F433247

General Info

Members Datasets Scaffolds Average Seq Length
395 277 324 334

Family's Representative Sequence

Representative Sequence 3300031456|Ga0307513_10154115|Ga0307513_101541153
Length 371
Sequence MIRRLLAAPVLWVWLLSPAAAIDAASINNAEYEAAKPPGSGKVDALVIKVQVLLDRARFSPGEIDGKLGENAQKALKAFAEARGFKPSQPLTPEVWKALAATSSDAVVTEYKISNDDIKGPFLERLPARMEDMKDLKALGYTSAREALAEKFHMSEGLLEALNPKKKFDQAGESILVANVLGSDAKLKVDRIEVDKSRQTVKAFASSGELVAFFPATVGSKEKPTPSGALKVVSVDANPNYRYNPDYKFRGVKSKEAFSIKPGPNNPAGSFWIGLSAEGYGIHGTSNPSTVSKTESHGCVRLTNWDAGLLGRSIKKGTAVMFVEAAPAGGRASADGGKNRRRLTICDQAAATLFKSASRGTNVRWHAADRY

Samples

Sample ID Description Type Environment
1 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
2 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
3 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
4 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
5 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
6 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
7 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
8 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
9 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
10 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
11 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
12 2791355199
13 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
14 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
15 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
16 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
17 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
18 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
19 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
20 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
21 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
22 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
23 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
24 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
25 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
26 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
27 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
28 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
29 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
30 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
31 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
32 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
33 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
34 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
35 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
36 2906610324
37 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
38 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
39 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
40 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
41 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
42 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
43 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
44 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
45 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
46 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
47 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
48 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
49 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
50 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
51 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
52 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
53 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
54 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
55 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
56 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
57 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
58 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
59 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
60 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
61 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
62 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
63 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
64 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
65 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
66 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
67 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
68 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
69 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
70 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
71 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
72 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
73 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
74 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
75 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
76 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
77 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
78 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
79 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
80 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
81 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
82 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
83 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
84 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
85 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
86 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
87 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
88 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
89 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
90 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
91 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
92 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
93 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
94 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
95 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
96 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
97 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
98 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
99 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
100 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
101 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
102 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
103 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
104 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
105 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
106 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
107 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
108 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
109 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
110 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
111 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
112 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
113 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
114 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
115 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
116 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
117 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
118 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
119 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
120 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
121 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
122 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
123 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
124 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
125 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
126 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
127 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
128 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
129 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
130 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
131 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
132 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
133 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
134 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
135 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
136 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
137 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
138 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
139 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
140 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
141 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
142 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
143 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
144 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
145 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
146 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
147 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
148 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
166 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
167 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
168 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
169 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
170 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
172 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
173 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
174 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
175 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
176 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
177 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
178 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
179 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
180 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
181 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
182 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
183 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
184 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
185 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
186 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
187 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
188 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
189 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
190 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
191 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
192 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
193 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
194 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
195 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
196 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
197 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
198 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
199 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
200 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
201 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
202 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
203 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
204 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
205 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
206 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
207 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
208 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
209 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
210 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
211 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
212 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
213 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
214 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
215 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
216 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
217 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
218 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
219 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
220 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
221 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
222 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
223 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
224 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
225 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
226 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
227 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
228 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
229 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
230 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
231 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
232 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
233 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
234 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
235 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
236 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
237 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
238 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
239 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
240 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
241 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
242 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
243 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
244 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
245 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
246 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
247 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
248 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
249 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
250 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
251 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
252 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
253 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
254 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
255 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
256 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
257 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
258 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
259 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
260 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
261 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
262 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
263 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
264 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
265 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
266 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
267 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
268 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
269 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
270 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
271 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
272 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
273 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
274 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
275 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
276 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule
277 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.44
Metatranscriptomes 0
Isolates 17.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.11
Nodule 14.18
Rhizoplane 4.05
Rhizosphere 64.05
Stem 0
Stem Tuber 0
Unclassified 8.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003824 3300003203 Bacteria 7032
2 JGI25153J46596_10004919 3300003215 Bacteria 7102
3 JGI25404J52841_10001188 3300003659 Bacteria 4458
4 JGI25404J52841_10005145 3300003659 Bacteria 2695
5 JGI25404J52841_10016341 3300003659 Bacteria 1611
6 JGI25404J52841_10018301 3300003659 Bacteria 1518
7 Ga0065165_1001230 3300005262 Bacteria 29318
8 Ga0070690_100134513 3300005330 Unclassified 1673
9 Ga0068869_100041021 3300005334 Bacteria 3312
10 Ga0068869_100126635 3300005334 Bacteria 1959
11 Ga0070680_100291688 3300005336 Unclassified 1383
12 Ga0068868_100035129 3300005338 Bacteria 3873
13 Ga0068868_100058744 3300005338 Bacteria 3040
14 Ga0070660_100212270 3300005339 Bacteria 1572
15 Ga0070660_100235009 3300005339 Bacteria 1492
16 Ga0070689_100432873 3300005340 Bacteria 1117
17 Ga0070687_100038286 3300005343 Bacteria 2403
18 Ga0070687_100262475 3300005343 Bacteria 1078
19 Ga0070668_100007192 3300005347 Bacteria 8250
20 Ga0070668_100043305 3300005347 Bacteria 3452
21 Ga0070668_100055140 3300005347 Bacteria 3067
22 Ga0070668_100063510 3300005347 Bacteria 2862
23 Ga0070669_100143395 3300005353 Bacteria 1843
24 Ga0070671_100003082 3300005355 Bacteria 12968
25 Ga0070674_100084720 3300005356 Bacteria 2273
26 Ga0070673_100215203 3300005364 Bacteria 1661
27 Ga0070659_100024567 3300005366 Bacteria 4620
28 Ga0070667_100072674 3300005367 Bacteria 2931
29 Ga0070714_100422806 3300005435 Bacteria 1262
30 Ga0070700_100164733 3300005441 Bacteria 1530
31 Ga0070700_100200710 3300005441 Bacteria 1401
32 Ga0070694_100079884 3300005444 Bacteria 2271
33 Ga0070663_100006693 3300005455 Bacteria 6950
34 Ga0070663_100013037 3300005455 Bacteria 5280
35 Ga0070663_100127042 3300005455 Bacteria 1933
36 Ga0070678_100023944 3300005456 Bacteria 4078
37 Ga0070678_100078023 3300005456 Bacteria 2500
38 Ga0070678_100354912 3300005456 Bacteria 1262
39 Ga0070662_100089794 3300005457 Bacteria 2305
40 Ga0070662_100132445 3300005457 Bacteria 1924
41 Ga0068867_100305805 3300005459 Bacteria 1312
42 Ga0070685_10083909 3300005466 Bacteria 1915
43 Ga0070698_100159702 3300005471 Bacteria 2198
44 Ga0070699_100068026 3300005518 Bacteria 3093
45 Ga0070697_100102027 3300005536 Bacteria 2384
46 Ga0070672_100029567 3300005543 Bacteria 4110
47 Ga0070665_100030244 3300005548 Bacteria 5450
48 Ga0070665_100038083 3300005548 Bacteria 4834
49 Ga0070665_100119765 3300005548 Bacteria 2634
50 Ga0070665_100125248 3300005548 Bacteria 2572
51 Ga0070665_100216739 3300005548 Bacteria 1915
52 Ga0070665_100430939 3300005548 Bacteria 1328
53 Ga0070704_100325343 3300005549 Bacteria 1289
54 Ga0068855_100041998 3300005563 Bacteria 5419
55 Ga0070664_100282898 3300005564 Bacteria 1496
56 Ga0068857_100119248 3300005577 Bacteria 2375
57 Ga0068857_100218669 3300005577 Bacteria 1739
58 Ga0068856_100033390 3300005614 Bacteria 5038
59 Ga0068856_100066905 3300005614 Bacteria 3550
60 Ga0070702_100016652 3300005615 Bacteria 3775
61 Ga0068852_100438008 3300005616 Bacteria 1292
62 Ga0068859_100026003 3300005617 Bacteria 5872
63 Ga0068859_100068312 3300005617 Bacteria 3588
64 Ga0068861_100091001 3300005719 Bacteria 2408
65 Ga0068863_100135958 3300005841 Bacteria 2348
66 Ga0068858_100057906 3300005842 Bacteria 3581
67 Ga0068858_100226339 3300005842 Bacteria 1772
68 Ga0068860_100064619 3300005843 Bacteria 3475
69 Ga0068860_100077872 3300005843 Bacteria 3153
70 Ga0068862_100081382 3300005844 Bacteria 2809
71 Ga0068862_100113705 3300005844 Bacteria 2378
72 Ga0068862_100288000 3300005844 Bacteria 1508
73 Ga0081455_10006836 3300005937 Bacteria 12152
74 Ga0081455_10012953 3300005937 Bacteria 8272
75 Ga0081538_10030517 3300005981 Bacteria 3658
76 Ga0081540_1000914 3300005983 Bacteria 26584
77 Ga0081540_1004331 3300005983 Bacteria 10872
78 Ga0081540_1012457 3300005983 Bacteria 5596
79 Ga0081540_1014058 3300005983 Bacteria 5158
80 Ga0081539_10001660 3300005985 Bacteria 36067
81 Ga0081539_10021290 3300005985 Bacteria 4339
82 Ga0081539_10043556 3300005985 Bacteria 2600
83 Ga0075365_10036550 3300006038 Bacteria 3182
84 Ga0075363_100085455 3300006048 Bacteria 1731
85 Ga0075364_10021649 3300006051 Bacteria 4052
86 Ga0075367_10014293 3300006178 Bacteria 4294
87 Ga0075367_10088520 3300006178 Bacteria 1882
88 Ga0075367_10205122 3300006178 Bacteria 1232
89 Ga0075366_10017013 3300006195 Bacteria 4181
90 Ga0075366_10047147 3300006195 Bacteria 2554
91 Ga0097621_100126539 3300006237 Bacteria 2171
92 Ga0075370_10074262 3300006353 Bacteria 1949
93 Ga0068871_100106095 3300006358 Bacteria 2358
94 Ga0068865_100004347 3300006881 Bacteria 8548
95 Ga0097620_100026006 3300006931 Bacteria 5872
96 Ga0097620_100068312 3300006931 Bacteria 3588
97 Ga0099794_10071694 3300007265 Bacteria 1697
98 Ga0099794_10121768 3300007265 Bacteria 1313
99 Ga0105240_10106394 3300009093 Bacteria 3403
100 Ga0105245_10006498 3300009098 Bacteria 10274
101 Ga0105245_10062313 3300009098 Bacteria 3365
102 Ga0105245_10119392 3300009098 Bacteria 2461
103 Ga0105245_10193316 3300009098 Bacteria 1950
104 Ga0105247_10040165 3300009101 Bacteria 2859
105 Ga0105247_10189073 3300009101 Bacteria 1378
106 Ga0105247_10197996 3300009101 Bacteria 1348
107 Ga0114129_10268236 3300009147 Bacteria 2285
108 Ga0105243_10100635 3300009148 Bacteria 2398
109 Ga0105243_10111755 3300009148 Bacteria 2287
110 Ga0105243_10114274 3300009148 Bacteria 2265
111 Ga0105241_10110078 3300009174 Bacteria 2203
112 Ga0105241_10116663 3300009174 Bacteria 2144
113 Ga0105241_10430746 3300009174 Bacteria 1163
114 Ga0105242_10057151 3300009176 Bacteria 3194
115 Ga0105242_10416934 3300009176 Unclassified 1257
116 Ga0105248_10011607 3300009177 Bacteria 9704
117 Ga0105248_10033354 3300009177 Bacteria 5752
118 Ga0105248_10152289 3300009177 Bacteria 2609
119 Ga0105248_10200414 3300009177 Bacteria 2249
120 Ga0105237_10020174 3300009545 Bacteria 6880
121 Ga0105238_10211476 3300009551 Bacteria 1916
122 Ga0105238_10273315 3300009551 Bacteria 1670
123 Ga0105239_10011911 3300010375 Bacteria 9701
124 Ga0105239_10113591 3300010375 Bacteria 3003
125 Ga0105239_10117394 3300010375 Bacteria 2953
126 Ga0105239_10149889 3300010375 Bacteria 2603
127 Ga0105239_10792987 3300010375 Bacteria 1085
128 Ga0105246_10025300 3300011119 Bacteria 3869
129 Ga0105246_10103395 3300011119 Bacteria 2078
130 Ga0105246_10186953 3300011119 Bacteria 1600
131 Ga0157369_10284214 3300013105 Bacteria 1723
132 Ga0157378_10074668 3300013297 Bacteria 3051
133 Ga0157378_10209402 3300013297 Bacteria 1848
134 Ga0163163_10019111 3300014325 Bacteria 6429
135 Ga0157380_10054606 3300014326 Bacteria 3171
136 Ga0157380_10596251 3300014326 Bacteria 1092
137 Ga0157380_10621033 3300014326 Bacteria 1073
138 Ga0157377_10002840 3300014745 Bacteria 7736
139 Ga0157379_10014951 3300014968 Bacteria 6807
140 Ga0157379_10071213 3300014968 Bacteria 3111
141 Ga0157379_10157229 3300014968 Bacteria 2051
142 Ga0157379_10251602 3300014968 Bacteria 1604
143 Ga0157376_10332734 3300014969 Bacteria 1448
144 Ga0163161_10239489 3300017792 Bacteria 1411
145 Ga0214542_1001925 3300021321 Bacteria 42950
146 Ga0214545_1000003 3300021324 Bacteria 720274
147 Ga0214543_1000002 3300021327 Bacteria 712733
148 Ga0209758_1000120 3300025297 Bacteria 192212
149 Ga0209758_1017704 3300025297 Bacteria 3529
150 Ga0207426_1000328 3300025302 Bacteria 90659
151 Ga0209257_1012853 3300025304 Bacteria 3802
152 Ga0207697_10009200 3300025315 Bacteria 4275
153 Ga0207697_10110186 3300025315 Bacteria 1178
154 Ga0207688_10039619 3300025901 Bacteria 2617
155 Ga0207688_10102259 3300025901 Bacteria 1656
156 Ga0207647_10003457 3300025904 Bacteria 11854
157 Ga0207645_10139379 3300025907 Bacteria 1580
158 Ga0207645_10175317 3300025907 Bacteria 1406
159 Ga0207654_10141008 3300025911 Bacteria 1537
160 Ga0207671_10028442 3300025914 Bacteria 4176
161 Ga0207660_10135124 3300025917 Bacteria 1881
162 Ga0207660_10211036 3300025917 Bacteria 1520
163 Ga0207657_10101393 3300025919 Bacteria 2389
164 Ga0207657_10153379 3300025919 Bacteria 1875
165 Ga0207657_10162309 3300025919 Bacteria 1814
166 Ga0207649_10185933 3300025920 Bacteria 1458
167 Ga0207681_10175748 3300025923 Bacteria 1627
168 Ga0207681_10308575 3300025923 Bacteria 1254
169 Ga0207687_10004146 3300025927 Bacteria 9709
170 Ga0207687_10136261 3300025927 Bacteria 1857
171 Ga0207664_10258020 3300025929 Bacteria 1523
172 Ga0207644_10128538 3300025931 Bacteria 1937
173 Ga0207690_10020007 3300025932 Bacteria 4129
174 Ga0207706_10027152 3300025933 Bacteria 5120
175 Ga0207706_10029379 3300025933 Bacteria 4907
176 Ga0207706_10063340 3300025933 Bacteria 3256
177 Ga0207670_10056924 3300025936 Bacteria 2649
178 Ga0207670_10272827 3300025936 Bacteria 1315
179 Ga0207669_10138429 3300025937 Bacteria 1686
180 Ga0207691_10013516 3300025940 Bacteria 7808
181 Ga0207711_10022648 3300025941 Bacteria 5255
182 Ga0207711_10120907 3300025941 Bacteria 2338
183 Ga0207711_10150371 3300025941 Bacteria 2100
184 Ga0207711_10244754 3300025941 Bacteria 1645
185 Ga0207689_10012148 3300025942 Bacteria 7371
186 Ga0207689_10050552 3300025942 Bacteria 3427
187 Ga0207667_10041493 3300025949 Bacteria 4894
188 Ga0207668_10147624 3300025972 Bacteria 1816
189 Ga0207668_10246076 3300025972 Bacteria 1449
190 Ga0207658_10096921 3300025986 Bacteria 2301
191 Ga0207658_10251492 3300025986 Bacteria 1502
192 Ga0207677_10027440 3300026023 Bacteria 3586
193 Ga0207677_10046125 3300026023 Bacteria 2916
194 Ga0207677_10096674 3300026023 Bacteria 2162
195 Ga0207703_10137810 3300026035 Bacteria 2114
196 Ga0207639_10269039 3300026041 Bacteria 1494
197 Ga0207678_10024274 3300026067 Bacteria 5295
198 Ga0207678_10084356 3300026067 Bacteria 2717
199 Ga0207708_10060639 3300026075 Bacteria 2887
200 Ga0207708_10088801 3300026075 Bacteria 2381
201 Ga0207702_10032268 3300026078 Bacteria 4370
202 Ga0207702_10153258 3300026078 Bacteria 2098
203 Ga0207641_10120907 3300026088 Bacteria 2337
204 Ga0207641_10124522 3300026088 Bacteria 2306
205 Ga0207641_10179624 3300026088 Bacteria 1938
206 Ga0207648_10010726 3300026089 Bacteria 8662
207 Ga0207648_10301611 3300026089 Bacteria 1437
208 Ga0207676_10182675 3300026095 Bacteria 1838
209 Ga0207674_10051710 3300026116 Bacteria 4193
210 Ga0207674_10064093 3300026116 Bacteria 3707
211 Ga0207675_100031707 3300026118 Bacteria 4924
212 Ga0207683_10022269 3300026121 Bacteria 5437
213 Ga0207683_10063932 3300026121 Bacteria 3242
214 Ga0207683_10250673 3300026121 Bacteria 1616
215 Ga0207698_10092240 3300026142 Bacteria 2482
216 Ga0207698_10521765 3300026142 Bacteria 1159
217 Ga0209588_1000614 3300027671 Bacteria 9019
218 Ga0209588_1006071 3300027671 Bacteria 3489
219 Ga0209588_1058268 3300027671 Bacteria 1248
220 Ga0209813_10035731 3300027866 Bacteria 1489
221 Ga0268266_10056532 3300028379 Bacteria 3375
222 Ga0268266_10089106 3300028379 Bacteria 2701
223 Ga0268266_10536066 3300028379 Bacteria 1120
224 Ga0268265_10161370 3300028380 Bacteria 1904
225 Ga0268264_10054016 3300028381 Bacteria 3353
226 Ga0307517_10000053 3300028786 Bacteria 155723
227 Ga0307517_10057283 3300028786 Bacteria 3779
228 Ga0307515_10015192 3300028794 Bacteria 14202
229 Ga0265330_10007891 3300031235 Bacteria 5158
230 Ga0307513_10154115 3300031456 Bacteria 2201
231 Ga0307508_10026742 3300031616 Bacteria 5229
232 Ga0307508_10255227 3300031616 Bacteria 1349
233 Ga0307516_10050029 3300031730 Bacteria 4102
234 Ga0307405_10022480 3300031731 Bacteria 3566
235 Ga0307410_10059473 3300031852 Bacteria 2609
236 Ga0307412_10031710 3300031911 Bacteria 3341
237 Ga0307416_100204672 3300032002 Bacteria 1876
238 Ga0307411_10427169 3300032005 Bacteria 1102
239 Ga0307415_100270202 3300032126 Bacteria 1392
240 Ga0307510_10016828 3300033180 Bacteria 8627
241 Ga0307510_10017231 3300033180 Bacteria 8525
242 Ga0373925_0114935 3300037068 Bacteria 2083
243 Ga0451802_1046101 3300041460 Bacteria 1358
244 Ga0495603_0055879 3300046455 Bacteria 2339
245 Ga0495590_0063162 3300046457 Bacteria 1296
246 Ga0495638_0046503 3300046460 Bacteria 2726
247 Ga0495605_0059071 3300046474 Bacteria 1842
248 Ga0495605_0063075 3300046474 Bacteria 1769
249 Ga0495585_0098018 3300046492 Bacteria 1571
250 Ga0495596_0047100 3300046500 Bacteria 1692
251 Ga0495610_0076502 3300046512 Bacteria 1548
252 Ga0495616_0136732 3300046513 Bacteria 1119
253 Ga0495643_0073552 3300046522 Bacteria 1791
254 Ga0495644_0015686 3300046523 Bacteria 2904
255 Ga0495598_0015792 3300046537 Bacteria 1913
256 Ga0495597_0014260 3300046542 Bacteria 3787
257 Ga0495622_0107883 3300046557 Bacteria 1275
258 Ga0495633_0018822 3300046558 Bacteria 3500
259 Ga0495633_0070981 3300046558 Bacteria 1625
260 Ga0495656_0004019 3300046615 Bacteria 5002
261 Ga0495668_0033854 3300046616 Bacteria 2869
262 Ga0495625_0105934 3300046660 Bacteria 1926
263 Ga0495635_0166676 3300046663 Bacteria 1499
264 Ga0495659_0012271 3300046664 Bacteria 2772
265 Ga0495659_0012448 3300046664 Bacteria 2755
266 Ga0495661_0152227 3300046665 Bacteria 1249
267 Ga0495647_0085429 3300046681 Bacteria 1286
268 Ga0495670_0149832 3300046691 Bacteria 1223
269 Ga0495636_0007759 3300047318 Bacteria 4224
270 Ga0495683_0013973 3300047323 Bacteria 4185
271 Ga0496100_0328942 3300048903 Bacteria 1150
272 Ga0496101_0132306 3300048904 Bacteria 1895
273 Ga0496102_0143548 3300048905 Bacteria 2239
274 Ga0496104_0285670 3300048907 Bacteria 1562
275 Ga0496104_0356698 3300048907 Bacteria 1375
276 Ga0496105_0077329 3300048908 Bacteria 2748
277 Ga0496106_0110576 3300048909 Bacteria 2139
278 Ga0496106_0321474 3300048909 Bacteria 1242
279 Ga0496107_0222958 3300048910 Bacteria 1403
280 Ga0496108_0017258 3300048911 Bacteria 5904
281 Ga0496109_0021674 3300048912 Bacteria 5685
282 Ga0496109_0096824 3300048912 Bacteria 2734
283 Ga0496110_0241860 3300048913 Bacteria 1642
284 Ga0496112_0002094 3300048915 Bacteria 15837
285 Ga0496113_0089248 3300048916 Bacteria 2372
286 Ga0496116_0061929 3300048919 Bacteria 2419
287 Ga0496119_0015611 3300048922 Bacteria 5832
288 Ga0496121_0078638 3300048924 Bacteria 2621
289 Ga0496125_0034356 3300048928 Bacteria 4471
290 Ga0496125_0040419 3300048928 Bacteria 4002
291 Ga0496126_0026642 3300048929 Bacteria 5539
292 Ga0496126_0208889 3300048929 Bacteria 1644
293 Ga0501032_0011499 3300049569 Bacteria 6358
294 Ga0501033_0001190 3300049570 Bacteria 23502
295 Ga0501036_0035274 3300049572 Bacteria 4232
296 Ga0501037_0004803 3300049573 Bacteria 9822
297 Ga0501037_0166145 3300049573 Bacteria 1571
298 Ga0501038_0012143 3300049574 Bacteria 7866
299 Ga0501038_0016946 3300049574 Bacteria 6592
300 Ga0501039_0017875 3300049575 Bacteria 5439
301 Ga0501039_0139906 3300049575 Unclassified 1901
302 Ga0501046_0011113 3300049580 Bacteria 7710
303 Ga0501035_0014485 3300049822 Bacteria 7278
304 Ga0501044_0013296 3300049823 Bacteria 8910
305 nmdc:mga03n38_2842_c1 3300050490 Bacteria 5449
306 nmdc:mga0yw44_115193_c2 3300050492 Bacteria 1391
307 nmdc:mga0k408_18901_c1 3300050493 Bacteria 3847
308 nmdc:mga06z11_11035_c1 3300050494 Bacteria 3877
309 nmdc:mga06z11_22802_c1 3300050494 Bacteria 2930
310 nmdc:mga06z11_27429_c1 3300050494 Bacteria 2723
311 nmdc:mga04h51_42654_c1 3300050495 Bacteria 1489
312 nmdc:mga07m45_60444_c1 3300050496 Bacteria 2145
313 nmdc:mga07m45_8718_c1 3300050496 Bacteria 5224
314 nmdc:mga0sz30_10216_c1 3300050516 Bacteria 3593
315 Ga0500643_003274 3300053087 Bacteria 7881
316 Ga0500643_010315 3300053087 Bacteria 3490
317 Ga0500641_0005591 3300053096 Bacteria 4451
318 Ga0500641_0017892 3300053096 Bacteria 2658
319 Ga0500554_013201 3300053102 Bacteria 2099
320 Ga0500595_003343 3300053119 Bacteria 7531
321 Ga0500658_0054626 3300053134 Bacteria 1642
322 Ga0500603_000601 3300053150 Bacteria 8954
323 Ga0500645_007510 3300053730 Bacteria 3788
324 Ga0500609_002715 3300053731 Bacteria 2521

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014326 Ga0157380_10596251 Ga0157380_105962511 274
2 3300026041 Ga0207639_10269039 Ga0207639_102690392 278
3 3300014326 Ga0157380_10621033 Ga0157380_106210331 306
4 iso_pu_bacteria 2728368998 2728748047 307
5 iso_pu_bacteria 2908739725 2908746821 309
6 3300048903 Ga0496100_0328942 Ga0496100_0328942_95_1039 312
7 3300005435 Ga0070714_100422806 Ga0070714_1004228061 315
8 3300026088 Ga0207641_10120907 Ga0207641_101209072 315
9 iso_pu_bacteria 2524023228 2524539898 317
10 iso_pu_bacteria 8006933436 8006936886 317
11 iso_pu_bacteria 8006973647 8006976856 317
12 iso_pu_bacteria 2935630451 2935632572 318
13 iso_pu_bacteria 2941507105 2941508764 318
14 iso_pu_bacteria 2941515067 2941516594 318
15 iso_pu_bacteria 2941523033 2941524390 318
16 3300006353 Ga0075370_10074262 Ga0075370_100742623 319
17 3300025297 Ga0209758_1017704 Ga0209758_10177043 319
18 3300049575 Ga0501039_0139906 Ga0501039_0139906_364_1347 319
19 3300053087 Ga0500643_003274 Ga0500643_003274_6199_7215 319
20 3300003215 JGI25153J46596_10004919 JGI25153J46596_100049192 320
21 3300005548 Ga0070665_100038083 Ga0070665_1000380832 321
22 3300005548 Ga0070665_100430939 Ga0070665_1004309392 321
23 3300006048 Ga0075363_100085455 Ga0075363_1000854552 321
24 3300006178 Ga0075367_10088520 Ga0075367_100885202 321
25 3300009174 Ga0105241_10430746 Ga0105241_104307461 321
26 3300009177 Ga0105248_10011607 Ga0105248_100116073 321
27 3300014745 Ga0157377_10002840 Ga0157377_100028408 321
28 3300028379 Ga0268266_10056532 Ga0268266_100565324 321
29 3300050490 nmdc:mga03n38_2842_c1 nmdc:mga03n38_2842_c1_3915_4955 321
30 3300050494 nmdc:mga06z11_11035_c1 nmdc:mga06z11_11035_c1_1708_2748 321
31 3300050496 nmdc:mga07m45_8718_c1 nmdc:mga07m45_8718_c1_680_1720 321
32 iso_pu_bacteria 2791355197 2793067106 321
33 iso_pu_bacteria 2885374607 2885381393 321
34 iso_pu_bacteria 2906610324 2906614354 321
35 3300025919 Ga0207657_10153379 Ga0207657_101533793 323
36 3300048907 Ga0496104_0356698 Ga0496104_0356698_16_990 323
37 iso_pu_bacteria 2874590934 2874598551 323
38 iso_pu_bacteria 2874645413 2874652004 323
39 iso_pu_bacteria 2876771140 2876778589 323
40 iso_pu_bacteria 2876818435 2876823394 323
41 iso_pu_bacteria 2879074833 2879082382 323
42 3300005330 Ga0070690_100134513 Ga0070690_1001345131 325
43 3300005334 Ga0068869_100126635 Ga0068869_1001266352 325
44 3300005338 Ga0068868_100035129 Ga0068868_1000351293 325
45 3300005842 Ga0068858_100226339 Ga0068858_1002263392 325
46 3300006237 Ga0097621_100126539 Ga0097621_1001265393 325
47 3300006358 Ga0068871_100106095 Ga0068871_1001060952 325
48 3300009098 Ga0105245_10006498 Ga0105245_100064989 325
49 3300009176 Ga0105242_10416934 Ga0105242_104169341 325
50 3300009177 Ga0105248_10200414 Ga0105248_102004142 325
51 3300010375 Ga0105239_10149889 Ga0105239_101498892 325
52 3300013105 Ga0157369_10284214 Ga0157369_102842142 325
53 3300013297 Ga0157378_10074668 Ga0157378_100746683 325
54 3300025927 Ga0207687_10004146 Ga0207687_100041463 325
55 3300025941 Ga0207711_10244754 Ga0207711_102447542 325
56 3300026023 Ga0207677_10096674 Ga0207677_100966742 325
57 3300026095 Ga0207676_10182675 Ga0207676_101826752 325
58 3300031616 Ga0307508_10026742 Ga0307508_100267425 325
59 iso_pu_bacteria 2507262055 2507507434 325
60 iso_pu_bacteria 2508501042 2508692911 325
61 iso_pu_bacteria 2513237101 2513696480 325
62 iso_pu_bacteria 2513237161 2514011688 325
63 iso_pu_bacteria 2515154112 2515626298 325
64 iso_pu_bacteria 2721755755 2723842986 325
65 iso_pu_bacteria 2791355199 2793082459 325
66 iso_pu_bacteria 2802429603 2805920605 325
67 iso_pu_bacteria 2824671348 2824675229 325
68 iso_pu_bacteria 2824687955 2824690023 325
69 iso_pu_bacteria 2841941048 2841946365 325
70 iso_pu_bacteria 2841974524 2841978453 325
71 iso_pu_bacteria 2874604998 2874606359 325
72 iso_pu_bacteria 2876808645 2876809328 325
73 iso_pu_bacteria 2879110137 2879118132 325
74 iso_pu_bacteria 2889033259 2889033717 325
75 iso_pu_bacteria 2922361189 2922367075 325
76 iso_pu_bacteria 2922386360 2922390144 325
77 iso_pu_bacteria 2935608549 2935610062 325
78 iso_pu_bacteria 2935648319 2935656329 325
79 iso_pu_bacteria 2935656913 2935660115 325
80 iso_pu_bacteria 2935819856 2935823222 325
81 iso_pu_bacteria 2935847175 2935848804 325
82 iso_pu_bacteria 2935908558 2935909396 325
83 iso_pu_bacteria 2935916978 2935917118 325
84 iso_pu_bacteria 2935926038 2935926877 325
85 iso_pu_bacteria 2935934488 2935937279 325
86 iso_pu_bacteria 2935942939 2935944418 325
87 iso_pu_bacteria 2935951376 2935952855 325
88 iso_pu_bacteria 2935967501 2935969695 325
89 iso_pu_bacteria 2935975950 2935976303 325
90 iso_pu_bacteria 2936011229 2936014531 325
91 iso_pu_bacteria 2936019824 2936027802 325
92 iso_pu_bacteria 2936028420 2936031272 325
93 iso_pu_bacteria 2936046547 2936049637 325
94 iso_pu_bacteria 2936055302 2936061147 325
95 iso_pu_bacteria 8006964411 8006966616 325
96 iso_pu_bacteria 8006994254 8006997927 325
97 iso_pu_bacteria 8016630954 8016638919 325
98 iso_pu_bacteria 8019659431 8019660932 325
99 iso_pu_bacteria 8019687851 8019691311 325
100 iso_pu_bacteria 8056673599 8056674955 325
101 3300005364 Ga0070673_100215203 Ga0070673_1002152032 326
102 3300005456 Ga0070678_100354912 Ga0070678_1003549121 326
103 3300025941 Ga0207711_10022648 Ga0207711_100226482 326
104 3300026088 Ga0207641_10179624 Ga0207641_101796242 326
105 3300026121 Ga0207683_10022269 Ga0207683_100222695 326
106 3300031730 Ga0307516_10050029 Ga0307516_100500295 326
107 3300048910 Ga0496107_0222958 Ga0496107_0222958_217_1248 326
108 iso_pu_bacteria 2513237102 2513700673 326
109 iso_pu_bacteria 2617270741 2617372962 326
110 iso_pu_bacteria 2824617872 2824622011 326
111 iso_pu_bacteria 2824626560 2824629275 326
112 iso_pu_bacteria 2824635225 2824639192 326
113 iso_pu_bacteria 2824644064 2824651991 326
114 iso_pu_bacteria 2824714736 2824721604 326
115 iso_pu_bacteria 2824723954 2824728472 326
116 iso_pu_bacteria 2824732956 2824735634 326
117 iso_pu_bacteria 2824746037 2824752168 326
118 iso_pu_bacteria 2908775508 2908781411 326
119 iso_pu_bacteria 8006984368 8006989460 326
120 3300005336 Ga0070680_100291688 Ga0070680_1002916881 327
121 3300025917 Ga0207660_10135124 Ga0207660_101351242 327
122 3300049569 Ga0501032_0011499 Ga0501032_0011499_1796_2818 327
123 3300049570 Ga0501033_0001190 Ga0501033_0001190_6250_7272 327
124 3300049572 Ga0501036_0035274 Ga0501036_0035274_31_1053 327
125 3300049573 Ga0501037_0004803 Ga0501037_0004803_505_1527 327
126 3300049573 Ga0501037_0166145 Ga0501037_0166145_195_1217 327
127 3300049574 Ga0501038_0012143 Ga0501038_0012143_1706_2728 327
128 3300049574 Ga0501038_0016946 Ga0501038_0016946_3774_4796 327
129 3300049575 Ga0501039_0017875 Ga0501039_0017875_1429_2451 327
130 3300049580 Ga0501046_0011113 Ga0501046_0011113_6284_7306 327
131 3300049822 Ga0501035_0014485 Ga0501035_0014485_667_1689 327
132 3300049823 Ga0501044_0013296 Ga0501044_0013296_1729_2751 327
133 3300005339 Ga0070660_100212270 Ga0070660_1002122702 328
134 3300005366 Ga0070659_100024567 Ga0070659_1000245674 328
135 3300005563 Ga0068855_100041998 Ga0068855_1000419984 328
136 3300005577 Ga0068857_100119248 Ga0068857_1001192482 328
137 3300005614 Ga0068856_100066905 Ga0068856_1000669052 328
138 3300009098 Ga0105245_10193316 Ga0105245_101933162 328
139 3300010375 Ga0105239_10792987 Ga0105239_107929871 328
140 3300011119 Ga0105246_10186953 Ga0105246_101869532 328
141 3300017792 Ga0163161_10239489 Ga0163161_102394892 328
142 3300025917 Ga0207660_10211036 Ga0207660_102110362 328
143 3300025929 Ga0207664_10258020 Ga0207664_102580202 328
144 3300025932 Ga0207690_10020007 Ga0207690_100200073 328
145 3300025937 Ga0207669_10138429 Ga0207669_101384292 328
146 3300026078 Ga0207702_10153258 Ga0207702_101532582 328
147 3300026116 Ga0207674_10051710 Ga0207674_100517102 328
148 3300026142 Ga0207698_10092240 Ga0207698_100922402 328
149 3300028786 Ga0307517_10000053 Ga0307517_10000053147 328
150 3300028794 Ga0307515_10015192 Ga0307515_100151926 328
151 3300031235 Ga0265330_10007891 Ga0265330_100078915 328
152 3300031456 Ga0307513_10154115 Ga0307513_101541153 328
153 3300037068 Ga0373925_0114935 Ga0373925_0114935_860_1867 328
154 3300003659 JGI25404J52841_10016341 JGI25404J52841_100163411 329
155 3300005262 Ga0065165_1001230 Ga0065165_10012309 329
156 3300005347 Ga0070668_100007192 Ga0070668_1000071921 329
157 3300005353 Ga0070669_100143395 Ga0070669_1001433951 329
158 3300005355 Ga0070671_100003082 Ga0070671_10000308213 329
159 3300005455 Ga0070663_100013037 Ga0070663_1000130374 329
160 3300005456 Ga0070678_100023944 Ga0070678_1000239446 329
161 3300005457 Ga0070662_100132445 Ga0070662_1001324451 329
162 3300005536 Ga0070697_100102027 Ga0070697_1001020272 329
163 3300005548 Ga0070665_100216739 Ga0070665_1002167392 329
164 3300005564 Ga0070664_100282898 Ga0070664_1002828981 329
165 3300005577 Ga0068857_100218669 Ga0068857_1002186692 329
166 3300005937 Ga0081455_10012953 Ga0081455_100129533 329
167 3300005981 Ga0081538_10030517 Ga0081538_100305172 329
168 3300005983 Ga0081540_1004331 Ga0081540_10043314 329
169 3300005985 Ga0081539_10043556 Ga0081539_100435562 329
170 3300006051 Ga0075364_10021649 Ga0075364_100216493 329
171 3300006178 Ga0075367_10014293 Ga0075367_100142933 329
172 3300006195 Ga0075366_10017013 Ga0075366_100170134 329
173 3300006195 Ga0075366_10047147 Ga0075366_100471473 329
174 3300007265 Ga0099794_10071694 Ga0099794_100716942 329
175 3300007265 Ga0099794_10121768 Ga0099794_101217682 329
176 3300009093 Ga0105240_10106394 Ga0105240_101063943 329
177 3300009098 Ga0105245_10119392 Ga0105245_101193922 329
178 3300009101 Ga0105247_10197996 Ga0105247_101979961 329
179 3300009147 Ga0114129_10268236 Ga0114129_102682361 329
180 3300009148 Ga0105243_10114274 Ga0105243_101142742 329
181 3300009174 Ga0105241_10110078 Ga0105241_101100782 329
182 3300009177 Ga0105248_10033354 Ga0105248_100333546 329
183 3300009545 Ga0105237_10020174 Ga0105237_100201746 329
184 3300009551 Ga0105238_10211476 Ga0105238_102114761 329
185 3300010375 Ga0105239_10011911 Ga0105239_100119114 329
186 3300011119 Ga0105246_10025300 Ga0105246_100253003 329
187 3300014325 Ga0163163_10019111 Ga0163163_100191117 329
188 3300014968 Ga0157379_10014951 Ga0157379_100149513 329
189 3300014968 Ga0157379_10071213 Ga0157379_100712133 329
190 3300021321 Ga0214542_1001925 Ga0214542_100192513 329
191 3300021324 Ga0214545_1000003 Ga0214545_1000003236 329
192 3300021327 Ga0214543_1000002 Ga0214543_1000002530 329
193 3300025297 Ga0209758_1000120 Ga0209758_100012060 329
194 3300025302 Ga0207426_1000328 Ga0207426_100032830 329
195 3300025304 Ga0209257_1012853 Ga0209257_10128533 329
196 3300025315 Ga0207697_10009200 Ga0207697_100092005 329
197 3300025904 Ga0207647_10003457 Ga0207647_1000345712 329
198 3300025911 Ga0207654_10141008 Ga0207654_101410082 329
199 3300025923 Ga0207681_10308575 Ga0207681_103085751 329
200 3300025933 Ga0207706_10063340 Ga0207706_100633402 329
201 3300025941 Ga0207711_10150371 Ga0207711_101503712 329
202 3300025986 Ga0207658_10251492 Ga0207658_102514922 329
203 3300026067 Ga0207678_10024274 Ga0207678_100242744 329
204 3300026116 Ga0207674_10064093 Ga0207674_100640932 329
205 3300027671 Ga0209588_1000614 Ga0209588_10006145 329
206 3300027671 Ga0209588_1006071 Ga0209588_10060715 329
207 3300027671 Ga0209588_1058268 Ga0209588_10582681 329
208 3300027866 Ga0209813_10035731 Ga0209813_100357312 329
209 3300033180 Ga0307510_10017231 Ga0307510_100172313 329
210 3300041460 Ga0451802_1046101 Ga0451802_1046101_162_1154 329
211 3300046455 Ga0495603_0055879 Ga0495603_0055879_265_1263 329
212 3300046474 Ga0495605_0063075 Ga0495605_0063075_377_1411 329
213 3300046512 Ga0495610_0076502 Ga0495610_0076502_196_1230 329
214 3300046513 Ga0495616_0136732 Ga0495616_0136732_46_1080 329
215 3300046523 Ga0495644_0015686 Ga0495644_0015686_785_1777 329
216 3300046537 Ga0495598_0015792 Ga0495598_0015792_818_1810 329
217 3300046542 Ga0495597_0014260 Ga0495597_0014260_2548_3582 329
218 3300046615 Ga0495656_0004019 Ga0495656_0004019_2245_3237 329
219 3300046664 Ga0495659_0012448 Ga0495659_0012448_488_1480 329
220 3300047318 Ga0495636_0007759 Ga0495636_0007759_1709_2701 329
221 3300047323 Ga0495683_0013973 Ga0495683_0013973_3104_4138 329
222 3300048904 Ga0496101_0132306 Ga0496101_0132306_407_1441 329
223 3300048905 Ga0496102_0143548 Ga0496102_0143548_364_1398 329
224 3300048907 Ga0496104_0285670 Ga0496104_0285670_279_1313 329
225 3300048908 Ga0496105_0077329 Ga0496105_0077329_1635_2669 329
226 3300048909 Ga0496106_0321474 Ga0496106_0321474_144_1178 329
227 3300048911 Ga0496108_0017258 Ga0496108_0017258_3515_4549 329
228 3300048912 Ga0496109_0021674 Ga0496109_0021674_57_1091 329
229 3300048912 Ga0496109_0096824 Ga0496109_0096824_1305_2303 329
230 3300048913 Ga0496110_0241860 Ga0496110_0241860_377_1411 329
231 3300048915 Ga0496112_0002094 Ga0496112_0002094_13947_14981 329
232 3300048916 Ga0496113_0089248 Ga0496113_0089248_1165_2199 329
233 3300048919 Ga0496116_0061929 Ga0496116_0061929_1336_2370 329
234 3300048922 Ga0496119_0015611 Ga0496119_0015611_429_1463 329
235 3300048928 Ga0496125_0034356 Ga0496125_0034356_2070_3104 329
236 3300050493 nmdc:mga0k408_18901_c1 nmdc:mga0k408_18901_c1_2840_3832 329
237 3300050494 nmdc:mga06z11_22802_c1 nmdc:mga06z11_22802_c1_261_1253 329
238 3300050494 nmdc:mga06z11_27429_c1 nmdc:mga06z11_27429_c1_293_1327 329
239 3300050495 nmdc:mga04h51_42654_c1 nmdc:mga04h51_42654_c1_80_1114 329
240 3300050496 nmdc:mga07m45_60444_c1 nmdc:mga07m45_60444_c1_941_1975 329
241 3300050516 nmdc:mga0sz30_10216_c1 nmdc:mga0sz30_10216_c1_293_1327 329
242 3300053102 Ga0500554_013201 Ga0500554_013201_858_1856 329
243 3300053150 Ga0500603_000601 Ga0500603_000601_1074_2072 329
244 3300053730 Ga0500645_007510 Ga0500645_007510_2622_3614 329
245 3300003203 JGI25406J46586_10003824 JGI25406J46586_100038242 330
246 3300003659 JGI25404J52841_10001188 JGI25404J52841_100011882 330
247 3300003659 JGI25404J52841_10005145 JGI25404J52841_100051452 330
248 3300003659 JGI25404J52841_10018301 JGI25404J52841_100183012 330
249 3300005334 Ga0068869_100041021 Ga0068869_1000410213 330
250 3300005338 Ga0068868_100058744 Ga0068868_1000587444 330
251 3300005339 Ga0070660_100235009 Ga0070660_1002350092 330
252 3300005340 Ga0070689_100432873 Ga0070689_1004328731 330
253 3300005343 Ga0070687_100038286 Ga0070687_1000382861 330
254 3300005343 Ga0070687_100262475 Ga0070687_1002624751 330
255 3300005347 Ga0070668_100043305 Ga0070668_1000433054 330
256 3300005347 Ga0070668_100055140 Ga0070668_1000551402 330
257 3300005347 Ga0070668_100063510 Ga0070668_1000635102 330
258 3300005356 Ga0070674_100084720 Ga0070674_1000847202 330
259 3300005367 Ga0070667_100072674 Ga0070667_1000726743 330
260 3300005441 Ga0070700_100164733 Ga0070700_1001647331 330
261 3300005441 Ga0070700_100200710 Ga0070700_1002007101 330
262 3300005444 Ga0070694_100079884 Ga0070694_1000798842 330
263 3300005455 Ga0070663_100006693 Ga0070663_1000066935 330
264 3300005455 Ga0070663_100127042 Ga0070663_1001270422 330
265 3300005456 Ga0070678_100078023 Ga0070678_1000780233 330
266 3300005457 Ga0070662_100089794 Ga0070662_1000897942 330
267 3300005459 Ga0068867_100305805 Ga0068867_1003058052 330
268 3300005466 Ga0070685_10083909 Ga0070685_100839091 330
269 3300005471 Ga0070698_100159702 Ga0070698_1001597022 330
270 3300005518 Ga0070699_100068026 Ga0070699_1000680265 330
271 3300005543 Ga0070672_100029567 Ga0070672_1000295674 330
272 3300005548 Ga0070665_100030244 Ga0070665_1000302444 330
273 3300005548 Ga0070665_100119765 Ga0070665_1001197652 330
274 3300005548 Ga0070665_100125248 Ga0070665_1001252481 330
275 3300005549 Ga0070704_100325343 Ga0070704_1003253431 330
276 3300005614 Ga0068856_100033390 Ga0068856_1000333902 330
277 3300005615 Ga0070702_100016652 Ga0070702_1000166524 330
278 3300005616 Ga0068852_100438008 Ga0068852_1004380082 330
279 3300005617 Ga0068859_100026003 Ga0068859_1000260034 330
280 3300005617 Ga0068859_100068312 Ga0068859_1000683124 330
281 3300005719 Ga0068861_100091001 Ga0068861_1000910013 330
282 3300005841 Ga0068863_100135958 Ga0068863_1001359582 330
283 3300005842 Ga0068858_100057906 Ga0068858_1000579064 330
284 3300005843 Ga0068860_100064619 Ga0068860_1000646193 330
285 3300005843 Ga0068860_100077872 Ga0068860_1000778722 330
286 3300005844 Ga0068862_100081382 Ga0068862_1000813823 330
287 3300005844 Ga0068862_100113705 Ga0068862_1001137052 330
288 3300005844 Ga0068862_100288000 Ga0068862_1002880002 330
289 3300005937 Ga0081455_10006836 Ga0081455_1000683611 330
290 3300005983 Ga0081540_1000914 Ga0081540_10009149 330
291 3300005983 Ga0081540_1012457 Ga0081540_10124573 330
292 3300005983 Ga0081540_1014058 Ga0081540_10140582 330
293 3300005985 Ga0081539_10001660 Ga0081539_1000166020 330
294 3300005985 Ga0081539_10021290 Ga0081539_100212902 330
295 3300006038 Ga0075365_10036550 Ga0075365_100365502 330
296 3300006178 Ga0075367_10205122 Ga0075367_102051221 330
297 3300006881 Ga0068865_100004347 Ga0068865_1000043477 330
298 3300006931 Ga0097620_100026006 Ga0097620_1000260064 330
299 3300006931 Ga0097620_100068312 Ga0097620_1000683122 330
300 3300009098 Ga0105245_10062313 Ga0105245_100623132 330
301 3300009101 Ga0105247_10040165 Ga0105247_100401653 330
302 3300009101 Ga0105247_10189073 Ga0105247_101890732 330
303 3300009148 Ga0105243_10100635 Ga0105243_101006352 330
304 3300009148 Ga0105243_10111755 Ga0105243_101117552 330
305 3300009174 Ga0105241_10116663 Ga0105241_101166632 330
306 3300009176 Ga0105242_10057151 Ga0105242_100571512 330
307 3300009177 Ga0105248_10152289 Ga0105248_101522893 330
308 3300009551 Ga0105238_10273315 Ga0105238_102733152 330
309 3300010375 Ga0105239_10113591 Ga0105239_101135912 330
310 3300010375 Ga0105239_10117394 Ga0105239_101173943 330
311 3300011119 Ga0105246_10103395 Ga0105246_101033952 330
312 3300013297 Ga0157378_10209402 Ga0157378_102094022 330
313 3300014326 Ga0157380_10054606 Ga0157380_100546063 330
314 3300014968 Ga0157379_10157229 Ga0157379_101572291 330
315 3300014968 Ga0157379_10251602 Ga0157379_102516022 330
316 3300014969 Ga0157376_10332734 Ga0157376_103327342 330
317 3300025315 Ga0207697_10110186 Ga0207697_101101861 330
318 3300025901 Ga0207688_10039619 Ga0207688_100396192 330
319 3300025901 Ga0207688_10102259 Ga0207688_101022592 330
320 3300025907 Ga0207645_10139379 Ga0207645_101393792 330
321 3300025907 Ga0207645_10175317 Ga0207645_101753172 330
322 3300025914 Ga0207671_10028442 Ga0207671_100284422 330
323 3300025919 Ga0207657_10101393 Ga0207657_101013932 330
324 3300025919 Ga0207657_10162309 Ga0207657_101623092 330
325 3300025920 Ga0207649_10185933 Ga0207649_101859331 330
326 3300025923 Ga0207681_10175748 Ga0207681_101757481 330
327 3300025927 Ga0207687_10136261 Ga0207687_101362611 330
328 3300025931 Ga0207644_10128538 Ga0207644_101285382 330
329 3300025933 Ga0207706_10027152 Ga0207706_100271524 330
330 3300025933 Ga0207706_10029379 Ga0207706_100293793 330
331 3300025936 Ga0207670_10056924 Ga0207670_100569242 330
332 3300025936 Ga0207670_10272827 Ga0207670_102728271 330
333 3300025940 Ga0207691_10013516 Ga0207691_100135166 330
334 3300025941 Ga0207711_10120907 Ga0207711_101209073 330
335 3300025942 Ga0207689_10012148 Ga0207689_100121484 330
336 3300025942 Ga0207689_10050552 Ga0207689_100505523 330
337 3300025949 Ga0207667_10041493 Ga0207667_100414933 330
338 3300025972 Ga0207668_10147624 Ga0207668_101476242 330
339 3300025972 Ga0207668_10246076 Ga0207668_102460762 330
340 3300025986 Ga0207658_10096921 Ga0207658_100969212 330
341 3300026023 Ga0207677_10027440 Ga0207677_100274403 330
342 3300026023 Ga0207677_10046125 Ga0207677_100461251 330
343 3300026035 Ga0207703_10137810 Ga0207703_101378102 330
344 3300026067 Ga0207678_10084356 Ga0207678_100843563 330
345 3300026075 Ga0207708_10060639 Ga0207708_100606392 330
346 3300026075 Ga0207708_10088801 Ga0207708_100888012 330
347 3300026078 Ga0207702_10032268 Ga0207702_100322684 330
348 3300026088 Ga0207641_10124522 Ga0207641_101245222 330
349 3300026089 Ga0207648_10010726 Ga0207648_100107266 330
350 3300026089 Ga0207648_10301611 Ga0207648_103016112 330
351 3300026118 Ga0207675_100031707 Ga0207675_1000317073 330
352 3300026121 Ga0207683_10063932 Ga0207683_100639323 330
353 3300026121 Ga0207683_10250673 Ga0207683_102506732 330
354 3300026142 Ga0207698_10521765 Ga0207698_105217651 330
355 3300028379 Ga0268266_10089106 Ga0268266_100891061 330
356 3300028379 Ga0268266_10536066 Ga0268266_105360661 330
357 3300028380 Ga0268265_10161370 Ga0268265_101613702 330
358 3300028381 Ga0268264_10054016 Ga0268264_100540163 330
359 3300028786 Ga0307517_10057283 Ga0307517_100572833 330
360 3300031616 Ga0307508_10255227 Ga0307508_102552272 330
361 3300031731 Ga0307405_10022480 Ga0307405_100224801 330
362 3300031852 Ga0307410_10059473 Ga0307410_100594732 330
363 3300031911 Ga0307412_10031710 Ga0307412_100317103 330
364 3300032002 Ga0307416_100204672 Ga0307416_1002046722 330
365 3300032005 Ga0307411_10427169 Ga0307411_104271691 330
366 3300032126 Ga0307415_100270202 Ga0307415_1002702022 330
367 3300033180 Ga0307510_10016828 Ga0307510_100168285 330
368 3300046457 Ga0495590_0063162 Ga0495590_0063162_260_1255 330
369 3300046460 Ga0495638_0046503 Ga0495638_0046503_1379_2374 330
370 3300046474 Ga0495605_0059071 Ga0495605_0059071_599_1594 330
371 3300046492 Ga0495585_0098018 Ga0495585_0098018_221_1216 330
372 3300046500 Ga0495596_0047100 Ga0495596_0047100_374_1372 330
373 3300046522 Ga0495643_0073552 Ga0495643_0073552_773_1771 330
374 3300046557 Ga0495622_0107883 Ga0495622_0107883_68_1063 330
375 3300046558 Ga0495633_0018822 Ga0495633_0018822_1203_2198 330
376 3300046558 Ga0495633_0070981 Ga0495633_0070981_587_1582 330
377 3300046616 Ga0495668_0033854 Ga0495668_0033854_734_1729 330
378 3300046660 Ga0495625_0105934 Ga0495625_0105934_780_1775 330
379 3300046663 Ga0495635_0166676 Ga0495635_0166676_149_1144 330
380 3300046664 Ga0495659_0012271 Ga0495659_0012271_187_1182 330
381 3300046665 Ga0495661_0152227 Ga0495661_0152227_117_1112 330
382 3300046681 Ga0495647_0085429 Ga0495647_0085429_71_1066 330
383 3300046691 Ga0495670_0149832 Ga0495670_0149832_159_1154 330
384 3300048909 Ga0496106_0110576 Ga0496106_0110576_783_1778 330
385 3300048924 Ga0496121_0078638 Ga0496121_0078638_669_1664 330
386 3300048928 Ga0496125_0040419 Ga0496125_0040419_365_1360 330
387 3300048929 Ga0496126_0026642 Ga0496126_0026642_514_1509 330
388 3300048929 Ga0496126_0208889 Ga0496126_0208889_566_1561 330
389 3300050492 nmdc:mga0yw44_115193_c2 nmdc:mga0yw44_115193_c2_20_1015 330
390 3300053087 Ga0500643_010315 Ga0500643_010315_1863_2858 330
391 3300053096 Ga0500641_0005591 Ga0500641_0005591_2687_3682 330
392 3300053096 Ga0500641_0017892 Ga0500641_0017892_1011_2018 330
393 3300053119 Ga0500595_003343 Ga0500595_003343_267_1262 330
394 3300053134 Ga0500658_0054626 Ga0500658_0054626_592_1587 330
395 3300053731 Ga0500609_002715 Ga0500609_002715_991_1986 330

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03734

YkuD

L,D-transpeptidase catalytic domain

189

322

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ebz-assembly1.cif.gz_A crystal structure of the ectodomain of a receptor like kinase 0.9272 144 178
5ao7-assembly1.cif.gz_A crystal structure of sltb3 from pseudomonas aeruginosa in complex with nag-anhnam-pentapeptide 0.8975 46 98
6xwe-assembly1.cif.gz_A crystal structure of lyk3 ectodomain 0.8831 144 178
8da2-assembly1.cif.gz_A acinetobacter baumannii l,d-transpeptidase 0.8525 21 323
5k2l-assembly1.cif.gz_A crystal structure of lysm domain from volvox carteri chitinase 0.8459 144 174
ID Description Score Start End Superfamily
4a1iC02 Mainly Beta;Beta Barrel;L,D-transpeptidase catalytic domain-like;L,D-transpeptidase catalytic domain-like 0.9054 184 322 2.40.440.10
4a1iC02 Mainly Beta;Beta Barrel;L,D-transpeptidase catalytic domain-like;L,D-transpeptidase catalytic domain-like 0.8831 184 322 2.40.440.10
5k2lA00 Alpha Beta;Roll;Membrane-bound Lytic Murein Transglycosylase D; Chain A;LysM domain 0.8455 144 174 3.10.350.10
6iywC02 Mainly Beta;Beta Barrel;L,D-transpeptidase catalytic domain-like;L,D-transpeptidase catalytic domain-like 0.8133 191 322 2.40.440.10
3bkvA01 Mainly Alpha;Orthogonal Bundle;Muramoyl-pentapeptide Carboxypeptidase; domain 1;PGBD-like superfamily/PGBD 0.8114 36 106 1.10.101.10
ID Description Score Start End GO Terms
AF-A0A529SYZ0-F1-model_v4 Murein L,D-transpeptidase 0.9709 74 322 GO:0005576
GO:0008360
GO:0016740
GO:0018104
GO:0071555
GO:0071972
AF-A0A536VYR2-F1-model_v4 Murein L,D-transpeptidase 0.9691 40 322 GO:0005576
GO:0008360
GO:0016740
GO:0018104
GO:0071555
GO:0071972
AF-A0A2V8M8A6-F1-model_v4 Murein L,D-transpeptidase 0.9679 46 323 GO:0005576
GO:0008360
GO:0016740
GO:0018104
GO:0071555
GO:0071972
AF-A0A516IUV1-F1-model_v4 Murein L,D-transpeptidase 0.9651 46 322 GO:0005576
GO:0008360
GO:0016740
GO:0018104
GO:0071555
GO:0071972
AF-A0A529SYZ0-F1-model_v4 Murein L,D-transpeptidase 0.9633 74 322 GO:0005576
GO:0008360
GO:0016740
GO:0018104
GO:0071555
GO:0071972

Feature Viewer

pLDDT pTM Quality
88.86 0.87 High
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Predicted Structure (AlphaFold2)

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