F437415

General Info

Members Datasets Scaffolds Average Seq Length
410 211 318 520

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3007718800|3007723557
Length 583
Sequence FLVVQVRLRSRWAQINGQAERDKSPEKGFTVNCKETMTPDWGAAPNLLPILVIMFASTTFRTTFKEKLMLGRNSQEPTANHGRRNTAVKAGSTFRLTVSFMVVVVVAFLAVESWRTWRDYRSVFASARDSATNLARATAQHAEDTIRQVDVLTAGLAERVEGDGLQNLDVARIHKLLVQQSKIMPQLHGLFIYGPDGHWIVTDKEVTPEMANNADRDYFQYHRTHDDRQVRIGRVVESRSTHDLIIPISRRLNNPDGSFAGVLLGTVKVSYFVDYYGDFRIDDKGALVLAMRDGTILVRRPFIASVVGKSLANSEIFKTYLPSSNEGIAQIRAVVDGTERLYGYRALTTYPLVVEAGLSKDSITAPWRRDLLKNGFVLIFLILVLACFGLIVLNQLRQRMAMEREIRSAHQAMRDMALTDSLTGLGNRRRLDTALADEIRLARRQNSPLSLIMLDVDHFKRYNDHYGHAAGDDCLSAVGRAIQQAIKRPGDLAVRYGGEEFTVLLPNTNNAGAIQVAEDILQAIRLLELEHTGHPLGYVTASAGIATRRPVDESVTMAMLLKSADMCLYQAKRLGRNRWCSTD

Samples

Sample ID Description Type Environment
1 2511231010 Pseudomonas sp. GM25 Isolate Nodule
2 2511231021 Pseudomonas sp. GM78 Isolate Nodule
3 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
4 2554235231 Pseudomonas putida MTCC 5279 Isolate Unclassified
5 2599185188 Pseudomonas sp. NFACC45 Isolate Rhizoplane
6 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
7 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
8 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
9 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
10 2599185300 Pseudomonas sp. NFACC39-1 Isolate Rhizoplane
11 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
12 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
13 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
14 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
15 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
16 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
17 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
18 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
19 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
20 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
21 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
22 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
23 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
24 2599185317 Pseudomonas sp. NFACC06-1 Isolate Rhizoplane
25 2599185318 Pseudomonas sp. NFACC13-1 Isolate Rhizoplane
26 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
27 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
28 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
29 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
30 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
31 2599185324 Pseudomonas sp. NFACC46-3 Isolate Rhizoplane
32 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
33 2600254930 Pseudomonas sp. NFIX10 Isolate Rhizoplane
34 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
35 2600255318 Pseudomonas putida NFIX47 Isolate Rhizoplane
36 2603880185 Pseudomonas sp. NFIX46 Isolate Rhizoplane
37 2603880199 Pseudomonas sp. NFIX49 Isolate Rhizoplane
38 2623620443 Pseudomonas sp. DR 5-09 Isolate Unclassified
39 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
40 2651869719 Genome Sequence of Pseudomonas fluorescens UM270 Isolate Rhizosphere
41 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
42 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
43 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
44 2713897148 Pseudomonas fluorescens SF39a Isolate Rhizosphere
45 2713897149 Pseudomonas fluorescens SF4c Isolate Rhizosphere
46 2718217725 Pseudomonas fluorescens CREA-C16 Isolate Rhizosphere
47 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
48 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
49 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
50 2791355520 Pseudomonas sp. s211(2017) Isolate Unclassified
51 2806310737 Pseudomonas mosselii BS011 Isolate Unclassified
52 2806310745 Pseudomonas mosselii PtA1 Isolate Unclassified
53 2808606361 Pseudomonas sp. SJZ075 Isolate Rhizosphere
54 2808606376 Pseudomonas sp. SJZ074 Isolate Rhizosphere
55 2808606378 Pseudomonas sp. SJZ078 Isolate Rhizosphere
56 2808606380 Pseudomonas sp. SJZ085 Isolate Rhizosphere
57 2808606383 Pseudomonas sp. SJZ124 Isolate Rhizosphere
58 2808606389 Pseudomonas sp. SJZ101 Isolate Rhizosphere
59 2825651385 Pseudomonas brassicacearum L13-6-12 Isolate Rhizosphere
60 2842832357 Pseudomonas sp. R-72164 Isolate Unclassified
61 2842843487 Pseudomonas sp. R-72074 Isolate Unclassified
62 2842854478 Pseudomonas sp. R-71998 Isolate Unclassified
63 2878029506 Pseudomonas fluorescens DR397 Isolate Rhizosphere
64 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
65 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
66 2919063839 Pseudomonas pharyngis 1098 Isolate Rhizosphere
67 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
68 2919385768 Pseudomonas sp. 2957 Isolate Unclassified
69 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
70 2919487758 Pseudomonas koreensis 3441 Isolate Unclassified
71 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
72 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
73 2931369376 Pseudomonas fluorescens DR133 Isolate Rhizosphere
74 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
75 2969304461 Pseudomonas sp. R84 Isolate Rhizosphere
76 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
77 2988728565 Pseudomonas corrugata RM1-1-4 Isolate Rhizosphere
78 2998139840 Pseudomonas iranensis SWRI54 Isolate Rhizosphere
79 3007718800 Pseudomonas fluorescens BW11P2 Isolate Rhizosphere
80 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
81 3007861166 Pseudomonas hamedanensis SWRI65 Isolate Rhizosphere
82 3007866637 Pseudomonas marvdashtae SWRI102 Isolate Rhizosphere
83 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
84 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
85 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
86 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
87 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
88 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
89 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
90 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
91 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
92 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
93 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
94 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
95 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
96 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
97 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
98 3300012498 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410 Metagenome Rhizosphere
99 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
100 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
101 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
102 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
103 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
104 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
105 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
106 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
107 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
117 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
118 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
121 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
122 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
123 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
124 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
127 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
128 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
129 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
130 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
131 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
132 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
133 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
134 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
135 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
136 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
137 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
138 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
139 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
140 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
141 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
142 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
143 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
144 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
145 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
146 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
147 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
148 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
149 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
150 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
151 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
152 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
153 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
154 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
155 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
156 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
157 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
158 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
159 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
160 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
161 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
162 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
163 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
164 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
165 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
166 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
167 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
168 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
169 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
170 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
171 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
172 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
173 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
174 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
175 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
176 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
177 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
178 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
179 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
180 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
181 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
182 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
183 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
184 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
185 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
186 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
187 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
188 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
189 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
190 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
191 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
192 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
193 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
194 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
195 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
196 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
197 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
198 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
199 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
200 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
201 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
202 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
203 8029995093 Pseudomonas atacamensis SM1 Isolate Rhizosphere
204 8052494512 Pseudomonas putida LD6 Isolate Unclassified
205 8054929484 Pseudomonas vlassakiae RW4S1 Isolate Rhizosphere
206 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
207 8056120720 Pseudomonas maumuensis COW77 Isolate Rhizosphere
208 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere
209 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere
210 8056166840 Pseudomonas triticicola SWRI88 Isolate Rhizosphere
211 8056172158 Pseudomonas ekonensis COR58 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.56
Metatranscriptomes 0
Isolates 22.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.63
Nodule 1.46
Rhizoplane 9.02
Rhizosphere 73.66
Stem 0
Stem Tuber 0
Unclassified 11.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055536_1000013 3300003781 Bacteria 240693
2 Ga0055530_10000010 3300003791 Bacteria 173678
3 Ga0055530_10000212 3300003791 Bacteria 52572
4 Ga0055540_1000008 3300003792 Bacteria 309635
5 Ga0055540_1000032 3300003792 Bacteria 173678
6 Ga0055531_10000150 3300003794 Bacteria 80520
7 Ga0065714_10002248 3300005288 Bacteria 43256
8 Ga0065714_10080759 3300005288 Bacteria 2417
9 Ga0065704_10071340 3300005289 Bacteria 11625
10 Ga0075432_10000343 3300006058 Bacteria 13343
11 Ga0099823_1000004 3300006944 Bacteria 176518
12 Ga0079104_1000128 3300006946 Bacteria 108656
13 Ga0105251_10009438 3300009011 Bacteria 5761
14 Ga0105251_10012364 3300009011 Bacteria 4831
15 Ga0105251_10025860 3300009011 Bacteria 2996
16 Ga0105251_10028543 3300009011 Bacteria 2818
17 Ga0105251_10039038 3300009011 Bacteria 2321
18 Ga0105244_10003547 3300009036 Bacteria 11082
19 Ga0105244_10005601 3300009036 Bacteria 8302
20 Ga0105244_10010317 3300009036 Bacteria 5671
21 Ga0105244_10030157 3300009036 Bacteria 2888
22 Ga0105250_10001933 3300009092 Bacteria 10765
23 Ga0105243_10000736 3300009148 Bacteria 31344
24 Ga0105243_10007907 3300009148 Bacteria 8168
25 Ga0105246_10011534 3300011119 Bacteria 5486
26 Ga0157345_1000004 3300012498 Bacteria 80365
27 Ga0157373_10004600 3300013100 Bacteria 10374
28 Ga0157373_10022372 3300013100 Bacteria 4586
29 Ga0157371_10000131 3300013102 Bacteria 113432
30 Ga0157371_10004444 3300013102 Bacteria 12239
31 Ga0157371_10010726 3300013102 Bacteria 7116
32 Ga0157369_10000286 3300013105 Bacteria 67677
33 Ga0157369_10001559 3300013105 Bacteria 28058
34 Ga0157372_10108053 3300013307 Bacteria 3184
35 Ga0157375_10181835 3300013308 Bacteria 2254
36 Ga0182008_10010863 3300014497 Bacteria 4859
37 Ga0182006_1000325 3300015261 Bacteria 41285
38 Ga0182006_1012195 3300015261 Bacteria 3764
39 Ga0182006_1020861 3300015261 Bacteria 2741
40 Ga0182006_1027537 3300015261 Bacteria 2318
41 Ga0182006_1042558 3300015261 Bacteria 1779
42 Ga0182007_10001645 3300015262 Bacteria 11820
43 Ga0209675_1006627 3300025291 Bacteria 4606
44 Ga0209676_1000002 3300025292 Bacteria 1732948
45 Ga0209676_1000020 3300025292 Bacteria 617256
46 Ga0209676_1001160 3300025292 Bacteria 28661
47 Ga0209676_1004087 3300025292 Bacteria 8350
48 Ga0209050_1000006 3300025298 Bacteria 1359702
49 Ga0209050_1000043 3300025298 Bacteria 398654
50 Ga0209051_1000001 3300025303 Bacteria 1732974
51 Ga0209051_1000030 3300025303 Bacteria 398654
52 Ga0209257_1000029 3300025304 Bacteria 695617
53 Ga0209257_1007316 3300025304 Bacteria 6708
54 Ga0207696_1000006 3300025711 Bacteria 616498
55 Ga0207696_1000844 3300025711 Bacteria 19465
56 Ga0207696_1001877 3300025711 Bacteria 10752
57 Ga0207696_1020702 3300025711 Bacteria 2116
58 Ga0207655_1000076 3300025728 Bacteria 226359
59 Ga0207655_1000077 3300025728 Bacteria 219418
60 Ga0207655_1011707 3300025728 Bacteria 5193
61 Ga0207713_1000131 3300025735 Bacteria 114570
62 Ga0207713_1000143 3300025735 Bacteria 107175
63 Ga0207713_1012355 3300025735 Bacteria 4573
64 Ga0207713_1020409 3300025735 Bacteria 3211
65 Ga0207713_1035869 3300025735 Bacteria 2135
66 Ga0207709_10000565 3300025935 Bacteria 31347
67 Ga0209281_1000040 3300027111 Bacteria 353441
68 Ga0209389_1000006 3300027296 Bacteria 231635
69 Ga0314311_1184894 3300030733 Bacteria 3078
70 Ga0307408_100021516 3300031548 Bacteria 4365
71 Ga0307408_100027085 3300031548 Bacteria 3947
72 Ga0307408_100093436 3300031548 Bacteria 2275
73 Ga0307405_10017290 3300031731 Bacteria 3953
74 Ga0307405_10093849 3300031731 Bacteria 1994
75 Ga0307406_10030713 3300031901 Bacteria 3264
76 Ga0307412_10006645 3300031911 Bacteria 6552
77 Ga0307412_10027363 3300031911 Bacteria 3554
78 Ga0307412_10045954 3300031911 Bacteria 2857
79 Ga0307412_10057346 3300031911 Bacteria 2599
80 Ga0307416_100058828 3300032002 Bacteria 3119
81 Ga0307414_10048967 3300032004 Bacteria 2919
82 Ga0307414_10180982 3300032004 Bacteria 1695
83 Ga0307411_10049256 3300032005 Bacteria 2736
84 Ga0237819_01332 3300038705 Bacteria 6544
85 Ga0439438_000077 3300041405 Bacteria 45928
86 Ga0439438_000113 3300041405 Bacteria 37577
87 Ga0439438_000205 3300041405 Bacteria 26994
88 Ga0439438_000212 3300041405 Bacteria 26664
89 Ga0439438_000478 3300041405 Bacteria 18095
90 Ga0439438_001652 3300041405 Bacteria 9788
91 Ga0439438_002096 3300041405 Bacteria 8608
92 Ga0439447_004843 3300041407 Bacteria 4566
93 Ga0439447_010163 3300041407 Bacteria 2805
94 Ga0439466_0016061 3300041411 Bacteria 2710
95 Ga0439431_0000286 3300041997 Bacteria 10408
96 Ga0439445_0000499 3300042004 Bacteria 7990
97 Ga0439432_001140 3300042006 Bacteria 10068
98 Ga0439432_009618 3300042006 Bacteria 3368
99 Ga0439432_017767 3300042006 Bacteria 2384
100 Ga0439451_003074 3300042009 Bacteria 3391
101 Ga0439452_000107 3300042010 Bacteria 67397
102 Ga0439452_004581 3300042010 Bacteria 4603
103 Ga0439452_011617 3300042010 Bacteria 2523
104 Ga0439456_000024 3300042013 Bacteria 58893
105 Ga0439456_000373 3300042013 Bacteria 10079
106 Ga0439456_003403 3300042013 Bacteria 3222
107 Ga0450911_000010 3300042115 Bacteria 149605
108 Ga0450902_000761 3300042137 Bacteria 4150
109 Ga0450902_001730 3300042137 Bacteria 3012
110 Ga0450903_005754 3300042138 Bacteria 2069
111 Ga0450906_000007 3300042145 Bacteria 42541
112 Ga0439446_0001547 3300042156 Bacteria 5276
113 Ga0495617_001949 3300046452 Bacteria 8651
114 Ga0495617_003838 3300046452 Bacteria 5544
115 Ga0495627_000429 3300046453 Bacteria 36476
116 Ga0495627_000995 3300046453 Bacteria 19071
117 Ga0495627_001105 3300046453 Bacteria 17589
118 Ga0495590_0007721 3300046457 Bacteria 4132
119 Ga0495591_000008 3300046458 Bacteria 353558
120 Ga0495591_000018 3300046458 Bacteria 232216
121 Ga0495591_000120 3300046458 Bacteria 86214
122 Ga0495591_000369 3300046458 Bacteria 38563
123 Ga0495591_003598 3300046458 Bacteria 7905
124 Ga0495591_019163 3300046458 Bacteria 2297
125 Ga0495638_0000125 3300046460 Bacteria 125288
126 Ga0495638_0000527 3300046460 Bacteria 44573
127 Ga0495653_0001124 3300046463 Bacteria 20602
128 Ga0495650_0000592 3300046471 Bacteria 50128
129 Ga0495650_0002152 3300046471 Bacteria 16727
130 Ga0495650_0004717 3300046471 Bacteria 9182
131 Ga0495650_0006943 3300046471 Bacteria 6925
132 Ga0495650_0008682 3300046471 Bacteria 5886
133 Ga0495650_0009781 3300046471 Bacteria 5420
134 Ga0495605_0000801 3300046474 Bacteria 22450
135 Ga0495605_0001098 3300046474 Bacteria 18037
136 Ga0495605_0017579 3300046474 Bacteria 3846
137 Ga0495584_0004310 3300046491 Bacteria 7664
138 Ga0495584_0017000 3300046491 Bacteria 3706
139 Ga0495584_0043947 3300046491 Bacteria 2255
140 Ga0495584_0044634 3300046491 Bacteria 2236
141 Ga0495585_0000072 3300046492 Bacteria 102939
142 Ga0495585_0000117 3300046492 Bacteria 85886
143 Ga0495585_0004264 3300046492 Bacteria 9313
144 Ga0495596_0000005 3300046500 Bacteria 163644
145 Ga0495596_0000228 3300046500 Bacteria 38161
146 Ga0495596_0037800 3300046500 Bacteria 1908
147 Ga0495607_0000013 3300046501 Bacteria 189755
148 Ga0495607_0000037 3300046501 Bacteria 138869
149 Ga0495607_0000333 3300046501 Bacteria 48937
150 Ga0495607_0000579 3300046501 Bacteria 35607
151 Ga0495607_0000844 3300046501 Bacteria 28996
152 Ga0495607_0000847 3300046501 Bacteria 28896
153 Ga0495607_0002877 3300046501 Bacteria 13600
154 Ga0495607_0004049 3300046501 Bacteria 10989
155 Ga0495607_0004813 3300046501 Bacteria 9847
156 Ga0495607_0014336 3300046501 Bacteria 5165
157 Ga0495607_0033794 3300046501 Bacteria 3109
158 Ga0495583_0000124 3300046506 Bacteria 130757
159 Ga0495583_0000356 3300046506 Bacteria 71830
160 Ga0495583_0001633 3300046506 Bacteria 21857
161 Ga0495583_0001680 3300046506 Bacteria 21397
162 Ga0495583_0011954 3300046506 Bacteria 4951
163 Ga0495606_0000013 3300046507 Bacteria 292850
164 Ga0495606_0000081 3300046507 Bacteria 160491
165 Ga0495606_0000634 3300046507 Bacteria 55249
166 Ga0495606_0010010 3300046507 Bacteria 7928
167 Ga0495606_0028051 3300046507 Bacteria 3977
168 Ga0495610_0014478 3300046512 Bacteria 4630
169 Ga0495610_0018161 3300046512 Bacteria 3980
170 Ga0495610_0051580 3300046512 Bacteria 2001
171 Ga0495616_0000166 3300046513 Bacteria 57340
172 Ga0495616_0000472 3300046513 Bacteria 30546
173 Ga0495616_0018058 3300046513 Bacteria 3881
174 Ga0495616_0024864 3300046513 Bacteria 3206
175 Ga0495620_0000006 3300046515 Bacteria 273098
176 Ga0495620_0000127 3300046515 Bacteria 62010
177 Ga0495620_0002527 3300046515 Bacteria 10595
178 Ga0495631_0000013 3300046518 Bacteria 109794
179 Ga0495631_0002833 3300046518 Bacteria 9631
180 Ga0495631_0006278 3300046518 Bacteria 6152
181 Ga0495631_0009122 3300046518 Bacteria 4967
182 Ga0495631_0024350 3300046518 Bacteria 2794
183 Ga0495632_0000037 3300046519 Bacteria 158699
184 Ga0495632_0000074 3300046519 Bacteria 103136
185 Ga0495632_0000998 3300046519 Bacteria 24682
186 Ga0495632_0001116 3300046519 Bacteria 23033
187 Ga0495632_0001859 3300046519 Bacteria 16983
188 Ga0495632_0002363 3300046519 Bacteria 14433
189 Ga0495632_0004470 3300046519 Bacteria 9493
190 Ga0495632_0005353 3300046519 Bacteria 8505
191 Ga0495632_0006809 3300046519 Bacteria 7293
192 Ga0495632_0009773 3300046519 Bacteria 5749
193 Ga0495637_0000021 3300046520 Bacteria 179141
194 Ga0495637_0000086 3300046520 Bacteria 72165
195 Ga0495637_0001392 3300046520 Bacteria 14426
196 Ga0495637_0002257 3300046520 Bacteria 10696
197 Ga0495637_0004468 3300046520 Bacteria 7240
198 Ga0495637_0018366 3300046520 Bacteria 3244
199 Ga0495643_0001075 3300046522 Bacteria 27242
200 Ga0495643_0004478 3300046522 Bacteria 9757
201 Ga0495643_0005274 3300046522 Bacteria 8782
202 Ga0495643_0036320 3300046522 Bacteria 2708
203 Ga0495643_0041238 3300046522 Bacteria 2517
204 Ga0495644_0000440 3300046523 Bacteria 18306
205 Ga0495644_0000810 3300046523 Bacteria 12890
206 Ga0495648_0000062 3300046524 Bacteria 150125
207 Ga0495648_0000126 3300046524 Bacteria 90189
208 Ga0495648_0000304 3300046524 Bacteria 54690
209 Ga0495648_0002070 3300046524 Bacteria 18984
210 Ga0495648_0010039 3300046524 Bacteria 7256
211 Ga0495654_0001479 3300046530 Bacteria 16094
212 Ga0495654_0003025 3300046530 Bacteria 10474
213 Ga0495654_0003581 3300046530 Bacteria 9455
214 Ga0495654_0003625 3300046530 Bacteria 9393
215 Ga0495609_0000214 3300046538 Bacteria 57759
216 Ga0495597_0000013 3300046542 Bacteria 203829
217 Ga0495597_0000117 3300046542 Bacteria 71911
218 Ga0495597_0000631 3300046542 Bacteria 28721
219 Ga0495597_0009357 3300046542 Bacteria 4845
220 Ga0495597_0010390 3300046542 Bacteria 4551
221 Ga0495597_0017275 3300046542 Bacteria 3398
222 Ga0495622_0000047 3300046557 Bacteria 109638
223 Ga0495633_0000564 3300046558 Bacteria 36203
224 Ga0495668_0000393 3300046616 Bacteria 57684
225 Ga0495611_0005672 3300046648 Bacteria 5325
226 Ga0495625_0000242 3300046660 Bacteria 85764
227 Ga0495625_0003706 3300046660 Bacteria 14920
228 Ga0495661_0000001 3300046665 Bacteria 898372
229 Ga0495661_0000010 3300046665 Bacteria 284261
230 Ga0495661_0000057 3300046665 Bacteria 135044
231 Ga0495661_0013124 3300046665 Bacteria 5576
232 Ga0495661_0020736 3300046665 Bacteria 4287
233 Ga0495661_0061477 3300046665 Bacteria 2230
234 Ga0495670_0002830 3300046691 Bacteria 8585
235 Ga0495671_0001559 3300046692 Bacteria 15207
236 Ga0495671_0003134 3300046692 Bacteria 10279
237 Ga0495671_0005534 3300046692 Bacteria 7385
238 Ga0495671_0007067 3300046692 Bacteria 6427
239 Ga0495671_0008833 3300046692 Bacteria 5658
240 Ga0495671_0010402 3300046692 Bacteria 5156
241 Ga0495671_0012787 3300046692 Bacteria 4572
242 Ga0495671_0016917 3300046692 Bacteria 3886
243 Ga0495649_0000027 3300046694 Bacteria 164157
244 Ga0495649_0000527 3300046694 Bacteria 32513
245 Ga0495649_0026114 3300046694 Bacteria 3251
246 Ga0495589_0000167 3300046794 Bacteria 59964
247 Ga0495589_0001879 3300046794 Bacteria 11900
248 Ga0495589_0004055 3300046794 Bacteria 7849
249 Ga0495660_0000444 3300046810 Bacteria 34560
250 Ga0495660_0002399 3300046810 Bacteria 11962
251 Ga0495660_0004133 3300046810 Bacteria 8847
252 Ga0495660_0005198 3300046810 Bacteria 7807
253 Ga0495660_0022471 3300046810 Bacteria 3602
254 Ga0495672_0002130 3300047320 Bacteria 18556
255 Ga0495672_0002947 3300047320 Bacteria 14996
256 Ga0495672_0002989 3300047320 Bacteria 14872
257 Ga0495672_0003553 3300047320 Bacteria 13271
258 Ga0495672_0003616 3300047320 Bacteria 13109
259 Ga0495672_0012793 3300047320 Bacteria 5830
260 Ga0495672_0015048 3300047320 Bacteria 5266
261 Ga0495672_0039122 3300047320 Bacteria 2886
262 Ga0495676_0003901 3300047321 Bacteria 13558
263 Ga0495683_0000006 3300047323 Bacteria 272409
264 Ga0495683_0000893 3300047323 Bacteria 21046
265 Ga0495683_0002347 3300047323 Bacteria 11499
266 Ga0495683_0002955 3300047323 Bacteria 10054
267 Ga0495679_000107 3300047446 Bacteria 74611
268 Ga0495679_000231 3300047446 Bacteria 47166
269 Ga0495679_001629 3300047446 Bacteria 12502
270 Ga0495673_0000197 3300047469 Bacteria 94703
271 Ga0495673_0002079 3300047469 Bacteria 14624
272 Ga0495673_0005465 3300047469 Bacteria 7673
273 Ga0495673_0005992 3300047469 Bacteria 7230
274 Ga0495673_0038006 3300047469 Bacteria 2193
275 Ga0495681_0000069 3300047470 Bacteria 96229
276 Ga0495681_0000151 3300047470 Bacteria 58502
277 Ga0495681_0000730 3300047470 Bacteria 25245
278 Ga0495681_0000995 3300047470 Bacteria 21696
279 Ga0495681_0002512 3300047470 Bacteria 13070
280 Ga0495686_0012022 3300047472 Bacteria 6082
281 Ga0495626_0000040 3300048091 Bacteria 172784
282 Ga0495626_0000366 3300048091 Bacteria 47327
283 Ga0495626_0003683 3300048091 Bacteria 9707
284 Ga0496110_0091751 3300048913 Bacteria 2718
285 Ga0496114_0010907 3300048917 Bacteria 7241
286 Ga0496116_0001300 3300048919 Bacteria 28548
287 Ga0496117_0000272 3300048920 Bacteria 96736
288 Ga0496117_0001081 3300048920 Bacteria 41293
289 Ga0496117_0001861 3300048920 Bacteria 28461
290 Ga0496117_0006005 3300048920 Bacteria 12502
291 Ga0496118_0000891 3300048921 Bacteria 46918
292 Ga0496118_0002060 3300048921 Bacteria 28346
293 Ga0496119_0000016 3300048922 Bacteria 309806
294 Ga0496119_0018887 3300048922 Bacteria 5106
295 Ga0496122_0000388 3300048925 Bacteria 93611
296 Ga0496122_0018123 3300048925 Bacteria 6523
297 Ga0496122_0023561 3300048925 Bacteria 5420
298 Ga0496123_0000551 3300048926 Bacteria 64142
299 Ga0496123_0001784 3300048926 Bacteria 28354
300 Ga0496123_0004082 3300048926 Bacteria 15712
301 Ga0496123_0011187 3300048926 Bacteria 7810
302 Ga0496124_0000172 3300048927 Bacteria 130204
303 Ga0496124_0007445 3300048927 Bacteria 11630
304 Ga0496124_0007546 3300048927 Bacteria 11540
305 Ga0496124_0012330 3300048927 Bacteria 8442
306 Ga0496124_0031032 3300048927 Bacteria 4734
307 Ga0496125_0000038 3300048928 Bacteria 328120
308 Ga0496125_0000670 3300048928 Bacteria 57161
309 Ga0496126_0018295 3300048929 Bacteria 6951
310 Ga0495678_000222 3300049459 Bacteria 65798
311 Ga0495678_000494 3300049459 Bacteria 38981
312 Ga0495678_000580 3300049459 Bacteria 34677
313 Ga0495678_000919 3300049459 Bacteria 25836
314 Ga0495682_0000085 3300049460 Bacteria 81879
315 Ga0501034_0000055 3300049571 Bacteria 205427
316 nmdc:mga08x19_66842_c1 3300050514 Bacteria 2337
317 Ga0500572_004662 3300053111 Bacteria 3109
318 Ga0500659_0000569 3300053135 Bacteria 24229

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046501 Ga0495607_0000013 Ga0495607_0000013_153406_154881 473
2 3300013100 Ga0157373_10004600 Ga0157373_100046002 474
3 3300013308 Ga0157375_10181835 Ga0157375_101818351 474
4 3300046471 Ga0495650_0006943 Ga0495650_0006943_2266_3750 478
5 3300046474 Ga0495605_0001098 Ga0495605_0001098_12579_14063 478
6 3300046500 Ga0495596_0000228 Ga0495596_0000228_12679_14163 478
7 3300046522 Ga0495643_0036320 Ga0495643_0036320_1093_2577 478
8 3300046524 Ga0495648_0000304 Ga0495648_0000304_35797_37281 478
9 3300046538 Ga0495609_0000214 Ga0495609_0000214_46710_48194 478
10 3300047446 Ga0495679_000231 Ga0495679_000231_32829_34313 478
11 3300046506 Ga0495583_0001680 Ga0495583_0001680_10743_12206 487
12 3300048920 Ga0496117_0001861 Ga0496117_0001861_8872_10449 490
13 3300048921 Ga0496118_0002060 Ga0496118_0002060_18131_19708 490
14 3300048925 Ga0496122_0018123 Ga0496122_0018123_4037_5614 490
15 iso_pu_bacteria 2643221650 2644283968 490
16 3300013102 Ga0157371_10000131 Ga0157371_1000013165 491
17 3300042138 Ga0450903_005754 Ga0450903_005754_48_1523 491
18 3300046458 Ga0495591_000369 Ga0495591_000369_19127_20611 491
19 3300046471 Ga0495650_0002152 Ga0495650_0002152_10947_12512 491
20 3300046471 Ga0495650_0004717 Ga0495650_0004717_2510_3994 491
21 3300046491 Ga0495584_0004310 Ga0495584_0004310_3083_4567 491
22 3300046501 Ga0495607_0004813 Ga0495607_0004813_5429_6913 491
23 3300046506 Ga0495583_0000124 Ga0495583_0000124_25217_26701 491
24 3300046507 Ga0495606_0000013 Ga0495606_0000013_92921_94405 491
25 3300046513 Ga0495616_0000472 Ga0495616_0000472_15488_16972 491
26 3300046513 Ga0495616_0024864 Ga0495616_0024864_1674_3149 491
27 3300046518 Ga0495631_0009122 Ga0495631_0009122_550_2034 491
28 3300046519 Ga0495632_0002363 Ga0495632_0002363_8206_9690 491
29 3300046520 Ga0495637_0000021 Ga0495637_0000021_56060_57544 491
30 3300046522 Ga0495643_0041238 Ga0495643_0041238_976_2460 491
31 3300046530 Ga0495654_0003625 Ga0495654_0003625_5158_6642 491
32 3300046542 Ga0495597_0009357 Ga0495597_0009357_3323_4798 491
33 3300046660 Ga0495625_0000242 Ga0495625_0000242_48265_49749 491
34 3300046665 Ga0495661_0000001 Ga0495661_0000001_98403_99887 491
35 3300046692 Ga0495671_0003134 Ga0495671_0003134_3320_4804 491
36 3300046692 Ga0495671_0007067 Ga0495671_0007067_2921_4405 491
37 3300046810 Ga0495660_0004133 Ga0495660_0004133_3701_5185 491
38 3300047446 Ga0495679_001629 Ga0495679_001629_5780_7264 491
39 3300047469 Ga0495673_0005465 Ga0495673_0005465_4144_5628 491
40 3300047470 Ga0495681_0000730 Ga0495681_0000730_13787_15271 491
41 3300048926 Ga0496123_0001784 Ga0496123_0001784_8843_10420 491
42 3300049459 Ga0495678_000919 Ga0495678_000919_7035_8519 491
43 3300005289 Ga0065704_10071340 Ga0065704_100713408 494
44 3300046665 Ga0495661_0013124 Ga0495661_0013124_4005_5489 494
45 3300013102 Ga0157371_10004444 Ga0157371_100044442 499
46 3300009036 Ga0105244_10005601 Ga0105244_100056017 501
47 3300009148 Ga0105243_10000736 Ga0105243_1000073629 501
48 3300011119 Ga0105246_10011534 Ga0105246_100115342 501
49 3300025728 Ga0207655_1000076 Ga0207655_1000076230 501
50 3300025735 Ga0207713_1035869 Ga0207713_10358692 501
51 3300025935 Ga0207709_10000565 Ga0207709_1000056529 501
52 3300046501 Ga0495607_0002877 Ga0495607_0002877_366_1943 502
53 3300031911 Ga0307412_10006645 Ga0307412_100066452 507
54 3300046458 Ga0495591_000018 Ga0495591_000018_47720_49300 507
55 3300046512 Ga0495610_0051580 Ga0495610_0051580_111_1691 507
56 3300046520 Ga0495637_0018366 Ga0495637_0018366_1237_2817 507
57 3300046542 Ga0495597_0000013 Ga0495597_0000013_37472_39052 507
58 3300047320 Ga0495672_0039122 Ga0495672_0039122_535_2115 507
59 iso_pu_bacteria 8056120720 8056123243 507
60 3300046524 Ga0495648_0002070 Ga0495648_0002070_12776_14302 508
61 3300048919 Ga0496116_0001300 Ga0496116_0001300_18058_19635 508
62 3300048927 Ga0496124_0000172 Ga0496124_0000172_5577_7160 509
63 3300041405 Ga0439438_001652 Ga0439438_001652_5685_7268 511
64 3300030733 Ga0314311_1184894 Ga0314311_11848943 512
65 3300031731 Ga0307405_10093849 Ga0307405_100938492 512
66 3300031901 Ga0307406_10030713 Ga0307406_100307133 512
67 3300031911 Ga0307412_10045954 Ga0307412_100459542 512
68 3300032005 Ga0307411_10049256 Ga0307411_100492562 512
69 3300046810 Ga0495660_0000444 Ga0495660_0000444_30461_32068 512
70 3300047446 Ga0495679_000107 Ga0495679_000107_47624_49165 512
71 iso_pu_bacteria 2554235231 2555246768 512
72 3300038705 Ga0237819_01332 Ga0237819_01332_45_1607 513
73 iso_pu_bacteria 8054929484 8054932641 513
74 3300046519 Ga0495632_0001116 Ga0495632_0001116_3480_5099 514
75 iso_pu_bacteria 2806310737 2807408551 514
76 iso_pu_bacteria 2806310745 2807456866 514
77 iso_pu_bacteria 3007803356 3007808386 514
78 iso_pu_bacteria 8052494512 8052497367 514
79 iso_pu_bacteria 8056137416 8056140094 514
80 3300013307 Ga0157372_10108053 Ga0157372_101080535 515
81 3300048922 Ga0496119_0000016 Ga0496119_0000016_130219_131799 515
82 iso_pu_bacteria 3007718800 3007723557 515
83 iso_pu_bacteria 8056115690 8056118860 515
84 iso_pu_bacteria 8056172158 8056173924 515
85 3300042137 Ga0450902_000761 Ga0450902_000761_101_1663 516
86 3300046452 Ga0495617_001949 Ga0495617_001949_2393_3946 516
87 3300046453 Ga0495627_000995 Ga0495627_000995_11670_13223 516
88 3300046453 Ga0495627_001105 Ga0495627_001105_8288_9856 516
89 3300046458 Ga0495591_003598 Ga0495591_003598_3273_4826 516
90 3300046492 Ga0495585_0004264 Ga0495585_0004264_3466_5019 516
91 3300046518 Ga0495631_0002833 Ga0495631_0002833_307_1875 516
92 3300046519 Ga0495632_0006809 Ga0495632_0006809_4792_6360 516
93 3300046519 Ga0495632_0009773 Ga0495632_0009773_220_1788 516
94 3300046520 Ga0495637_0002257 Ga0495637_0002257_1221_2774 516
95 3300046523 Ga0495644_0000440 Ga0495644_0000440_12645_14198 516
96 3300046524 Ga0495648_0010039 Ga0495648_0010039_4984_6537 516
97 3300046530 Ga0495654_0001479 Ga0495654_0001479_6659_8227 516
98 3300046660 Ga0495625_0003706 Ga0495625_0003706_696_2249 516
99 3300046691 Ga0495670_0002830 Ga0495670_0002830_3710_5263 516
100 3300046692 Ga0495671_0001559 Ga0495671_0001559_1081_2634 516
101 3300046692 Ga0495671_0008833 Ga0495671_0008833_2069_3637 516
102 3300046794 Ga0495589_0001879 Ga0495589_0001879_2156_3709 516
103 3300047320 Ga0495672_0002947 Ga0495672_0002947_11224_12792 516
104 3300047320 Ga0495672_0002989 Ga0495672_0002989_2008_3561 516
105 3300047323 Ga0495683_0000893 Ga0495683_0000893_3673_5226 516
106 3300047470 Ga0495681_0000069 Ga0495681_0000069_804_2357 516
107 3300050514 nmdc:mga08x19_66842_c1 nmdc:mga08x19_66842_c1_724_2277 516
108 3300009011 Ga0105251_10028543 Ga0105251_100285433 517
109 3300009036 Ga0105244_10030157 Ga0105244_100301572 517
110 3300046474 Ga0495605_0000801 Ga0495605_0000801_5592_7187 517
111 3300046501 Ga0495607_0000333 Ga0495607_0000333_39311_40924 517
112 3300048925 Ga0496122_0023561 Ga0496122_0023561_1486_3051 517
113 3300048926 Ga0496123_0011187 Ga0496123_0011187_5521_7086 517
114 iso_pu_bacteria 2511231156 2511825781 517
115 iso_pu_bacteria 2599185188 2599500619 517
116 iso_pu_bacteria 2599185212 2599611998 517
117 iso_pu_bacteria 2599185248 2599769073 517
118 iso_pu_bacteria 2599185289 2599888317 517
119 iso_pu_bacteria 2599185291 2599895955 517
120 iso_pu_bacteria 2599185300 2599932283 517
121 iso_pu_bacteria 2599185302 2599943557 517
122 iso_pu_bacteria 2599185304 2599954668 517
123 iso_pu_bacteria 2599185305 2599957839 517
124 iso_pu_bacteria 2599185306 2599966812 517
125 iso_pu_bacteria 2599185308 2599978092 517
126 iso_pu_bacteria 2599185309 2599985223 517
127 iso_pu_bacteria 2599185310 2599988526 517
128 iso_pu_bacteria 2599185311 2599992459 517
129 iso_pu_bacteria 2599185312 2600003231 517
130 iso_pu_bacteria 2599185313 2600004067 517
131 iso_pu_bacteria 2599185314 2600012182 517
132 iso_pu_bacteria 2599185315 2600015563 517
133 iso_pu_bacteria 2599185316 2600023255 517
134 iso_pu_bacteria 2599185317 2600030881 517
135 iso_pu_bacteria 2599185318 2600038297 517
136 iso_pu_bacteria 2599185319 2600044451 517
137 iso_pu_bacteria 2599185320 2600049786 517
138 iso_pu_bacteria 2599185321 2600050771 517
139 iso_pu_bacteria 2599185322 2600058850 517
140 iso_pu_bacteria 2599185323 2600067949 517
141 iso_pu_bacteria 2599185324 2600072702 517
142 iso_pu_bacteria 2599185325 2600077003 517
143 iso_pu_bacteria 2600254930 2600360685 517
144 iso_pu_bacteria 2651869719 2652543911 517
145 iso_pu_bacteria 2667528170 2671088647 517
146 iso_pu_bacteria 2667528176 2671125120 517
147 iso_pu_bacteria 2675903515 2678263683 517
148 iso_pu_bacteria 2744054620 2745010014 517
149 iso_pu_bacteria 2791355520 2794597152 517
150 iso_pu_bacteria 2808606361 2808856358 517
151 iso_pu_bacteria 2808606376 2808924622 517
152 iso_pu_bacteria 2808606378 2808936906 517
153 iso_pu_bacteria 2808606380 2808946796 517
154 iso_pu_bacteria 2808606383 2808964674 517
155 iso_pu_bacteria 2808606389 2809000456 517
156 iso_pu_bacteria 2825651385 2825651943 517
157 iso_pu_bacteria 2842832357 2842835173 517
158 iso_pu_bacteria 2842854478 2842858287 517
159 iso_pu_bacteria 2913036834 2913039478 517
160 iso_pu_bacteria 2919155634 2919156282 517
161 iso_pu_bacteria 2919385768 2919390080 517
162 iso_pu_bacteria 2919481497 2919485472 517
163 iso_pu_bacteria 2923586266 2923586333 517
164 iso_pu_bacteria 2929144301 2929147144 517
165 iso_pu_bacteria 2931369376 2931369515 517
166 iso_pu_bacteria 2988728565 2988729253 517
167 iso_pu_bacteria 3007866637 3007869042 517
168 iso_pu_bacteria 8056143049 8056146071 517
169 3300006944 Ga0099823_1000004 Ga0099823_100000457 518
170 3300009036 Ga0105244_10003547 Ga0105244_100035476 518
171 3300009148 Ga0105243_10007907 Ga0105243_100079078 518
172 3300025292 Ga0209676_1001160 Ga0209676_10011608 518
173 3300025711 Ga0207696_1000006 Ga0207696_100000655 518
174 3300025711 Ga0207696_1020702 Ga0207696_10207022 518
175 3300025728 Ga0207655_1000077 Ga0207655_100007749 518
176 3300025735 Ga0207713_1012355 Ga0207713_10123552 518
177 3300027296 Ga0209389_1000006 Ga0209389_100000696 518
178 3300046515 Ga0495620_0000006 Ga0495620_0000006_56387_57955 518
179 3300046519 Ga0495632_0000074 Ga0495632_0000074_54624_56192 518
180 3300046522 Ga0495643_0001075 Ga0495643_0001075_24600_26168 518
181 3300046524 Ga0495648_0000062 Ga0495648_0000062_140896_142455 518
182 3300046524 Ga0495648_0000126 Ga0495648_0000126_22784_24352 518
183 3300048917 Ga0496114_0010907 Ga0496114_0010907_3372_4940 518
184 3300048920 Ga0496117_0000272 Ga0496117_0000272_64730_66298 518
185 3300048920 Ga0496117_0001081 Ga0496117_0001081_18454_20022 518
186 3300048920 Ga0496117_0006005 Ga0496117_0006005_1761_3329 518
187 3300048921 Ga0496118_0000891 Ga0496118_0000891_26986_28554 518
188 3300048922 Ga0496119_0018887 Ga0496119_0018887_2924_4492 518
189 3300048925 Ga0496122_0000388 Ga0496122_0000388_56002_57570 518
190 3300048926 Ga0496123_0000551 Ga0496123_0000551_44197_45765 518
191 3300048927 Ga0496124_0007546 Ga0496124_0007546_4644_6212 518
192 3300048927 Ga0496124_0012330 Ga0496124_0012330_6798_8366 518
193 3300048927 Ga0496124_0031032 Ga0496124_0031032_515_2083 518
194 3300048928 Ga0496125_0000038 Ga0496125_0000038_261281_262849 518
195 3300048929 Ga0496126_0018295 Ga0496126_0018295_1681_3249 518
196 3300049571 Ga0501034_0000055 Ga0501034_0000055_131133_132701 518
197 3300053135 Ga0500659_0000569 Ga0500659_0000569_19990_21558 518
198 iso_pu_bacteria 2718217725 2718633895 520
199 iso_pu_bacteria 2912963787 2912966955 520
200 3300003791 Ga0055530_10000010 Ga0055530_10000010122 521
201 3300003792 Ga0055540_1000032 Ga0055540_1000032122 521
202 3300005288 Ga0065714_10002248 Ga0065714_1000224839 521
203 3300006946 Ga0079104_1000128 Ga0079104_100012868 521
204 3300013102 Ga0157371_10010726 Ga0157371_100107262 521
205 3300013105 Ga0157369_10001559 Ga0157369_1000155919 521
206 3300014497 Ga0182008_10010863 Ga0182008_100108631 521
207 3300015261 Ga0182006_1012195 Ga0182006_10121952 521
208 3300015261 Ga0182006_1020861 Ga0182006_10208613 521
209 3300015261 Ga0182006_1042558 Ga0182006_10425581 521
210 3300015262 Ga0182007_10001645 Ga0182007_1000164510 521
211 3300025292 Ga0209676_1000020 Ga0209676_1000020291 521
212 3300025292 Ga0209676_1004087 Ga0209676_10040873 521
213 3300025298 Ga0209050_1000043 Ga0209050_100004329 521
214 3300025303 Ga0209051_1000030 Ga0209051_1000030320 521
215 3300025304 Ga0209257_1007316 Ga0209257_10073163 521
216 3300027111 Ga0209281_1000040 Ga0209281_1000040253 521
217 3300031548 Ga0307408_100021516 Ga0307408_1000215165 521
218 3300031548 Ga0307408_100027085 Ga0307408_1000270852 521
219 3300031548 Ga0307408_100093436 Ga0307408_1000934362 521
220 3300031731 Ga0307405_10017290 Ga0307405_100172903 521
221 3300031911 Ga0307412_10027363 Ga0307412_100273634 521
222 3300031911 Ga0307412_10057346 Ga0307412_100573463 521
223 3300032004 Ga0307414_10180982 Ga0307414_101809821 521
224 3300041405 Ga0439438_000077 Ga0439438_000077_705_2273 521
225 3300041405 Ga0439438_000113 Ga0439438_000113_30894_32513 521
226 3300041405 Ga0439438_000205 Ga0439438_000205_376_1944 521
227 3300041405 Ga0439438_000212 Ga0439438_000212_21350_22969 521
228 3300041405 Ga0439438_000478 Ga0439438_000478_427_2001 521
229 3300041405 Ga0439438_002096 Ga0439438_002096_2650_4218 521
230 3300041407 Ga0439447_004843 Ga0439447_004843_889_2457 521
231 3300041407 Ga0439447_010163 Ga0439447_010163_174_1748 521
232 3300041411 Ga0439466_0016061 Ga0439466_0016061_493_2061 521
233 3300041997 Ga0439431_0000286 Ga0439431_0000286_8498_10066 521
234 3300042004 Ga0439445_0000499 Ga0439445_0000499_6392_7966 521
235 3300042006 Ga0439432_001140 Ga0439432_001140_3703_5322 521
236 3300042006 Ga0439432_009618 Ga0439432_009618_1204_2823 521
237 3300042006 Ga0439432_017767 Ga0439432_017767_283_1857 521
238 3300042009 Ga0439451_003074 Ga0439451_003074_1648_3216 521
239 3300042010 Ga0439452_000107 Ga0439452_000107_54766_56385 521
240 3300042010 Ga0439452_004581 Ga0439452_004581_2881_4449 521
241 3300042010 Ga0439452_011617 Ga0439452_011617_295_1863 521
242 3300042013 Ga0439456_000373 Ga0439456_000373_2179_3798 521
243 3300042013 Ga0439456_003403 Ga0439456_003403_120_1688 521
244 3300042115 Ga0450911_000010 Ga0450911_000010_19733_21352 521
245 3300042145 Ga0450906_000007 Ga0450906_000007_26948_28567 521
246 3300042156 Ga0439446_0001547 Ga0439446_0001547_122_1696 521
247 3300048926 Ga0496123_0004082 Ga0496123_0004082_7071_8690 521
248 3300048928 Ga0496125_0000670 Ga0496125_0000670_7089_8708 521
249 iso_pu_bacteria 2511231021 2511358159 521
250 iso_pu_bacteria 2974289157 2974291413 521
251 iso_pu_bacteria 2998139840 2998142358 521
252 iso_pu_bacteria 3007872151 3007872199 521
253 iso_pu_bacteria 8029995093 8029998340 521
254 iso_pu_bacteria 8056166840 8056168718 521
255 3300009011 Ga0105251_10012364 Ga0105251_100123643 522
256 3300046530 Ga0495654_0003581 Ga0495654_0003581_4935_6509 522
257 3300047320 Ga0495672_0002130 Ga0495672_0002130_6158_7732 522
258 iso_pu_bacteria 2713897148 2715750732 522
259 iso_pu_bacteria 2842843487 2842846918 522
260 iso_pu_bacteria 2919487758 2919489418 522
261 iso_pu_bacteria 2939651529 2939655542 522
262 iso_pu_bacteria 2969304461 2969307040 523
263 3300046460 Ga0495638_0000125 Ga0495638_0000125_114814_116397 524
264 3300046491 Ga0495584_0043947 Ga0495584_0043947_496_2079 524
265 3300046501 Ga0495607_0000037 Ga0495607_0000037_5694_7271 524
266 3300046501 Ga0495607_0004049 Ga0495607_0004049_7136_8719 524
267 3300046513 Ga0495616_0018058 Ga0495616_0018058_2154_3737 524
268 3300046519 Ga0495632_0004470 Ga0495632_0004470_5946_7529 524
269 3300046523 Ga0495644_0000810 Ga0495644_0000810_1948_3531 524
270 3300046542 Ga0495597_0010390 Ga0495597_0010390_1768_3351 524
271 3300046648 Ga0495611_0005672 Ga0495611_0005672_1301_2884 524
272 3300046692 Ga0495671_0010402 Ga0495671_0010402_2541_4124 524
273 3300046694 Ga0495649_0000527 Ga0495649_0000527_8280_9863 524
274 3300046810 Ga0495660_0022471 Ga0495660_0022471_703_2286 524
275 3300047320 Ga0495672_0003553 Ga0495672_0003553_4250_5833 524
276 3300047323 Ga0495683_0002955 Ga0495683_0002955_33_1616 524
277 3300047469 Ga0495673_0002079 Ga0495673_0002079_3860_5443 524
278 3300048913 Ga0496110_0091751 Ga0496110_0091751_790_2373 524
279 3300048927 Ga0496124_0007445 Ga0496124_0007445_8352_9935 524
280 iso_pu_bacteria 2738541271 2738690870 524
281 iso_pu_bacteria 2738543016 2739266644 524
282 3300006058 Ga0075432_10000343 Ga0075432_100003439 525
283 3300009011 Ga0105251_10039038 Ga0105251_100390381 525
284 3300025735 Ga0207713_1000143 Ga0207713_100014353 525
285 3300042137 Ga0450902_001730 Ga0450902_001730_618_2198 525
286 3300046452 Ga0495617_003838 Ga0495617_003838_3395_4975 525
287 3300046457 Ga0495590_0007721 Ga0495590_0007721_570_2150 525
288 3300046458 Ga0495591_000008 Ga0495591_000008_230972_232552 525
289 3300046460 Ga0495638_0000527 Ga0495638_0000527_8348_9928 525
290 3300046471 Ga0495650_0000592 Ga0495650_0000592_20856_22445 525
291 3300046471 Ga0495650_0008682 Ga0495650_0008682_570_2150 525
292 3300046474 Ga0495605_0017579 Ga0495605_0017579_1455_3035 525
293 3300046491 Ga0495584_0017000 Ga0495584_0017000_2077_3657 525
294 3300046500 Ga0495596_0000005 Ga0495596_0000005_141809_143389 525
295 3300046501 Ga0495607_0000579 Ga0495607_0000579_8816_10396 525
296 3300046501 Ga0495607_0014336 Ga0495607_0014336_1162_2742 525
297 3300046506 Ga0495583_0000356 Ga0495583_0000356_3398_4987 525
298 3300046507 Ga0495606_0028051 Ga0495606_0028051_1682_3262 525
299 3300046512 Ga0495610_0014478 Ga0495610_0014478_1288_2877 525
300 3300046515 Ga0495620_0002527 Ga0495620_0002527_5208_6788 525
301 3300046518 Ga0495631_0024350 Ga0495631_0024350_371_1951 525
302 3300046519 Ga0495632_0000037 Ga0495632_0000037_38126_39715 525
303 3300046519 Ga0495632_0000998 Ga0495632_0000998_20281_21861 525
304 3300046519 Ga0495632_0001859 Ga0495632_0001859_12872_14452 525
305 3300046520 Ga0495637_0000086 Ga0495637_0000086_20924_22504 525
306 3300046520 Ga0495637_0004468 Ga0495637_0004468_3104_4693 525
307 3300046522 Ga0495643_0004478 Ga0495643_0004478_3015_4595 525
308 3300046530 Ga0495654_0003025 Ga0495654_0003025_3974_5554 525
309 3300046542 Ga0495597_0000631 Ga0495597_0000631_12055_13635 525
310 3300046542 Ga0495597_0017275 Ga0495597_0017275_760_2340 525
311 3300046616 Ga0495668_0000393 Ga0495668_0000393_35939_37519 525
312 3300046665 Ga0495661_0000057 Ga0495661_0000057_12133_13722 525
313 3300046665 Ga0495661_0020736 Ga0495661_0020736_1077_2657 525
314 3300046694 Ga0495649_0000027 Ga0495649_0000027_149091_150680 525
315 3300046694 Ga0495649_0026114 Ga0495649_0026114_1068_2648 525
316 3300046794 Ga0495589_0004055 Ga0495589_0004055_3395_4975 525
317 3300047320 Ga0495672_0012793 Ga0495672_0012793_2427_4007 525
318 3300047323 Ga0495683_0002347 Ga0495683_0002347_9199_10779 525
319 3300047469 Ga0495673_0038006 Ga0495673_0038006_44_1624 525
320 3300047470 Ga0495681_0000151 Ga0495681_0000151_51938_53518 525
321 3300047470 Ga0495681_0000995 Ga0495681_0000995_1343_2923 525
322 3300047472 Ga0495686_0012022 Ga0495686_0012022_4197_5777 525
323 3300048091 Ga0495626_0000040 Ga0495626_0000040_28917_30497 525
324 3300049459 Ga0495678_000580 Ga0495678_000580_25173_26753 525
325 3300009092 Ga0105250_10001933 Ga0105250_100019338 526
326 3300012498 Ga0157345_1000004 Ga0157345_100000422 526
327 3300013105 Ga0157369_10000286 Ga0157369_1000028628 526
328 3300015261 Ga0182006_1000325 Ga0182006_100032516 526
329 3300025711 Ga0207696_1001877 Ga0207696_10018772 526
330 3300032002 Ga0307416_100058828 Ga0307416_1000588284 526
331 3300032004 Ga0307414_10048967 Ga0307414_100489674 526
332 3300042013 Ga0439456_000024 Ga0439456_000024_46550_48133 526
333 3300046453 Ga0495627_000429 Ga0495627_000429_2736_4322 526
334 3300046458 Ga0495591_000120 Ga0495591_000120_61767_63359 526
335 3300046471 Ga0495650_0009781 Ga0495650_0009781_65_1651 526
336 3300046491 Ga0495584_0044634 Ga0495584_0044634_379_1971 526
337 3300046500 Ga0495596_0037800 Ga0495596_0037800_192_1778 526
338 3300046501 Ga0495607_0033794 Ga0495607_0033794_124_1716 526
339 3300046506 Ga0495583_0001633 Ga0495583_0001633_3200_4804 526
340 3300046507 Ga0495606_0000634 Ga0495606_0000634_48994_50586 526
341 3300046507 Ga0495606_0010010 Ga0495606_0010010_4664_6256 526
342 3300046512 Ga0495610_0018161 Ga0495610_0018161_2271_3863 526
343 3300046513 Ga0495616_0000166 Ga0495616_0000166_19075_20661 526
344 3300046515 Ga0495620_0000127 Ga0495620_0000127_58448_60040 526
345 3300046518 Ga0495631_0000013 Ga0495631_0000013_57171_58757 526
346 3300046519 Ga0495632_0005353 Ga0495632_0005353_1640_3232 526
347 3300046520 Ga0495637_0001392 Ga0495637_0001392_11387_12973 526
348 3300046542 Ga0495597_0000117 Ga0495597_0000117_68718_70304 526
349 3300046557 Ga0495622_0000047 Ga0495622_0000047_57004_58590 526
350 3300046558 Ga0495633_0000564 Ga0495633_0000564_2591_4177 526
351 3300046794 Ga0495589_0000167 Ga0495589_0000167_44786_46378 526
352 3300046810 Ga0495660_0002399 Ga0495660_0002399_2501_4087 526
353 3300047320 Ga0495672_0003616 Ga0495672_0003616_7886_9472 526
354 3300047469 Ga0495673_0005992 Ga0495673_0005992_1626_3212 526
355 3300047470 Ga0495681_0002512 Ga0495681_0002512_11433_13019 526
356 3300048091 Ga0495626_0000366 Ga0495626_0000366_44686_46278 526
357 3300048091 Ga0495626_0003683 Ga0495626_0003683_714_2306 526
358 3300049459 Ga0495678_000222 Ga0495678_000222_4461_6053 526
359 3300049460 Ga0495682_0000085 Ga0495682_0000085_26869_28455 526
360 3300053111 Ga0500572_004662 Ga0500572_004662_500_2086 526
361 iso_pu_bacteria 2600255283 2601623697 526
362 iso_pu_bacteria 3007861166 3007861728 526
363 3300046692 Ga0495671_0012787 Ga0495671_0012787_2725_4320 527
364 3300046692 Ga0495671_0016917 Ga0495671_0016917_826_2421 527
365 3300047321 Ga0495676_0003901 Ga0495676_0003901_9328_10923 527
366 3300046458 Ga0495591_019163 Ga0495591_019163_535_2124 528
367 3300046492 Ga0495585_0000117 Ga0495585_0000117_41072_42661 528
368 3300046506 Ga0495583_0011954 Ga0495583_0011954_901_2490 528
369 3300046518 Ga0495631_0006278 Ga0495631_0006278_1929_3518 528
370 3300046522 Ga0495643_0005274 Ga0495643_0005274_3787_5376 528
371 3300046665 Ga0495661_0061477 Ga0495661_0061477_137_1726 528
372 3300046692 Ga0495671_0005534 Ga0495671_0005534_3964_5553 528
373 3300046810 Ga0495660_0005198 Ga0495660_0005198_2537_4126 528
374 3300047320 Ga0495672_0015048 Ga0495672_0015048_735_2324 528
375 3300047469 Ga0495673_0000197 Ga0495673_0000197_82503_84092 528
376 3300049459 Ga0495678_000494 Ga0495678_000494_2536_4125 528
377 iso_pu_bacteria 2511231010 2511291957 529
378 iso_pu_bacteria 2600255318 2601799302 529
379 iso_pu_bacteria 2603880185 2606078467 529
380 iso_pu_bacteria 2603880199 2606130575 529
381 iso_pu_bacteria 2623620443 2624480288 529
382 iso_pu_bacteria 2713897149 2715758615 529
383 iso_pu_bacteria 2878029506 2878032189 529
384 iso_pu_bacteria 2919063839 2919068704 529
385 3300046463 Ga0495653_0001124 Ga0495653_0001124_5757_7376 530
386 3300046492 Ga0495585_0000072 Ga0495585_0000072_17189_18787 530
387 3300046507 Ga0495606_0000081 Ga0495606_0000081_134993_136591 530
388 3300046665 Ga0495661_0000010 Ga0495661_0000010_127522_129120 530
389 3300047323 Ga0495683_0000006 Ga0495683_0000006_204419_206017 530
390 3300046501 Ga0495607_0000844 Ga0495607_0000844_24016_25626 531
391 3300046501 Ga0495607_0000847 Ga0495607_0000847_23342_24949 531
392 3300003781 Ga0055536_1000013 Ga0055536_100001326 533
393 3300003791 Ga0055530_10000212 Ga0055530_1000021215 533
394 3300003792 Ga0055540_1000008 Ga0055540_100000874 533
395 3300003794 Ga0055531_10000150 Ga0055531_1000015033 533
396 3300005288 Ga0065714_10080759 Ga0065714_100807592 533
397 3300009011 Ga0105251_10009438 Ga0105251_100094386 533
398 3300009011 Ga0105251_10025860 Ga0105251_100258603 533
399 3300009036 Ga0105244_10010317 Ga0105244_100103172 533
400 3300013100 Ga0157373_10022372 Ga0157373_100223722 533
401 3300015261 Ga0182006_1027537 Ga0182006_10275372 533
402 3300025291 Ga0209675_1006627 Ga0209675_10066273 533
403 3300025292 Ga0209676_1000002 Ga0209676_10000021497 533
404 3300025298 Ga0209050_1000006 Ga0209050_100000674 533
405 3300025303 Ga0209051_1000001 Ga0209051_10000011497 533
406 3300025304 Ga0209257_1000029 Ga0209257_100002974 533
407 3300025711 Ga0207696_1000844 Ga0207696_100084415 533
408 3300025728 Ga0207655_1011707 Ga0207655_10117075 533
409 3300025735 Ga0207713_1000131 Ga0207713_100013142 533
410 3300025735 Ga0207713_1020409 Ga0207713_10204092 533

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22588

dCache_1_like

Histidine kinase sensor domain

269

357

0.97

PF00990

GGDEF

Diguanylate cyclase, GGDEF domain

417

578

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i5b-assembly2.cif.gz_B crystal structure of the isolated ggdef domain of wpsr from pseudomonas aeruginosa 0.9638 353 515
5euh-assembly4.cif.gz_D crystal structure of the c-di-gmp-bound ggdef domain of p. fluorescens gcbc 0.9295 353 516
3i5b-assembly2.cif.gz_B crystal structure of the isolated ggdef domain of wpsr from pseudomonas aeruginosa 0.9249 353 515
5euh-assembly2.cif.gz_B crystal structure of the c-di-gmp-bound ggdef domain of p. fluorescens gcbc 0.9211 353 516
6tts-assembly1.cif.gz_B crystal structure of the ggdef domain of dgcb from caulobacter crescentus in complex with c-di-gmp 0.918 351 516
ID Description Score Start End Superfamily
3i5cB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9745 353 515 3.30.70.270
3i5cB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9404 353 515 3.30.70.270
3lifB02 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;PAS domain 0.9343 204 294 3.30.450.20
5euhD00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9295 353 516 3.30.70.270
5euhB00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9211 353 516 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A644YVT0-F1-model_v4 Phytochrome-like protein cph2 0.9673 388 515 GO:0005886
GO:0043709
GO:0052621
GO:1902201
AF-A0A2G1ASS2-F1-model_v4 deleted 0.9561 326 513
AF-A0A5Q2Q9C5-F1-model_v4 Diguanylate cyclase 0.9536 349 515
AF-A0A0W0MUM7-F1-model_v4 deleted 0.9507 276 515
AF-A0A8B6KT49-F1-model_v4 deleted 0.9457 339 516

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pLDDT pTM Quality
82.92 0.53 Medium
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Predicted Structure (AlphaFold2)

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