F432601

General Info

Members Datasets Scaffolds Average Seq Length
393 173 786 241

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10234923|Ga0157375_102349232
Length 265
Sequence VNRKIRYEARPLTAAAHLPKLTRVTAPSSDLAQVVLRPVRGHHAFEACVEQLATAIRLGVHPNGSTLPSERDLAERMHVSRATVREAITALRTAGMVETRRGRGGGSIVTYSPRRPRARAKAPPAETLATWLDSLAFRRIVEPGAVATAAAHDLTEKQRALLTAAYAGVSKASGSAAHRQADSRFHLAFASVTGSPSIIDAVTRVQATLHDMLLQIPVYDVNIAHSDRQHERILGAVLEGRPDRARQTMEEHCDDTAALLRGLLG

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
99 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
100 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
101 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
105 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
106 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
112 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
158 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
159 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
166 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
167 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
171 2643221615 Nocardioides sp. Root224 Isolate Unclassified
172 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
173 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.73
Metatranscriptomes 0.51
Isolates 0.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.34
Nodule 0
Rhizoplane 11.2
Rhizosphere 67.94
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10234923 3300013308 Bacteria 1992
2 JGI24740J21852_10005878 3300001979 Bacteria 5143
3 JGI24735J21928_10004432 3300002067 Bacteria 4722
4 rootL2_10131108 3300003322 Bacteria 1156
5 Ga0070658_10034073 3300005327 Bacteria 4097
6 Ga0070658_10158648 3300005327 Bacteria 1897
7 Ga0070658_10529680 3300005327 Bacteria 1019
8 Ga0070683_100001232 3300005329 Bacteria 19471
9 Ga0070683_100017715 3300005329 Bacteria 6294
10 Ga0070683_100137096 3300005329 Bacteria 2318
11 Ga0070683_100217457 3300005329 Bacteria 1816
12 Ga0070683_100228530 3300005329 Bacteria 1769
13 Ga0070683_100704368 3300005329 Bacteria 967
14 Ga0070680_100089840 3300005336 Bacteria 2542
15 Ga0070682_100008246 3300005337 Bacteria 5876
16 Ga0070682_100317542 3300005337 Bacteria 1149
17 Ga0070660_100015370 3300005339 Bacteria 5523
18 Ga0070660_100053245 3300005339 Bacteria 3121
19 Ga0070669_100575609 3300005353 Bacteria 941
20 Ga0070659_100070262 3300005366 Bacteria 2781
21 Ga0070659_100151542 3300005366 Bacteria 1892
22 Ga0070667_100243781 3300005367 Bacteria 1605
23 Ga0070667_100435479 3300005367 Bacteria 1197
24 Ga0070700_100017270 3300005441 Bacteria 4121
25 Ga0070663_100090703 3300005455 Bacteria 2264
26 Ga0070678_100296853 3300005456 Bacteria 1372
27 Ga0070678_100546580 3300005456 Bacteria 1028
28 Ga0070662_100276761 3300005457 Bacteria 1357
29 Ga0070685_10109421 3300005466 Bacteria 1700
30 Ga0070698_100001988 3300005471 Bacteria 22693
31 Ga0070684_100010016 3300005535 Bacteria 7493
32 Ga0070684_100037092 3300005535 Bacteria 4179
33 Ga0070684_100194064 3300005535 Bacteria 1849
34 Ga0070684_100535688 3300005535 Bacteria 1086
35 Ga0068853_100059851 3300005539 Bacteria 3290
36 Ga0070693_100044131 3300005547 Bacteria 2521
37 Ga0070665_100001502 3300005548 Bacteria 27146
38 Ga0068855_100545860 3300005563 Bacteria 1255
39 Ga0070664_100067841 3300005564 Bacteria 3049
40 Ga0070664_100552202 3300005564 Bacteria 1065
41 Ga0068857_100039719 3300005577 Bacteria 4170
42 Ga0070702_100131830 3300005615 Bacteria 1580
43 Ga0068852_100296737 3300005616 Bacteria 1563
44 Ga0068864_100162189 3300005618 Bacteria 2033
45 Ga0068861_100140885 3300005719 Bacteria 1968
46 Ga0068870_10138436 3300005840 Bacteria 1422
47 Ga0068858_100109253 3300005842 Bacteria 2582
48 Ga0068860_100013790 3300005843 Bacteria 7924
49 Ga0081455_10068032 3300005937 Bacteria 2966
50 Ga0081539_10016728 3300005985 Bacteria 5209
51 Ga0075365_10000395 3300006038 Bacteria 15977
52 Ga0075365_10001285 3300006038 Bacteria 11170
53 Ga0075365_10010491 3300006038 Bacteria 5397
54 Ga0075365_10010698 3300006038 Bacteria 5359
55 Ga0075365_10039332 3300006038 Bacteria 3078
56 Ga0075365_10049602 3300006038 Bacteria 2766
57 Ga0075365_10052188 3300006038 Bacteria 2703
58 Ga0075365_10055419 3300006038 Bacteria 2631
59 Ga0075365_10089569 3300006038 Bacteria 2094
60 Ga0075365_10089709 3300006038 Bacteria 2093
61 Ga0075365_10124832 3300006038 Bacteria 1778
62 Ga0075365_10133118 3300006038 Bacteria 1721
63 Ga0075365_10163982 3300006038 Bacteria 1549
64 Ga0075365_10196214 3300006038 Bacteria 1413
65 Ga0075365_10202857 3300006038 Bacteria 1389
66 Ga0075365_10263308 3300006038 Bacteria 1212
67 Ga0075368_10000942 3300006042 Bacteria 9046
68 Ga0075368_10005362 3300006042 Bacteria 4407
69 Ga0075368_10135459 3300006042 Bacteria 1025
70 Ga0075363_100004211 3300006048 Bacteria 6249
71 Ga0075363_100006959 3300006048 Bacteria 5171
72 Ga0075363_100013941 3300006048 Bacteria 3913
73 Ga0075363_100065952 3300006048 Bacteria 1958
74 Ga0075363_100188810 3300006048 Bacteria 1175
75 Ga0075364_10018466 3300006051 Bacteria 4365
76 Ga0075364_10050626 3300006051 Bacteria 2712
77 Ga0075364_10054742 3300006051 Bacteria 2609
78 Ga0075364_10107282 3300006051 Bacteria 1861
79 Ga0075364_10169032 3300006051 Bacteria 1478
80 Ga0075362_10016163 3300006177 Bacteria 3051
81 Ga0075367_10006133 3300006178 Bacteria 6047
82 Ga0075367_10008287 3300006178 Bacteria 5381
83 Ga0075367_10031957 3300006178 Bacteria 3025
84 Ga0075367_10102287 3300006178 Bacteria 1752
85 Ga0075367_10351479 3300006178 Bacteria 930
86 Ga0075370_10007754 3300006353 Bacteria 5482
87 Ga0075370_10217181 3300006353 Bacteria 1129
88 Ga0075370_10253108 3300006353 Bacteria 1044
89 Ga0075370_10263204 3300006353 Bacteria 1023
90 Ga0075428_100433756 3300006844 Bacteria 1408
91 Ga0068865_100209527 3300006881 Bacteria 1518
92 Ga0068865_100306454 3300006881 Bacteria 1273
93 Ga0068865_100706202 3300006881 Bacteria 862
94 Ga0111539_10025612 3300009094 Bacteria 7229
95 Ga0105245_10004191 3300009098 Bacteria 12802
96 Ga0105245_10292730 3300009098 Bacteria 1595
97 Ga0105245_10713614 3300009098 Bacteria 1037
98 Ga0105248_10196433 3300009177 Bacteria 2273
99 Ga0105248_10236058 3300009177 Bacteria 2058
100 Ga0105248_10461527 3300009177 Bacteria 1432
101 Ga0105237_10079190 3300009545 Bacteria 3276
102 Ga0105249_10046879 3300009553 Bacteria 3935
103 Ga0105249_10192796 3300009553 Bacteria 1990
104 Ga0105249_10602578 3300009553 Bacteria 1153
105 Ga0105239_10001401 3300010375 Bacteria 32259
106 Ga0105239_10039937 3300010375 Bacteria 5140
107 Ga0105246_10380926 3300011119 Bacteria 1165
108 Ga0157369_10010249 3300013105 Bacteria 10695
109 Ga0163162_10008688 3300013306 Bacteria 9886
110 Ga0157372_10003488 3300013307 Bacteria 16951
111 Ga0157372_10892021 3300013307 Bacteria 1032
112 Ga0157375_10072659 3300013308 Bacteria 3457
113 Ga0157375_10264575 3300013308 Bacteria 1881
114 Ga0157375_10274373 3300013308 Bacteria 1848
115 Ga0157375_10567802 3300013308 Bacteria 1295
116 Ga0157375_10840988 3300013308 Bacteria 1065
117 Ga0163163_10030323 3300014325 Bacteria 5210
118 Ga0157380_10206030 3300014326 Bacteria 1749
119 Ga0182008_10041829 3300014497 Bacteria 2285
120 Ga0157379_10079948 3300014968 Bacteria 2928
121 Ga0157376_10377168 3300014969 Bacteria 1365
122 Ga0163161_10045039 3300017792 Bacteria 3180
123 Ga0206353_10723439 3300020082 Bacteria 2417
124 Ga0206353_11077275 3300020082 Bacteria 1294
125 Ga0207688_10129831 3300025901 Bacteria 1476
126 Ga0207688_10225216 3300025901 Bacteria 1131
127 Ga0207688_10319282 3300025901 Bacteria 953
128 Ga0207647_10022314 3300025904 Bacteria 4206
129 Ga0207647_10023348 3300025904 Bacteria 4090
130 Ga0207705_10087551 3300025909 Bacteria 2277
131 Ga0207705_10118044 3300025909 Bacteria 1966
132 Ga0207707_10176575 3300025912 Bacteria 1866
133 Ga0207662_10045159 3300025918 Bacteria 2604
134 Ga0207657_10018422 3300025919 Bacteria 6665
135 Ga0207657_10103024 3300025919 Bacteria 2366
136 Ga0207687_10011578 3300025927 Bacteria 5767
137 Ga0207687_10262596 3300025927 Bacteria 1377
138 Ga0207690_10022739 3300025932 Bacteria 3904
139 Ga0207690_10026631 3300025932 Bacteria 3642
140 Ga0207690_10421251 3300025932 Bacteria 1068
141 Ga0207669_10225092 3300025937 Bacteria 1380
142 Ga0207704_10069255 3300025938 Bacteria 2228
143 Ga0207711_10074985 3300025941 Bacteria 2943
144 Ga0207711_10591209 3300025941 Bacteria 1035
145 Ga0207661_10008301 3300025944 Bacteria 7420
146 Ga0207661_10050697 3300025944 Bacteria 3308
147 Ga0207661_10180475 3300025944 Bacteria 1844
148 Ga0207661_10554215 3300025944 Bacteria 1053
149 Ga0207679_10004736 3300025945 Bacteria 8469
150 Ga0207712_10076697 3300025961 Bacteria 2420
151 Ga0207658_10340335 3300025986 Bacteria 1304
152 Ga0207658_10462220 3300025986 Bacteria 1125
153 Ga0207703_10429641 3300026035 Bacteria 1230
154 Ga0207708_10014813 3300026075 Bacteria 5836
155 Ga0207708_10166166 3300026075 Bacteria 1745
156 Ga0207702_10089711 3300026078 Bacteria 2689
157 Ga0207676_10067745 3300026095 Bacteria 2852
158 Ga0207674_10046688 3300026116 Bacteria 4445
159 Ga0207675_100023030 3300026118 Bacteria 5793
160 Ga0207675_101131820 3300026118 Bacteria 803
161 Ga0207683_10330492 3300026121 Bacteria 1397
162 Ga0207683_10563790 3300026121 Bacteria 1053
163 Ga0207683_10809608 3300026121 Bacteria 869
164 Ga0207698_10022798 3300026142 Bacteria 4361
165 Ga0207698_10336555 3300026142 Bacteria 1420
166 Ga0209813_10002225 3300027866 Bacteria 4429
167 Ga0209813_10005452 3300027866 Bacteria 3089
168 Ga0207428_10106990 3300027907 Bacteria 2155
169 Ga0268266_10005197 3300028379 Bacteria 12253
170 Ga0268266_10067368 3300028379 Bacteria 3099
171 Ga0268265_10294488 3300028380 Bacteria 1458
172 Ga0268264_10001927 3300028381 Bacteria 18714
173 Ga0268264_10235606 3300028381 Bacteria 1693
174 Ga0307405_10019820 3300031731 Bacteria 3746
175 Ga0307405_10114188 3300031731 Bacteria 1835
176 Ga0307410_10333247 3300031852 Bacteria 1207
177 Ga0307412_10124030 3300031911 Bacteria 1865
178 Ga0307412_10597491 3300031911 Bacteria 934
179 Ga0307409_100075082 3300031995 Bacteria 2705
180 Ga0307409_100087769 3300031995 Bacteria 2536
181 Ga0307409_100262451 3300031995 Bacteria 1586
182 Ga0307409_100306652 3300031995 Bacteria 1480
183 Ga0307416_100008709 3300032002 Bacteria 6572
184 Ga0307416_100144388 3300032002 Bacteria 2170
185 Ga0307416_100311135 3300032002 Bacteria 1572
186 Ga0307416_100514818 3300032002 Bacteria 1264
187 Ga0307415_100072185 3300032126 Bacteria 2430
188 Ga0307415_100193943 3300032126 Bacteria 1605
189 Ga0307415_100220358 3300032126 Bacteria 1521
190 Ga0395905_0037932 3300037471 Bacteria 4522
191 Ga0395905_0361216 3300037471 Bacteria 1345
192 Ga0436364_0508956 3300037853 Bacteria 4848
193 Ga0395901_0009154 3300038443 Bacteria 10031
194 Ga0450907_010728 3300042146 Bacteria 1520
195 Ga0466972_0060818 3300044658 Bacteria 1812
196 Ga0466965_0011616 3300044683 Bacteria 4129
197 Ga0466965_0079650 3300044683 Bacteria 1655
198 Ga0466965_0177053 3300044683 Bacteria 1124
199 Ga0466966_0032425 3300044684 Bacteria 3385
200 Ga0466961_0017385 3300044693 Bacteria 4619
201 Ga0466963_0021558 3300044694 Bacteria 4067
202 Ga0466963_0051972 3300044694 Bacteria 2718
203 Ga0466963_0179071 3300044694 Bacteria 1480
204 Ga0466964_0053437 3300044706 Bacteria 1663
205 Ga0466971_0042222 3300044719 Bacteria 2049
206 Ga0466970_0003542 3300044765 Bacteria 7605
207 Ga0466970_0046309 3300044765 Bacteria 2316
208 Ga0466970_0058626 3300044765 Bacteria 2061
209 Ga0466970_0067225 3300044765 Bacteria 1924
210 Ga0466970_0093329 3300044765 Bacteria 1635
211 Ga0466957_0007038 3300044842 Bacteria 6358
212 Ga0466957_0099473 3300044842 Bacteria 1831
213 Ga0466960_0000222 3300044901 Bacteria 19771
214 Ga0466960_0011530 3300044901 Bacteria 3702
215 Ga0466960_0067704 3300044901 Bacteria 1769
216 Ga0466960_0104238 3300044901 Bacteria 1465
217 Ga0466960_0164238 3300044901 Bacteria 1194
218 Ga0466967_0000340 3300045976 Bacteria 21475
219 Ga0466967_0032331 3300045976 Bacteria 4416
220 Ga0466967_0159730 3300045976 Bacteria 2114
221 Ga0466967_0184881 3300045976 Bacteria 1967
222 Ga0466967_0349194 3300045976 Bacteria 1431
223 Ga0466967_0370051 3300045976 Bacteria 1390
224 Ga0495599_0149538 3300046678 Bacteria 1447
225 Ga0496100_0022720 3300048903 Bacteria 3799
226 Ga0496101_0003490 3300048904 Bacteria 9806
227 Ga0496101_0360621 3300048904 Bacteria 1143
228 Ga0496102_0074736 3300048905 Bacteria 3115
229 Ga0496102_0100523 3300048905 Bacteria 2686
230 Ga0496102_0137838 3300048905 Bacteria 2286
231 Ga0496102_0289163 3300048905 Bacteria 1545
232 Ga0496103_0025068 3300048906 Bacteria 3602
233 Ga0496103_0028896 3300048906 Bacteria 3368
234 Ga0496103_0317651 3300048906 Bacteria 1002
235 Ga0496104_0002161 3300048907 Bacteria 17061
236 Ga0496104_0819745 3300048907 Bacteria 836
237 Ga0496105_0001291 3300048908 Bacteria 17524
238 Ga0496105_0899955 3300048908 Bacteria 667
239 Ga0496107_0020989 3300048910 Bacteria 4616
240 Ga0496107_0021104 3300048910 Bacteria 4602
241 Ga0496108_0183936 3300048911 Bacteria 1810
242 Ga0496108_0327884 3300048911 Bacteria 1335
243 Ga0496109_0021583 3300048912 Bacteria 5696
244 Ga0496109_0033853 3300048912 Bacteria 4599
245 Ga0496109_0051411 3300048912 Bacteria 3753
246 Ga0496109_0056649 3300048912 Bacteria 3576
247 Ga0496109_0066793 3300048912 Bacteria 3294
248 Ga0496109_0288812 3300048912 Bacteria 1546
249 Ga0496109_0337194 3300048912 Bacteria 1424
250 Ga0496110_0005591 3300048913 Bacteria 9869
251 Ga0496110_0074761 3300048913 Bacteria 3010
252 Ga0496110_0082360 3300048913 Bacteria 2870
253 Ga0496110_0446997 3300048913 Bacteria 1178
254 Ga0496111_0003383 3300048914 Bacteria 9861
255 Ga0496112_0758580 3300048915 Bacteria 896
256 Ga0496113_0032502 3300048916 Bacteria 3793
257 Ga0496113_0039965 3300048916 Bacteria 3455
258 Ga0496114_0004149 3300048917 Bacteria 11211
259 Ga0496114_0007145 3300048917 Bacteria 8807
260 Ga0496114_0014378 3300048917 Bacteria 6351
261 Ga0496114_0016361 3300048917 Bacteria 5975
262 Ga0496114_0063568 3300048917 Bacteria 3090
263 Ga0496114_0104825 3300048917 Bacteria 2418
264 Ga0496114_0237026 3300048917 Bacteria 1604
265 Ga0496114_0670185 3300048917 Bacteria 911
266 Ga0496115_0003989 3300048918 Bacteria 10647
267 Ga0496115_0128929 3300048918 Bacteria 2084
268 Ga0496115_0190152 3300048918 Bacteria 1696
269 Ga0496124_0185612 3300048927 Bacteria 1596
270 Ga0501031_0003137 3300049568 Bacteria 10599
271 Ga0501031_0080948 3300049568 Bacteria 2117
272 Ga0501032_0042127 3300049569 Bacteria 3098
273 Ga0501032_0061177 3300049569 Bacteria 2525
274 Ga0501034_0024164 3300049571 Bacteria 6182
275 Ga0501034_0064009 3300049571 Bacteria 3691
276 Ga0501034_0690428 3300049571 Unclassified 920
277 Ga0501036_0009466 3300049572 Bacteria 8013
278 Ga0501036_0108453 3300049572 Bacteria 2347
279 Ga0501037_0030726 3300049573 Bacteria 3968
280 Ga0501037_0183733 3300049573 Bacteria 1483
281 Ga0501037_0353924 3300049573 Bacteria 1013
282 Ga0501038_0007045 3300049574 Bacteria 10383
283 Ga0501038_0080980 3300049574 Bacteria 2736
284 Ga0501038_0088965 3300049574 Bacteria 2591
285 Ga0501039_0033286 3300049575 Bacteria 3975
286 Ga0501039_0279162 3300049575 Bacteria 1313
287 Ga0501039_0410427 3300049575 Bacteria 1064
288 Ga0501040_0001609 3300049576 Bacteria 14398
289 Ga0501040_0202011 3300049576 Bacteria 1411
290 Ga0501041_0003311 3300049577 Bacteria 9265
291 Ga0501041_0369589 3300049577 Bacteria 907
292 Ga0501042_0001106 3300049578 Bacteria 15505
293 Ga0501042_0259089 3300049578 Bacteria 1255
294 Ga0501043_0198585 3300049579 Bacteria 1558
295 Ga0501046_0204267 3300049580 Bacteria 1469
296 Ga0501047_0083705 3300049581 Bacteria 3066
297 Ga0501047_0584441 3300049581 Bacteria 939
298 Ga0501048_0006259 3300049582 Bacteria 9052
299 Ga0501067_0009030 3300049583 Bacteria 5521
300 Ga0501067_0049629 3300049583 Bacteria 2325
301 Ga0501067_0067799 3300049583 Bacteria 1976
302 Ga0501067_0131599 3300049583 Bacteria 1392
303 Ga0501068_0021145 3300049584 Bacteria 3798
304 Ga0501068_0073050 3300049584 Bacteria 2095
305 Ga0501069_0008051 3300049585 Bacteria 5537
306 Ga0501069_0021313 3300049585 Bacteria 3515
307 Ga0501069_0021691 3300049585 Bacteria 3489
308 Ga0501069_0043810 3300049585 Bacteria 2478
309 Ga0501069_0148473 3300049585 Bacteria 1346
310 Ga0501069_0309636 3300049585 Bacteria 927
311 Ga0501070_0001128 3300049586 Bacteria 23951
312 Ga0501070_0026305 3300049586 Bacteria 4883
313 Ga0501070_0107838 3300049586 Bacteria 2301
314 Ga0501071_0006046 3300049587 Bacteria 7841
315 Ga0501071_0020255 3300049587 Bacteria 4621
316 Ga0501071_0108789 3300049587 Bacteria 2048
317 Ga0501071_0181843 3300049587 Bacteria 1575
318 Ga0501072_0010330 3300049588 Bacteria 7112
319 Ga0501072_0146820 3300049588 Bacteria 1880
320 Ga0501072_0535533 3300049588 Bacteria 925
321 Ga0501073_0022755 3300049589 Bacteria 4509
322 Ga0501073_0066656 3300049589 Bacteria 2509
323 Ga0501073_0167991 3300049589 Bacteria 1519
324 Ga0501073_0290485 3300049589 Unclassified 1128
325 Ga0501074_0002190 3300049590 Bacteria 13535
326 Ga0501074_0014132 3300049590 Bacteria 5804
327 Ga0501074_0061021 3300049590 Bacteria 2717
328 Ga0501075_0029663 3300049591 Bacteria 4047
329 Ga0501076_0029617 3300049592 Bacteria 4258
330 Ga0501077_0014295 3300049593 Bacteria 4986
331 Ga0501077_0038944 3300049593 Bacteria 3027
332 Ga0501077_0227824 3300049593 Bacteria 1185
333 Ga0501079_0008797 3300049741 Bacteria 7650
334 Ga0501079_0189494 3300049741 Bacteria 1605
335 Ga0501079_0608271 3300049741 Bacteria 860
336 Ga0501080_0027944 3300049742 Bacteria 5246
337 Ga0501080_0032083 3300049742 Bacteria 4897
338 Ga0501080_0032198 3300049742 Bacteria 4888
339 Ga0501080_0101893 3300049742 Bacteria 2664
340 Ga0501081_0066862 3300049743 Bacteria 2500
341 Ga0501083_0053399 3300049744 Bacteria 2713
342 Ga0501083_0060208 3300049744 Bacteria 2537
343 Ga0501045_0010195 3300049824 Bacteria 6578
344 Ga0501045_0028933 3300049824 Bacteria 4000
345 nmdc:mga03683_25463_c1 3300050489 Bacteria 2325
346 nmdc:mga03n38_10141_c1 3300050490 Bacteria 3455
347 nmdc:mga03n38_28454_c1 3300050490 Bacteria 2330
348 nmdc:mga03n38_369734_c1 3300050490 Bacteria 784
349 nmdc:mga03n38_386723_c1 3300050490 Bacteria 768
350 nmdc:mga00v17_126861_c1 3300050491 Bacteria 1628
351 nmdc:mga00v17_15403_c1 3300050491 Bacteria 4290
352 nmdc:mga00v17_16659_c1 3300050491 Bacteria 4145
353 nmdc:mga00v17_172687_c1 3300050491 Bacteria 1394
354 nmdc:mga00v17_18759_c2 3300050491 Bacteria 3519
355 nmdc:mga00v17_20347_c1 3300050491 Bacteria 3800
356 nmdc:mga00v17_41372_c1 3300050491 Bacteria 2767
357 nmdc:mga00v17_7464_c1 3300050491 Bacteria 5836
358 nmdc:mga00v17_75198_c1 3300050491 Bacteria 2100
359 nmdc:mga0yw44_107111_c1 3300050492 Bacteria 1787
360 nmdc:mga0yw44_119557_c1 3300050492 Bacteria 1696
361 nmdc:mga0yw44_157952_c1 3300050492 Bacteria 1483
362 nmdc:mga0yw44_269824_c1 3300050492 Bacteria 1136
363 nmdc:mga0yw44_29935_c1 3300050492 Bacteria 3149
364 nmdc:mga0yw44_462589_c1 3300050492 Bacteria 860
365 nmdc:mga0yw44_4627_c1 3300050492 Bacteria 6351
366 nmdc:mga0yw44_58005_c1 3300050492 Bacteria 2364
367 nmdc:mga0yw44_683_c1 3300050492 Bacteria 12392
368 nmdc:mga0yw44_76630_c1 3300050492 Bacteria 1141
369 nmdc:mga0yw44_81772_c1 3300050492 Bacteria 2026
370 nmdc:mga06z11_300907_c1 3300050494 Bacteria 953
371 nmdc:mga06z11_69401_c1 3300050494 Bacteria 1861
372 nmdc:mga04h51_98262_c1 3300050495 Bacteria 1064
373 nmdc:mga07m45_23545_c1 3300050496 Bacteria 3368
374 nmdc:mga07m45_32976_c1 3300050496 Bacteria 2874
375 nmdc:mga07m45_499841_c1 3300050496 Bacteria 704
376 nmdc:mga07m45_79838_c1 3300050496 Bacteria 1868
377 nmdc:mga07m45_8819_c1 3300050496 Bacteria 5201
378 nmdc:mga08y16_311713_c1 3300050511 Bacteria 1621
379 Ga0495619_0028529 3300053085 Bacteria 3601
380 Ga0495619_0162712 3300053085 Bacteria 1542
381 Ga0500644_0000047 3300053088 Bacteria 73844
382 Ga0500593_001482 3300053117 Bacteria 8443
383 Ga0501084_0007038 3300054114 Bacteria 9274
384 Ga0501084_0024871 3300054114 Bacteria 4998
385 Ga0501084_0040785 3300054114 Bacteria 3884
386 Ga0501082_0017359 3300060353 Bacteria 6200
387 Ga0501082_0025779 3300060353 Bacteria 5066
388 Ga0501082_0446745 3300060353 Unclassified 1129
389 Ga0501082_0554180 3300060353 Bacteria 1005
390 Ga0466962_0183583 3300061719 Bacteria 1020
391 2644089059 2643221615 Bacteria 5487866
392 2644318904 2643221657 Bacteria 5490246
393 2855387145 2855386786 Bacteria 4752232
394 Ga0157375_10234923
395 JGI24740J21852_10005878
396 JGI24735J21928_10004432
397 rootL2_10131108
398 Ga0070658_10034073
399 Ga0070658_10158648
400 Ga0070658_10529680
401 Ga0070683_100001232
402 Ga0070683_100017715
403 Ga0070683_100137096
404 Ga0070683_100217457
405 Ga0070683_100228530
406 Ga0070683_100704368
407 Ga0070680_100089840
408 Ga0070682_100008246
409 Ga0070682_100317542
410 Ga0070660_100015370
411 Ga0070660_100053245
412 Ga0070669_100575609
413 Ga0070659_100070262
414 Ga0070659_100151542
415 Ga0070667_100243781
416 Ga0070667_100435479
417 Ga0070700_100017270
418 Ga0070663_100090703
419 Ga0070678_100296853
420 Ga0070678_100546580
421 Ga0070662_100276761
422 Ga0070685_10109421
423 Ga0070698_100001988
424 Ga0070684_100010016
425 Ga0070684_100037092
426 Ga0070684_100194064
427 Ga0070684_100535688
428 Ga0068853_100059851
429 Ga0070693_100044131
430 Ga0070665_100001502
431 Ga0068855_100545860
432 Ga0070664_100067841
433 Ga0070664_100552202
434 Ga0068857_100039719
435 Ga0070702_100131830
436 Ga0068852_100296737
437 Ga0068864_100162189
438 Ga0068861_100140885
439 Ga0068870_10138436
440 Ga0068858_100109253
441 Ga0068860_100013790
442 Ga0081455_10068032
443 Ga0081539_10016728
444 Ga0075365_10000395
445 Ga0075365_10001285
446 Ga0075365_10010491
447 Ga0075365_10010698
448 Ga0075365_10039332
449 Ga0075365_10049602
450 Ga0075365_10052188
451 Ga0075365_10055419
452 Ga0075365_10089569
453 Ga0075365_10089709
454 Ga0075365_10124832
455 Ga0075365_10133118
456 Ga0075365_10163982
457 Ga0075365_10196214
458 Ga0075365_10202857
459 Ga0075365_10263308
460 Ga0075368_10000942
461 Ga0075368_10005362
462 Ga0075368_10135459
463 Ga0075363_100004211
464 Ga0075363_100006959
465 Ga0075363_100013941
466 Ga0075363_100065952
467 Ga0075363_100188810
468 Ga0075364_10018466
469 Ga0075364_10050626
470 Ga0075364_10054742
471 Ga0075364_10107282
472 Ga0075364_10169032
473 Ga0075362_10016163
474 Ga0075367_10006133
475 Ga0075367_10008287
476 Ga0075367_10031957
477 Ga0075367_10102287
478 Ga0075367_10351479
479 Ga0075370_10007754
480 Ga0075370_10217181
481 Ga0075370_10253108
482 Ga0075370_10263204
483 Ga0075428_100433756
484 Ga0068865_100209527
485 Ga0068865_100306454
486 Ga0068865_100706202
487 Ga0111539_10025612
488 Ga0105245_10004191
489 Ga0105245_10292730
490 Ga0105245_10713614
491 Ga0105248_10196433
492 Ga0105248_10236058
493 Ga0105248_10461527
494 Ga0105237_10079190
495 Ga0105249_10046879
496 Ga0105249_10192796
497 Ga0105249_10602578
498 Ga0105239_10001401
499 Ga0105239_10039937
500 Ga0105246_10380926
501 Ga0157369_10010249
502 Ga0163162_10008688
503 Ga0157372_10003488
504 Ga0157372_10892021
505 Ga0157375_10072659
506 Ga0157375_10264575
507 Ga0157375_10274373
508 Ga0157375_10567802
509 Ga0157375_10840988
510 Ga0163163_10030323
511 Ga0157380_10206030
512 Ga0182008_10041829
513 Ga0157379_10079948
514 Ga0157376_10377168
515 Ga0163161_10045039
516 Ga0206353_10723439
517 Ga0206353_11077275
518 Ga0207688_10129831
519 Ga0207688_10225216
520 Ga0207688_10319282
521 Ga0207647_10022314
522 Ga0207647_10023348
523 Ga0207705_10087551
524 Ga0207705_10118044
525 Ga0207707_10176575
526 Ga0207662_10045159
527 Ga0207657_10018422
528 Ga0207657_10103024
529 Ga0207687_10011578
530 Ga0207687_10262596
531 Ga0207690_10022739
532 Ga0207690_10026631
533 Ga0207690_10421251
534 Ga0207669_10225092
535 Ga0207704_10069255
536 Ga0207711_10074985
537 Ga0207711_10591209
538 Ga0207661_10008301
539 Ga0207661_10050697
540 Ga0207661_10180475
541 Ga0207661_10554215
542 Ga0207679_10004736
543 Ga0207712_10076697
544 Ga0207658_10340335
545 Ga0207658_10462220
546 Ga0207703_10429641
547 Ga0207708_10014813
548 Ga0207708_10166166
549 Ga0207702_10089711
550 Ga0207676_10067745
551 Ga0207674_10046688
552 Ga0207675_100023030
553 Ga0207675_101131820
554 Ga0207683_10330492
555 Ga0207683_10563790
556 Ga0207683_10809608
557 Ga0207698_10022798
558 Ga0207698_10336555
559 Ga0209813_10002225
560 Ga0209813_10005452
561 Ga0207428_10106990
562 Ga0268266_10005197
563 Ga0268266_10067368
564 Ga0268265_10294488
565 Ga0268264_10001927
566 Ga0268264_10235606
567 Ga0307405_10019820
568 Ga0307405_10114188
569 Ga0307410_10333247
570 Ga0307412_10124030
571 Ga0307412_10597491
572 Ga0307409_100075082
573 Ga0307409_100087769
574 Ga0307409_100262451
575 Ga0307409_100306652
576 Ga0307416_100008709
577 Ga0307416_100144388
578 Ga0307416_100311135
579 Ga0307416_100514818
580 Ga0307415_100072185
581 Ga0307415_100193943
582 Ga0307415_100220358
583 Ga0395905_0037932
584 Ga0395905_0361216
585 Ga0436364_0508956
586 Ga0395901_0009154
587 Ga0450907_010728
588 Ga0466972_0060818
589 Ga0466965_0011616
590 Ga0466965_0079650
591 Ga0466965_0177053
592 Ga0466966_0032425
593 Ga0466961_0017385
594 Ga0466963_0021558
595 Ga0466963_0051972
596 Ga0466963_0179071
597 Ga0466964_0053437
598 Ga0466971_0042222
599 Ga0466970_0003542
600 Ga0466970_0046309
601 Ga0466970_0058626
602 Ga0466970_0067225
603 Ga0466970_0093329
604 Ga0466957_0007038
605 Ga0466957_0099473
606 Ga0466960_0000222
607 Ga0466960_0011530
608 Ga0466960_0067704
609 Ga0466960_0104238
610 Ga0466960_0164238
611 Ga0466967_0000340
612 Ga0466967_0032331
613 Ga0466967_0159730
614 Ga0466967_0184881
615 Ga0466967_0349194
616 Ga0466967_0370051
617 Ga0495599_0149538
618 Ga0496100_0022720
619 Ga0496101_0003490
620 Ga0496101_0360621
621 Ga0496102_0074736
622 Ga0496102_0100523
623 Ga0496102_0137838
624 Ga0496102_0289163
625 Ga0496103_0025068
626 Ga0496103_0028896
627 Ga0496103_0317651
628 Ga0496104_0002161
629 Ga0496104_0819745
630 Ga0496105_0001291
631 Ga0496105_0899955
632 Ga0496107_0020989
633 Ga0496107_0021104
634 Ga0496108_0183936
635 Ga0496108_0327884
636 Ga0496109_0021583
637 Ga0496109_0033853
638 Ga0496109_0051411
639 Ga0496109_0056649
640 Ga0496109_0066793
641 Ga0496109_0288812
642 Ga0496109_0337194
643 Ga0496110_0005591
644 Ga0496110_0074761
645 Ga0496110_0082360
646 Ga0496110_0446997
647 Ga0496111_0003383
648 Ga0496112_0758580
649 Ga0496113_0032502
650 Ga0496113_0039965
651 Ga0496114_0004149
652 Ga0496114_0007145
653 Ga0496114_0014378
654 Ga0496114_0016361
655 Ga0496114_0063568
656 Ga0496114_0104825
657 Ga0496114_0237026
658 Ga0496114_0670185
659 Ga0496115_0003989
660 Ga0496115_0128929
661 Ga0496115_0190152
662 Ga0496124_0185612
663 Ga0501031_0003137
664 Ga0501031_0080948
665 Ga0501032_0042127
666 Ga0501032_0061177
667 Ga0501034_0024164
668 Ga0501034_0064009
669 Ga0501034_0690428
670 Ga0501036_0009466
671 Ga0501036_0108453
672 Ga0501037_0030726
673 Ga0501037_0183733
674 Ga0501037_0353924
675 Ga0501038_0007045
676 Ga0501038_0080980
677 Ga0501038_0088965
678 Ga0501039_0033286
679 Ga0501039_0279162
680 Ga0501039_0410427
681 Ga0501040_0001609
682 Ga0501040_0202011
683 Ga0501041_0003311
684 Ga0501041_0369589
685 Ga0501042_0001106
686 Ga0501042_0259089
687 Ga0501043_0198585
688 Ga0501046_0204267
689 Ga0501047_0083705
690 Ga0501047_0584441
691 Ga0501048_0006259
692 Ga0501067_0009030
693 Ga0501067_0049629
694 Ga0501067_0067799
695 Ga0501067_0131599
696 Ga0501068_0021145
697 Ga0501068_0073050
698 Ga0501069_0008051
699 Ga0501069_0021313
700 Ga0501069_0021691
701 Ga0501069_0043810
702 Ga0501069_0148473
703 Ga0501069_0309636
704 Ga0501070_0001128
705 Ga0501070_0026305
706 Ga0501070_0107838
707 Ga0501071_0006046
708 Ga0501071_0020255
709 Ga0501071_0108789
710 Ga0501071_0181843
711 Ga0501072_0010330
712 Ga0501072_0146820
713 Ga0501072_0535533
714 Ga0501073_0022755
715 Ga0501073_0066656
716 Ga0501073_0167991
717 Ga0501073_0290485
718 Ga0501074_0002190
719 Ga0501074_0014132
720 Ga0501074_0061021
721 Ga0501075_0029663
722 Ga0501076_0029617
723 Ga0501077_0014295
724 Ga0501077_0038944
725 Ga0501077_0227824
726 Ga0501079_0008797
727 Ga0501079_0189494
728 Ga0501079_0608271
729 Ga0501080_0027944
730 Ga0501080_0032083
731 Ga0501080_0032198
732 Ga0501080_0101893
733 Ga0501081_0066862
734 Ga0501083_0053399
735 Ga0501083_0060208
736 Ga0501045_0010195
737 Ga0501045_0028933
738 nmdc:mga03683_25463_c1
739 nmdc:mga03n38_10141_c1
740 nmdc:mga03n38_28454_c1
741 nmdc:mga03n38_369734_c1
742 nmdc:mga03n38_386723_c1
743 nmdc:mga00v17_126861_c1
744 nmdc:mga00v17_15403_c1
745 nmdc:mga00v17_16659_c1
746 nmdc:mga00v17_172687_c1
747 nmdc:mga00v17_18759_c2
748 nmdc:mga00v17_20347_c1
749 nmdc:mga00v17_41372_c1
750 nmdc:mga00v17_7464_c1
751 nmdc:mga00v17_75198_c1
752 nmdc:mga0yw44_107111_c1
753 nmdc:mga0yw44_119557_c1
754 nmdc:mga0yw44_157952_c1
755 nmdc:mga0yw44_269824_c1
756 nmdc:mga0yw44_29935_c1
757 nmdc:mga0yw44_462589_c1
758 nmdc:mga0yw44_4627_c1
759 nmdc:mga0yw44_58005_c1
760 nmdc:mga0yw44_683_c1
761 nmdc:mga0yw44_76630_c1
762 nmdc:mga0yw44_81772_c1
763 nmdc:mga06z11_300907_c1
764 nmdc:mga06z11_69401_c1
765 nmdc:mga04h51_98262_c1
766 nmdc:mga07m45_23545_c1
767 nmdc:mga07m45_32976_c1
768 nmdc:mga07m45_499841_c1
769 nmdc:mga07m45_79838_c1
770 nmdc:mga07m45_8819_c1
771 nmdc:mga08y16_311713_c1
772 Ga0495619_0028529
773 Ga0495619_0162712
774 Ga0500644_0000047
775 Ga0500593_001482
776 Ga0501084_0007038
777 Ga0501084_0024871
778 Ga0501084_0040785
779 Ga0501082_0017359
780 Ga0501082_0025779
781 Ga0501082_0446745
782 Ga0501082_0554180
783 Ga0466962_0183583
784 2644089059
785 2644318904
786 2855387145

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

45

105

0.96

PF08279

HTH_11

HTH domain

67

106

0.94

PF07729

FCD

FCD domain

133

255

0.93

PF02082

Rrf2

Iron-dependent Transcriptional regulator

51

115

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7wjg-assembly1.cif.gz_A-2 streptococcus mutans busr transcriptional factor 0.922 23 89
4u0y-assembly1.cif.gz_A crystal structure of the dna-binding domains of yvoa in complex with palindromic operator dna 0.8898 23 88
2ek5-assembly4.cif.gz_C crystal structure of the transcriptional factor from c.glutamicum at 2.2 angstrom resolution 0.887 20 88
2ek5-assembly4.cif.gz_C-3 crystal structure of the transcriptional factor from c.glutamicum at 2.2 angstrom resolution 0.887 20 88
4r1h-assembly1.cif.gz_B gntr family transcriptional regulator from listeria monocytogenes 0.8802 17 90
ID Description Score Start End Superfamily
af_P31475_2_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9623 22 89 1.10.10.10
af_P9WMG7_15_85_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9485 22 90 1.10.10.10
af_P31460_2_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9432 19 89 1.10.10.10
af_Q2G1P1_1_44_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9376 44 88 1.10.10.10
af_Q79G00_16_82_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9359 22 87 1.10.10.10
ID Description Score Start End GO Terms
AF-D2Q4B8-F1-model_v4 GntR domain protein 0.9188 8 244 GO:0003677
GO:0003700
AF-A0A661M197-F1-model_v4 GntR C-terminal domain-containing protein 0.8996 108 241 GO:0003677
AF-A0A1B2I2H4-F1-model_v4 GntR C-terminal domain-containing protein 0.893 112 242 GO:0003677
AF-D2Q4B8-F1-model_v4 GntR domain protein 0.8903 8 244 GO:0003677
GO:0003700
AF-A0A3E0WF13-F1-model_v4 GntR family transcriptional regulator 0.8787 1 244 GO:0003677
GO:0003700

Map