F443315

General Info

Members Datasets Scaffolds Average Seq Length
435 215 374 382

Family's Representative Sequence

Representative Sequence 3300009101|Ga0105247_10011320|Ga0105247_100113204
Length 449
Sequence MSIIIISSFDVKLGYGSSPPPAILRGRVHRLQPALVSGHGMAAIIASRCCEAFDNNFPAACRRSVMLPGLDIKQYSTLLDKLYEGPFEEVPFLAFLDELRALLELNFATLILRQPNSHDPGMQFMSGLNRPPTSIHSGAPNASSYYALDPLHELPENQVIALDELIPRQKLEQTEFYKQYLQNDDLYHVIGIDLCDSQGRRFALRLCRPQSGHSFSHEERELIATLASHVCRAVANGIKSIQLDSERQFYARATFARTIGSITLDEHGYIVQCNDAAERFLGEKDGVARLHNQIHLKNTELNETLRQQIQIALKNQRSEIAPPLAIQAMSVPRPSGKPDYELVVKPLPVDRYIAPSHTPHLIVFISSPAEKIAISTKTLMTLYHLTHTEATLTILLAEGKTLDEVTQELNIARNTARAHLRAIFSKTGVTQQSMLVSLVLKSLASIAPQ

Samples

Sample ID Description Type Environment
1 2511231010 Pseudomonas sp. GM25 Isolate Nodule
2 2511231012 Pseudomonas sp. GM33 Isolate Nodule
3 2511231014 Pseudomonas sp. GM48 Isolate Nodule
4 2511231015 Pseudomonas sp. GM49 Isolate Nodule
5 2511231020 Pseudomonas sp. GM74 Isolate Nodule
6 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
7 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
8 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
9 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
10 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
11 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
12 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
13 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
14 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
15 2643221589 Pseudomonas sp. Root68 Isolate Unclassified
16 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
17 2643221633 Pseudomonas sp. Root329 Isolate Unclassified
18 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
19 2738543015 Pseudomonas sp. GV041 Isolate Unclassified
20 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
21 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
22 2808606379 Pseudomonas sp. SJZ079 Isolate Rhizosphere
23 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
24 2818991452 Burkholderia cepacia 561 Isolate Unclassified
25 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
26 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
27 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
28 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
29 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
30 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
31 2904550169 Stutzerimonas stutzeri 1099 Isolate Rhizosphere
32 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
33 2928170801 Burkholderia sp. 572 Isolate Unclassified
34 2939636861 Pseudomonas sp. 2725 Isolate Rhizosphere
35 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
36 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
37 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
38 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
39 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
40 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
41 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
42 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
43 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
44 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
45 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
46 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
47 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
48 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
49 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
50 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
51 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
52 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
53 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
54 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
58 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
61 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
81 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
107 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
108 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
114 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
115 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
116 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
117 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
118 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
119 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
120 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
121 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
122 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
123 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
124 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
125 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
126 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
127 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
128 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
129 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
130 3300044650 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4E Metagenome Unclassified
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
139 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
140 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
141 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
142 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
143 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
144 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
145 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
146 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
147 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
148 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
149 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
150 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
151 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
152 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
155 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
156 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
157 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
158 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
159 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
160 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
161 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
162 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
163 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
164 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
165 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
166 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
167 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
168 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
169 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
170 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
171 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
172 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
173 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
174 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
175 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
176 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
177 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
178 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
179 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
180 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
181 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
182 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
183 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
184 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
185 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
186 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
187 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
188 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
189 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
190 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
191 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
192 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
193 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
194 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
195 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
196 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
197 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
198 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
199 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
200 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
201 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
206 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
207 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
208 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
209 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
210 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
211 8011350971 Pseudomonas sp. 30_B Isolate Rhizosphere
212 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
213 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
214 8056125926 Pseudomonas azerbaijanorientalis SWRI123 Isolate Rhizosphere
215 8056177738 Pseudomonas azerbaijanoccidentalis SWRI74 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.97
Metatranscriptomes 0
Isolates 11.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.05
Nodule 3.22
Rhizoplane 1.84
Rhizosphere 81.15
Stem 0
Stem Tuber 0
Unclassified 5.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10019161 3300003187 Bacteria 2915
2 Ga0055532_1000390 3300003758 Bacteria 22059
3 Ga0055532_1000402 3300003758 Bacteria 21368
4 Ga0055532_1000413 3300003758 Bacteria 20824
5 Ga0055527_1000075 3300003760 Bacteria 80582
6 Ga0055527_1000103 3300003760 Bacteria 62002
7 Ga0055535_1000127 3300003761 Bacteria 80582
8 Ga0055535_1000209 3300003761 Bacteria 62002
9 Ga0055542_1001334 3300003762 Bacteria 12897
10 Ga0055542_1003803 3300003762 Bacteria 3921
11 Ga0065714_10019151 3300005288 Bacteria 2283
12 Ga0070670_100000017 3300005331 Bacteria 224429
13 Ga0070670_100000018 3300005331 Bacteria 221691
14 Ga0070666_10002359 3300005335 Bacteria 11408
15 Ga0070666_10005400 3300005335 Bacteria 7835
16 Ga0070666_10018568 3300005335 Bacteria 4475
17 Ga0070660_100067653 3300005339 Bacteria 2783
18 Ga0070669_100002140 3300005353 Bacteria 14289
19 Ga0070669_100005601 3300005353 Bacteria 9077
20 Ga0070669_100008374 3300005353 Bacteria 7377
21 Ga0070671_100000084 3300005355 Bacteria 59737
22 Ga0070671_100000755 3300005355 Bacteria 23162
23 Ga0070671_100001975 3300005355 Bacteria 15739
24 Ga0070688_100003097 3300005365 Bacteria 8503
25 Ga0070688_100005053 3300005365 Bacteria 6912
26 Ga0070688_100072756 3300005365 Bacteria 2203
27 Ga0070667_100000002 3300005367 Bacteria 504831
28 Ga0070667_100002156 3300005367 Bacteria 17333
29 Ga0070685_10000003 3300005466 Bacteria 283138
30 Ga0070685_10000009 3300005466 Bacteria 166260
31 Ga0070685_10000016 3300005466 Bacteria 112355
32 Ga0070665_100001428 3300005548 Bacteria 28009
33 Ga0070665_100023808 3300005548 Bacteria 6169
34 Ga0070665_100252901 3300005548 Bacteria 1763
35 Ga0068855_100053739 3300005563 Bacteria 4737
36 Ga0068859_100011909 3300005617 Bacteria 8741
37 Ga0068859_100033473 3300005617 Bacteria 5160
38 Ga0068864_100000002 3300005618 Bacteria 658857
39 Ga0068864_100000029 3300005618 Bacteria 224429
40 Ga0068858_100075666 3300005842 Bacteria 3127
41 Ga0068858_100090964 3300005842 Bacteria 2840
42 Ga0068860_100000450 3300005843 Bacteria 52006
43 Ga0068860_100000499 3300005843 Bacteria 48692
44 Ga0068862_100001455 3300005844 Bacteria 21797
45 Ga0068862_100001709 3300005844 Bacteria 19896
46 Ga0068862_100006341 3300005844 Bacteria 9832
47 Ga0075432_10000043 3300006058 Bacteria 24120
48 Ga0075432_10002337 3300006058 Bacteria 6317
49 Ga0075432_10026801 3300006058 Bacteria 1981
50 Ga0075432_10044235 3300006058 Bacteria 1561
51 Ga0097620_100011909 3300006931 Bacteria 8741
52 Ga0097620_100033473 3300006931 Bacteria 5160
53 Ga0079104_1000097 3300006946 Bacteria 129435
54 Ga0105244_10001385 3300009036 Bacteria 19690
55 Ga0105244_10056404 3300009036 Bacteria 1989
56 Ga0105244_10092697 3300009036 Bacteria 1484
57 Ga0105240_10062052 3300009093 Bacteria 4655
58 Ga0105240_10085862 3300009093 Bacteria 3855
59 Ga0105240_10141806 3300009093 Bacteria 2872
60 Ga0105240_10149039 3300009093 Bacteria 2788
61 Ga0105240_10235218 3300009093 Bacteria 2127
62 Ga0105240_10326769 3300009093 Bacteria 1746
63 Ga0105247_10011320 3300009101 Bacteria 5381
64 Ga0105247_10011594 3300009101 Bacteria 5309
65 Ga0105247_10074984 3300009101 Bacteria 2123
66 Ga0105248_10068622 3300009177 Bacteria 3980
67 Ga0105248_10466998 3300009177 Bacteria 1422
68 Ga0105249_10012077 3300009553 Bacteria 7605
69 Ga0105249_10076714 3300009553 Bacteria 3098
70 Ga0105239_10043623 3300010375 Bacteria 4917
71 Ga0157371_10000300 3300013102 Bacteria 65433
72 Ga0157370_10000340 3300013104 Bacteria 58900
73 Ga0157378_10122816 3300013297 Bacteria 2396
74 Ga0163163_10000061 3300014325 Bacteria 119752
75 Ga0163163_10001034 3300014325 Bacteria 23573
76 Ga0182008_10019563 3300014497 Bacteria 3494
77 Ga0157379_10064972 3300014968 Bacteria 3261
78 Ga0163161_10055565 3300017792 Bacteria 2874
79 Ga0163161_10098807 3300017792 Bacteria 2170
80 Ga0209566_100168 3300025225 Bacteria 71340
81 Ga0209674_103384 3300025226 Bacteria 2955
82 Ga0209672_100062 3300025228 Bacteria 204912
83 Ga0209672_100101 3300025228 Bacteria 106567
84 Ga0209147_100034 3300025229 Bacteria 346646
85 Ga0209147_100078 3300025229 Bacteria 204912
86 Ga0209147_100144 3300025229 Bacteria 106567
87 Ga0209258_100108 3300025242 Bacteria 204912
88 Ga0209258_100227 3300025242 Bacteria 106567
89 Ga0209148_1000558 3300025254 Bacteria 35263
90 Ga0209148_1000610 3300025254 Bacteria 32026
91 Ga0209759_1007056 3300025256 Bacteria 3673
92 Ga0209455_1000222 3300025272 Bacteria 78507
93 Ga0209455_1000251 3300025272 Bacteria 63875
94 Ga0209676_1002046 3300025292 Bacteria 15772
95 Ga0209025_1000034 3300025294 Bacteria 413205
96 Ga0209050_1003037 3300025298 Bacteria 12948
97 Ga0209051_1003617 3300025303 Bacteria 10034
98 Ga0209051_1009206 3300025303 Bacteria 5114
99 Ga0209051_1019873 3300025303 Bacteria 2916
100 Ga0207655_1017355 3300025728 Bacteria 3887
101 Ga0207710_10008617 3300025900 Unclassified 4301
102 Ga0207695_10209495 3300025913 Bacteria 1860
103 Ga0207657_10083022 3300025919 Bacteria 2688
104 Ga0207681_10003997 3300025923 Bacteria 9152
105 Ga0207681_10008673 3300025923 Bacteria 6206
106 Ga0207694_10010938 3300025924 Bacteria 6855
107 Ga0207650_10000002 3300025925 Bacteria 1439222
108 Ga0207650_10000003 3300025925 Bacteria 1123235
109 Ga0207644_10000014 3300025931 Bacteria 181604
110 Ga0207644_10000406 3300025931 Bacteria 28096
111 Ga0207644_10000673 3300025931 Bacteria 21534
112 Ga0207711_10000765 3300025941 Bacteria 31593
113 Ga0207711_10001149 3300025941 Bacteria 25238
114 Ga0207711_10001343 3300025941 Bacteria 23216
115 Ga0207667_10024130 3300025949 Bacteria 6684
116 Ga0207712_10199712 3300025961 Bacteria 1585
117 Ga0207658_10000001 3300025986 Bacteria 1439333
118 Ga0207658_10000012 3300025986 Bacteria 224402
119 Ga0207703_10049847 3300026035 Bacteria 3386
120 Ga0207703_10147294 3300026035 Bacteria 2049
121 Ga0207641_10019517 3300026088 Bacteria 5564
122 Ga0207641_10029750 3300026088 Bacteria 4517
123 Ga0207641_10039803 3300026088 Bacteria 3932
124 Ga0207676_10000001 3300026095 Bacteria 1439222
125 Ga0207676_10000003 3300026095 Bacteria 1123235
126 Ga0209281_1000136 3300027111 Bacteria 182153
127 Ga0207428_10002473 3300027907 Bacteria 18462
128 Ga0207428_10059678 3300027907 Bacteria 3024
129 Ga0207428_10079227 3300027907 Bacteria 2569
130 Ga0268266_10000945 3300028379 Bacteria 36992
131 Ga0268266_10001511 3300028379 Bacteria 27338
132 Ga0268266_10001561 3300028379 Bacteria 26786
133 Ga0268266_10023782 3300028379 Bacteria 5214
134 Ga0268266_10257775 3300028379 Bacteria 1615
135 Ga0268265_10000455 3300028380 Bacteria 43315
136 Ga0268265_10000553 3300028380 Bacteria 38115
137 Ga0268265_10006634 3300028380 Bacteria 7831
138 Ga0268264_10000004 3300028381 Bacteria 1116842
139 Ga0268264_10000009 3300028381 Bacteria 724972
140 Ga0265334_10000175 3300028573 Bacteria 37808
141 Ga0265331_10006478 3300031250 Bacteria 6916
142 Ga0265327_10000229 3300031251 Bacteria 113907
143 Ga0265327_10000623 3300031251 Bacteria 58280
144 Ga0307408_100000866 3300031548 Bacteria 23732
145 Ga0307408_100009073 3300031548 Bacteria 6565
146 Ga0395900_0031733 3300037418 Bacteria 5430
147 Ga0395905_0036797 3300037471 Bacteria 4597
148 Ga0395901_0080573 3300038443 Bacteria 3400
149 Ga0436361_0652538 3300039447 Bacteria 6196
150 Ga0439436_0000088 3300041404 Bacteria 21953
151 Ga0439438_001544 3300041405 Bacteria 10147
152 Ga0439438_024745 3300041405 Bacteria 1641
153 Ga0439447_002898 3300041407 Bacteria 6142
154 Ga0439447_008828 3300041407 Bacteria 3096
155 Ga0439466_0000164 3300041411 Bacteria 26501
156 Ga0439466_0000925 3300041411 Bacteria 11223
157 Ga0439466_0004463 3300041411 Bacteria 5385
158 Ga0439432_002634 3300042006 Bacteria 6726
159 Ga0439432_010895 3300042006 Bacteria 3138
160 Ga0439432_012970 3300042006 Bacteria 2839
161 Ga0439451_000131 3300042009 Bacteria 13712
162 Ga0439451_000519 3300042009 Bacteria 7370
163 Ga0439451_003640 3300042009 Bacteria 3120
164 Ga0439452_001387 3300042010 Bacteria 9971
165 Ga0439452_001437 3300042010 Bacteria 9737
166 Ga0439452_001667 3300042010 Bacteria 8757
167 Ga0439456_000091 3300042013 Bacteria 31484
168 Ga0450911_002511 3300042115 Bacteria 3568
169 Ga0450920_000227 3300042122 Bacteria 8489
170 Ga0450922_000142 3300042124 Bacteria 7467
171 Ga0450923_003870 3300042125 Bacteria 2304
172 Ga0450902_007691 3300042137 Bacteria 1671
173 Ga0439434_0003451 3300042435 Bacteria 4620
174 Ga0439460_0003176 3300042461 Bacteria 3968
175 Ga0450918_013518 3300042531 Bacteria 1420
176 Ga0466986_0060449 3300044650 Bacteria 2622
177 Ga0466966_0048280 3300044684 Bacteria 2711
178 Ga0466966_0148019 3300044684 Bacteria 1433
179 Ga0466961_0003622 3300044693 Bacteria 9622
180 Ga0466961_0040818 3300044693 Bacteria 2974
181 Ga0466963_0016231 3300044694 Bacteria 4629
182 Ga0466963_0082682 3300044694 Bacteria 2177
183 Ga0466957_0024564 3300044842 Bacteria 3566
184 Ga0466957_0055907 3300044842 Unclassified 2412
185 Ga0466957_0131081 3300044842 Bacteria 1606
186 Ga0466959_0214215 3300045049 Bacteria 1337
187 Ga0466958_0011244 3300045836 Bacteria 5039
188 Ga0466967_0036813 3300045976 Bacteria 4181
189 Ga0466967_0109307 3300045976 Bacteria 2538
190 Ga0495617_000722 3300046452 Bacteria 16360
191 Ga0495617_073480 3300046452 Bacteria 1123
192 Ga0495603_0001528 3300046455 Bacteria 13519
193 Ga0495603_0133386 3300046455 Bacteria 1446
194 Ga0495590_0000145 3300046457 Bacteria 42509
195 Ga0495590_0000154 3300046457 Bacteria 41280
196 Ga0495590_0002921 3300046457 Bacteria 7035
197 Ga0495591_002759 3300046458 Bacteria 9483
198 Ga0495591_033280 3300046458 Bacteria 1526
199 Ga0495638_0004894 3300046460 Bacteria 10068
200 Ga0495638_0007604 3300046460 Bacteria 7750
201 Ga0495638_0008694 3300046460 Bacteria 7180
202 Ga0495605_0000112 3300046474 Bacteria 104223
203 Ga0495605_0000177 3300046474 Bacteria 80399
204 Ga0495605_0000275 3300046474 Bacteria 58450
205 Ga0495605_0000410 3300046474 Bacteria 39150
206 Ga0495605_0000427 3300046474 Bacteria 38193
207 Ga0495605_0002182 3300046474 Bacteria 12232
208 Ga0495584_0000123 3300046491 Bacteria 53094
209 Ga0495584_0001431 3300046491 Bacteria 14367
210 Ga0495584_0001868 3300046491 Bacteria 12188
211 Ga0495584_0001876 3300046491 Bacteria 12147
212 Ga0495584_0007370 3300046491 Bacteria 5738
213 Ga0495584_0011674 3300046491 Bacteria 4496
214 Ga0495584_0061977 3300046491 Bacteria 1880
215 Ga0495584_0065453 3300046491 Bacteria 1828
216 Ga0495585_0000729 3300046492 Bacteria 29353
217 Ga0495594_0004750 3300046499 Bacteria 7001
218 Ga0495607_0000339 3300046501 Bacteria 48346
219 Ga0495607_0000683 3300046501 Bacteria 32807
220 Ga0495607_0001100 3300046501 Bacteria 24605
221 Ga0495607_0001401 3300046501 Bacteria 21447
222 Ga0495607_0005125 3300046501 Bacteria 9472
223 Ga0495607_0013417 3300046501 Bacteria 5371
224 Ga0495607_0015131 3300046501 Bacteria 5009
225 Ga0495607_0062442 3300046501 Bacteria 2111
226 Ga0495607_0110933 3300046501 Bacteria 1454
227 Ga0495583_0000008 3300046506 Bacteria 411092
228 Ga0495583_0000026 3300046506 Bacteria 256777
229 Ga0495583_0000629 3300046506 Bacteria 47039
230 Ga0495606_0000456 3300046507 Bacteria 67056
231 Ga0495610_0000344 3300046512 Bacteria 49031
232 Ga0495610_0006523 3300046512 Bacteria 8003
233 Ga0495610_0009149 3300046512 Bacteria 6299
234 Ga0495616_0000055 3300046513 Bacteria 104118
235 Ga0495616_0000632 3300046513 Bacteria 26334
236 Ga0495616_0156130 3300046513 Bacteria 1029
237 Ga0495620_0000552 3300046515 Bacteria 23656
238 Ga0495630_0072025 3300046517 Bacteria 2602
239 Ga0495631_0010307 3300046518 Bacteria 4627
240 Ga0495632_0031102 3300046519 Bacteria 2764
241 Ga0495637_0002859 3300046520 Bacteria 9359
242 Ga0495637_0008461 3300046520 Bacteria 5051
243 Ga0495637_0016772 3300046520 Bacteria 3421
244 Ga0495643_0000395 3300046522 Bacteria 57382
245 Ga0495643_0002024 3300046522 Bacteria 16897
246 Ga0495643_0026823 3300046522 Bacteria 3245
247 Ga0495643_0034768 3300046522 Bacteria 2778
248 Ga0495643_0063261 3300046522 Bacteria 1957
249 Ga0495644_0006409 3300046523 Bacteria 4561
250 Ga0495648_0004909 3300046524 Bacteria 11246
251 Ga0495648_0006391 3300046524 Bacteria 9630
252 Ga0495648_0036304 3300046524 Bacteria 3182
253 Ga0495648_0040567 3300046524 Bacteria 2950
254 Ga0495666_0000043 3300046526 Bacteria 46931
255 Ga0495642_0000207 3300046528 Bacteria 34488
256 Ga0495642_0000427 3300046528 Bacteria 22293
257 Ga0495654_0000805 3300046530 Bacteria 24067
258 Ga0495654_0001486 3300046530 Bacteria 16040
259 Ga0495654_0003399 3300046530 Bacteria 9782
260 Ga0495654_0005589 3300046530 Bacteria 7276
261 Ga0495654_0039179 3300046530 Bacteria 2366
262 Ga0495609_0000092 3300046538 Bacteria 106345
263 Ga0495609_0000676 3300046538 Bacteria 26334
264 Ga0495622_0002436 3300046557 Bacteria 9033
265 Ga0495622_0046975 3300046557 Bacteria 2006
266 Ga0495633_0048237 3300046558 Bacteria 2011
267 Ga0495656_0008299 3300046615 Bacteria 3703
268 Ga0495668_0001883 3300046616 Bacteria 18804
269 Ga0495625_0001734 3300046660 Bacteria 25215
270 Ga0495661_0000181 3300046665 Bacteria 72564
271 Ga0495661_0000227 3300046665 Bacteria 64771
272 Ga0495661_0000428 3300046665 Bacteria 44514
273 Ga0495661_0000938 3300046665 Bacteria 26522
274 Ga0495661_0004478 3300046665 Bacteria 10079
275 Ga0495661_0004947 3300046665 Bacteria 9531
276 Ga0495588_0000737 3300046674 Bacteria 14937
277 Ga0495588_0028584 3300046674 Bacteria 2791
278 Ga0495588_0129811 3300046674 Bacteria 1329
279 Ga0495623_0016081 3300046679 Bacteria 4834
280 Ga0495669_0005141 3300046684 Bacteria 5442
281 Ga0495669_0015706 3300046684 Bacteria 3242
282 Ga0495670_0037359 3300046691 Bacteria 2420
283 Ga0495671_0000351 3300046692 Bacteria 38354
284 Ga0495671_0003484 3300046692 Bacteria 9652
285 Ga0495671_0006932 3300046692 Bacteria 6501
286 Ga0495671_0017259 3300046692 Bacteria 3843
287 Ga0495671_0022413 3300046692 Bacteria 3311
288 Ga0495671_0099424 3300046692 Bacteria 1422
289 Ga0495649_0000997 3300046694 Bacteria 22308
290 Ga0495649_0009045 3300046694 Bacteria 5947
291 Ga0495649_0010205 3300046694 Bacteria 5548
292 Ga0495649_0031657 3300046694 Bacteria 2915
293 Ga0495649_0038020 3300046694 Bacteria 2641
294 Ga0495649_0038956 3300046694 Bacteria 2606
295 Ga0495649_0079931 3300046694 Bacteria 1748
296 Ga0495589_0000060 3300046794 Bacteria 105304
297 Ga0495589_0000072 3300046794 Bacteria 95649
298 Ga0495589_0000532 3300046794 Bacteria 26669
299 Ga0495589_0000870 3300046794 Bacteria 18790
300 Ga0495589_0029888 3300046794 Bacteria 2746
301 Ga0495589_0030622 3300046794 Bacteria 2709
302 Ga0495589_0041526 3300046794 Bacteria 2295
303 Ga0495589_0059288 3300046794 Bacteria 1881
304 Ga0495600_0013830 3300046809 Bacteria 5082
305 Ga0495660_0000083 3300046810 Bacteria 100535
306 Ga0495660_0000104 3300046810 Bacteria 90778
307 Ga0495660_0016591 3300046810 Bacteria 4246
308 Ga0495660_0052900 3300046810 Bacteria 2205
309 Ga0495604_0002127 3300047317 Bacteria 15937
310 Ga0495604_0067278 3300047317 Bacteria 2723
311 Ga0495674_0117295 3300047319 Bacteria 2251
312 Ga0495672_0000315 3300047320 Bacteria 64344
313 Ga0495672_0000577 3300047320 Bacteria 41479
314 Ga0495672_0000738 3300047320 Bacteria 35882
315 Ga0495672_0000989 3300047320 Bacteria 29342
316 Ga0495672_0001254 3300047320 Bacteria 25467
317 Ga0495672_0003420 3300047320 Bacteria 13607
318 Ga0495672_0019916 3300047320 Bacteria 4411
319 Ga0495672_0048049 3300047320 Bacteria 2533
320 Ga0495672_0052735 3300047320 Bacteria 2387
321 Ga0495680_0053805 3300047322 Bacteria 3129
322 Ga0495683_0000077 3300047323 Bacteria 97445
323 Ga0495687_000132 3300047443 Bacteria 114685
324 Ga0495687_000157 3300047443 Bacteria 103434
325 Ga0495687_000231 3300047443 Bacteria 78068
326 Ga0495687_000329 3300047443 Bacteria 60962
327 Ga0495687_000610 3300047443 Bacteria 41757
328 Ga0495687_000612 3300047443 Bacteria 41488
329 Ga0495675_0061184 3300047444 Bacteria 2385
330 Ga0495677_0000022 3300047445 Bacteria 103434
331 Ga0495677_0000081 3300047445 Bacteria 48700
332 Ga0495677_0000191 3300047445 Bacteria 28406
333 Ga0495673_0000900 3300047469 Bacteria 27305
334 Ga0495673_0000929 3300047469 Bacteria 26570
335 Ga0495673_0003040 3300047469 Bacteria 11290
336 Ga0495673_0008024 3300047469 Bacteria 5983
337 Ga0495673_0011358 3300047469 Bacteria 4792
338 Ga0495673_0019012 3300047469 Bacteria 3449
339 Ga0495681_0000395 3300047470 Bacteria 33862
340 Ga0495681_0000679 3300047470 Bacteria 25858
341 Ga0495681_0004704 3300047470 Bacteria 9258
342 Ga0495684_0015080 3300047471 Bacteria 5951
343 Ga0495686_0001587 3300047472 Bacteria 24011
344 Ga0495593_0000080 3300047673 Bacteria 41394
345 Ga0495626_0000055 3300048091 Bacteria 154219
346 Ga0495626_0000101 3300048091 Bacteria 110322
347 Ga0495626_0000221 3300048091 Bacteria 67305
348 Ga0495626_0000948 3300048091 Bacteria 25206
349 Ga0495626_0001104 3300048091 Bacteria 22816
350 Ga0495626_0009151 3300048091 Bacteria 5366
351 Ga0495626_0015232 3300048091 Bacteria 3940
352 Ga0496102_0346131 3300048905 Bacteria 1399
353 Ga0496110_0000097 3300048913 Bacteria 46871
354 Ga0496116_0002356 3300048919 Bacteria 19974
355 Ga0496116_0011536 3300048919 Bacteria 7303
356 Ga0496118_0030873 3300048921 Bacteria 4459
357 Ga0496124_0000723 3300048927 Bacteria 54106
358 Ga0496124_0015711 3300048927 Bacteria 7238
359 Ga0496125_0091627 3300048928 Bacteria 2276
360 Ga0495678_013962 3300049459 Bacteria 3750
361 Ga0495682_0001055 3300049460 Bacteria 16258
362 Ga0495682_0010197 3300049460 Bacteria 3650
363 Ga0501032_0009166 3300049569 Bacteria 7178
364 Ga0501034_0000384 3300049571 Bacteria 75553
365 Ga0501047_0001004 3300049581 Bacteria 28467
366 Ga0501047_0125006 3300049581 Bacteria 2453
367 Ga0501035_0013769 3300049822 Bacteria 7466
368 Ga0501044_0063948 3300049823 Bacteria 3757
369 Ga0501044_0312982 3300049823 Unclassified 1496
370 nmdc:mga0sz30_6809_c2 3300050516 Bacteria 2431
371 Ga0500595_007837 3300053119 Bacteria 4399
372 Ga0500595_013658 3300053119 Bacteria 3106
373 Ga0500564_002293 3300053138 Bacteria 7022
374 Ga0500564_007177 3300053138 Bacteria 4708

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042531 Ga0450918_013518 Ga0450918_013518_432_1391 319
2 3300046674 Ga0495588_0129811 Ga0495588_0129811_330_1289 319
3 3300046513 Ga0495616_0156130 Ga0495616_0156130_37_1008 323
4 3300046501 Ga0495607_0062442 Ga0495607_0062442_1052_2068 337
5 iso_pu_bacteria 2858688981 2858690145 354
6 3300042013 Ga0439456_000091 Ga0439456_000091_784_1851 355
7 3300031251 Ga0265327_10000623 Ga0265327_1000062340 356
8 3300039447 Ga0436361_0652538 Ga0436361_0652538_4289_5506 364
9 3300042009 Ga0439451_000519 Ga0439451_000519_862_1956 364
10 3300046452 Ga0495617_073480 Ga0495617_073480_15_1109 364
11 3300005331 Ga0070670_100000017 Ga0070670_10000001715 365
12 3300005335 Ga0070666_10005400 Ga0070666_100054008 365
13 3300005353 Ga0070669_100002140 Ga0070669_1000021403 365
14 3300005355 Ga0070671_100001975 Ga0070671_10000197514 365
15 3300005365 Ga0070688_100005053 Ga0070688_1000050534 365
16 3300005367 Ga0070667_100002156 Ga0070667_1000021565 365
17 3300005466 Ga0070685_10000016 Ga0070685_1000001651 365
18 3300005617 Ga0068859_100011909 Ga0068859_1000119095 365
19 3300005618 Ga0068864_100000029 Ga0068864_100000029198 365
20 3300005842 Ga0068858_100075666 Ga0068858_1000756661 365
21 3300005844 Ga0068862_100006341 Ga0068862_1000063415 365
22 3300006931 Ga0097620_100011909 Ga0097620_1000119095 365
23 3300009101 Ga0105247_10074984 Ga0105247_100749841 365
24 3300009177 Ga0105248_10068622 Ga0105248_100686222 365
25 3300014325 Ga0163163_10000061 Ga0163163_10000061107 365
26 3300025925 Ga0207650_10000003 Ga0207650_10000003198 365
27 3300025931 Ga0207644_10000014 Ga0207644_1000001475 365
28 3300025941 Ga0207711_10001149 Ga0207711_1000114920 365
29 3300025986 Ga0207658_10000012 Ga0207658_10000012198 365
30 3300026035 Ga0207703_10049847 Ga0207703_100498472 365
31 3300026088 Ga0207641_10029750 Ga0207641_100297505 365
32 3300026095 Ga0207676_10000003 Ga0207676_10000003897 365
33 3300028379 Ga0268266_10001561 Ga0268266_100015615 365
34 3300028380 Ga0268265_10000553 Ga0268265_1000055328 365
35 3300028381 Ga0268264_10000009 Ga0268264_10000009441 365
36 3300048928 Ga0496125_0091627 Ga0496125_0091627_402_1514 365
37 3300005548 Ga0070665_100001428 Ga0070665_1000014282 367
38 3300028379 Ga0268266_10000945 Ga0268266_1000094528 367
39 3300053119 Ga0500595_007837 Ga0500595_007837_194_1333 367
40 iso_pu_bacteria 2728369097 2729147336 367
41 3300005563 Ga0068855_100053739 Ga0068855_1000537393 369
42 3300009093 Ga0105240_10085862 Ga0105240_100858621 369
43 3300009093 Ga0105240_10141806 Ga0105240_101418062 369
44 3300010375 Ga0105239_10043623 Ga0105239_100436233 369
45 3300025913 Ga0207695_10209495 Ga0207695_102094952 369
46 3300025924 Ga0207694_10010938 Ga0207694_100109382 369
47 3300028379 Ga0268266_10257775 Ga0268266_102577752 369
48 3300045976 Ga0466967_0036813 Ga0466967_0036813_1633_2772 369
49 3300046523 Ga0495644_0006409 Ga0495644_0006409_2366_3475 369
50 3300009093 Ga0105240_10062052 Ga0105240_100620523 370
51 3300009093 Ga0105240_10149039 Ga0105240_101490392 370
52 3300009093 Ga0105240_10235218 Ga0105240_102352182 370
53 3300046506 Ga0495583_0000008 Ga0495583_0000008_118548_119684 371
54 iso_pu_bacteria 2554235231 2555249420 371
55 iso_pu_bacteria 2643221589 2643957205 371
56 iso_pu_bacteria 2643221602 2644020798 371
57 3300025919 Ga0207657_10083022 Ga0207657_100830222 372
58 3300038443 Ga0395901_0080573 Ga0395901_0080573_16_1137 372
59 3300042009 Ga0439451_000131 Ga0439451_000131_5997_7145 372
60 3300046474 Ga0495605_0000112 Ga0495605_0000112_15052_16173 372
61 3300046501 Ga0495607_0005125 Ga0495607_0005125_1052_2173 372
62 3300046501 Ga0495607_0013417 Ga0495607_0013417_3558_4712 372
63 3300046522 Ga0495643_0002024 Ga0495643_0002024_8477_9598 372
64 3300046665 Ga0495661_0000181 Ga0495661_0000181_65186_66307 372
65 3300046692 Ga0495671_0099424 Ga0495671_0099424_83_1237 372
66 3300046794 Ga0495589_0000870 Ga0495589_0000870_8477_9598 372
67 3300046810 Ga0495660_0000104 Ga0495660_0000104_81181_82302 372
68 3300047443 Ga0495687_000329 Ga0495687_000329_45754_46875 372
69 3300047445 Ga0495677_0000081 Ga0495677_0000081_9894_11015 372
70 3300047470 Ga0495681_0000679 Ga0495681_0000679_1785_2933 372
71 3300048091 Ga0495626_0000101 Ga0495626_0000101_21151_22272 372
72 iso_pu_bacteria 2511231010 2511288105 372
73 iso_pu_bacteria 2511231012 2511303067 372
74 iso_pu_bacteria 2511231014 2511313707 372
75 iso_pu_bacteria 2511231015 2511319781 372
76 iso_pu_bacteria 2511231020 2511349595 372
77 iso_pu_bacteria 2599185161 2599364125 372
78 iso_pu_bacteria 2599185162 2599370445 372
79 iso_pu_bacteria 2599185163 2599377364 372
80 iso_pu_bacteria 2599185166 2599395670 372
81 iso_pu_bacteria 2599185168 2599408407 372
82 iso_pu_bacteria 2643221589 2643953081 372
83 iso_pu_bacteria 2643221602 2644025079 372
84 iso_pu_bacteria 2643221633 2644189104 372
85 iso_pu_bacteria 2738543015 2739259723 372
86 iso_pu_bacteria 2808606379 2808940702 372
87 iso_pu_bacteria 2811994881 2812368421 372
88 iso_pu_bacteria 2904550169 2904555399 372
89 iso_pu_bacteria 2923519811 2923522477 372
90 iso_pu_bacteria 2939636861 2939640438 372
91 iso_pu_bacteria 2939651529 2939653753 372
92 iso_pu_bacteria 8011350971 8011353290 372
93 iso_pu_bacteria 8011350971 8011354187 372
94 iso_pu_bacteria 8056125926 8056129886 372
95 iso_pu_bacteria 8056177738 8056181513 372
96 3300037418 Ga0395900_0031733 Ga0395900_0031733_1306_2436 373
97 3300044693 Ga0466961_0003622 Ga0466961_0003622_5890_7035 373
98 3300045049 Ga0466959_0214215 Ga0466959_0214215_138_1283 373
99 3300046665 Ga0495661_0000428 Ga0495661_0000428_12847_13977 373
100 3300049823 Ga0501044_0312982 Ga0501044_0312982_289_1428 373
101 3300005339 Ga0070660_100067653 Ga0070660_1000676532 374
102 3300013297 Ga0157378_10122816 Ga0157378_101228162 374
103 3300044842 Ga0466957_0055907 Ga0466957_0055907_763_1902 374
104 3300045836 Ga0466958_0011244 Ga0466958_0011244_513_1652 374
105 3300046491 Ga0495584_0001868 Ga0495584_0001868_1733_2872 374
106 3300046491 Ga0495584_0011674 Ga0495584_0011674_1143_2282 374
107 3300046501 Ga0495607_0001401 Ga0495607_0001401_19600_20739 374
108 3300046513 Ga0495616_0000632 Ga0495616_0000632_24487_25626 374
109 3300046522 Ga0495643_0063261 Ga0495643_0063261_160_1299 374
110 3300046538 Ga0495609_0000676 Ga0495609_0000676_709_1848 374
111 3300046615 Ga0495656_0008299 Ga0495656_0008299_1900_3039 374
112 3300046665 Ga0495661_0000938 Ga0495661_0000938_24675_25814 374
113 3300046794 Ga0495589_0000532 Ga0495589_0000532_709_1848 374
114 3300047320 Ga0495672_0000989 Ga0495672_0000989_27296_28435 374
115 3300047443 Ga0495687_000132 Ga0495687_000132_26279_27418 374
116 3300047445 Ga0495677_0000191 Ga0495677_0000191_709_1848 374
117 3300048091 Ga0495626_0015232 Ga0495626_0015232_2093_3232 374
118 3300031548 Ga0307408_100000866 Ga0307408_10000086612 375
119 3300046457 Ga0495590_0000154 Ga0495590_0000154_20786_21913 375
120 3300046512 Ga0495610_0006523 Ga0495610_0006523_3853_4980 375
121 3300046524 Ga0495648_0006391 Ga0495648_0006391_8337_9464 375
122 3300046528 Ga0495642_0000207 Ga0495642_0000207_19647_20774 375
123 3300046530 Ga0495654_0005589 Ga0495654_0005589_3545_4681 375
124 3300046616 Ga0495668_0001883 Ga0495668_0001883_9963_11090 375
125 3300046684 Ga0495669_0005141 Ga0495669_0005141_4149_5276 375
126 3300046694 Ga0495649_0079931 Ga0495649_0079931_517_1644 375
127 3300046794 Ga0495589_0029888 Ga0495589_0029888_269_1396 375
128 3300047320 Ga0495672_0000315 Ga0495672_0000315_43906_45033 375
129 3300047469 Ga0495673_0008024 Ga0495673_0008024_4786_5913 375
130 iso_pu_bacteria 2858688981 2858690165 375
131 3300005288 Ga0065714_10019151 Ga0065714_100191513 376
132 3300006058 Ga0075432_10026801 Ga0075432_100268012 376
133 3300006058 Ga0075432_10044235 Ga0075432_100442352 376
134 3300006946 Ga0079104_1000097 Ga0079104_100009717 376
135 3300009036 Ga0105244_10001385 Ga0105244_1000138513 376
136 3300009036 Ga0105244_10056404 Ga0105244_100564042 376
137 3300009036 Ga0105244_10092697 Ga0105244_100926971 376
138 3300014497 Ga0182008_10019563 Ga0182008_100195633 376
139 3300017792 Ga0163161_10055565 Ga0163161_100555653 376
140 3300017792 Ga0163161_10098807 Ga0163161_100988072 376
141 3300025292 Ga0209676_1002046 Ga0209676_100204612 376
142 3300025298 Ga0209050_1003037 Ga0209050_10030372 376
143 3300025303 Ga0209051_1003617 Ga0209051_10036179 376
144 3300025728 Ga0207655_1017355 Ga0207655_10173554 376
145 3300027111 Ga0209281_1000136 Ga0209281_100013661 376
146 3300027907 Ga0207428_10059678 Ga0207428_100596781 376
147 3300027907 Ga0207428_10079227 Ga0207428_100792272 376
148 3300041404 Ga0439436_0000088 Ga0439436_0000088_8017_9147 376
149 3300041405 Ga0439438_001544 Ga0439438_001544_7642_8772 376
150 3300041405 Ga0439438_024745 Ga0439438_024745_420_1550 376
151 3300041407 Ga0439447_002898 Ga0439447_002898_3449_4579 376
152 3300041407 Ga0439447_008828 Ga0439447_008828_1728_2858 376
153 3300041411 Ga0439466_0000164 Ga0439466_0000164_24471_25601 376
154 3300041411 Ga0439466_0000925 Ga0439466_0000925_4412_5542 376
155 3300041411 Ga0439466_0004463 Ga0439466_0004463_3006_4136 376
156 3300042006 Ga0439432_002634 Ga0439432_002634_239_1369 376
157 3300042006 Ga0439432_010895 Ga0439432_010895_909_2039 376
158 3300042006 Ga0439432_012970 Ga0439432_012970_410_1540 376
159 3300042009 Ga0439451_000131 Ga0439451_000131_4724_5872 376
160 3300042009 Ga0439451_003640 Ga0439451_003640_1847_2977 376
161 3300042010 Ga0439452_001387 Ga0439452_001387_7722_8852 376
162 3300042010 Ga0439452_001437 Ga0439452_001437_3383_4513 376
163 3300042010 Ga0439452_001667 Ga0439452_001667_5216_6346 376
164 3300042115 Ga0450911_002511 Ga0450911_002511_1425_2555 376
165 3300042122 Ga0450920_000227 Ga0450920_000227_6772_7902 376
166 3300042124 Ga0450922_000142 Ga0450922_000142_1829_2959 376
167 3300042125 Ga0450923_003870 Ga0450923_003870_707_1837 376
168 3300042435 Ga0439434_0003451 Ga0439434_0003451_2494_3624 376
169 3300042461 Ga0439460_0003176 Ga0439460_0003176_1832_2962 376
170 3300046452 Ga0495617_000722 Ga0495617_000722_14205_15335 376
171 3300046455 Ga0495603_0001528 Ga0495603_0001528_215_1345 376
172 3300046455 Ga0495603_0133386 Ga0495603_0133386_139_1269 376
173 3300046457 Ga0495590_0000145 Ga0495590_0000145_22995_24125 376
174 3300046458 Ga0495591_002759 Ga0495591_002759_211_1341 376
175 3300046458 Ga0495591_033280 Ga0495591_033280_186_1316 376
176 3300046460 Ga0495638_0004894 Ga0495638_0004894_4304_5434 376
177 3300046460 Ga0495638_0007604 Ga0495638_0007604_683_1813 376
178 3300046460 Ga0495638_0008694 Ga0495638_0008694_1499_2629 376
179 3300046474 Ga0495605_0000275 Ga0495605_0000275_22561_23691 376
180 3300046491 Ga0495584_0001431 Ga0495584_0001431_3637_4767 376
181 3300046491 Ga0495584_0001876 Ga0495584_0001876_8621_9751 376
182 3300046491 Ga0495584_0061977 Ga0495584_0061977_503_1633 376
183 3300046491 Ga0495584_0065453 Ga0495584_0065453_658_1788 376
184 3300046492 Ga0495585_0000729 Ga0495585_0000729_14009_15139 376
185 3300046499 Ga0495594_0004750 Ga0495594_0004750_3214_4344 376
186 3300046501 Ga0495607_0110933 Ga0495607_0110933_204_1334 376
187 3300046506 Ga0495583_0000629 Ga0495583_0000629_27293_28423 376
188 3300046507 Ga0495606_0000456 Ga0495606_0000456_35635_36765 376
189 3300046512 Ga0495610_0000344 Ga0495610_0000344_32467_33597 376
190 3300046512 Ga0495610_0009149 Ga0495610_0009149_1211_2341 376
191 3300046515 Ga0495620_0000552 Ga0495620_0000552_10282_11412 376
192 3300046517 Ga0495630_0072025 Ga0495630_0072025_1300_2430 376
193 3300046518 Ga0495631_0010307 Ga0495631_0010307_2575_3705 376
194 3300046519 Ga0495632_0031102 Ga0495632_0031102_815_1945 376
195 3300046520 Ga0495637_0002859 Ga0495637_0002859_4666_5796 376
196 3300046520 Ga0495637_0008461 Ga0495637_0008461_1214_2344 376
197 3300046520 Ga0495637_0016772 Ga0495637_0016772_513_1643 376
198 3300046522 Ga0495643_0026823 Ga0495643_0026823_1554_2684 376
199 3300046522 Ga0495643_0034768 Ga0495643_0034768_1211_2341 376
200 3300046524 Ga0495648_0004909 Ga0495648_0004909_1228_2358 376
201 3300046524 Ga0495648_0036304 Ga0495648_0036304_330_1460 376
202 3300046524 Ga0495648_0040567 Ga0495648_0040567_594_1724 376
203 3300046526 Ga0495666_0000043 Ga0495666_0000043_18455_19585 376
204 3300046528 Ga0495642_0000427 Ga0495642_0000427_2749_3879 376
205 3300046530 Ga0495654_0000805 Ga0495654_0000805_3226_4356 376
206 3300046530 Ga0495654_0001486 Ga0495654_0001486_183_1313 376
207 3300046530 Ga0495654_0003399 Ga0495654_0003399_6124_7254 376
208 3300046530 Ga0495654_0039179 Ga0495654_0039179_1199_2329 376
209 3300046557 Ga0495622_0002436 Ga0495622_0002436_6127_7257 376
210 3300046557 Ga0495622_0046975 Ga0495622_0046975_147_1277 376
211 3300046558 Ga0495633_0048237 Ga0495633_0048237_183_1313 376
212 3300046660 Ga0495625_0001734 Ga0495625_0001734_19702_20832 376
213 3300046674 Ga0495588_0000737 Ga0495588_0000737_6188_7318 376
214 3300046674 Ga0495588_0028584 Ga0495588_0028584_1207_2337 376
215 3300046679 Ga0495623_0016081 Ga0495623_0016081_3174_4304 376
216 3300046684 Ga0495669_0015706 Ga0495669_0015706_876_2006 376
217 3300046691 Ga0495670_0037359 Ga0495670_0037359_1045_2175 376
218 3300046692 Ga0495671_0000351 Ga0495671_0000351_32339_33469 376
219 3300046692 Ga0495671_0003484 Ga0495671_0003484_742_1872 376
220 3300046692 Ga0495671_0006932 Ga0495671_0006932_149_1279 376
221 3300046692 Ga0495671_0017259 Ga0495671_0017259_1427_2557 376
222 3300046692 Ga0495671_0022413 Ga0495671_0022413_2071_3201 376
223 3300046694 Ga0495649_0000997 Ga0495649_0000997_20841_21971 376
224 3300046694 Ga0495649_0009045 Ga0495649_0009045_327_1457 376
225 3300046694 Ga0495649_0010205 Ga0495649_0010205_2691_3821 376
226 3300046694 Ga0495649_0031657 Ga0495649_0031657_954_2084 376
227 3300046694 Ga0495649_0038020 Ga0495649_0038020_380_1510 376
228 3300046794 Ga0495589_0030622 Ga0495589_0030622_39_1169 376
229 3300046794 Ga0495589_0041526 Ga0495589_0041526_766_1896 376
230 3300046794 Ga0495589_0059288 Ga0495589_0059288_716_1846 376
231 3300046809 Ga0495600_0013830 Ga0495600_0013830_572_1702 376
232 3300046810 Ga0495660_0052900 Ga0495660_0052900_82_1212 376
233 3300047317 Ga0495604_0002127 Ga0495604_0002127_3456_4586 376
234 3300047320 Ga0495672_0001254 Ga0495672_0001254_4352_5482 376
235 3300047320 Ga0495672_0003420 Ga0495672_0003420_5103_6233 376
236 3300047320 Ga0495672_0019916 Ga0495672_0019916_1005_2135 376
237 3300047320 Ga0495672_0048049 Ga0495672_0048049_1346_2476 376
238 3300047320 Ga0495672_0052735 Ga0495672_0052735_1148_2278 376
239 3300047322 Ga0495680_0053805 Ga0495680_0053805_253_1383 376
240 3300047323 Ga0495683_0000077 Ga0495683_0000077_53765_54895 376
241 3300047443 Ga0495687_000610 Ga0495687_000610_28129_29259 376
242 3300047443 Ga0495687_000612 Ga0495687_000612_27619_28749 376
243 3300047444 Ga0495675_0061184 Ga0495675_0061184_472_1602 376
244 3300047469 Ga0495673_0000900 Ga0495673_0000900_19819_20949 376
245 3300047469 Ga0495673_0000929 Ga0495673_0000929_19162_20292 376
246 3300047469 Ga0495673_0003040 Ga0495673_0003040_7489_8619 376
247 3300047469 Ga0495673_0011358 Ga0495673_0011358_1346_2476 376
248 3300047469 Ga0495673_0019012 Ga0495673_0019012_1464_2594 376
249 3300047470 Ga0495681_0000395 Ga0495681_0000395_9997_11127 376
250 3300047470 Ga0495681_0000679 Ga0495681_0000679_479_1627 376
251 3300047470 Ga0495681_0004704 Ga0495681_0004704_5937_7067 376
252 3300047471 Ga0495684_0015080 Ga0495684_0015080_4502_5632 376
253 3300047472 Ga0495686_0001587 Ga0495686_0001587_4825_5955 376
254 3300047673 Ga0495593_0000080 Ga0495593_0000080_33876_35006 376
255 3300048091 Ga0495626_0000055 Ga0495626_0000055_42924_44054 376
256 3300048091 Ga0495626_0000948 Ga0495626_0000948_20850_21980 376
257 3300048091 Ga0495626_0009151 Ga0495626_0009151_262_1392 376
258 3300048913 Ga0496110_0000097 Ga0496110_0000097_11500_12630 376
259 3300048921 Ga0496118_0030873 Ga0496118_0030873_1437_2567 376
260 3300048927 Ga0496124_0000723 Ga0496124_0000723_40696_41826 376
261 3300048927 Ga0496124_0015711 Ga0496124_0015711_519_1649 376
262 3300049459 Ga0495678_013962 Ga0495678_013962_1028_2158 376
263 3300049460 Ga0495682_0001055 Ga0495682_0001055_3356_4486 376
264 3300049460 Ga0495682_0010197 Ga0495682_0010197_2488_3618 376
265 3300049569 Ga0501032_0009166 Ga0501032_0009166_1728_2858 376
266 3300050516 nmdc:mga0sz30_6809_c2 nmdc:mga0sz30_6809_c2_901_2031 376
267 3300005331 Ga0070670_100000018 Ga0070670_100000018160 377
268 3300005331 Ga0070670_100000018 Ga0070670_100000018197 377
269 3300005335 Ga0070666_10002359 Ga0070666_100023596 377
270 3300005335 Ga0070666_10018568 Ga0070666_100185683 377
271 3300005353 Ga0070669_100005601 Ga0070669_1000056018 377
272 3300005353 Ga0070669_100008374 Ga0070669_1000083743 377
273 3300005355 Ga0070671_100000084 Ga0070671_10000008441 377
274 3300005355 Ga0070671_100000755 Ga0070671_1000007554 377
275 3300005365 Ga0070688_100003097 Ga0070688_1000030979 377
276 3300005365 Ga0070688_100072756 Ga0070688_1000727562 377
277 3300005367 Ga0070667_100000002 Ga0070667_100000002136 377
278 3300005367 Ga0070667_100000002 Ga0070667_10000000299 377
279 3300005466 Ga0070685_10000003 Ga0070685_1000000319 377
280 3300005466 Ga0070685_10000009 Ga0070685_10000009120 377
281 3300005548 Ga0070665_100023808 Ga0070665_1000238083 377
282 3300005548 Ga0070665_100252901 Ga0070665_1002529012 377
283 3300005617 Ga0068859_100033473 Ga0068859_1000334733 377
284 3300005618 Ga0068864_100000002 Ga0068864_100000002344 377
285 3300005618 Ga0068864_100000002 Ga0068864_100000002381 377
286 3300005842 Ga0068858_100090964 Ga0068858_1000909643 377
287 3300005843 Ga0068860_100000450 Ga0068860_10000045021 377
288 3300005843 Ga0068860_100000499 Ga0068860_10000049917 377
289 3300005844 Ga0068862_100001455 Ga0068862_10000145515 377
290 3300005844 Ga0068862_100001709 Ga0068862_1000017095 377
291 3300006931 Ga0097620_100033473 Ga0097620_1000334733 377
292 3300009101 Ga0105247_10011594 Ga0105247_100115944 377
293 3300009177 Ga0105248_10466998 Ga0105248_104669981 377
294 3300009553 Ga0105249_10076714 Ga0105249_100767144 377
295 3300014325 Ga0163163_10001034 Ga0163163_1000103410 377
296 3300025900 Ga0207710_10008617 Ga0207710_100086174 377
297 3300025923 Ga0207681_10003997 Ga0207681_100039978 377
298 3300025923 Ga0207681_10008673 Ga0207681_100086732 377
299 3300025925 Ga0207650_10000002 Ga0207650_10000002339 377
300 3300025925 Ga0207650_10000002 Ga0207650_10000002376 377
301 3300025931 Ga0207644_10000406 Ga0207644_1000040620 377
302 3300025931 Ga0207644_10000673 Ga0207644_100006734 377
303 3300025941 Ga0207711_10000765 Ga0207711_1000076517 377
304 3300025941 Ga0207711_10001343 Ga0207711_1000134321 377
305 3300025961 Ga0207712_10199712 Ga0207712_101997122 377
306 3300025986 Ga0207658_10000001 Ga0207658_100000011013 377
307 3300025986 Ga0207658_10000001 Ga0207658_10000001976 377
308 3300026035 Ga0207703_10147294 Ga0207703_101472943 377
309 3300026088 Ga0207641_10019517 Ga0207641_100195174 377
310 3300026088 Ga0207641_10039803 Ga0207641_100398034 377
311 3300026095 Ga0207676_10000001 Ga0207676_10000001339 377
312 3300026095 Ga0207676_10000001 Ga0207676_10000001376 377
313 3300028379 Ga0268266_10001511 Ga0268266_1000151113 377
314 3300028379 Ga0268266_10023782 Ga0268266_100237824 377
315 3300028380 Ga0268265_10000455 Ga0268265_1000045510 377
316 3300028380 Ga0268265_10006634 Ga0268265_100066346 377
317 3300028381 Ga0268264_10000004 Ga0268264_10000004339 377
318 3300028381 Ga0268264_10000004 Ga0268264_10000004394 377
319 3300031251 Ga0265327_10000229 Ga0265327_1000022987 377
320 3300046506 Ga0495583_0000026 Ga0495583_0000026_60886_62049 377
321 3300053119 Ga0500595_013658 Ga0500595_013658_481_1632 377
322 3300053138 Ga0500564_002293 Ga0500564_002293_4636_5787 377
323 3300009101 Ga0105247_10011320 Ga0105247_100113204 379
324 3300009553 Ga0105249_10012077 Ga0105249_100120774 379
325 3300014968 Ga0157379_10064972 Ga0157379_100649722 379
326 3300031250 Ga0265331_10006478 Ga0265331_100064786 379
327 3300031251 Ga0265327_10000229 Ga0265327_1000022920 379
328 3300053138 Ga0500564_007177 Ga0500564_007177_3103_4278 379
329 3300025303 Ga0209051_1019873 Ga0209051_10198732 380
330 3300044684 Ga0466966_0148019 Ga0466966_0148019_172_1371 380
331 3300046491 Ga0495584_0000123 Ga0495584_0000123_25393_26541 380
332 3300047320 Ga0495672_0000738 Ga0495672_0000738_25651_26823 381
333 3300006058 Ga0075432_10002337 Ga0075432_100023375 383
334 3300013102 Ga0157371_10000300 Ga0157371_1000030022 386
335 3300013102 Ga0157371_10000300 Ga0157371_1000030037 386
336 3300013104 Ga0157370_10000340 Ga0157370_1000034024 386
337 3300013104 Ga0157370_10000340 Ga0157370_1000034039 386
338 3300046474 Ga0495605_0000427 Ga0495605_0000427_9590_10759 386
339 3300046474 Ga0495605_0002182 Ga0495605_0002182_3940_5109 386
340 3300006058 Ga0075432_10000043 Ga0075432_1000004310 388
341 3300027907 Ga0207428_10002473 Ga0207428_1000247312 388
342 3300042137 Ga0450902_007691 Ga0450902_007691_163_1401 388
343 3300044694 Ga0466963_0016231 Ga0466963_0016231_1740_2912 388
344 3300045976 Ga0466967_0109307 Ga0466967_0109307_1316_2488 388
345 3300046474 Ga0495605_0000177 Ga0495605_0000177_12290_13462 388
346 3300046474 Ga0495605_0000410 Ga0495605_0000410_11081_12253 388
347 3300046491 Ga0495584_0007370 Ga0495584_0007370_1257_2429 388
348 3300046501 Ga0495607_0000339 Ga0495607_0000339_20733_21905 388
349 3300046501 Ga0495607_0000683 Ga0495607_0000683_14763_15935 388
350 3300046501 Ga0495607_0001100 Ga0495607_0001100_2647_3819 388
351 3300046501 Ga0495607_0015131 Ga0495607_0015131_548_1720 388
352 3300046513 Ga0495616_0000055 Ga0495616_0000055_76386_77558 388
353 3300046522 Ga0495643_0000395 Ga0495643_0000395_31615_32787 388
354 3300046538 Ga0495609_0000092 Ga0495609_0000092_29472_30644 388
355 3300046665 Ga0495661_0000227 Ga0495661_0000227_37039_38211 388
356 3300046665 Ga0495661_0004478 Ga0495661_0004478_4641_5813 388
357 3300046665 Ga0495661_0004947 Ga0495661_0004947_4242_5414 388
358 3300046694 Ga0495649_0038956 Ga0495649_0038956_473_1645 388
359 3300046794 Ga0495589_0000060 Ga0495589_0000060_75702_76874 388
360 3300046794 Ga0495589_0000072 Ga0495589_0000072_68412_69584 388
361 3300046810 Ga0495660_0000083 Ga0495660_0000083_47198_48370 388
362 3300046810 Ga0495660_0016591 Ga0495660_0016591_643_1815 388
363 3300047317 Ga0495604_0067278 Ga0495604_0067278_300_1478 388
364 3300047320 Ga0495672_0000577 Ga0495672_0000577_6273_7445 388
365 3300047443 Ga0495687_000157 Ga0495687_000157_75702_76874 388
366 3300047443 Ga0495687_000231 Ga0495687_000231_42415_43587 388
367 3300047445 Ga0495677_0000022 Ga0495677_0000022_26561_27733 388
368 3300048091 Ga0495626_0000221 Ga0495626_0000221_31610_32782 388
369 3300048091 Ga0495626_0001104 Ga0495626_0001104_3163_4335 388
370 iso_pu_bacteria 644736347 644750538 388
371 iso_pu_bacteria 2599185239 2599735023 389
372 iso_pu_bacteria 2744054900 2746091371 389
373 iso_pu_bacteria 2744054901 2746097804 389
374 iso_pu_bacteria 2818991452 2819631931 389
375 iso_pu_bacteria 2842324504 2842325309 389
376 iso_pu_bacteria 2842348783 2842349588 389
377 iso_pu_bacteria 2842454564 2842455174 389
378 iso_pu_bacteria 2870068957 2870072562 389
379 iso_pu_bacteria 2900634093 2900640211 389
380 iso_pu_bacteria 2928170801 2928172099 389
381 iso_pu_bacteria 8018845410 8018849584 389
382 iso_pu_bacteria 8021120328 8021120377 389
383 3300028573 Ga0265334_10000175 Ga0265334_1000017513 390
384 3300037471 Ga0395905_0036797 Ga0395905_0036797_2583_3779 390
385 3300046457 Ga0495590_0002921 Ga0495590_0002921_3010_4206 390
386 3300049581 Ga0501047_0001004 Ga0501047_0001004_25704_26909 390
387 3300049822 Ga0501035_0013769 Ga0501035_0013769_5523_6728 390
388 3300049823 Ga0501044_0063948 Ga0501044_0063948_829_2034 390
389 iso_pu_bacteria 2513237150 2513953703 390
390 iso_pu_bacteria 2513237165 2514040400 390
391 3300003758 Ga0055532_1000390 Ga0055532_100039021 391
392 3300003760 Ga0055527_1000103 Ga0055527_100010334 391
393 3300003761 Ga0055535_1000209 Ga0055535_100020934 391
394 3300003762 Ga0055542_1003803 Ga0055542_10038033 391
395 3300025228 Ga0209672_100062 Ga0209672_10006271 391
396 3300025229 Ga0209147_100078 Ga0209147_10007871 391
397 3300025242 Ga0209258_100108 Ga0209258_10010871 391
398 3300025254 Ga0209148_1000610 Ga0209148_100061022 391
399 3300025272 Ga0209455_1000251 Ga0209455_100025128 391
400 3300044650 Ga0466986_0060449 Ga0466986_0060449_185_1360 391
401 3300044694 Ga0466963_0082682 Ga0466963_0082682_540_1718 391
402 3300044842 Ga0466957_0024564 Ga0466957_0024564_1246_2424 391
403 iso_pu_bacteria 2513237165 2514040383 391
404 3300003758 Ga0055532_1000413 Ga0055532_100041313 392
405 3300025225 Ga0209566_100168 Ga0209566_10016811 392
406 3300025226 Ga0209674_103384 Ga0209674_1033841 392
407 3300025229 Ga0209147_100034 Ga0209147_10003413 392
408 3300031548 Ga0307408_100009073 Ga0307408_1000090733 392
409 3300047319 Ga0495674_0117295 Ga0495674_0117295_126_1307 392
410 3300049581 Ga0501047_0125006 Ga0501047_0125006_1023_2264 392
411 3300044684 Ga0466966_0048280 Ga0466966_0048280_215_1441 393
412 3300044693 Ga0466961_0040818 Ga0466961_0040818_466_1692 393
413 3300044842 Ga0466957_0131081 Ga0466957_0131081_273_1499 393
414 3300003758 Ga0055532_1000402 Ga0055532_10004029 394
415 3300003760 Ga0055527_1000075 Ga0055527_10000759 394
416 3300003761 Ga0055535_1000127 Ga0055535_10001279 394
417 3300003762 Ga0055542_1001334 Ga0055542_10013348 394
418 3300009093 Ga0105240_10326769 Ga0105240_103267691 394
419 3300025228 Ga0209672_100101 Ga0209672_10010154 394
420 3300025229 Ga0209147_100144 Ga0209147_10014435 394
421 3300025242 Ga0209258_100227 Ga0209258_10022754 394
422 3300025254 Ga0209148_1000558 Ga0209148_100055816 394
423 3300025256 Ga0209759_1007056 Ga0209759_10070564 394
424 3300025272 Ga0209455_1000222 Ga0209455_10002227 394
425 3300025294 Ga0209025_1000034 Ga0209025_1000034296 394
426 3300025303 Ga0209051_1009206 Ga0209051_10092065 394
427 3300025949 Ga0207667_10024130 Ga0207667_100241302 394
428 3300048905 Ga0496102_0346131 Ga0496102_0346131_190_1377 394
429 3300048919 Ga0496116_0002356 Ga0496116_0002356_14631_15818 394
430 iso_pu_bacteria 2981990288 2981994898 394
431 iso_pu_bacteria 641736154 642417592 394
432 3300003187 JGI25151J46595_10019161 JGI25151J46595_100191613 395
433 3300025294 Ga0209025_1000034 Ga0209025_1000034279 395
434 3300048919 Ga0496116_0011536 Ga0496116_0011536_1189_2391 395
435 3300049571 Ga0501034_0000384 Ga0501034_0000384_40177_41379 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

383

439

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6eo2-assembly1.cif.gz_A conformational dynamism for dna interaction in salmonella typhimurium rcsb response regulator. s207c crossed 0.9583 333 387
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9572 332 392
4wu4-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 22bp dna 0.9536 332 392
5o8y-assembly1.cif.gz_D conformational dynamism for dna interaction in salmonella typhimurium rcsb response regulator. 0.9518 333 389
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.9481 332 392
ID Description Score Start End Superfamily
af_Q11028_1077_1158_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9643 332 390 1.10.10.10
af_P52106_149_214_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9543 333 386 1.10.10.10
4if4B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9405 333 390 1.10.10.10
3ulqB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9289 333 387 1.10.10.10
4hyeB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9276 333 390 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A4R3NW87-F1-model_v4 DNA-binding CsgD family transcriptional regulator 0.8359 246 388 GO:0003677
GO:0006355
AF-A0A5C5SII9-F1-model_v4 HTH luxR-type domain-containing protein 0.831 197 390 GO:0003677
GO:0006355
AF-A0A442B0A6-F1-model_v4 Helix-turn-helix transcriptional regulator 0.825 191 393 GO:0003677
GO:0006355
AF-A0A7Y3GB13-F1-model_v4 PAS domain-containing protein 0.8231 205 389 GO:0003677
GO:0006355
AF-A0A318B9R9-F1-model_v4 deleted 0.8107 197 390

Feature Viewer

pLDDT pTM Quality
80.46 0.53 Medium
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Predicted Structure (AlphaFold2)

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