2643
96 Ga0315914_1000965 3300031967 Bacteria 40741
97 Ga0315913_1000276 3300033430 Bacteria 40740
98 Ga0315915_1000499 3300033464 Bacteria 40728
99 Ga0395905_0000836 3300037471 Bacteria 40186
100 Ga0395905_0052107 3300037471 Bacteria 3832
101 Ga0395901_0036890 3300038443 Bacteria 5054
102 Ga0400483_039696 3300039062 Bacteria 2455
103 Ga0495592_0059538 3300046454 Bacteria 2812
104 Ga0495629_0016169 3300046459 Bacteria 5356
105 Ga0495651_0128394 3300046462 Bacteria 1854
106 Ga0495664_0076456 3300046477 Bacteria 2004
107 Ga0495585_0046271 3300046492 Bacteria 2427
108 Ga0495607_0066808 3300046501 Bacteria 2022
109 Ga0495583_0008967 3300046506 Bacteria 6032
110 Ga0495610_0000915 3300046512 Bacteria 27419
111 Ga0495620_0011830 3300046515 Bacteria 4537
112 Ga0495620_0040507 3300046515 Bacteria 2049
113 Ga0495631_0055904 3300046518 Bacteria 1719
114 Ga0495632_0001194 3300046519 Bacteria 22047
115 Ga0495632_0036567 3300046519 Bacteria 2497
116 Ga0495643_0039337 3300046522 Bacteria 2587
117 Ga0495648_0064663 3300046524 Bacteria 2154
118 Ga0495640_0116216 3300046533 Bacteria 1742
119 Ga0495625_0056919 3300046660 Bacteria 2782
120 Ga0495625_0089337 3300046660 Bacteria 2133
121 Ga0495588_0038401 3300046674 Bacteria 2435
122 Ga0495600_0023661 3300046809 Bacteria 3952
123 Ga0495604_0030545 3300047317 Bacteria 4278
124 Ga0495687_023369 3300047443 Bacteria 2953
125 Ga0495673_0067124 3300047469 Bacteria 1519
126 Ga0495673_0072370 3300047469 Bacteria 1447
127 Ga0495686_0000922 3300047472 Bacteria 36620
128 Ga0495686_0071889 3300047472 Bacteria 2128
129 Ga0496102_0136972 3300048905 Bacteria 2294
130 Ga0496106_0001858 3300048909 Bacteria 15804
131 Ga0496108_0197183 3300048911 Bacteria 1746
132 Ga0496109_0135321 3300048912 Bacteria 2302
133 Ga0496111_0157358 3300048914 Bacteria 1686
134 Ga0496114_0230644 3300048917 Bacteria 1626
135 Ga0496116_0004572 3300048919 Bacteria 13124
136 Ga0496116_0036635 3300048919 Bacteria 3429
137 Ga0496116_0052882 3300048919 Bacteria 2686
138 Ga0496116_0078599 3300048919 Bacteria 2056
139 Ga0496116_0135117 3300048919 Bacteria 1398
140 Ga0496117_0001675 3300048920 Bacteria 30978
141 Ga0496117_0003875 3300048920 Bacteria 17001
142 Ga0496117_0006523 3300048920 Bacteria 11755
143 Ga0496117_0030887 3300048920 Bacteria 4101
144 Ga0496117_0108934 3300048920 Bacteria 1731
145 Ga0496118_0002290 3300048921 Bacteria 26056
146 Ga0496118_0013532 3300048921 Bacteria 7708
147 Ga0496118_0044424 3300048921 Bacteria 3479
148 Ga0496118_0055208 3300048921 Bacteria 3000
149 Ga0496119_0021204 3300048922 Bacteria 4705
150 Ga0496120_0020634 3300048923 Bacteria 4179
151 Ga0496121_0000034 3300048924 Bacteria 377095
152 Ga0496121_0041943 3300048924 Bacteria 3989
153 Ga0496121_0049082 3300048924 Bacteria 3583
154 Ga0496121_0122752 3300048924 Bacteria 1958
155 Ga0496122_0000428 3300048925 Bacteria 88816
156 Ga0496122_0003156 3300048925 Bacteria 22048
157 Ga0496122_0051268 3300048925 Bacteria 3137
158 Ga0496122_0090403 3300048925 Bacteria 2089
159 Ga0496122_0138071 3300048925 Bacteria 1531
160 Ga0496123_0000890 3300048926 Bacteria 47301
161 Ga0496123_0034170 3300048926 Bacteria 3646
162 Ga0496123_0039450 3300048926 Bacteria 3303
163 Ga0496123_0064509 3300048926 Bacteria 2333
164 Ga0496124_0001790 3300048927 Bacteria 29882
165 Ga0496124_0010851 3300048927 Bacteria 9172
166 Ga0496124_0052615 3300048927 Bacteria 3458
167 Ga0496124_0055598 3300048927 Bacteria 3344
168 Ga0496124_0093219 3300048927 Bacteria 2451
169 Ga0496125_0000030 3300048928 Bacteria 375023
170 Ga0496125_0006012 3300048928 Bacteria 13278
171 Ga0496126_0132352 3300048929 Bacteria 2154
172 Ga0501031_0014582 3300049568 Bacteria 5109
173 Ga0501032_0000694 3300049569 Bacteria 27376
174 Ga0501032_0002186 3300049569 Bacteria 15387
175 Ga0501032_0112102 3300049569 Bacteria 1804
176 Ga0501033_0000119 3300049570 Bacteria 75685
177 Ga0501033_0000361 3300049570 Bacteria 43373
178 Ga0501033_0001238 3300049570 Bacteria 22931
179 Ga0501033_0005514 3300049570 Bacteria 10011
180 Ga0501034_0026528 3300049571 Bacteria 5900
181 Ga0501034_0321784 3300049571 Bacteria 1479
182 Ga0501036_0002607 3300049572 Bacteria 14218
183 Ga0501036_0023381 3300049572 Bacteria 5206
184 Ga0501037_0031163 3300049573 Bacteria 3937
185 Ga0501037_0105280 3300049573 Bacteria 2033
186 Ga0501038_0009181 3300049574 Bacteria 9075
187 Ga0501038_0024086 3300049574 Bacteria 5432
188 Ga0501038_0033219 3300049574 Bacteria 4545
189 Ga0501038_0056878 3300049574 Bacteria 3359
190 Ga0501039_0008015 3300049575 Bacteria 8049
191 Ga0501040_0010460 3300049576 Bacteria 6067
192 Ga0501042_0000683 3300049578 Bacteria 18346
193 Ga0501043_0022257 3300049579 Bacteria 4972
194 Ga0501043_0027673 3300049579 Bacteria 4450
195 Ga0501043_0082853 3300049579 Bacteria 2521
196 Ga0501043_0085649 3300049579 Bacteria 2476
197 Ga0501046_0021950 3300049580 Bacteria 5261
198 Ga0501047_0256811 3300049581 Bacteria 1595
199 Ga0501048_0006382 3300049582 Bacteria 8963
200 Ga0501068_0004570 3300049584 Bacteria 7526
201 Ga0501070_0248856 3300049586 Bacteria 1454
202 Ga0501073_0071170 3300049589 Bacteria 2424
203 Ga0501080_0188777 3300049742 Bacteria 1894
204 Ga0501035_0000790 3300049822 Bacteria 33779
205 Ga0501035_0001173 3300049822 Bacteria 27300
206 Ga0501035_0035326 3300049822 Bacteria 4536
207 Ga0501035_0057285 3300049822 Bacteria 3474
208 Ga0501044_0000093 3300049823 Bacteria 109832
209 Ga0501044_0019353 3300049823 Bacteria 7285
210 Ga0501044_0037368 3300049823 Bacteria 5076
211 Ga0501045_0001338 3300049824 Bacteria 16334
212 nmdc:mga00v17_4554_c1 3300050491 Bacteria 7222
213 nmdc:mga0yw44_18895_c1 3300050492 Bacteria 3787
214 nmdc:mga04h51_48142_c1 3300050495 Bacteria 1419
215 nmdc:mga08y16_35609_c1 3300050511 Bacteria 5227
216 Ga0500608_016292 3300053122 Bacteria 3355
217 Ga0500618_000241 3300053125 Bacteria 43403
218 Ga0500618_009573 3300053125 Bacteria 2638
219 Ga0500559_0003811 3300053136 Bacteria 7302
220 Ga0500559_0013844 3300053136 Bacteria 3411
221 Ga0500559_0070619 3300053136 Bacteria 1571
222 Ga0500568_0000282 3300053139 Bacteria 42149
223 Ga0500573_0000126 3300053140 Bacteria 29747
224 Ga0500573_0016189 3300053140 Bacteria 4230
225 Ga0500573_0027795 3300053140 Bacteria 3254
226 Ga0500590_001068 3300053148 Bacteria 10750
227 Ga0500604_0003896 3300053151 Bacteria 3987
228 Ga0500633_0000619 3300053160 Bacteria 5873
229 Ga0501084_0021458 3300054114 Bacteria 5383
230 Ga0530510_0035418 3300061734 Bacteria 3597

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049579 Ga0501043_0082853 Ga0501043_0082853_58_1113 340
2 3300049581 Ga0501047_0256811 Ga0501047_0256811_483_1538 340
3 3300049586 Ga0501070_0248856 Ga0501070_0248856_351_1406 340
4 3300053136 Ga0500559_0070619 Ga0500559_0070619_85_1275 354
5 3300048927 Ga0496124_0055598 Ga0496124_0055598_1911_3101 355
6 3300048925 Ga0496122_0000428 Ga0496122_0000428_60540_61730 357
7 3300048926 Ga0496123_0000890 Ga0496123_0000890_19028_20218 357
8 3300046506 Ga0495583_0008967 Ga0495583_0008967_100_1275 373
9 3300047469 Ga0495673_0072370 Ga0495673_0072370_193_1368 373
10 3300049570 Ga0501033_0000361 Ga0501033_0000361_11430_12614 373
11 3300049822 Ga0501035_0001173 Ga0501035_0001173_5957_7141 373
12 3300037471 Ga0395905_0052107 Ga0395905_0052107_1194_2372 377
13 3300005467 Ga0070706_100135582 Ga0070706_1001355822 381
14 3300005545 Ga0070695_100023516 Ga0070695_1000235163 381
15 3300025910 Ga0207684_10017157 Ga0207684_100171572 381
16 3300039062 Ga0400483_039696 Ga0400483_039696_936_2084 381
17 3300054114 Ga0501084_0021458 Ga0501084_0021458_3242_4417 381
18 3300061734 Ga0530510_0035418 Ga0530510_0035418_434_1600 381
19 iso_pu_bacteria 2995392953 2995395330 381
20 iso_pu_bacteria 2837651117 2837653924 382
21 iso_pu_bacteria 2891048133 2891050520 382
22 3300014497 Ga0182008_10011122 Ga0182008_100111224 383
23 iso_pu_bacteria 2929138655 2929141770 383
24 3300005366 Ga0070659_100041387 Ga0070659_1000413872 384
25 3300009094 Ga0111539_10005602 Ga0111539_1000560210 384
26 3300013104 Ga0157370_10018118 Ga0157370_100181182 384
27 3300025929 Ga0207664_10006627 Ga0207664_100066276 384
28 3300025932 Ga0207690_10019843 Ga0207690_100198432 384
29 3300028794 Ga0307515_10122319 Ga0307515_101223192 384
30 3300031239 Ga0265328_10000626 Ga0265328_1000062612 384
31 3300031250 Ga0265331_10000115 Ga0265331_1000011531 384
32 3300031251 Ga0265327_10000045 Ga0265327_1000004573 384
33 3300038443 Ga0395901_0036890 Ga0395901_0036890_703_1890 384
34 3300048911 Ga0496108_0197183 Ga0496108_0197183_444_1631 384
35 3300048912 Ga0496109_0135321 Ga0496109_0135321_1039_2226 384
36 3300048914 Ga0496111_0157358 Ga0496111_0157358_441_1628 384
37 3300048917 Ga0496114_0230644 Ga0496114_0230644_46_1233 384
38 3300049568 Ga0501031_0014582 Ga0501031_0014582_643_1830 384
39 3300049569 Ga0501032_0000694 Ga0501032_0000694_5293_6480 384
40 3300049569 Ga0501032_0002186 Ga0501032_0002186_9147_10334 384
41 3300049569 Ga0501032_0112102 Ga0501032_0112102_560_1747 384
42 3300049570 Ga0501033_0000119 Ga0501033_0000119_70325_71512 384
43 3300049570 Ga0501033_0001238 Ga0501033_0001238_1427_2614 384
44 3300049570 Ga0501033_0005514 Ga0501033_0005514_644_1831 384
45 3300049571 Ga0501034_0026528 Ga0501034_0026528_1564_2751 384
46 3300049572 Ga0501036_0002607 Ga0501036_0002607_9443_10630 384
47 3300049572 Ga0501036_0023381 Ga0501036_0023381_987_2174 384
48 3300049573 Ga0501037_0031163 Ga0501037_0031163_68_1255 384
49 3300049573 Ga0501037_0105280 Ga0501037_0105280_123_1310 384
50 3300049574 Ga0501038_0009181 Ga0501038_0009181_4869_6056 384
51 3300049574 Ga0501038_0024086 Ga0501038_0024086_4053_5240 384
52 3300049574 Ga0501038_0033219 Ga0501038_0033219_129_1316 384
53 3300049575 Ga0501039_0008015 Ga0501039_0008015_4668_5855 384
54 3300049576 Ga0501040_0010460 Ga0501040_0010460_4399_5586 384
55 3300049578 Ga0501042_0000683 Ga0501042_0000683_535_1722 384
56 3300049579 Ga0501043_0022257 Ga0501043_0022257_3434_4621 384
57 3300049579 Ga0501043_0027673 Ga0501043_0027673_1619_2806 384
58 3300049579 Ga0501043_0085649 Ga0501043_0085649_1074_2261 384
59 3300049580 Ga0501046_0021950 Ga0501046_0021950_2511_3698 384
60 3300049582 Ga0501048_0006382 Ga0501048_0006382_2584_3771 384
61 3300049584 Ga0501068_0004570 Ga0501068_0004570_5261_6448 384
62 3300049822 Ga0501035_0000790 Ga0501035_0000790_26617_27804 384
63 3300049822 Ga0501035_0035326 Ga0501035_0035326_555_1742 384
64 3300049822 Ga0501035_0057285 Ga0501035_0057285_190_1377 384
65 3300049823 Ga0501044_0000093 Ga0501044_0000093_47600_48787 384
66 3300049823 Ga0501044_0019353 Ga0501044_0019353_5958_7145 384
67 3300049823 Ga0501044_0037368 Ga0501044_0037368_1960_3147 384
68 3300049824 Ga0501045_0001338 Ga0501045_0001338_9831_11018 384
69 3300050511 nmdc:mga08y16_35609_c1 nmdc:mga08y16_35609_c1_3790_4977 384
70 iso_pu_bacteria 2643221558 2643813640 384
71 iso_pu_bacteria 2842733646 2842734801 384
72 iso_pu_bacteria 8018150411 8018154502 384
73 iso_pu_bacteria 2913295892 2913300004 385
74 3300003187 JGI25151J46595_10011506 JGI25151J46595_100115062 386
75 3300037471 Ga0395905_0000836 Ga0395905_0000836_26314_27492 386
76 3300053122 Ga0500608_016292 Ga0500608_016292_17_1192 386
77 3300053136 Ga0500559_0013844 Ga0500559_0013844_1892_3082 386
78 3300053140 Ga0500573_0016189 Ga0500573_0016189_1738_2928 386
79 iso_pu_bacteria 2508501122 2509109407 386
80 iso_pu_bacteria 2509276033 2509446037 386
81 iso_pu_bacteria 2516143018 2516205447 386
82 iso_pu_bacteria 2558860100 2558867233 386
83 iso_pu_bacteria 2558860100 2558868459 386
84 iso_pu_bacteria 2643221643 2644240612 386
85 iso_pu_bacteria 2657244999 2657682581 386
86 iso_pu_bacteria 2791355082 2792582065 386
87 iso_pu_bacteria 2791355259 2793313532 386
88 iso_pu_bacteria 2802429268 2804753529 386
89 iso_pu_bacteria 3005409236 3005409519 386
90 iso_pu_bacteria 8049293176 8049296093 386
91 3300048919 Ga0496116_0052882 Ga0496116_0052882_232_1413 387
92 3300048924 Ga0496121_0000034 Ga0496121_0000034_324591_325772 387
93 3300048926 Ga0496123_0039450 Ga0496123_0039450_278_1459 387
94 3300048928 Ga0496125_0000030 Ga0496125_0000030_48752_49933 387
95 iso_pu_bacteria 2510917022 2511132024 387
96 iso_pu_bacteria 2510917028 2511182287 387
97 iso_pu_bacteria 2512875026 2512973778 387
98 iso_pu_bacteria 2513237089 2513606756 387
99 iso_pu_bacteria 2513237156 2513987454 387
100 iso_pu_bacteria 2513237160 2514008367 387
101 iso_pu_bacteria 2515154107 2515610880 387
102 iso_pu_bacteria 2517487022 2517571220 387
103 iso_pu_bacteria 2519899620 2520379625 387
104 iso_pu_bacteria 2524023209 2524458342 387
105 iso_pu_bacteria 2534681796 2535518902 387
106 iso_pu_bacteria 2582581283 2585166863 387
107 iso_pu_bacteria 2582581294 2585201854 387
108 iso_pu_bacteria 2582581299 2585233949 387
109 iso_pu_bacteria 2582581306 2585266782 387
110 iso_pu_bacteria 2582581308 2585280600 387
111 iso_pu_bacteria 2582581315 2585327974 387
112 iso_pu_bacteria 2582581316 2585334281 387
113 iso_pu_bacteria 2582581865 2585387823 387
114 iso_pu_bacteria 2582581867 2585403718 387
115 iso_pu_bacteria 2585427527 2585531537 387
116 iso_pu_bacteria 2585427528 2585540629 387
117 iso_pu_bacteria 2585427530 2585551517 387
118 iso_pu_bacteria 2585427590 2585824112 387
119 iso_pu_bacteria 2585427593 2585838898 387
120 iso_pu_bacteria 2585427594 2585844692 387
121 iso_pu_bacteria 2615840624 2616296437 387
122 iso_pu_bacteria 2615840626 2616306854 387
123 iso_pu_bacteria 2643221557 2643808235 387
124 iso_pu_bacteria 2643221599 2644002264 387
125 iso_pu_bacteria 2643221607 2644051900 387
126 iso_pu_bacteria 2643221610 2644068576 387
127 iso_pu_bacteria 2643221618 2644109979 387
128 iso_pu_bacteria 2643221626 2644150255 387
129 iso_pu_bacteria 2643221634 2644195242 387
130 iso_pu_bacteria 2643221636 2644201543 387
131 iso_pu_bacteria 2643221655 2644312859 387
132 iso_pu_bacteria 2643221659 2644336405 387
133 iso_pu_bacteria 2643221668 2644379669 387
134 iso_pu_bacteria 2643221675 2644419645 387
135 iso_pu_bacteria 2643221680 2644453002 387
136 iso_pu_bacteria 2643221686 2644484353 387
137 iso_pu_bacteria 2643221689 2644499916 387
138 iso_pu_bacteria 2643221698 2644546053 387
139 iso_pu_bacteria 2643221712 2644618589 387
140 iso_pu_bacteria 2643221726 2644688969 387
141 iso_pu_bacteria 2690316117 2692320136 387
142 iso_pu_bacteria 2718217882 2719182839 387
143 iso_pu_bacteria 2718217997 2719667178 387
144 iso_pu_bacteria 2718218009 2719733556 387
145 iso_pu_bacteria 2718218199 2720493598 387
146 iso_pu_bacteria 2718218232 2720615054 387
147 iso_pu_bacteria 2718218233 2720621847 387
148 iso_pu_bacteria 2718218235 2720633197 387
149 iso_pu_bacteria 2718218269 2720776894 387
150 iso_pu_bacteria 2718218363 2721148951 387
151 iso_pu_bacteria 2718218365 2721160349 387
152 iso_pu_bacteria 2718218366 2721165764 387
153 iso_pu_bacteria 2721755514 2722841934 387
154 iso_pu_bacteria 2721755556 2723028494 387
155 iso_pu_bacteria 2721755684 2723562098 387
156 iso_pu_bacteria 2721755685 2723568800 387
157 iso_pu_bacteria 2721755810 2724046312 387
158 iso_pu_bacteria 2721755819 2724091501 387
159 iso_pu_bacteria 2721755822 2724106065 387
160 iso_pu_bacteria 2721755823 2724111870 387
161 iso_pu_bacteria 2728369352 2730109430 387
162 iso_pu_bacteria 2728369365 2730166074 387
163 iso_pu_bacteria 2728369397 2730299981 387
164 iso_pu_bacteria 2738541293 2738803916 387
165 iso_pu_bacteria 2738541333 2739038788 387
166 iso_pu_bacteria 2751185821 2753459111 387
167 iso_pu_bacteria 2791355256 2793299401 387
168 iso_pu_bacteria 2791355260 2793325032 387
169 iso_pu_bacteria 2791355261 2793331977 387
170 iso_pu_bacteria 2791355262 2793332106 387
171 iso_pu_bacteria 2791355264 2793346476 387
172 iso_pu_bacteria 2791355265 2793354000 387
173 iso_pu_bacteria 2791355266 2793359523 387
174 iso_pu_bacteria 2802428858 2802721550 387
175 iso_pu_bacteria 2802428859 2802728438 387
176 iso_pu_bacteria 2802428860 2802734435 387
177 iso_pu_bacteria 2802428861 2802741074 387
178 iso_pu_bacteria 2802428862 2802747192 387
179 iso_pu_bacteria 2802428863 2802753898 387
180 iso_pu_bacteria 2802429605 2805926085 387
181 iso_pu_bacteria 2802429606 2805937034 387
182 iso_pu_bacteria 2802429633 2806048667 387
183 iso_pu_bacteria 2802429634 2806056625 387
184 iso_pu_bacteria 2802429635 2806063890 387
185 iso_pu_bacteria 2802429636 2806070830 387
186 iso_pu_bacteria 2802429637 2806077538 387
187 iso_pu_bacteria 2818991453 2819638947 387
188 iso_pu_bacteria 2838016132 2838018466 387
189 iso_pu_bacteria 2838022645 2838024145 387
190 iso_pu_bacteria 2838048938 2838053684 387
191 iso_pu_bacteria 2838061910 2838062440 387
192 iso_pu_bacteria 2838068647 2838071991 387
193 iso_pu_bacteria 2838074704 2838078345 387
194 iso_pu_bacteria 2838668709 2838672946 387
195 iso_pu_bacteria 2838680041 2838684022 387
196 iso_pu_bacteria 2838694306 2838698551 387
197 iso_pu_bacteria 2838701080 2838705576 387
198 iso_pu_bacteria 2838707686 2838711666 387
199 iso_pu_bacteria 2842077413 2842081467 387
200 iso_pu_bacteria 2842118031 2842121756 387
201 iso_pu_bacteria 2842146304 2842149906 387
202 iso_pu_bacteria 2842192696 2842195015 387
203 iso_pu_bacteria 2842198810 2842201739 387
204 iso_pu_bacteria 2842205361 2842207278 387
205 iso_pu_bacteria 2842237096 2842240771 387
206 iso_pu_bacteria 2842250916 2842255256 387
207 iso_pu_bacteria 2842264693 2842269044 387
208 iso_pu_bacteria 2842278818 2842281011 387
209 iso_pu_bacteria 2842285085 2842288376 387
210 iso_pu_bacteria 2842291075 2842295124 387
211 iso_pu_bacteria 2842298080 2842300402 387
212 iso_pu_bacteria 2842311132 2842311278 387
213 iso_pu_bacteria 2842317721 2842320979 387
214 iso_pu_bacteria 2842357229 2842361081 387
215 iso_pu_bacteria 2842370503 2842374858 387
216 iso_pu_bacteria 2842377471 2842381523 387
217 iso_pu_bacteria 2842384541 2842388593 387
218 iso_pu_bacteria 2842402390 2842406278 387
219 iso_pu_bacteria 2842409023 2842412863 387
220 iso_pu_bacteria 2842415677 2842419258 387
221 iso_pu_bacteria 2842422224 2842425623 387
222 iso_pu_bacteria 2842428310 2842433263 387
223 iso_pu_bacteria 2842434925 2842439689 387
224 iso_pu_bacteria 2842441272 2842446232 387
225 iso_pu_bacteria 2842447887 2842448913 387
226 iso_pu_bacteria 2842462802 2842467427 387
227 iso_pu_bacteria 2842469257 2842474078 387
228 iso_pu_bacteria 2842489311 2842491031 387
229 iso_pu_bacteria 2842495871 2842498369 387
230 iso_pu_bacteria 2844163670 2844164172 387
231 iso_pu_bacteria 2847417321 2847420654 387
232 iso_pu_bacteria 2848992105 2848995485 387
233 iso_pu_bacteria 2855872281 2855878013 387
234 iso_pu_bacteria 2896384573 2896388048 387
235 iso_pu_bacteria 2915980308 2915984940 387
236 iso_pu_bacteria 2916061851 2916066849 387
237 iso_pu_bacteria 2920760137 2920760527 387
238 iso_pu_bacteria 2920822456 2920825764 387
239 iso_pu_bacteria 2921250672 2921255611 387
240 iso_pu_bacteria 2933599457 2933603155 387
241 iso_pu_bacteria 2935894831 2935897800 387
242 iso_pu_bacteria 2937029754 2937034287 387
243 iso_pu_bacteria 2937036028 2937040955 387
244 iso_pu_bacteria 2937078374 2937083085 387
245 iso_pu_bacteria 2937084907 2937086758 387
246 iso_pu_bacteria 2941499720 2941501170 387
247 iso_pu_bacteria 2957375807 2957380409 387
248 iso_pu_bacteria 2957437181 2957443212 387
249 iso_pu_bacteria 2960591022 2960595791 387
250 iso_pu_bacteria 2960631154 2960634841 387
251 iso_pu_bacteria 2960680706 2960685495 387
252 iso_pu_bacteria 2960693952 2960700006 387
253 iso_pu_bacteria 2967686174 2967691062 387
254 iso_pu_bacteria 2967728569 2967733454 387
255 iso_pu_bacteria 2970026789 2970032319 387
256 iso_pu_bacteria 2970122695 2970127482 387
257 iso_pu_bacteria 2970143518 2970148270 387
258 iso_pu_bacteria 2977530762 2977535951 387
259 iso_pu_bacteria 2977544691 2977551014 387
260 iso_pu_bacteria 2996893221 2996896046 387
261 iso_pu_bacteria 3005452660 3005455727 387
262 iso_pu_bacteria 643692032 643827256 387
263 iso_pu_bacteria 8003999396 8004002879 387
264 iso_pu_bacteria 8005282627 8005286882 387
265 iso_pu_bacteria 8005289223 8005292110 387
266 iso_pu_bacteria 8005301065 8005305834 387
267 iso_pu_bacteria 8005382845 8005387902 387
268 iso_pu_bacteria 8005395548 8005400940 387
269 iso_pu_bacteria 8005430974 8005433718 387
270 iso_pu_bacteria 8005497431 8005497540 387
271 iso_pu_bacteria 8005542996 8005546552 387
272 iso_pu_bacteria 8005570704 8005576681 387
273 iso_pu_bacteria 8005619151 8005623273 387
274 iso_pu_bacteria 8005626139 8005629737 387
275 iso_pu_bacteria 8005658619 8005660708 387
276 iso_pu_bacteria 8005668836 8005668945 387
277 iso_pu_bacteria 8005688590 8005690055 387
278 iso_pu_bacteria 8018127388 8018130662 387
279 iso_pu_bacteria 8024486573 8024490734 387
280 iso_pu_bacteria 8024501048 8024502458 387
281 iso_pu_bacteria 8055431914 8055435654 387
282 iso_pu_bacteria 8056382006 8056383938 387
283 3300031251 Ga0265327_10000293 Ga0265327_1000029398 388
284 3300021320 Ga0214544_1002560 Ga0214544_100256023 389
285 3300021321 Ga0214542_1000008 Ga0214542_1000008259 389
286 3300021327 Ga0214543_1000031 Ga0214543_1000031190 389
287 3300050491 nmdc:mga00v17_4554_c1 nmdc:mga00v17_4554_c1_5740_6909 389
288 iso_pu_bacteria 2738541317 2738947523 389
289 iso_pu_bacteria 2913308742 2913312431 389
290 3300009765 Ga0123341_1000020 Ga0123341_100002066 390
291 3300009766 Ga0123342_1027357 Ga0123342_10273574 390
292 3300021327 Ga0214543_1000053 Ga0214543_100005315 390
293 iso_pu_bacteria 2509276019 2509378283 390
294 iso_pu_bacteria 2850079185 2850082467 390
295 3300002773 JGI25152J39213_1000862 JGI25152J39213_10008625 391
296 3300002774 JGI25150J39212_1000181 JGI25150J39212_100018114 391
297 3300003187 JGI25151J46595_10005189 JGI25151J46595_100051897 391
298 3300003771 Ga0055526_1003103 Ga0055526_10031038 391
299 3300003775 Ga0055524_1003855 Ga0055524_10038555 391
300 3300003775 Ga0055524_1017600 Ga0055524_10176002 391
301 3300003790 Ga0055528_1001670 Ga0055528_10016708 391
302 3300003790 Ga0055528_1011470 Ga0055528_10114702 391
303 3300003792 Ga0055540_1013368 Ga0055540_10133682 391
304 3300004625 Ga0055543_1002487 Ga0055543_10024872 391
305 3300005262 Ga0065165_1006753 Ga0065165_10067534 391
306 3300006038 Ga0075365_10021715 Ga0075365_100217152 391
307 3300006177 Ga0075362_10015309 Ga0075362_100153095 391
308 3300006178 Ga0075367_10006345 Ga0075367_100063452 391
309 3300006178 Ga0075367_10008051 Ga0075367_100080516 391
310 3300006946 Ga0079104_1001906 Ga0079104_10019069 391
311 3300009011 Ga0105251_10030800 Ga0105251_100308002 391
312 3300009093 Ga0105240_10000013 Ga0105240_1000001392 391
313 3300009177 Ga0105248_10218482 Ga0105248_102184822 391
314 3300009545 Ga0105237_10000714 Ga0105237_100007144 391
315 3300009553 Ga0105249_10166719 Ga0105249_101667192 391
316 3300012500 Ga0157314_1001726 Ga0157314_10017261 391
317 3300013104 Ga0157370_10000209 Ga0157370_1000020942 391
318 3300014497 Ga0182008_10016430 Ga0182008_100164302 391
319 3300015690 Ga0183363_1024 Ga0183363_102432 391
320 3300022739 Ga0228711_1003012 Ga0228711_10030127 391
321 3300022740 Ga0228710_1003154 Ga0228710_10031547 391
322 3300025245 Ga0207425_1000034 Ga0207425_1000034211 391
323 3300025253 Ga0209677_100297 Ga0209677_10029731 391
324 3300025258 Ga0209129_1000094 Ga0209129_1000094156 391
325 3300025258 Ga0209129_1000935 Ga0209129_100093510 391
326 3300025261 Ga0209233_1000440 Ga0209233_10004406 391
327 3300025273 Ga0209673_1000283 Ga0209673_10002838 391
328 3300025273 Ga0209673_1002912 Ga0209673_10029128 391
329 3300025273 Ga0209673_1007164 Ga0209673_10071641 391
330 3300025291 Ga0209675_1020321 Ga0209675_10203211 391
331 3300025294 Ga0209025_1000184 Ga0209025_100018414 391
332 3300025294 Ga0209025_1002498 Ga0209025_10024988 391
333 3300025294 Ga0209025_1016784 Ga0209025_10167846 391
334 3300025295 Ga0209564_1001187 Ga0209564_10011878 391
335 3300025295 Ga0209564_1002316 Ga0209564_10023169 391
336 3300025297 Ga0209758_1000159 Ga0209758_100015914 391
337 3300025297 Ga0209758_1004552 Ga0209758_10045528 391
338 3300025299 Ga0209256_1000132 Ga0209256_1000132125 391
339 3300025299 Ga0209256_1001025 Ga0209256_100102527 391
340 3300025299 Ga0209256_1003992 Ga0209256_10039922 391
341 3300025299 Ga0209256_1011165 Ga0209256_10111652 391
342 3300025302 Ga0207426_1000384 Ga0207426_10003848 391
343 3300025302 Ga0207426_1000884 Ga0207426_10008842 391
344 3300025303 Ga0209051_1003274 Ga0209051_10032747 391
345 3300025303 Ga0209051_1031008 Ga0209051_10310082 391
346 3300025913 Ga0207695_10000044 Ga0207695_1000004449 391
347 3300025914 Ga0207671_10000364 Ga0207671_1000036466 391
348 3300025961 Ga0207712_10056229 Ga0207712_100562292 391
349 3300027111 Ga0209281_1000596 Ga0209281_100059619 391
350 3300027666 Ga0209282_1000267 Ga0209282_100026717 391
351 3300028794 Ga0307515_10002407 Ga0307515_1000240713 391
352 3300031901 Ga0307406_10050205 Ga0307406_100502055 391
353 3300031967 Ga0315914_1000965 Ga0315914_100096518 391
354 3300033430 Ga0315913_1000276 Ga0315913_100027617 391
355 3300033464 Ga0315915_1000499 Ga0315915_100049917 391
356 3300046454 Ga0495592_0059538 Ga0495592_0059538_1490_2665 391
357 3300046459 Ga0495629_0016169 Ga0495629_0016169_3694_4869 391
358 3300046462 Ga0495651_0128394 Ga0495651_0128394_44_1219 391
359 3300046477 Ga0495664_0076456 Ga0495664_0076456_605_1780 391
360 3300046492 Ga0495585_0046271 Ga0495585_0046271_117_1292 391
361 3300046501 Ga0495607_0066808 Ga0495607_0066808_129_1304 391
362 3300046512 Ga0495610_0000915 Ga0495610_0000915_13029_14204 391
363 3300046515 Ga0495620_0011830 Ga0495620_0011830_2917_4092 391
364 3300046515 Ga0495620_0040507 Ga0495620_0040507_802_1977 391
365 3300046518 Ga0495631_0055904 Ga0495631_0055904_323_1498 391
366 3300046519 Ga0495632_0001194 Ga0495632_0001194_6702_7877 391
367 3300046519 Ga0495632_0036567 Ga0495632_0036567_1003_2178 391
368 3300046522 Ga0495643_0039337 Ga0495643_0039337_676_1851 391
369 3300046524 Ga0495648_0064663 Ga0495648_0064663_398_1573 391
370 3300046533 Ga0495640_0116216 Ga0495640_0116216_539_1714 391
371 3300046660 Ga0495625_0056919 Ga0495625_0056919_981_2156 391
372 3300046660 Ga0495625_0089337 Ga0495625_0089337_876_2051 391
373 3300046674 Ga0495588_0038401 Ga0495588_0038401_17_1192 391
374 3300046809 Ga0495600_0023661 Ga0495600_0023661_2603_3778 391
375 3300047317 Ga0495604_0030545 Ga0495604_0030545_2841_4016 391
376 3300047443 Ga0495687_023369 Ga0495687_023369_398_1573 391
377 3300047469 Ga0495673_0067124 Ga0495673_0067124_199_1374 391
378 3300047472 Ga0495686_0000922 Ga0495686_0000922_19624_20799 391
379 3300047472 Ga0495686_0071889 Ga0495686_0071889_662_1837 391
380 3300048905 Ga0496102_0136972 Ga0496102_0136972_581_1774 391
381 3300048909 Ga0496106_0001858 Ga0496106_0001858_740_1915 391
382 3300048919 Ga0496116_0004572 Ga0496116_0004572_144_1319 391
383 3300048919 Ga0496116_0036635 Ga0496116_0036635_66_1259 391
384 3300048919 Ga0496116_0078599 Ga0496116_0078599_840_2015 391
385 3300048919 Ga0496116_0135117 Ga0496116_0135117_182_1357 391
386 3300048920 Ga0496117_0001675 Ga0496117_0001675_2192_3385 391
387 3300048920 Ga0496117_0003875 Ga0496117_0003875_11942_13117 391
388 3300048920 Ga0496117_0006523 Ga0496117_0006523_9355_10548 391
389 3300048920 Ga0496117_0030887 Ga0496117_0030887_1083_2273 391
390 3300048920 Ga0496117_0108934 Ga0496117_0108934_474_1649 391
391 3300048921 Ga0496118_0002290 Ga0496118_0002290_3886_5079 391
392 3300048921 Ga0496118_0013532 Ga0496118_0013532_3062_4252 391
393 3300048921 Ga0496118_0044424 Ga0496118_0044424_1837_3012 391
394 3300048921 Ga0496118_0055208 Ga0496118_0055208_1665_2858 391
395 3300048922 Ga0496119_0021204 Ga0496119_0021204_2472_3665 391
396 3300048923 Ga0496120_0020634 Ga0496120_0020634_1966_3159 391
397 3300048924 Ga0496121_0041943 Ga0496121_0041943_1756_2949 391
398 3300048924 Ga0496121_0049082 Ga0496121_0049082_2171_3364 391
399 3300048924 Ga0496121_0122752 Ga0496121_0122752_564_1739 391
400 3300048925 Ga0496122_0003156 Ga0496122_0003156_18828_20021 391
401 3300048925 Ga0496122_0051268 Ga0496122_0051268_1949_3124 391
402 3300048925 Ga0496122_0090403 Ga0496122_0090403_849_2024 391
403 3300048926 Ga0496123_0034170 Ga0496123_0034170_220_1413 391
404 3300048926 Ga0496123_0064509 Ga0496123_0064509_939_2114 391
405 3300048927 Ga0496124_0001790 Ga0496124_0001790_16820_17995 391
406 3300048927 Ga0496124_0052615 Ga0496124_0052615_1365_2558 391
407 3300048927 Ga0496124_0093219 Ga0496124_0093219_241_1434 391
408 3300048928 Ga0496125_0006012 Ga0496125_0006012_575_1768 391
409 3300048929 Ga0496126_0132352 Ga0496126_0132352_560_1753 391
410 3300049571 Ga0501034_0321784 Ga0501034_0321784_155_1330 391
411 3300049574 Ga0501038_0056878 Ga0501038_0056878_642_1817 391
412 3300049589 Ga0501073_0071170 Ga0501073_0071170_345_1520 391
413 3300049742 Ga0501080_0188777 Ga0501080_0188777_55_1230 391
414 3300050492 nmdc:mga0yw44_18895_c1 nmdc:mga0yw44_18895_c1_626_1816 391
415 3300050495 nmdc:mga04h51_48142_c1 nmdc:mga04h51_48142_c1_41_1231 391
416 3300053125 Ga0500618_009573 Ga0500618_009573_1243_2418 391
417 3300053136 Ga0500559_0003811 Ga0500559_0003811_2681_3871 391
418 3300053139 Ga0500568_0000282 Ga0500568_0000282_730_1905 391
419 3300053140 Ga0500573_0027795 Ga0500573_0027795_281_1471 391
420 3300053148 Ga0500590_001068 Ga0500590_001068_2138_3313 391
421 3300053151 Ga0500604_0003896 Ga0500604_0003896_2236_3411 391
422 3300053160 Ga0500633_0000619 Ga0500633_0000619_576_1751 391
423 3300053140 Ga0500573_0000126 Ga0500573_0000126_13427_14605 392
424 3300053125 Ga0500618_000241 Ga0500618_000241_22769_23968 393
425 3300002739 JGI25158J39367_1001526 JGI25158J39367_10015261 395
426 3300002987 JGI25159J45721_1000050 JGI25159J45721_100005020 395
427 3300003187 JGI25151J46595_10000081 JGI25151J46595_1000008114 395
428 3300003215 JGI25153J46596_10000529 JGI25153J46596_100005293 395
429 3300003354 JGI25160J50197_1000097 JGI25160J50197_100009729 395
430 3300003771 Ga0055526_1000756 Ga0055526_100075620 395
431 3300003775 Ga0055524_1001434 Ga0055524_10014343 395
432 3300003775 Ga0055524_1029501 Ga0055524_10295011 395
433 3300004625 Ga0055543_1000610 Ga0055543_10006102 395
434 3300005262 Ga0065165_1000427 Ga0065165_100042729 395
435 3300013249 Ga0171463_1004 Ga0171463_100432 395
436 3300025284 Ga0209130_1000027 Ga0209130_100002729 395
437 3300025295 Ga0209564_1000111 Ga0209564_100011131 395
438 3300025299 Ga0209256_1001004 Ga0209256_10010042 395
439 3300025302 Ga0207426_1000072 Ga0207426_1000072286 395
440 3300025304 Ga0209257_1011560 Ga0209257_10115606 395
441 3300048925 Ga0496122_0138071 Ga0496122_0138071_241_1512 395
442 3300048927 Ga0496124_0010851 Ga0496124_0010851_1491_2762 395
443 iso_pu_bacteria 2599185352 2600193543 395
444 iso_pu_bacteria 2643221723 2644677261 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08436

DXP_redisom_C

1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain

203

286

0.99

PF02670

DXP_reductoisom

1-deoxy-D-xylulose 5-phosphate reductoisomerase

62

189

0.97

PF13288

DXPR_C

DXP reductoisomerase C-terminal domain

318

436

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7s04-assembly1.cif.gz_A-2 1-deoxy-d-xylulose 5-phosphate reductoisomerase (ispc) from acinetobacter baumannii in complex with fr900098, nadph, and a magnesium ion 0.9635 12 393
1r0k-assembly2.cif.gz_D crystal structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis 0.9568 13 393
1r0k-assembly2.cif.gz_C crystal structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis 0.9548 11 393
4oof-assembly1.cif.gz_B m. tuberculosis 1-deoxy-d-xylulose-5-phosphate reductoisomerase w203f mutant bound to fosmidomycin and nadph 0.9536 11 393
1r0k-assembly1.cif.gz_B crystal structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis 0.9514 11 393
ID Description Score Start End Superfamily
4zn6B03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9886 312 393 1.10.1740.10
1r0lC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9826 12 160 3.40.50.720
5dulC03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9767 312 393 1.10.1740.10
1r0kC03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9764 312 393 1.10.1740.10
1t1rA03 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.976 312 393 1.10.1740.10
ID Description Score Start End GO Terms
AF-J0VTA9-F1-model_v4 deleted 0.9939 7 393
AF-A0A506UC75-F1-model_v4 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) 0.9932 11 393 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-A0A4S3ZW77-F1-model_v4 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) 0.9911 5 393 GO:0016853
GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-Q1MB26-F1-model_v4 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) 0.9906 5 393 GO:0030145
GO:0030604
GO:0051484
GO:0070402
AF-F0L3D1-F1-model_v4 deleted 0.9906 2 393

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Predicted Structure (AlphaFold2)

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