F436243

General Info

Members Datasets Scaffolds Average Seq Length
406 217 740 280

Family's Representative Sequence

Representative Sequence 3300028794|Ga0307515_10174770|Ga0307515_101747702
Length 308
Sequence VDPEHVAVNGRKRSQQPQRSHREVADELRTRIRSGELRPGQRMPTQAQLADEFGVERGAVRQALRILQSEHLLSNVSKGSPATVAQDVGPALTGPGAPPQPTMVALASRITAAFSAPHVEIDALCLTAVSLTLAMGEPLRLIHEGRIEPARIDVRVLLPSSDIDLAFPAPVDDKVDDRLQRRWLAHRNAQGQVLKHNLLALRATHGIDVRITFRALPFTPPVKLYLLNGVEALFAYYTLTRRGEEIDHEYLEMYDAEGTQSMLFPFEQGDGLRDTTFVEQSHLWFNALWETISSELVLTGRGLPQMGT

Samples

Sample ID Description Type Environment
1 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
9 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
11 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
12 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
13 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
14 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
15 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
16 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
17 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
18 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
19 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
20 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
21 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
22 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
23 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
24 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
31 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
32 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
33 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
34 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
35 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
36 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
37 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
38 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
39 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
40 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
41 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
42 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
43 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
44 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
45 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
46 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
47 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
48 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
49 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
50 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
51 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
52 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
53 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
54 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
55 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
56 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
57 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
58 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
65 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
66 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
67 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
68 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
71 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
74 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
75 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
76 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
79 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
80 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
81 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
82 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
83 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
84 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
85 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
86 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
87 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
88 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
89 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
90 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
91 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
92 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
98 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
99 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
100 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
101 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
102 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
103 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
104 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
107 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
110 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
111 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
112 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
119 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
120 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
121 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
122 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
128 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
129 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
130 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
131 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
132 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
140 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
141 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
146 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
171 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
172 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
173 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
174 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
175 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
176 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
177 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
178 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
179 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
180 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
181 2643221647 Streptomyces sp. Root369 Isolate Unclassified
182 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
183 2643221714 Streptomyces sp. Root264 Isolate Unclassified
184 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
185 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
186 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
187 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
188 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
189 2808606448 Streptomyces sp. 193411 Isolate Unclassified
190 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
191 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
192 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
193 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
194 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
195 2862574272 Streptomyces sp. AcE210 Isolate Nodule
196 2867428634 Streptomyces sp. RP5T Isolate Unclassified
197 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
198 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
199 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
200 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
201 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
202 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
203 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
204 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
205 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
206 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
207 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
208 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
209 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
210 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
211 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
212 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
213 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
214 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
215 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
216 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
217 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.68
Metatranscriptomes 0.49
Isolates 11.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.22
Nodule 0.25
Rhizoplane 0.74
Rhizosphere 83
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307515_10174770 3300028794 Bacteria 2123
2 rootH1_10044143 3300003316 Bacteria 8087
3 rootH2_10026737 3300003320 Bacteria 2389
4 rootH2_10026961 3300003320 Bacteria 5539
5 rootL2_10008484 3300003322 Bacteria 3532
6 rootL2_10018280 3300003322 Bacteria 5467
7 Ga0006562J51391_1047657 3300003578 Bacteria 4310
8 Ga0006562J51391_1131943 3300003578 Bacteria 5960
9 Ga0068867_100366016 3300005459 Bacteria 1207
10 Ga0068853_100174753 3300005539 Bacteria 1945
11 Ga0068854_100125473 3300005578 Bacteria 1954
12 Ga0081539_10172577 3300005985 Bacteria 1021
13 Ga0075363_100011686 3300006048 Bacteria 4212
14 Ga0105251_10027088 3300009011 Bacteria 2910
15 Ga0105250_10031897 3300009092 Bacteria 2116
16 Ga0105245_10124971 3300009098 Bacteria 2407
17 Ga0105245_10315199 3300009098 Bacteria 1539
18 Ga0105243_10047041 3300009148 Bacteria 3395
19 Ga0105248_10035515 3300009177 Bacteria 5576
20 Ga0105238_10183527 3300009551 Bacteria 2069
21 Ga0105246_10001065 3300011119 Bacteria 15846
22 Ga0105246_10399566 3300011119 Bacteria 1141
23 Ga0157375_10625140 3300013308 Bacteria 1235
24 Ga0182008_10005008 3300014497 Bacteria 7624
25 Ga0182006_1012270 3300015261 Bacteria 3748
26 Ga0182007_10003140 3300015262 Bacteria 7939
27 Ga0183367_1005 3300015688 Bacteria 652063
28 Ga0209758_1002545 3300025297 Bacteria 18384
29 Ga0207713_1091210 3300025735 Bacteria 1070
30 Ga0207694_10139661 3300025924 Bacteria 1948
31 Ga0207687_10153967 3300025927 Bacteria 1757
32 Ga0207709_10030479 3300025935 Bacteria 3138
33 Ga0207639_10126591 3300026041 Bacteria 2108
34 Ga0209371_1010774 3300027312 Bacteria 2775
35 Ga0307517_10004653 3300028786 Bacteria 21038
36 Ga0307515_10001466 3300028794 Bacteria 53016
37 Ga0307515_10289050 3300028794 Bacteria 1337
38 Ga0268256_1011607 3300030500 Bacteria 2775
39 Ga0307511_10003532 3300030521 Bacteria 16057
40 Ga0307511_10060832 3300030521 Bacteria 2885
41 Ga0307512_10003998 3300030522 Bacteria 16470
42 Ga0307513_10007043 3300031456 Bacteria 14627
43 Ga0307513_10013728 3300031456 Bacteria 9931
44 Ga0307513_10076695 3300031456 Bacteria 3465
45 Ga0307513_10219219 3300031456 Bacteria 1725
46 Ga0307509_10008949 3300031507 Bacteria 12623
47 Ga0307509_10010098 3300031507 Bacteria 11638
48 Ga0307508_10006721 3300031616 Bacteria 10787
49 Ga0307508_10026544 3300031616 Bacteria 5250
50 Ga0307508_10052786 3300031616 Bacteria 3609
51 Ga0307514_10007468 3300031649 Bacteria 9419
52 Ga0307514_10114722 3300031649 Bacteria 1898
53 Ga0307516_10004356 3300031730 Bacteria 17506
54 Ga0307518_10082783 3300031838 Bacteria 2315
55 Ga0307518_10106116 3300031838 Bacteria 2006
56 Ga0307507_10061249 3300033179 Bacteria 3505
57 Ga0307507_10066709 3300033179 Bacteria 3296
58 Ga0307510_10002698 3300033180 Bacteria 20297
59 Ga0307510_10017502 3300033180 Bacteria 8448
60 Ga0307510_10025861 3300033180 Bacteria 6763
61 Ga0395900_0076853 3300037418 Bacteria 3431
62 Ga0395898_0001874 3300037466 Bacteria 26874
63 Ga0395898_0004814 3300037466 Bacteria 14688
64 Ga0395898_0141510 3300037466 Bacteria 2303
65 Ga0395898_0163126 3300037466 Bacteria 2132
66 Ga0395905_0237846 3300037471 Bacteria 1702
67 Ga0395901_0159855 3300038443 Bacteria 2366
68 Ga0439436_0000339 3300041404 Bacteria 11549
69 Ga0451800_1463654 3300041459 Bacteria 1491
70 Ga0451837_0275838 3300041494 Bacteria 8461
71 Ga0451849_0826688 3300041505 Bacteria 1066
72 Ga0439433_0043862 3300041999 Bacteria 1045
73 Ga0439448_0001490 3300042005 Bacteria 6094
74 Ga0439449_0026792 3300042007 Bacteria 2151
75 Ga0439457_003081 3300042014 Bacteria 4611
76 Ga0439462_0007706 3300042015 Bacteria 2701
77 Ga0450903_000424 3300042138 Bacteria 9055
78 Ga0439458_0000659 3300042157 Bacteria 8897
79 Ga0439458_0016755 3300042157 Bacteria 1668
80 Ga0450901_008654 3300042533 Bacteria 1050
81 Ga0466969_0031582 3300044656 Bacteria 2695
82 Ga0466969_0113346 3300044656 Bacteria 1267
83 Ga0466972_0023862 3300044658 Bacteria 3039
84 Ga0466972_0035757 3300044658 Bacteria 2431
85 Ga0466972_0078023 3300044658 Bacteria 1577
86 Ga0466965_0000260 3300044683 Bacteria 17181
87 Ga0466965_0019899 3300044683 Bacteria 3223
88 Ga0466965_0062494 3300044683 Bacteria 1863
89 Ga0466966_0001936 3300044684 Bacteria 13410
90 Ga0466966_0007199 3300044684 Bacteria 7373
91 Ga0466961_0001003 3300044693 Bacteria 17422
92 Ga0466961_0004610 3300044693 Bacteria 8652
93 Ga0466961_0030817 3300044693 Bacteria 3446
94 Ga0466961_0080121 3300044693 Bacteria 2067
95 Ga0466963_0000260 3300044694 Bacteria 23211
96 Ga0466964_0000312 3300044706 Bacteria 14359
97 Ga0466971_0010947 3300044719 Bacteria 3968
98 Ga0466971_0036508 3300044719 Bacteria 2204
99 Ga0466971_0073570 3300044719 Bacteria 1553
100 Ga0466968_0002551 3300044735 Bacteria 6694
101 Ga0466970_0000472 3300044765 Bacteria 19918
102 Ga0466970_0005913 3300044765 Bacteria 6096
103 Ga0466957_0002000 3300044842 Bacteria 10853
104 Ga0466960_0004008 3300044901 Bacteria 5726
105 Ga0466959_0002699 3300045049 Bacteria 11398
106 Ga0466959_0127744 3300045049 Bacteria 1803
107 Ga0466958_0001045 3300045836 Bacteria 12669
108 Ga0466967_0000141 3300045976 Bacteria 27898
109 Ga0466967_0024357 3300045976 Bacteria 4975
110 Ga0495617_014911 3300046452 Bacteria 2638
111 Ga0495592_0006039 3300046454 Bacteria 9004
112 Ga0495592_0071697 3300046454 Bacteria 2521
113 Ga0495603_0012192 3300046455 Bacteria 5205
114 Ga0495603_0105140 3300046455 Bacteria 1647
115 Ga0495590_0035536 3300046457 Bacteria 1739
116 Ga0495590_0051270 3300046457 Bacteria 1441
117 Ga0495629_0010132 3300046459 Bacteria 6873
118 Ga0495629_0028870 3300046459 Bacteria 3938
119 Ga0495629_0055723 3300046459 Bacteria 2764
120 Ga0495629_0140659 3300046459 Bacteria 1679
121 Ga0495629_0204581 3300046459 Bacteria 1364
122 Ga0495629_0220757 3300046459 Bacteria 1307
123 Ga0495638_0051871 3300046460 Bacteria 2557
124 Ga0495638_0166318 3300046460 Bacteria 1268
125 Ga0495638_0289250 3300046460 Bacteria 887
126 Ga0495641_0040444 3300046461 Bacteria 2168
127 Ga0495651_0164999 3300046462 Bacteria 1583
128 Ga0495582_0024970 3300046473 Bacteria 3273
129 Ga0495605_0006244 3300046474 Bacteria 6869
130 Ga0495662_0000568 3300046476 Bacteria 16984
131 Ga0495662_0001073 3300046476 Bacteria 13436
132 Ga0495662_0002523 3300046476 Bacteria 9229
133 Ga0495664_0091115 3300046477 Bacteria 1833
134 Ga0495664_0110032 3300046477 Bacteria 1662
135 Ga0495585_0038059 3300046492 Bacteria 2708
136 Ga0495585_0040869 3300046492 Bacteria 2602
137 Ga0495594_0003449 3300046499 Bacteria 8163
138 Ga0495594_0095645 3300046499 Bacteria 1668
139 Ga0495594_0214161 3300046499 Bacteria 1098
140 Ga0495596_0025964 3300046500 Bacteria 2363
141 Ga0495607_0059251 3300046501 Bacteria 2184
142 Ga0495583_0007917 3300046506 Bacteria 6586
143 Ga0495606_0043932 3300046507 Bacteria 2975
144 Ga0495606_0076270 3300046507 Bacteria 2095
145 Ga0495606_0216033 3300046507 Bacteria 1083
146 Ga0495610_0158132 3300046512 Bacteria 960
147 Ga0495616_0017617 3300046513 Bacteria 3936
148 Ga0495618_0019356 3300046514 Bacteria 4187
149 Ga0495618_0093670 3300046514 Bacteria 1921
150 Ga0495620_0008620 3300046515 Bacteria 5467
151 Ga0495620_0013625 3300046515 Bacteria 4157
152 Ga0495628_0142527 3300046516 Bacteria 1828
153 Ga0495630_0103187 3300046517 Bacteria 2158
154 Ga0495631_0002495 3300046518 Bacteria 10356
155 Ga0495632_0057055 3300046519 Bacteria 1907
156 Ga0495637_0066102 3300046520 Bacteria 1470
157 Ga0495643_0003384 3300046522 Bacteria 11732
158 Ga0495643_0178663 3300046522 Bacteria 1033
159 Ga0495644_0089105 3300046523 Bacteria 1164
160 Ga0495648_0005168 3300046524 Bacteria 10920
161 Ga0495648_0043733 3300046524 Bacteria 2804
162 Ga0495666_0013430 3300046526 Bacteria 4084
163 Ga0495642_0124425 3300046528 Bacteria 1107
164 Ga0495652_0027118 3300046529 Bacteria 5050
165 Ga0495640_0008372 3300046533 Bacteria 8114
166 Ga0495640_0053999 3300046533 Bacteria 2754
167 Ga0495586_0173696 3300046535 Bacteria 1218
168 Ga0495586_0190444 3300046535 Bacteria 1162
169 Ga0495587_0347928 3300046536 Bacteria 826
170 Ga0495609_0018384 3300046538 Bacteria 3238
171 Ga0495597_0004150 3300046542 Bacteria 8040
172 Ga0495597_0013593 3300046542 Bacteria 3894
173 Ga0495597_0067980 3300046542 Bacteria 1540
174 Ga0495645_0206686 3300046543 Bacteria 1328
175 Ga0495633_0040300 3300046558 Bacteria 2226
176 Ga0495633_0046080 3300046558 Bacteria 2063
177 Ga0495633_0092373 3300046558 Bacteria 1406
178 Ga0495668_0011870 3300046616 Bacteria 5191
179 Ga0495668_0023301 3300046616 Bacteria 3533
180 Ga0495668_0211827 3300046616 Bacteria 1061
181 Ga0495634_0004986 3300046642 Bacteria 10256
182 Ga0495611_0009840 3300046648 Bacteria 4044
183 Ga0495611_0096427 3300046648 Bacteria 1369
184 Ga0495611_0128636 3300046648 Bacteria 1181
185 Ga0495625_0006786 3300046660 Bacteria 10119
186 Ga0495625_0016179 3300046660 Bacteria 5875
187 Ga0495625_0031162 3300046660 Bacteria 3969
188 Ga0495625_0040699 3300046660 Bacteria 3386
189 Ga0495625_0167506 3300046660 Bacteria 1468
190 Ga0495625_0194813 3300046660 Bacteria 1340
191 Ga0495635_0044718 3300046663 Bacteria 3054
192 Ga0495635_0090795 3300046663 Bacteria 2089
193 Ga0495661_0098477 3300046665 Bacteria 1650
194 Ga0495588_0007630 3300046674 Bacteria 4937
195 Ga0495588_0037306 3300046674 Bacteria 2468
196 Ga0495588_0070334 3300046674 Bacteria 1819
197 Ga0495588_0097725 3300046674 Bacteria 1541
198 Ga0495657_0000588 3300046675 Bacteria 33293
199 Ga0495657_0001948 3300046675 Bacteria 17618
200 Ga0495657_0002259 3300046675 Bacteria 16275
201 Ga0495657_0026258 3300046675 Bacteria 4124
202 Ga0495623_0037551 3300046679 Bacteria 3099
203 Ga0495646_0085175 3300046680 Bacteria 1834
204 Ga0495646_0118714 3300046680 Bacteria 1498
205 Ga0495613_0004048 3300046689 Bacteria 10964
206 Ga0495613_0010586 3300046689 Bacteria 6840
207 Ga0495613_0014565 3300046689 Bacteria 5832
208 Ga0495613_0050946 3300046689 Bacteria 3053
209 Ga0495613_0286566 3300046689 Bacteria 1142
210 Ga0495670_0030880 3300046691 Bacteria 2662
211 Ga0495670_0070778 3300046691 Bacteria 1765
212 Ga0495671_0026960 3300046692 Bacteria 2972
213 Ga0495671_0046299 3300046692 Bacteria 2174
214 Ga0495671_0083622 3300046692 Bacteria 1564
215 Ga0495671_0108453 3300046692 Bacteria 1356
216 Ga0495671_0116693 3300046692 Bacteria 1303
217 Ga0495649_0010506 3300046694 Bacteria 5458
218 Ga0495649_0012549 3300046694 Bacteria 4921
219 Ga0495649_0072523 3300046694 Bacteria 1845
220 Ga0495649_0139804 3300046694 Bacteria 1275
221 Ga0495589_0005684 3300046794 Bacteria 6575
222 Ga0495589_0062786 3300046794 Bacteria 1822
223 Ga0495589_0083118 3300046794 Bacteria 1556
224 Ga0495589_0139535 3300046794 Bacteria 1161
225 Ga0495600_0017809 3300046809 Bacteria 4521
226 Ga0495600_0040638 3300046809 Bacteria 3030
227 Ga0495600_0195454 3300046809 Bacteria 1300
228 Ga0495660_0004298 3300046810 Bacteria 8637
229 Ga0495660_0100098 3300046810 Bacteria 1493
230 Ga0495660_0161456 3300046810 Bacteria 1098
231 Ga0495581_0014794 3300047315 Bacteria 4527
232 Ga0495581_0173162 3300047315 Bacteria 1262
233 Ga0495581_0190287 3300047315 Bacteria 1200
234 Ga0495604_0000281 3300047317 Bacteria 45474
235 Ga0495604_0039066 3300047317 Bacteria 3731
236 Ga0495636_0002432 3300047318 Bacteria 7137
237 Ga0495636_0011805 3300047318 Bacteria 3460
238 Ga0495636_0015067 3300047318 Bacteria 3079
239 Ga0495636_0034123 3300047318 Bacteria 2093
240 Ga0495674_0123012 3300047319 Bacteria 2191
241 Ga0495672_0043835 3300047320 Bacteria 2687
242 Ga0495672_0182263 3300047320 Bacteria 1062
243 Ga0495676_0006699 3300047321 Bacteria 10607
244 Ga0495676_0013135 3300047321 Bacteria 7448
245 Ga0495676_0157225 3300047321 Bacteria 1611
246 Ga0495676_0238138 3300047321 Bacteria 1247
247 Ga0495676_0251765 3300047321 Bacteria 1204
248 Ga0495680_0004961 3300047322 Bacteria 12584
249 Ga0495683_0101138 3300047323 Bacteria 1385
250 Ga0495687_003738 3300047443 Bacteria 10774
251 Ga0495687_011541 3300047443 Bacteria 4741
252 Ga0495687_022758 3300047443 Bacteria 3004
253 Ga0495675_0031724 3300047444 Bacteria 3373
254 Ga0495675_0187726 3300047444 Bacteria 1263
255 Ga0495677_0040758 3300047445 Bacteria 1698
256 Ga0495685_003879 3300047447 Bacteria 4797
257 Ga0495685_003940 3300047447 Bacteria 4768
258 Ga0495685_010943 3300047447 Bacteria 3051
259 Ga0495685_020957 3300047447 Bacteria 2247
260 Ga0495685_035677 3300047447 Bacteria 1708
261 Ga0495685_040206 3300047447 Bacteria 1599
262 Ga0495681_0000726 3300047470 Bacteria 25285
263 Ga0495681_0056731 3300047470 Bacteria 1821
264 Ga0495686_0010070 3300047472 Bacteria 6752
265 Ga0495686_0045343 3300047472 Bacteria 2782
266 Ga0495593_0006715 3300047673 Bacteria 6734
267 Ga0495593_0027606 3300047673 Bacteria 3123
268 Ga0495593_0154423 3300047673 Bacteria 1160
269 Ga0495614_0010189 3300048089 Bacteria 4145
270 Ga0495614_0017741 3300048089 Bacteria 3089
271 Ga0495614_0045164 3300048089 Bacteria 1889
272 Ga0495614_0101753 3300048089 Bacteria 1256
273 Ga0495626_0003897 3300048091 Bacteria 9352
274 Ga0496108_0330202 3300048911 Bacteria 1330
275 Ga0496109_0009429 3300048912 Bacteria 8320
276 Ga0495678_008740 3300049459 Bacteria 5077
277 Ga0501031_0311109 3300049568 Bacteria 1021
278 Ga0501032_0030730 3300049569 Bacteria 3686
279 Ga0501033_0056925 3300049570 Bacteria 2889
280 Ga0501033_0086544 3300049570 Bacteria 2294
281 Ga0501034_0005896 3300049571 Bacteria 13302
282 Ga0501034_0050903 3300049571 Bacteria 4176
283 Ga0501034_0350679 3300049571 Bacteria 1404
284 Ga0501034_0388109 3300049571 Bacteria 1320
285 Ga0501036_0001300 3300049572 Bacteria 19128
286 Ga0501036_0008526 3300049572 Bacteria 8404
287 Ga0501037_0041770 3300049573 Bacteria 3371
288 Ga0501037_0200867 3300049573 Bacteria 1409
289 Ga0501037_0212565 3300049573 Bacteria 1363
290 Ga0501038_0001829 3300049574 Bacteria 19695
291 Ga0501038_0017872 3300049574 Bacteria 6406
292 Ga0501038_0069999 3300049574 Bacteria 2979
293 Ga0501039_0232663 3300049575 Bacteria 1449
294 Ga0501040_0295080 3300049576 Bacteria 1159
295 Ga0501042_0021888 3300049578 Bacteria 4462
296 Ga0501043_0003043 3300049579 Bacteria 13927
297 Ga0501043_0139978 3300049579 Bacteria 1895
298 Ga0501046_0031837 3300049580 Bacteria 4272
299 Ga0501046_0038566 3300049580 Bacteria 3832
300 Ga0501047_0021322 3300049581 Bacteria 6219
301 Ga0501047_0234831 3300049581 Bacteria 1685
302 Ga0501047_0576257 3300049581 Bacteria 948
303 Ga0501048_0009023 3300049582 Bacteria 7510
304 Ga0501067_0220303 3300049583 Bacteria 1057
305 Ga0501070_0263629 3300049586 Bacteria 1408
306 Ga0501070_0397576 3300049586 Bacteria 1115
307 Ga0501235_010406 3300049669 Bacteria 2032
308 Ga0501080_0152648 3300049742 Bacteria 2134
309 Ga0501035_0097399 3300049822 Bacteria 2583
310 Ga0501044_0020844 3300049823 Bacteria 6997
311 Ga0501044_0148735 3300049823 Bacteria 2325
312 Ga0501044_0256838 3300049823 Bacteria 1686
313 nmdc:mga03n38_4473_c1 3300050490 Bacteria 4639
314 Ga0500644_0012916 3300053088 Bacteria 2321
315 Ga0500640_030089 3300053095 Bacteria 2376
316 Ga0500560_003921 3300053107 Bacteria 3086
317 Ga0500572_030430 3300053111 Bacteria 1501
318 Ga0500573_0051608 3300053140 Bacteria 2365
319 Ga0500600_0038742 3300053149 Bacteria 2758
320 Ga0466962_0000462 3300061719 Bacteria 17629
321 Ga0466962_0041003 3300061719 Bacteria 2215
322 Ga0466962_0076837 3300061719 Bacteria 1596
323 2585310201 2582581313 Bacteria 10042643
324 2585313659 2582581314 Bacteria 11452267
325 2616694898 2616644814 Bacteria 11555299
326 2616694900 2616644814 Bacteria 11555299
327 2644262502 2643221647 Bacteria 10741251
328 2644262504 2643221647 Bacteria 10741251
329 2644437298 2643221678 Bacteria 9540101
330 2644629040 2643221714 Bacteria 9015452
331 2784588756 2784132148 Bacteria 8627943
332 2785369677 2784746768 Bacteria 10036182
333 2785369679 2784746768 Bacteria 10036182
334 2786670767 2786546132 Bacteria 10419719
335 2808842199 2808606359 Bacteria 9866990
336 2808920732 2808606375 Bacteria 9466072
337 2809232369 2808606448 Bacteria 8656184
338 2812357919 2811994879 Bacteria 9313447
339 2819695571 2818991463 Bacteria 7948711
340 2852636490 2852635781 Bacteria 8251373
341 2862285806 2862281513 Bacteria 9621493
342 2862511644 2862507626 Bacteria 9425308
343 2862579085 2862574272 Bacteria 10567477
344 2867436919 2867428634 Bacteria 9590268
345 2873155567 2873151551 Bacteria 8625867
346 2877680950 2877676314 Bacteria 9512378
347 2877680952 2877676314 Bacteria 9512378
348 2912719785 2912715099 Bacteria 9460473
349 2912719787 2912715099 Bacteria 9460473
350 2919469384 2919468124 Bacteria 9133025
351 2946067933 2946064051 Bacteria 8957905
352 2946076060 2946072368 Bacteria 8999607
353 2947229010 2947224130 Bacteria 9938529
354 2954007177 2954002825 Bacteria 9173742
355 2954386055 2954380949 Bacteria 10050426
356 2954386057 2954380949 Bacteria 10050426
357 2954677093 2954673503 Bacteria 9685905
358 2954687063 2954682443 Bacteria 9862841
359 2954696702 2954691527 Bacteria 10720516
360 2954696704 2954691527 Bacteria 10720516
361 2954705457 2954701450 Bacteria 10834262
362 2954705459 2954701450 Bacteria 10834262
363 2954716057 2954711539 Bacteria 10867210
364 2954726002 2954721474 Bacteria 10456478
365 2954735800 2954731030 Bacteria 10243860
366 2954744937 2954740390 Bacteria 10229294
367 2954754665 2954749733 Bacteria 10366972
368 2954763924 2954759201 Bacteria 9358192
369 3006500909 3006493962 Bacteria 8825450
370 8023627053 8023623736 Bacteria 8593882
371 Ga0307515_10174770
372 rootH1_10044143
373 rootH2_10026737
374 rootH2_10026961
375 rootL2_10008484
376 rootL2_10018280
377 Ga0006562J51391_1047657
378 Ga0006562J51391_1131943
379 Ga0068867_100366016
380 Ga0068853_100174753
381 Ga0068854_100125473
382 Ga0081539_10172577
383 Ga0075363_100011686
384 Ga0105251_10027088
385 Ga0105250_10031897
386 Ga0105245_10124971
387 Ga0105245_10315199
388 Ga0105243_10047041
389 Ga0105248_10035515
390 Ga0105238_10183527
391 Ga0105246_10001065
392 Ga0105246_10399566
393 Ga0157375_10625140
394 Ga0182008_10005008
395 Ga0182006_1012270
396 Ga0182007_10003140
397 Ga0183367_1005
398 Ga0209758_1002545
399 Ga0207713_1091210
400 Ga0207694_10139661
401 Ga0207687_10153967
402 Ga0207709_10030479
403 Ga0207639_10126591
404 Ga0209371_1010774
405 Ga0307517_10004653
406 Ga0307515_10001466
407 Ga0307515_10289050
408 Ga0268256_1011607
409 Ga0307511_10003532
410 Ga0307511_10060832
411 Ga0307512_10003998
412 Ga0307513_10007043
413 Ga0307513_10013728
414 Ga0307513_10076695
415 Ga0307513_10219219
416 Ga0307509_10008949
417 Ga0307509_10010098
418 Ga0307508_10006721
419 Ga0307508_10026544
420 Ga0307508_10052786
421 Ga0307514_10007468
422 Ga0307514_10114722
423 Ga0307516_10004356
424 Ga0307518_10082783
425 Ga0307518_10106116
426 Ga0307507_10061249
427 Ga0307507_10066709
428 Ga0307510_10002698
429 Ga0307510_10017502
430 Ga0307510_10025861
431 Ga0395900_0076853
432 Ga0395898_0001874
433 Ga0395898_0004814
434 Ga0395898_0141510
435 Ga0395898_0163126
436 Ga0395905_0237846
437 Ga0395901_0159855
438 Ga0439436_0000339
439 Ga0451800_1463654
440 Ga0451837_0275838
441 Ga0451849_0826688
442 Ga0439433_0043862
443 Ga0439448_0001490
444 Ga0439449_0026792
445 Ga0439457_003081
446 Ga0439462_0007706
447 Ga0450903_000424
448 Ga0439458_0000659
449 Ga0439458_0016755
450 Ga0450901_008654
451 Ga0466969_0031582
452 Ga0466969_0113346
453 Ga0466972_0023862
454 Ga0466972_0035757
455 Ga0466972_0078023
456 Ga0466965_0000260
457 Ga0466965_0019899
458 Ga0466965_0062494
459 Ga0466966_0001936
460 Ga0466966_0007199
461 Ga0466961_0001003
462 Ga0466961_0004610
463 Ga0466961_0030817
464 Ga0466961_0080121
465 Ga0466963_0000260
466 Ga0466964_0000312
467 Ga0466971_0010947
468 Ga0466971_0036508
469 Ga0466971_0073570
470 Ga0466968_0002551
471 Ga0466970_0000472
472 Ga0466970_0005913
473 Ga0466957_0002000
474 Ga0466960_0004008
475 Ga0466959_0002699
476 Ga0466959_0127744
477 Ga0466958_0001045
478 Ga0466967_0000141
479 Ga0466967_0024357
480 Ga0495617_014911
481 Ga0495592_0006039
482 Ga0495592_0071697
483 Ga0495603_0012192
484 Ga0495603_0105140
485 Ga0495590_0035536
486 Ga0495590_0051270
487 Ga0495629_0010132
488 Ga0495629_0028870
489 Ga0495629_0055723
490 Ga0495629_0140659
491 Ga0495629_0204581
492 Ga0495629_0220757
493 Ga0495638_0051871
494 Ga0495638_0166318
495 Ga0495638_0289250
496 Ga0495641_0040444
497 Ga0495651_0164999
498 Ga0495582_0024970
499 Ga0495605_0006244
500 Ga0495662_0000568
501 Ga0495662_0001073
502 Ga0495662_0002523
503 Ga0495664_0091115
504 Ga0495664_0110032
505 Ga0495585_0038059
506 Ga0495585_0040869
507 Ga0495594_0003449
508 Ga0495594_0095645
509 Ga0495594_0214161
510 Ga0495596_0025964
511 Ga0495607_0059251
512 Ga0495583_0007917
513 Ga0495606_0043932
514 Ga0495606_0076270
515 Ga0495606_0216033
516 Ga0495610_0158132
517 Ga0495616_0017617
518 Ga0495618_0019356
519 Ga0495618_0093670
520 Ga0495620_0008620
521 Ga0495620_0013625
522 Ga0495628_0142527
523 Ga0495630_0103187
524 Ga0495631_0002495
525 Ga0495632_0057055
526 Ga0495637_0066102
527 Ga0495643_0003384
528 Ga0495643_0178663
529 Ga0495644_0089105
530 Ga0495648_0005168
531 Ga0495648_0043733
532 Ga0495666_0013430
533 Ga0495642_0124425
534 Ga0495652_0027118
535 Ga0495640_0008372
536 Ga0495640_0053999
537 Ga0495586_0173696
538 Ga0495586_0190444
539 Ga0495587_0347928
540 Ga0495609_0018384
541 Ga0495597_0004150
542 Ga0495597_0013593
543 Ga0495597_0067980
544 Ga0495645_0206686
545 Ga0495633_0040300
546 Ga0495633_0046080
547 Ga0495633_0092373
548 Ga0495668_0011870
549 Ga0495668_0023301
550 Ga0495668_0211827
551 Ga0495634_0004986
552 Ga0495611_0009840
553 Ga0495611_0096427
554 Ga0495611_0128636
555 Ga0495625_0006786
556 Ga0495625_0016179
557 Ga0495625_0031162
558 Ga0495625_0040699
559 Ga0495625_0167506
560 Ga0495625_0194813
561 Ga0495635_0044718
562 Ga0495635_0090795
563 Ga0495661_0098477
564 Ga0495588_0007630
565 Ga0495588_0037306
566 Ga0495588_0070334
567 Ga0495588_0097725
568 Ga0495657_0000588
569 Ga0495657_0001948
570 Ga0495657_0002259
571 Ga0495657_0026258
572 Ga0495623_0037551
573 Ga0495646_0085175
574 Ga0495646_0118714
575 Ga0495613_0004048
576 Ga0495613_0010586
577 Ga0495613_0014565
578 Ga0495613_0050946
579 Ga0495613_0286566
580 Ga0495670_0030880
581 Ga0495670_0070778
582 Ga0495671_0026960
583 Ga0495671_0046299
584 Ga0495671_0083622
585 Ga0495671_0108453
586 Ga0495671_0116693
587 Ga0495649_0010506
588 Ga0495649_0012549
589 Ga0495649_0072523
590 Ga0495649_0139804
591 Ga0495589_0005684
592 Ga0495589_0062786
593 Ga0495589_0083118
594 Ga0495589_0139535
595 Ga0495600_0017809
596 Ga0495600_0040638
597 Ga0495600_0195454
598 Ga0495660_0004298
599 Ga0495660_0100098
600 Ga0495660_0161456
601 Ga0495581_0014794
602 Ga0495581_0173162
603 Ga0495581_0190287
604 Ga0495604_0000281
605 Ga0495604_0039066
606 Ga0495636_0002432
607 Ga0495636_0011805
608 Ga0495636_0015067
609 Ga0495636_0034123
610 Ga0495674_0123012
611 Ga0495672_0043835
612 Ga0495672_0182263
613 Ga0495676_0006699
614 Ga0495676_0013135
615 Ga0495676_0157225
616 Ga0495676_0238138
617 Ga0495676_0251765
618 Ga0495680_0004961
619 Ga0495683_0101138
620 Ga0495687_003738
621 Ga0495687_011541
622 Ga0495687_022758
623 Ga0495675_0031724
624 Ga0495675_0187726
625 Ga0495677_0040758
626 Ga0495685_003879
627 Ga0495685_003940
628 Ga0495685_010943
629 Ga0495685_020957
630 Ga0495685_035677
631 Ga0495685_040206
632 Ga0495681_0000726
633 Ga0495681_0056731
634 Ga0495686_0010070
635 Ga0495686_0045343
636 Ga0495593_0006715
637 Ga0495593_0027606
638 Ga0495593_0154423
639 Ga0495614_0010189
640 Ga0495614_0017741
641 Ga0495614_0045164
642 Ga0495614_0101753
643 Ga0495626_0003897
644 Ga0496108_0330202
645 Ga0496109_0009429
646 Ga0495678_008740
647 Ga0501031_0311109
648 Ga0501032_0030730
649 Ga0501033_0056925
650 Ga0501033_0086544
651 Ga0501034_0005896
652 Ga0501034_0050903
653 Ga0501034_0350679
654 Ga0501034_0388109
655 Ga0501036_0001300
656 Ga0501036_0008526
657 Ga0501037_0041770
658 Ga0501037_0200867
659 Ga0501037_0212565
660 Ga0501038_0001829
661 Ga0501038_0017872
662 Ga0501038_0069999
663 Ga0501039_0232663
664 Ga0501040_0295080
665 Ga0501042_0021888
666 Ga0501043_0003043
667 Ga0501043_0139978
668 Ga0501046_0031837
669 Ga0501046_0038566
670 Ga0501047_0021322
671 Ga0501047_0234831
672 Ga0501047_0576257
673 Ga0501048_0009023
674 Ga0501067_0220303
675 Ga0501070_0263629
676 Ga0501070_0397576
677 Ga0501235_010406
678 Ga0501080_0152648
679 Ga0501035_0097399
680 Ga0501044_0020844
681 Ga0501044_0148735
682 Ga0501044_0256838
683 nmdc:mga03n38_4473_c1
684 Ga0500644_0012916
685 Ga0500640_030089
686 Ga0500560_003921
687 Ga0500572_030430
688 Ga0500573_0051608
689 Ga0500600_0038742
690 Ga0466962_0000462
691 Ga0466962_0041003
692 Ga0466962_0076837
693 2585310201
694 2585313659
695 2616694898
696 2616694900
697 2644262502
698 2644262504
699 2644437298
700 2644629040
701 2784588756
702 2785369677
703 2785369679
704 2786670767
705 2808842199
706 2808920732
707 2809232369
708 2812357919
709 2819695571
710 2852636490
711 2862285806
712 2862511644
713 2862579085
714 2867436919
715 2873155567
716 2877680950
717 2877680952
718 2912719785
719 2912719787
720 2919469384
721 2946067933
722 2946076060
723 2947229010
724 2954007177
725 2954386055
726 2954386057
727 2954677093
728 2954687063
729 2954696702
730 2954696704
731 2954705457
732 2954705459
733 2954716057
734 2954726002
735 2954735800
736 2954744937
737 2954754665
738 2954763924
739 3006500909
740 8023627053

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

20

84

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eet-assembly2.cif.gz_B-3 crystal structure of putative gntr-family transcriptional regulator 0.978 21 72
5d4r-assembly1.cif.gz_A crystal structure of arar(dbd) in complex with operator ore1 0.9496 21 85
5d4s-assembly1.cif.gz_B crystal structure of arar(dbd) in complex with operator orx1 0.9449 21 85
4h0e-assembly1.cif.gz_A crystal structure of mutant orr3 in complex with ntd of arar 0.9413 21 85
4egz-assembly1.cif.gz_B crystal structure of arar(dbd) in complex with operator orr3 0.9363 21 85
ID Description Score Start End Superfamily
af_P0A8W0_27_98_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9644 19 85 1.10.10.10
af_P39389_1_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9589 21 85 1.10.10.10
5d4rA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9496 21 85 1.10.10.10
af_P45544_5_80_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9471 21 85 1.10.10.10
af_P31475_2_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9449 21 85 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A6G3AEU8-F1-model_v4 GntR family transcriptional regulator 0.9857 101 301
AF-A0A6G3AEU8-F1-model_v4 GntR family transcriptional regulator 0.9809 101 301
AF-A0A7W7QMX3-F1-model_v4 GntR family transcriptional regulator 0.9533 21 85 GO:0003677
GO:0003700
GO:0045892
AF-A0A1C3WDP9-F1-model_v4 GntR family transcriptional regulator, phosphonate transport system regulatory protein 0.9525 21 87 GO:0003677
GO:0003700
GO:0045892
AF-A0A6B3H2V6-F1-model_v4 GntR family transcriptional regulator 0.9442 119 302

Map