F431535

General Info

Members Datasets Scaffolds Average Seq Length
389 216 348 302

Family's Representative Sequence

Representative Sequence 3300046506|Ga0495583_0105884|Ga0495583_0105884_34_1047
Length 337
Sequence LLAFVFHIQQYSINGWSKKHFAYNHSPKKCIFAAMITKEQITADYQLIQDEICAALEELDGSATFEQELWEREGGGGGRTRVIQNGNILEKGGVNFSAVHGELPEVMKKALKVEENDFFATGISIVMHPNHPMVPIIHMNIRYFEMPSSFGTDKPPVRWFGGGIDLTPHYVFEDDARFFHQHLKTVCDQYSNEFYPRFKPWADDYFYIKHRQETRGIGGIFYDKLVATNDLSWQEIFEFSKTLGRSFIPAYTELVNRNRNKAYTEKQQEWQYLRRSRYAEFNLVYDAGTKFGLETNGRIESILMSLPPTAKWLYNYQAEENSEEAKTLSLLKKGINW

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
5 2738541283 Pedobacter sp. OK701 Isolate Unclassified
6 2738541284 Pedobacter sp. YR016 Isolate Unclassified
7 2738541302 Pedobacter sp. CF074 Isolate Unclassified
8 2738543023 Pedobacter sp. OK628 Isolate Unclassified
9 2739367651 Pedobacter sp. OK291 Isolate Unclassified
10 2739367656 Pedobacter sp. CF523 Isolate Unclassified
11 2739367663 Pedobacter sp. YR510 Isolate Unclassified
12 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
13 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
14 2818991437 Pedobacter terrae 518 Isolate Unclassified
15 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
16 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
17 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
18 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
19 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
20 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
21 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
22 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
23 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
24 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
25 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
26 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
27 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
28 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
29 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
30 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
31 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
32 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
33 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
34 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
35 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
36 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
37 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
38 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
39 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
40 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
41 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
42 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
43 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
44 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
45 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
46 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
47 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
48 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
49 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
50 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
51 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
52 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
53 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
54 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
55 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
56 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
57 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
58 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
59 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
60 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
61 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
62 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
63 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
64 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
65 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
66 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
67 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
68 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
69 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
70 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
71 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
72 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
73 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
74 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
75 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
76 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
77 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
78 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
79 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
80 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
81 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
82 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
83 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
84 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
85 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
86 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
87 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
88 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
89 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
90 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
91 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
92 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
93 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
94 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
95 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
96 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
97 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
98 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
99 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
100 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
101 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
102 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
103 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
104 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
105 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
106 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
107 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
108 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
109 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
110 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
112 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
113 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
114 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
115 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
116 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
117 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
120 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
121 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
148 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
149 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
150 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
151 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
152 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
153 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
154 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
155 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
156 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
157 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
158 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
159 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
160 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
161 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
162 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
163 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
164 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
165 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
166 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
167 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
168 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
169 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
170 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
171 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
172 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
173 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
174 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
175 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
176 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
177 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
178 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
179 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
180 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
181 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
182 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
183 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
184 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
185 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
186 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
187 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
188 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
189 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
190 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
191 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
192 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
193 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
194 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
195 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
196 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
197 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
198 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
199 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
200 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
201 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
202 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
203 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
204 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
205 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
206 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
207 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
208 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
209 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
210 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
211 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
212 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
213 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
214 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
215 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
216 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.2
Metatranscriptomes 0.26
Isolates 10.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.51
Nodule 0
Rhizoplane 0.26
Rhizosphere 80.72
Stem 0
Stem Tuber 0
Unclassified 9.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1013517 3300001904 Bacteria 1317
2 JGI24739J22299_10020078 3300001989 Bacteria 2387
3 JGI24737J22298_10000149 3300001990 Bacteria 21865
4 JGI24735J21928_10000014 3300002067 Bacteria 186670
5 JGI25162J39368_1000020 3300002737 Bacteria 254723
6 JGI25162J39368_1001098 3300002737 Bacteria 16423
7 JGI25152J39213_1000075 3300002773 Bacteria 66427
8 JGI25150J39212_1000009 3300002774 Bacteria 249509
9 JGI25151J46595_10000017 3300003187 Bacteria 249509
10 JGI25165J46597_1000898 3300003214 Bacteria 20764
11 JGI25153J46596_10000023 3300003215 Bacteria 249509
12 rootH1_10025788 3300003316 Bacteria 15296
13 rootH2_10017200 3300003320 Bacteria 3451
14 rootH2_10025162 3300003320 Bacteria 10672
15 rootH2_10059243 3300003320 Bacteria 9365
16 rootH2_10232232 3300003320 Bacteria 1432
17 rootH1_10012846 3300003323 Bacteria 47357
18 rootH1_10207941 3300003323 Bacteria 4547
19 Ga0055536_1000011 3300003781 Bacteria 275969
20 Ga0055530_10002397 3300003791 Bacteria 12131
21 Ga0065165_1000152 3300005262 Bacteria 120418
22 Ga0065714_10002817 3300005288 Bacteria 18955
23 Ga0065714_10003488 3300005288 Bacteria 6971
24 Ga0065714_10005575 3300005288 Bacteria 3799
25 Ga0065714_10064511 3300005288 Bacteria 45172
26 Ga0065714_10065446 3300005288 Bacteria 10043
27 Ga0065714_10112924 3300005288 Bacteria 1440
28 Ga0065704_10000288 3300005289 Bacteria 77379
29 Ga0065704_10078585 3300005289 Bacteria 4388
30 Ga0070658_10000011 3300005327 Bacteria 294396
31 Ga0070658_10032672 3300005327 Bacteria 4184
32 Ga0070658_10300652 3300005327 Unclassified 1368
33 Ga0070658_10349819 3300005327 Bacteria 1265
34 Ga0070676_10000615 3300005328 Bacteria 17358
35 Ga0070683_100026195 3300005329 Bacteria 5247
36 Ga0068868_100060727 3300005338 Bacteria 2994
37 Ga0068868_100343201 3300005338 Bacteria 1277
38 Ga0070660_100007712 3300005339 Bacteria 7503
39 Ga0070671_100001785 3300005355 Bacteria 16335
40 Ga0070673_100008914 3300005364 Bacteria 6705
41 Ga0070659_100000383 3300005366 Bacteria 33558
42 Ga0070659_100009256 3300005366 Bacteria 7231
43 Ga0070659_100113466 3300005366 Bacteria 2189
44 Ga0070714_100155802 3300005435 Bacteria 2062
45 Ga0070663_100079727 3300005455 Bacteria 2403
46 Ga0070678_100001439 3300005456 Bacteria 12682
47 Ga0070662_100000068 3300005457 Bacteria 56624
48 Ga0070681_10023791 3300005458 Bacteria 6166
49 Ga0068867_100030943 3300005459 Bacteria 3862
50 Ga0070685_10006019 3300005466 Bacteria 6181
51 Ga0070679_100011654 3300005530 Bacteria 8379
52 Ga0070684_100121864 3300005535 Bacteria 2346
53 Ga0068853_100047108 3300005539 Bacteria 3699
54 Ga0068853_100086738 3300005539 Bacteria 2745
55 Ga0068853_100460965 3300005539 Bacteria 1196
56 Ga0070665_100000003 3300005548 Bacteria 811857
57 Ga0068855_100000042 3300005563 Bacteria 149332
58 Ga0068855_100000652 3300005563 Bacteria 42351
59 Ga0068855_100019393 3300005563 Bacteria 8171
60 Ga0068855_100075273 3300005563 Bacteria 3921
61 Ga0068855_100086538 3300005563 Bacteria 3624
62 Ga0068855_100145438 3300005563 Bacteria 2699
63 Ga0068855_100156096 3300005563 Bacteria 2593
64 Ga0068857_100010370 3300005577 Bacteria 8096
65 Ga0068856_100000259 3300005614 Bacteria 57810
66 Ga0068856_100001806 3300005614 Bacteria 22338
67 Ga0068856_100007300 3300005614 Bacteria 10786
68 Ga0068856_100023566 3300005614 Bacteria 5985
69 Ga0068856_100125095 3300005614 Bacteria 2574
70 Ga0068856_100161756 3300005614 Bacteria 2249
71 Ga0068856_100237960 3300005614 Bacteria 1836
72 Ga0068856_100376427 3300005614 Bacteria 1439
73 Ga0068852_100004264 3300005616 Bacteria 10099
74 Ga0068870_10043486 3300005840 Bacteria 2343
75 Ga0068860_100014560 3300005843 Bacteria 7696
76 Ga0097621_100000020 3300006237 Bacteria 86226
77 Ga0068871_100000229 3300006358 Bacteria 39643
78 Ga0068865_100000208 3300006881 Bacteria 32611
79 Ga0105240_10000068 3300009093 Bacteria 207756
80 Ga0105240_10043040 3300009093 Bacteria 5750
81 Ga0105240_10072132 3300009093 Bacteria 4269
82 Ga0105240_10145499 3300009093 Bacteria 2828
83 Ga0105240_10178185 3300009093 Bacteria 2511
84 Ga0105240_10201374 3300009093 Bacteria 2333
85 Ga0105240_10324410 3300009093 Unclassified 1754
86 Ga0105240_10569343 3300009093 Bacteria 1251
87 Ga0105245_10592679 3300009098 Unclassified 1134
88 Ga0105243_10000007 3300009148 Bacteria 445042
89 Ga0105241_10004485 3300009174 Bacteria 10323
90 Ga0105242_10082534 3300009176 Bacteria 2690
91 Ga0105237_10000274 3300009545 Bacteria 72354
92 Ga0105237_10000356 3300009545 Bacteria 64629
93 Ga0105237_10013178 3300009545 Bacteria 8674
94 Ga0105237_10018786 3300009545 Bacteria 7149
95 Ga0105237_10043584 3300009545 Bacteria 4519
96 Ga0105237_10056920 3300009545 Bacteria 3913
97 Ga0105237_10059768 3300009545 Bacteria 3813
98 Ga0105237_10089313 3300009545 Bacteria 3071
99 Ga0105237_10095111 3300009545 Bacteria 2968
100 Ga0105238_10101445 3300009551 Unclassified 2860
101 Ga0105238_10127083 3300009551 Bacteria 2528
102 Ga0105238_10129005 3300009551 Bacteria 2507
103 Ga0105239_10000002 3300010375 Bacteria 610298
104 Ga0105239_10000010 3300010375 Bacteria 341545
105 Ga0105239_10000081 3300010375 Bacteria 133686
106 Ga0105239_10000259 3300010375 Bacteria 78760
107 Ga0105239_10007919 3300010375 Bacteria 12147
108 Ga0105239_10008945 3300010375 Bacteria 11330
109 Ga0157373_10000041 3300013100 Bacteria 113871
110 Ga0157373_10000328 3300013100 Bacteria 38459
111 Ga0157373_10003598 3300013100 Bacteria 11702
112 Ga0157373_10005557 3300013100 Bacteria 9449
113 Ga0157373_10006080 3300013100 Bacteria 9026
114 Ga0157373_10017756 3300013100 Bacteria 5180
115 Ga0157371_10000009 3300013102 Bacteria 392895
116 Ga0157371_10001189 3300013102 Bacteria 27874
117 Ga0157371_10001251 3300013102 Bacteria 26880
118 Ga0157371_10001338 3300013102 Bacteria 25928
119 Ga0157371_10002029 3300013102 Bacteria 19994
120 Ga0157371_10025433 3300013102 Bacteria 4315
121 Ga0157371_10078892 3300013102 Bacteria 2332
122 Ga0157371_10110352 3300013102 Bacteria 1953
123 Ga0157371_10228657 3300013102 Bacteria 1337
124 Ga0157370_10000545 3300013104 Bacteria 46921
125 Ga0157370_10124228 3300013104 Bacteria 2409
126 Ga0157370_10197748 3300013104 Bacteria 1865
127 Ga0157370_10223583 3300013104 Bacteria 1743
128 Ga0157370_10272092 3300013104 Bacteria 1565
129 Ga0157370_10662483 3300013104 Bacteria 954
130 Ga0157369_10000006 3300013105 Bacteria 412230
131 Ga0157369_10000039 3300013105 Bacteria 188947
132 Ga0157369_10024387 3300013105 Bacteria 6729
133 Ga0157369_10139019 3300013105 Bacteria 2570
134 Ga0157369_10166543 3300013105 Bacteria 2324
135 Ga0157369_10389288 3300013105 Bacteria 1446
136 Ga0157374_10000206 3300013296 Bacteria 54254
137 Ga0157374_10001085 3300013296 Bacteria 23473
138 Ga0157374_10032111 3300013296 Bacteria 4779
139 Ga0157378_10081516 3300013297 Bacteria 2924
140 Ga0163162_10000066 3300013306 Bacteria 100009
141 Ga0163162_10000178 3300013306 Bacteria 58523
142 Ga0163162_10001561 3300013306 Bacteria 21390
143 Ga0163162_10014096 3300013306 Bacteria 7812
144 Ga0157372_10000001 3300013307 Bacteria 791349
145 Ga0157372_10000372 3300013307 Bacteria 49527
146 Ga0157372_10008550 3300013307 Bacteria 10871
147 Ga0157372_10012004 3300013307 Bacteria 9225
148 Ga0157372_10180658 3300013307 Bacteria 2442
149 Ga0157372_10181841 3300013307 Bacteria 2434
150 Ga0157372_10290201 3300013307 Unclassified 1902
151 Ga0157375_10023411 3300013308 Bacteria 5699
152 Ga0182008_10000001 3300014497 Bacteria 540790
153 Ga0182008_10001546 3300014497 Bacteria 15298
154 Ga0182008_10022396 3300014497 Bacteria 3236
155 Ga0182008_10071924 3300014497 Bacteria 1701
156 Ga0182008_10079064 3300014497 Bacteria 1618
157 Ga0157377_10014700 3300014745 Bacteria 3988
158 Ga0182006_1000308 3300015261 Bacteria 42741
159 Ga0182006_1001272 3300015261 Bacteria 15558
160 Ga0182006_1047297 3300015261 Bacteria 1668
161 Ga0182007_10000001 3300015262 Bacteria 1127301
162 Ga0182007_10005992 3300015262 Bacteria 5272
163 Ga0183373_1006 3300015682 Bacteria 328276
164 Ga0163161_10000405 3300017792 Bacteria 36132
165 Ga0163161_10000934 3300017792 Bacteria 22533
166 Ga0163161_10003366 3300017792 Bacteria 11214
167 Ga0163161_10040522 3300017792 Bacteria 3346
168 Ga0163161_10044449 3300017792 Bacteria 3199
169 Ga0163161_10167343 3300017792 Bacteria 1679
170 Ga0209563_106082 3300025230 Bacteria 2109
171 Ga0207427_100163 3300025231 Bacteria 74501
172 Ga0209437_100085 3300025233 Bacteria 254790
173 Ga0209437_100101 3300025233 Bacteria 226668
174 Ga0207425_1000007 3300025245 Bacteria 777411
175 Ga0209026_1000361 3300025250 Bacteria 42722
176 Ga0209129_1000006 3300025258 Bacteria 777761
177 Ga0209233_1000124 3300025261 Bacteria 226743
178 Ga0209233_1014647 3300025261 Bacteria 2203
179 Ga0209455_1004579 3300025272 Bacteria 4483
180 Ga0209676_1000001 3300025292 Bacteria 1852142
181 Ga0209676_1002065 3300025292 Bacteria 15619
182 Ga0209025_1000025 3300025294 Bacteria 524454
183 Ga0209758_1000016 3300025297 Bacteria 778557
184 Ga0209050_1000016 3300025298 Bacteria 729149
185 Ga0207647_10000820 3300025904 Bacteria 24125
186 Ga0207647_10001459 3300025904 Bacteria 18183
187 Ga0207645_10000544 3300025907 Bacteria 31399
188 Ga0207705_10000015 3300025909 Bacteria 382901
189 Ga0207705_10295721 3300025909 Unclassified 1241
190 Ga0207654_10064956 3300025911 Bacteria 2147
191 Ga0207695_10000131 3300025913 Bacteria 223762
192 Ga0207695_10002296 3300025913 Bacteria 28532
193 Ga0207695_10040836 3300025913 Bacteria 4969
194 Ga0207695_10122154 3300025913 Bacteria 2571
195 Ga0207695_10159377 3300025913 Bacteria 2189
196 Ga0207695_10328291 3300025913 Bacteria 1419
197 Ga0207671_10000993 3300025914 Bacteria 34894
198 Ga0207671_10008174 3300025914 Bacteria 8923
199 Ga0207671_10008258 3300025914 Bacteria 8857
200 Ga0207671_10012593 3300025914 Bacteria 6793
201 Ga0207671_10013089 3300025914 Bacteria 6628
202 Ga0207671_10030641 3300025914 Bacteria 4010
203 Ga0207671_10035690 3300025914 Bacteria 3688
204 Ga0207671_10049165 3300025914 Bacteria 3121
205 Ga0207657_10035452 3300025919 Bacteria 4474
206 Ga0207652_10003351 3300025921 Bacteria 13240
207 Ga0207694_10146928 3300025924 Bacteria 1898
208 Ga0207687_10393958 3300025927 Unclassified 1137
209 Ga0207664_10137383 3300025929 Bacteria 2064
210 Ga0207644_10065831 3300025931 Bacteria 2636
211 Ga0207690_10003441 3300025932 Bacteria 9445
212 Ga0207690_10083554 3300025932 Bacteria 2236
213 Ga0207706_10000126 3300025933 Bacteria 82630
214 Ga0207709_10000033 3300025935 Bacteria 320483
215 Ga0207704_10000209 3300025938 Bacteria 29657
216 Ga0207661_10017023 3300025944 Bacteria 5370
217 Ga0207667_10000037 3300025949 Bacteria 297252
218 Ga0207667_10001001 3300025949 Bacteria 36044
219 Ga0207667_10017369 3300025949 Bacteria 8099
220 Ga0207667_10127119 3300025949 Bacteria 2626
221 Ga0207667_10128051 3300025949 Bacteria 2615
222 Ga0207639_10014946 3300026041 Bacteria 5469
223 Ga0207639_10030522 3300026041 Bacteria 3953
224 Ga0207702_10000820 3300026078 Bacteria 32858
225 Ga0207702_10023253 3300026078 Bacteria 5140
226 Ga0207702_10050013 3300026078 Bacteria 3528
227 Ga0207702_10056396 3300026078 Bacteria 3335
228 Ga0207702_10187089 3300026078 Bacteria 1910
229 Ga0207702_10198143 3300026078 Unclassified 1860
230 Ga0207648_10004149 3300026089 Bacteria 14992
231 Ga0207683_10002255 3300026121 Bacteria 16919
232 Ga0207698_10002540 3300026142 Bacteria 10837
233 Ga0268266_10000052 3300028379 Bacteria 296230
234 Ga0268264_10018753 3300028381 Bacteria 5656
235 Ga0307517_10005359 3300028786 Bacteria 19372
236 Ga0307515_10000432 3300028794 Bacteria 100348
237 Ga0307515_10136445 3300028794 Bacteria 2664
238 Ga0316177_1022580 3300030731 Bacteria 4887
239 Ga0316176_1020373 3300030732 Bacteria 27096
240 Ga0316183_1111132 3300030742 Bacteria 56687
241 Ga0316181_1115069 3300030744 Bacteria 5054
242 Ga0265327_10009643 3300031251 Bacteria 6932
243 Ga0307509_10078525 3300031507 Bacteria 3419
244 Ga0307408_100000329 3300031548 Bacteria 45457
245 Ga0307408_100001238 3300031548 Bacteria 19167
246 Ga0307408_100002526 3300031548 Bacteria 12790
247 Ga0307408_100086419 3300031548 Bacteria 2358
248 Ga0307405_10000010 3300031731 Bacteria 250978
249 Ga0307405_10048925 3300031731 Bacteria 2610
250 Ga0307405_10051036 3300031731 Bacteria 2565
251 Ga0307405_10097122 3300031731 Bacteria 1966
252 Ga0307413_10142358 3300031824 Bacteria 1659
253 Ga0307407_10000009 3300031903 Bacteria 188746
254 Ga0307412_10000033 3300031911 Bacteria 206649
255 Ga0307409_100035512 3300031995 Bacteria 3654
256 Ga0307416_100000019 3300032002 Bacteria 199706
257 Ga0307416_100001967 3300032002 Bacteria 11516
258 Ga0307416_100063139 3300032002 Bacteria 3032
259 Ga0307414_10001227 3300032004 Bacteria 13215
260 Ga0307414_10010822 3300032004 Bacteria 5319
261 Ga0307414_10021746 3300032004 Bacteria 4034
262 Ga0307414_10028127 3300032004 Bacteria 3642
263 Ga0307414_10057488 3300032004 Bacteria 2734
264 Ga0307414_10074839 3300032004 Bacteria 2455
265 Ga0307414_10095391 3300032004 Bacteria 2223
266 Ga0307414_10433430 3300032004 Bacteria 1149
267 Ga0307411_10311401 3300032005 Bacteria 1267
268 Ga0307507_10002988 3300033179 Bacteria 33879
269 Ga0307510_10016554 3300033180 Bacteria 8704
270 Ga0395899_0000001 3300037312 Bacteria 1750322
271 Ga0395899_0000254 3300037312 Bacteria 70643
272 Ga0395899_0000608 3300037312 Bacteria 37382
273 Ga0395899_0000735 3300037312 Bacteria 32677
274 Ga0395899_0034235 3300037312 Bacteria 3814
275 Ga0395900_0000330 3300037418 Bacteria 69819
276 Ga0395900_0185741 3300037418 Bacteria 2110
277 Ga0395900_0272332 3300037418 Bacteria 1687
278 Ga0395905_0000301 3300037471 Bacteria 72121
279 Ga0395905_0000340 3300037471 Bacteria 66412
280 Ga0395901_0000818 3300038443 Bacteria 34480
281 Ga0395901_0002979 3300038443 Bacteria 17081
282 Ga0395901_0007093 3300038443 Bacteria 11329
283 Ga0436361_0683633 3300039447 Bacteria 8362
284 Ga0466969_0136778 3300044656 Unclassified 1134
285 Ga0466966_0021089 3300044684 Bacteria 4279
286 Ga0466966_0277611 3300044684 Bacteria 1008
287 Ga0451576_0000020 3300045051 Bacteria 529568
288 Ga0466958_0135013 3300045836 Bacteria 1551
289 Ga0495650_0000003 3300046471 Bacteria 900730
290 Ga0495585_0000085 3300046492 Bacteria 97836
291 Ga0495585_0003908 3300046492 Bacteria 9881
292 Ga0495583_0105884 3300046506 Bacteria 1196
293 Ga0495606_0000145 3300046507 Bacteria 122857
294 Ga0495606_0014997 3300046507 Bacteria 6007
295 Ga0495606_0152542 3300046507 Bacteria 1355
296 Ga0495610_0000028 3300046512 Bacteria 272572
297 Ga0495610_0003550 3300046512 Bacteria 12080
298 Ga0495610_0005649 3300046512 Bacteria 8819
299 Ga0495631_0005644 3300046518 Bacteria 6528
300 Ga0495637_0029957 3300046520 Bacteria 2418
301 Ga0495648_0008324 3300046524 Bacteria 8176
302 Ga0495652_0046989 3300046529 Bacteria 3704
303 Ga0495609_0004504 3300046538 Bacteria 7600
304 Ga0495622_0081807 3300046557 Bacteria 1486
305 Ga0495633_0000014 3300046558 Bacteria 261742
306 Ga0495633_0004452 3300046558 Bacteria 8909
307 Ga0495668_0000003 3300046616 Bacteria 695023
308 Ga0495668_0108270 3300046616 Bacteria 1520
309 Ga0495668_0187233 3300046616 Bacteria 1134
310 Ga0495625_0000005 3300046660 Bacteria 596135
311 Ga0495625_0003490 3300046660 Bacteria 15592
312 Ga0495625_0005138 3300046660 Bacteria 12082
313 Ga0495625_0044923 3300046660 Bacteria 3196
314 Ga0495661_0002958 3300046665 Bacteria 12832
315 Ga0495661_0005475 3300046665 Bacteria 9006
316 Ga0495658_0026946 3300046683 Bacteria 3087
317 Ga0495649_0000003 3300046694 Bacteria 880817
318 Ga0495660_0038272 3300046810 Bacteria 2667
319 Ga0495687_000762 3300047443 Bacteria 34827
320 Ga0495679_024137 3300047446 Bacteria 2053
321 Ga0495673_0035958 3300047469 Bacteria 2277
322 Ga0495686_0001067 3300047472 Bacteria 32642
323 Ga0495686_0004353 3300047472 Bacteria 11693
324 Ga0495686_0157203 3300047472 Bacteria 1331
325 Ga0495614_0016350 3300048089 Bacteria 3230
326 Ga0496116_0003232 3300048919 Bacteria 16228
327 Ga0496117_0002283 3300048920 Bacteria 24749
328 Ga0496122_0001345 3300048925 Bacteria 40096
329 Ga0496122_0013726 3300048925 Bacteria 7900
330 Ga0496123_0012073 3300048926 Bacteria 7409
331 Ga0495678_096224 3300049459 Bacteria 1034
332 Ga0495682_0023985 3300049460 Bacteria 2277
333 Ga0501241_002668 3300049758 Bacteria 3434
334 Ga0501241_010557 3300049758 Bacteria 1678
335 nmdc:mga0k408_1545_c1 3300050493 Bacteria 12427
336 nmdc:mga0k408_16_c1 3300050493 Bacteria 19854
337 Ga0500635_0001522 3300053080 Bacteria 5573
338 Ga0500635_0013442 3300053080 Bacteria 2378
339 Ga0500647_0114669 3300053091 Bacteria 1279
340 Ga0500651_0001275 3300053093 Bacteria 12577
341 Ga0500614_006724 3300053123 Bacteria 2419
342 Ga0500618_000526 3300053125 Bacteria 24101
343 Ga0500618_036724 3300053125 Bacteria 1134
344 Ga0500619_032706 3300053154 Bacteria 1596
345 Ga0500622_0000679 3300053156 Bacteria 30085
346 Ga0500624_000656 3300053157 Bacteria 8993
347 Ga0500634_0136116 3300053161 Bacteria 1171
348 Ga0587077_000453 3300059493 Bacteria 3515

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2977232053 2977232624 274
2 3300044684 Ga0466966_0277611 Ga0466966_0277611_126_998 280
3 3300013102 Ga0157371_10001338 Ga0157371_100013387 281
4 3300013105 Ga0157369_10139019 Ga0157369_101390192 281
5 3300005614 Ga0068856_100001806 Ga0068856_1000018065 282
6 3300026078 Ga0207702_10050013 Ga0207702_100500135 282
7 3300030731 Ga0316177_1022580 Ga0316177_10225802 283
8 3300030732 Ga0316176_1020373 Ga0316176_102037315 283
9 3300053156 Ga0500622_0000679 Ga0500622_0000679_28950_29861 283
10 3300025250 Ga0209026_1000361 Ga0209026_100036123 286
11 3300047472 Ga0495686_0001067 Ga0495686_0001067_23606_24523 288
12 3300005262 Ga0065165_1000152 Ga0065165_100015266 290
13 3300025292 Ga0209676_1002065 Ga0209676_100206513 290
14 iso_pu_bacteria 2522125168 2522548586 291
15 3300013306 Ga0163162_10000066 Ga0163162_1000006643 292
16 iso_pu_bacteria 2738541302 2738853863 292
17 iso_pu_bacteria 2739367656 2739616109 292
18 iso_pu_bacteria 2739367663 2739645136 292
19 iso_pu_bacteria 2842722452 2842723658 292
20 iso_pu_bacteria 2896344016 2896345071 292
21 iso_pu_bacteria 2902048731 2902049254 292
22 3300047472 Ga0495686_0004353 Ga0495686_0004353_3168_4082 293
23 iso_pu_bacteria 2721755487 2722728291 293
24 iso_pu_bacteria 2738541283 2738754829 293
25 iso_pu_bacteria 2738543023 2739305138 293
26 iso_pu_bacteria 2775506987 2776613401 293
27 iso_pu_bacteria 2842903701 2842906619 293
28 iso_pu_bacteria 2852627209 2852631976 293
29 iso_pu_bacteria 2857627736 2857629097 293
30 iso_pu_bacteria 2890737413 2890737932 293
31 iso_pu_bacteria 2898713307 2898715704 293
32 iso_pu_bacteria 2904780799 2904784870 293
33 iso_pu_bacteria 2919177583 2919178085 293
34 iso_pu_bacteria 2919186247 2919187057 293
35 iso_pu_bacteria 2939664404 2939665674 293
36 3300005435 Ga0070714_100155802 Ga0070714_1001558022 294
37 3300025929 Ga0207664_10137383 Ga0207664_101373832 294
38 iso_pu_bacteria 2896317667 2896318138 294
39 iso_pu_bacteria 3003233435 3003235291 294
40 iso_pu_bacteria 8055588893 8055589384 294
41 3300005466 Ga0070685_10006019 Ga0070685_100060195 295
42 3300005843 Ga0068860_100014560 Ga0068860_1000145608 295
43 3300028381 Ga0268264_10018753 Ga0268264_100187532 295
44 3300031731 Ga0307405_10048925 Ga0307405_100489251 295
45 3300032004 Ga0307414_10010822 Ga0307414_100108221 295
46 3300037471 Ga0395905_0000340 Ga0395905_0000340_35626_36537 295
47 3300045051 Ga0451576_0000020 Ga0451576_0000020_107591_108487 295
48 3300059493 Ga0587077_000453 Ga0587077_000453_1937_2848 295
49 3300003320 rootH2_10232232 rootH2_102322323 296
50 3300005614 Ga0068856_100000259 Ga0068856_10000025936 296
51 3300005614 Ga0068856_100007300 Ga0068856_1000073007 296
52 3300005614 Ga0068856_100023566 Ga0068856_1000235663 296
53 3300013100 Ga0157373_10006080 Ga0157373_100060805 296
54 3300013102 Ga0157371_10000009 Ga0157371_10000009154 296
55 3300013102 Ga0157371_10228657 Ga0157371_102286572 296
56 3300013104 Ga0157370_10000545 Ga0157370_100005459 296
57 3300013104 Ga0157370_10662483 Ga0157370_106624831 296
58 3300013105 Ga0157369_10000039 Ga0157369_1000003941 296
59 3300017792 Ga0163161_10000405 Ga0163161_1000040524 296
60 3300017792 Ga0163161_10040522 Ga0163161_100405221 296
61 3300017792 Ga0163161_10167343 Ga0163161_101673431 296
62 3300026078 Ga0207702_10000820 Ga0207702_100008207 296
63 3300026078 Ga0207702_10023253 Ga0207702_100232531 296
64 3300026078 Ga0207702_10056396 Ga0207702_100563963 296
65 3300032004 Ga0307414_10433430 Ga0307414_104334302 296
66 3300037312 Ga0395899_0000254 Ga0395899_0000254_30664_31572 296
67 3300044656 Ga0466969_0136778 Ga0466969_0136778_47_958 296
68 3300044684 Ga0466966_0021089 Ga0466966_0021089_1311_2222 296
69 3300045836 Ga0466958_0135013 Ga0466958_0135013_53_964 296
70 3300002773 JGI25152J39213_1000075 JGI25152J39213_100007541 297
71 3300002774 JGI25150J39212_1000009 JGI25150J39212_1000009110 297
72 3300003187 JGI25151J46595_10000017 JGI25151J46595_10000017110 297
73 3300003215 JGI25153J46596_10000023 JGI25153J46596_10000023129 297
74 3300003323 rootH1_10207941 rootH1_102079416 297
75 3300003781 Ga0055536_1000011 Ga0055536_100001178 297
76 3300003791 Ga0055530_10002397 Ga0055530_100023973 297
77 3300005288 Ga0065714_10002817 Ga0065714_100028172 297
78 3300005288 Ga0065714_10003488 Ga0065714_100034881 297
79 3300005288 Ga0065714_10005575 Ga0065714_100055753 297
80 3300005288 Ga0065714_10064511 Ga0065714_100645119 297
81 3300005288 Ga0065714_10065446 Ga0065714_1006544613 297
82 3300005288 Ga0065714_10112924 Ga0065714_101129242 297
83 3300005289 Ga0065704_10000288 Ga0065704_1000028817 297
84 3300005289 Ga0065704_10078585 Ga0065704_100785852 297
85 3300005338 Ga0068868_100343201 Ga0068868_1003432012 297
86 3300005563 Ga0068855_100086538 Ga0068855_1000865383 297
87 3300005563 Ga0068855_100145438 Ga0068855_1001454382 297
88 3300005614 Ga0068856_100161756 Ga0068856_1001617562 297
89 3300005614 Ga0068856_100237960 Ga0068856_1002379602 297
90 3300005614 Ga0068856_100376427 Ga0068856_1003764272 297
91 3300009148 Ga0105243_10000007 Ga0105243_10000007104 297
92 3300009545 Ga0105237_10013178 Ga0105237_100131783 297
93 3300009545 Ga0105237_10056920 Ga0105237_100569204 297
94 3300013100 Ga0157373_10000041 Ga0157373_1000004189 297
95 3300013100 Ga0157373_10003598 Ga0157373_1000359810 297
96 3300013102 Ga0157371_10002029 Ga0157371_1000202914 297
97 3300013102 Ga0157371_10078892 Ga0157371_100788921 297
98 3300013104 Ga0157370_10124228 Ga0157370_101242282 297
99 3300013104 Ga0157370_10197748 Ga0157370_101977481 297
100 3300013104 Ga0157370_10223583 Ga0157370_102235832 297
101 3300013104 Ga0157370_10272092 Ga0157370_102720922 297
102 3300013105 Ga0157369_10000006 Ga0157369_10000006262 297
103 3300013306 Ga0163162_10000178 Ga0163162_1000017812 297
104 3300013307 Ga0157372_10181841 Ga0157372_101818412 297
105 3300013307 Ga0157372_10290201 Ga0157372_102902013 297
106 3300014497 Ga0182008_10000001 Ga0182008_10000001238 297
107 3300014497 Ga0182008_10001546 Ga0182008_1000154618 297
108 3300014497 Ga0182008_10022396 Ga0182008_100223962 297
109 3300014497 Ga0182008_10071924 Ga0182008_100719241 297
110 3300014497 Ga0182008_10079064 Ga0182008_100790641 297
111 3300015261 Ga0182006_1000308 Ga0182006_100030831 297
112 3300015261 Ga0182006_1001272 Ga0182006_100127212 297
113 3300015261 Ga0182006_1047297 Ga0182006_10472972 297
114 3300015262 Ga0182007_10000001 Ga0182007_10000001211 297
115 3300015262 Ga0182007_10005992 Ga0182007_100059925 297
116 3300015682 Ga0183373_1006 Ga0183373_1006270 297
117 3300017792 Ga0163161_10000934 Ga0163161_100009348 297
118 3300017792 Ga0163161_10003366 Ga0163161_1000336612 297
119 3300025245 Ga0207425_1000007 Ga0207425_1000007446 297
120 3300025258 Ga0209129_1000006 Ga0209129_1000006446 297
121 3300025292 Ga0209676_1000001 Ga0209676_1000001875 297
122 3300025294 Ga0209025_1000025 Ga0209025_1000025276 297
123 3300025297 Ga0209758_1000016 Ga0209758_1000016446 297
124 3300025298 Ga0209050_1000016 Ga0209050_1000016541 297
125 3300025914 Ga0207671_10013089 Ga0207671_100130893 297
126 3300025914 Ga0207671_10035690 Ga0207671_100356904 297
127 3300025935 Ga0207709_10000033 Ga0207709_10000033203 297
128 3300026078 Ga0207702_10187089 Ga0207702_101870892 297
129 3300026078 Ga0207702_10198143 Ga0207702_101981432 297
130 3300030742 Ga0316183_1111132 Ga0316183_111113229 297
131 3300030744 Ga0316181_1115069 Ga0316181_11150693 297
132 3300031251 Ga0265327_10009643 Ga0265327_100096434 297
133 3300031548 Ga0307408_100000329 Ga0307408_10000032910 297
134 3300031548 Ga0307408_100001238 Ga0307408_10000123812 297
135 3300031548 Ga0307408_100002526 Ga0307408_1000025265 297
136 3300031731 Ga0307405_10000010 Ga0307405_10000010129 297
137 3300031731 Ga0307405_10051036 Ga0307405_100510362 297
138 3300031824 Ga0307413_10142358 Ga0307413_101423582 297
139 3300031903 Ga0307407_10000009 Ga0307407_10000009105 297
140 3300031911 Ga0307412_10000033 Ga0307412_1000003325 297
141 3300032002 Ga0307416_100000019 Ga0307416_10000001990 297
142 3300032002 Ga0307416_100063139 Ga0307416_1000631392 297
143 3300032004 Ga0307414_10001227 Ga0307414_100012274 297
144 3300032004 Ga0307414_10021746 Ga0307414_100217462 297
145 3300032004 Ga0307414_10028127 Ga0307414_100281272 297
146 3300032004 Ga0307414_10057488 Ga0307414_100574884 297
147 3300032004 Ga0307414_10074839 Ga0307414_100748392 297
148 3300032004 Ga0307414_10095391 Ga0307414_100953912 297
149 3300033179 Ga0307507_10002988 Ga0307507_1000298810 297
150 3300038443 Ga0395901_0000818 Ga0395901_0000818_11882_12796 297
151 3300046507 Ga0495606_0152542 Ga0495606_0152542_388_1302 297
152 3300046512 Ga0495610_0000028 Ga0495610_0000028_187505_188419 297
153 3300046512 Ga0495610_0005649 Ga0495610_0005649_1168_2082 297
154 3300048919 Ga0496116_0003232 Ga0496116_0003232_15145_16041 297
155 3300048920 Ga0496117_0002283 Ga0496117_0002283_8327_9223 297
156 3300048925 Ga0496122_0001345 Ga0496122_0001345_32877_33773 297
157 3300048925 Ga0496122_0013726 Ga0496122_0013726_3984_4880 297
158 3300048926 Ga0496123_0012073 Ga0496123_0012073_2897_3793 297
159 3300049758 Ga0501241_002668 Ga0501241_002668_691_1587 297
160 3300049758 Ga0501241_010557 Ga0501241_010557_666_1580 297
161 3300053093 Ga0500651_0001275 Ga0500651_0001275_7344_8258 297
162 3300053161 Ga0500634_0136116 Ga0500634_0136116_203_1117 297
163 iso_pu_bacteria 2585427687 2586206573 297
164 iso_pu_bacteria 2738541284 2738761255 297
165 iso_pu_bacteria 2739367651 2739588514 297
166 iso_pu_bacteria 2739367866 2740032826 297
167 iso_pu_bacteria 2818991437 2819549867 297
168 iso_pu_bacteria 2842909656 2842910164 297
169 iso_pu_bacteria 2849281842 2849285187 297
170 iso_pu_bacteria 2904445276 2904445805 297
171 iso_pu_bacteria 2945997725 2946000500 297
172 iso_pu_bacteria 2954016120 2954017397 297
173 3300003320 rootH2_10025162 rootH2_100251622 298
174 3300005327 Ga0070658_10000011 Ga0070658_10000011200 298
175 3300005328 Ga0070676_10000615 Ga0070676_100006155 298
176 3300005338 Ga0068868_100060727 Ga0068868_1000607272 298
177 3300005355 Ga0070671_100001785 Ga0070671_10000178516 298
178 3300005364 Ga0070673_100008914 Ga0070673_1000089144 298
179 3300005366 Ga0070659_100113466 Ga0070659_1001134663 298
180 3300005456 Ga0070678_100001439 Ga0070678_10000143911 298
181 3300005457 Ga0070662_100000068 Ga0070662_10000006864 298
182 3300005459 Ga0068867_100030943 Ga0068867_1000309434 298
183 3300005539 Ga0068853_100047108 Ga0068853_1000471082 298
184 3300005539 Ga0068853_100086738 Ga0068853_1000867383 298
185 3300005548 Ga0070665_100000003 Ga0070665_100000003489 298
186 3300005563 Ga0068855_100019393 Ga0068855_1000193936 298
187 3300005563 Ga0068855_100156096 Ga0068855_1001560964 298
188 3300005616 Ga0068852_100004264 Ga0068852_1000042645 298
189 3300005840 Ga0068870_10043486 Ga0068870_100434862 298
190 3300006237 Ga0097621_100000020 Ga0097621_10000002015 298
191 3300006358 Ga0068871_100000229 Ga0068871_1000002292 298
192 3300006881 Ga0068865_100000208 Ga0068865_1000002089 298
193 3300009093 Ga0105240_10043040 Ga0105240_100430405 298
194 3300009093 Ga0105240_10569343 Ga0105240_105693431 298
195 3300009098 Ga0105245_10592679 Ga0105245_105926792 298
196 3300009174 Ga0105241_10004485 Ga0105241_100044858 298
197 3300009176 Ga0105242_10082534 Ga0105242_100825344 298
198 3300009545 Ga0105237_10000356 Ga0105237_1000035632 298
199 3300009545 Ga0105237_10095111 Ga0105237_100951113 298
200 3300009551 Ga0105238_10127083 Ga0105238_101270832 298
201 3300010375 Ga0105239_10000002 Ga0105239_10000002582 298
202 3300013100 Ga0157373_10005557 Ga0157373_100055573 298
203 3300013102 Ga0157371_10025433 Ga0157371_100254331 298
204 3300013105 Ga0157369_10166543 Ga0157369_101665433 298
205 3300013296 Ga0157374_10000206 Ga0157374_1000020615 298
206 3300013296 Ga0157374_10001085 Ga0157374_1000108511 298
207 3300013296 Ga0157374_10032111 Ga0157374_100321113 298
208 3300013297 Ga0157378_10081516 Ga0157378_100815163 298
209 3300013307 Ga0157372_10180658 Ga0157372_101806582 298
210 3300013308 Ga0157375_10023411 Ga0157375_100234114 298
211 3300014745 Ga0157377_10014700 Ga0157377_100147002 298
212 3300025904 Ga0207647_10000820 Ga0207647_100008205 298
213 3300025907 Ga0207645_10000544 Ga0207645_100005445 298
214 3300025909 Ga0207705_10000015 Ga0207705_10000015197 298
215 3300025911 Ga0207654_10064956 Ga0207654_100649562 298
216 3300025913 Ga0207695_10002296 Ga0207695_1000229623 298
217 3300025913 Ga0207695_10122154 Ga0207695_101221541 298
218 3300025914 Ga0207671_10008174 Ga0207671_100081745 298
219 3300025927 Ga0207687_10393958 Ga0207687_103939582 298
220 3300025931 Ga0207644_10065831 Ga0207644_100658311 298
221 3300025932 Ga0207690_10083554 Ga0207690_100835543 298
222 3300025933 Ga0207706_10000126 Ga0207706_1000012635 298
223 3300025938 Ga0207704_10000209 Ga0207704_100002097 298
224 3300025949 Ga0207667_10017369 Ga0207667_100173692 298
225 3300025949 Ga0207667_10128051 Ga0207667_101280514 298
226 3300026041 Ga0207639_10014946 Ga0207639_100149464 298
227 3300026041 Ga0207639_10030522 Ga0207639_100305225 298
228 3300026089 Ga0207648_10004149 Ga0207648_1000414914 298
229 3300026121 Ga0207683_10002255 Ga0207683_100022557 298
230 3300026142 Ga0207698_10002540 Ga0207698_100025405 298
231 3300028379 Ga0268266_10000052 Ga0268266_1000005283 298
232 3300031507 Ga0307509_10078525 Ga0307509_100785252 298
233 3300037312 Ga0395899_0000608 Ga0395899_0000608_25487_26473 298
234 3300037312 Ga0395899_0034235 Ga0395899_0034235_2540_3436 298
235 3300037418 Ga0395900_0000330 Ga0395900_0000330_36651_37547 298
236 3300037418 Ga0395900_0185741 Ga0395900_0185741_98_994 298
237 3300037418 Ga0395900_0272332 Ga0395900_0272332_440_1417 298
238 3300037471 Ga0395905_0000301 Ga0395905_0000301_66667_67653 298
239 3300038443 Ga0395901_0002979 Ga0395901_0002979_8547_9443 298
240 3300038443 Ga0395901_0007093 Ga0395901_0007093_8740_9717 298
241 3300039447 Ga0436361_0683633 Ga0436361_0683633_5395_6291 298
242 3300047443 Ga0495687_000762 Ga0495687_000762_15840_16736 298
243 3300028794 Ga0307515_10000432 Ga0307515_1000043232 299
244 3300046558 Ga0495633_0000014 Ga0495633_0000014_253245_254159 299
245 3300046660 Ga0495625_0003490 Ga0495625_0003490_7569_8483 299
246 iso_pu_bacteria 2599185184 2599477669 300
247 iso_pu_bacteria 2852623160 2852623658 300
248 iso_pu_bacteria 2884933994 2884937439 300
249 iso_pu_bacteria 2919437846 2919441112 300
250 iso_pu_bacteria 2928078545 2928079582 300
251 iso_pu_bacteria 2928147474 2928147936 300
252 3300005327 Ga0070658_10300652 Ga0070658_103006522 301
253 3300025909 Ga0207705_10295721 Ga0207705_102957212 301
254 3300005329 Ga0070683_100026195 Ga0070683_1000261953 302
255 3300005339 Ga0070660_100007712 Ga0070660_1000077123 302
256 3300005366 Ga0070659_100000383 Ga0070659_10000038332 302
257 3300005535 Ga0070684_100121864 Ga0070684_1001218642 302
258 3300013100 Ga0157373_10000328 Ga0157373_1000032814 302
259 3300013307 Ga0157372_10012004 Ga0157372_100120044 302
260 3300025919 Ga0207657_10035452 Ga0207657_100354523 302
261 3300025932 Ga0207690_10003441 Ga0207690_100034415 302
262 3300025944 Ga0207661_10017023 Ga0207661_100170233 302
263 3300005455 Ga0070663_100079727 Ga0070663_1000797272 303
264 3300005539 Ga0068853_100460965 Ga0068853_1004609651 303
265 3300009093 Ga0105240_10072132 Ga0105240_100721323 303
266 3300009093 Ga0105240_10201374 Ga0105240_102013741 303
267 3300009093 Ga0105240_10324410 Ga0105240_103244102 303
268 3300009545 Ga0105237_10018786 Ga0105237_100187867 303
269 3300009545 Ga0105237_10043584 Ga0105237_100435844 303
270 3300009551 Ga0105238_10101445 Ga0105238_101014452 303
271 3300010375 Ga0105239_10000010 Ga0105239_10000010128 303
272 3300010375 Ga0105239_10007919 Ga0105239_100079194 303
273 3300013102 Ga0157371_10001251 Ga0157371_1000125115 303
274 3300013307 Ga0157372_10000001 Ga0157372_10000001321 303
275 3300025272 Ga0209455_1004579 Ga0209455_10045793 303
276 3300025913 Ga0207695_10040836 Ga0207695_100408363 303
277 3300025913 Ga0207695_10328291 Ga0207695_103282912 303
278 3300025914 Ga0207671_10012593 Ga0207671_100125932 303
279 3300025914 Ga0207671_10049165 Ga0207671_100491652 303
280 3300028786 Ga0307517_10005359 Ga0307517_1000535917 303
281 3300031548 Ga0307408_100086419 Ga0307408_1000864192 303
282 3300031731 Ga0307405_10097122 Ga0307405_100971221 303
283 3300031995 Ga0307409_100035512 Ga0307409_1000355122 303
284 3300032002 Ga0307416_100001967 Ga0307416_1000019675 303
285 3300032005 Ga0307411_10311401 Ga0307411_103114011 303
286 3300033180 Ga0307510_10016554 Ga0307510_100165543 303
287 3300037312 Ga0395899_0000735 Ga0395899_0000735_1143_2054 303
288 3300046506 Ga0495583_0105884 Ga0495583_0105884_34_1047 303
289 3300046518 Ga0495631_0005644 Ga0495631_0005644_4010_4921 303
290 3300046529 Ga0495652_0046989 Ga0495652_0046989_499_1410 303
291 3300046616 Ga0495668_0108270 Ga0495668_0108270_585_1496 303
292 3300046665 Ga0495661_0002958 Ga0495661_0002958_6451_7362 303
293 3300047472 Ga0495686_0157203 Ga0495686_0157203_134_1045 303
294 3300050493 nmdc:mga0k408_1545_c1 nmdc:mga0k408_1545_c1_9084_9995 303
295 3300001904 JGI24736J21556_1013517 JGI24736J21556_10135172 304
296 3300001989 JGI24739J22299_10020078 JGI24739J22299_100200782 304
297 3300001990 JGI24737J22298_10000149 JGI24737J22298_1000014916 304
298 3300002067 JGI24735J21928_10000014 JGI24735J21928_1000001423 304
299 3300002737 JGI25162J39368_1000020 JGI25162J39368_1000020178 304
300 3300002737 JGI25162J39368_1001098 JGI25162J39368_10010985 304
301 3300003214 JGI25165J46597_1000898 JGI25165J46597_10008983 304
302 3300003316 rootH1_10025788 rootH1_100257887 304
303 3300003320 rootH2_10017200 rootH2_100172002 304
304 3300003320 rootH2_10059243 rootH2_100592438 304
305 3300003323 rootH1_10012846 rootH1_100128465 304
306 3300005327 Ga0070658_10032672 Ga0070658_100326725 304
307 3300005327 Ga0070658_10349819 Ga0070658_103498191 304
308 3300005366 Ga0070659_100009256 Ga0070659_1000092562 304
309 3300005458 Ga0070681_10023791 Ga0070681_100237917 304
310 3300005530 Ga0070679_100011654 Ga0070679_1000116546 304
311 3300005563 Ga0068855_100000042 Ga0068855_10000004292 304
312 3300005563 Ga0068855_100000652 Ga0068855_10000065229 304
313 3300005563 Ga0068855_100075273 Ga0068855_1000752734 304
314 3300005577 Ga0068857_100010370 Ga0068857_1000103702 304
315 3300005614 Ga0068856_100125095 Ga0068856_1001250952 304
316 3300009093 Ga0105240_10000068 Ga0105240_100000689 304
317 3300009093 Ga0105240_10145499 Ga0105240_101454992 304
318 3300009093 Ga0105240_10178185 Ga0105240_101781851 304
319 3300009545 Ga0105237_10000274 Ga0105237_100002749 304
320 3300009545 Ga0105237_10059768 Ga0105237_100597683 304
321 3300009545 Ga0105237_10089313 Ga0105237_100893132 304
322 3300009551 Ga0105238_10129005 Ga0105238_101290052 304
323 3300010375 Ga0105239_10000081 Ga0105239_1000008145 304
324 3300010375 Ga0105239_10000259 Ga0105239_1000025949 304
325 3300010375 Ga0105239_10008945 Ga0105239_100089459 304
326 3300013100 Ga0157373_10017756 Ga0157373_100177563 304
327 3300013102 Ga0157371_10001189 Ga0157371_1000118921 304
328 3300013102 Ga0157371_10110352 Ga0157371_101103522 304
329 3300013105 Ga0157369_10024387 Ga0157369_100243875 304
330 3300013105 Ga0157369_10389288 Ga0157369_103892881 304
331 3300013306 Ga0163162_10001561 Ga0163162_1000156117 304
332 3300013306 Ga0163162_10014096 Ga0163162_100140967 304
333 3300013307 Ga0157372_10000372 Ga0157372_100003725 304
334 3300013307 Ga0157372_10008550 Ga0157372_100085507 304
335 3300017792 Ga0163161_10044449 Ga0163161_100444492 304
336 3300025230 Ga0209563_106082 Ga0209563_1060822 304
337 3300025231 Ga0207427_100163 Ga0207427_1001635 304
338 3300025233 Ga0209437_100085 Ga0209437_10008531 304
339 3300025233 Ga0209437_100101 Ga0209437_100101221 304
340 3300025261 Ga0209233_1000124 Ga0209233_100012417 304
341 3300025261 Ga0209233_1014647 Ga0209233_10146473 304
342 3300025904 Ga0207647_10001459 Ga0207647_1000145916 304
343 3300025913 Ga0207695_10000131 Ga0207695_100001319 304
344 3300025913 Ga0207695_10159377 Ga0207695_101593773 304
345 3300025914 Ga0207671_10000993 Ga0207671_100009939 304
346 3300025914 Ga0207671_10008258 Ga0207671_100082582 304
347 3300025914 Ga0207671_10030641 Ga0207671_100306412 304
348 3300025921 Ga0207652_10003351 Ga0207652_100033512 304
349 3300025924 Ga0207694_10146928 Ga0207694_101469283 304
350 3300025949 Ga0207667_10000037 Ga0207667_10000037186 304
351 3300025949 Ga0207667_10001001 Ga0207667_1000100121 304
352 3300025949 Ga0207667_10127119 Ga0207667_101271193 304
353 3300028794 Ga0307515_10136445 Ga0307515_101364451 304
354 3300037312 Ga0395899_0000001 Ga0395899_0000001_1727609_1728544 304
355 3300046471 Ga0495650_0000003 Ga0495650_0000003_159621_160535 304
356 3300046492 Ga0495585_0000085 Ga0495585_0000085_69638_70552 304
357 3300046492 Ga0495585_0003908 Ga0495585_0003908_8273_9187 304
358 3300046507 Ga0495606_0000145 Ga0495606_0000145_120323_121237 304
359 3300046507 Ga0495606_0014997 Ga0495606_0014997_4780_5694 304
360 3300046512 Ga0495610_0003550 Ga0495610_0003550_5381_6295 304
361 3300046520 Ga0495637_0029957 Ga0495637_0029957_94_1008 304
362 3300046524 Ga0495648_0008324 Ga0495648_0008324_5183_6097 304
363 3300046538 Ga0495609_0004504 Ga0495609_0004504_339_1253 304
364 3300046557 Ga0495622_0081807 Ga0495622_0081807_405_1319 304
365 3300046558 Ga0495633_0004452 Ga0495633_0004452_6423_7337 304
366 3300046616 Ga0495668_0000003 Ga0495668_0000003_595719_596633 304
367 3300046616 Ga0495668_0187233 Ga0495668_0187233_200_1114 304
368 3300046660 Ga0495625_0000005 Ga0495625_0000005_276641_277555 304
369 3300046660 Ga0495625_0005138 Ga0495625_0005138_8293_9207 304
370 3300046660 Ga0495625_0044923 Ga0495625_0044923_2050_2964 304
371 3300046665 Ga0495661_0005475 Ga0495661_0005475_3842_4756 304
372 3300046683 Ga0495658_0026946 Ga0495658_0026946_958_1872 304
373 3300046694 Ga0495649_0000003 Ga0495649_0000003_276631_277545 304
374 3300046810 Ga0495660_0038272 Ga0495660_0038272_1666_2580 304
375 3300047446 Ga0495679_024137 Ga0495679_024137_701_1615 304
376 3300047469 Ga0495673_0035958 Ga0495673_0035958_51_965 304
377 3300048089 Ga0495614_0016350 Ga0495614_0016350_1054_1968 304
378 3300049459 Ga0495678_096224 Ga0495678_096224_101_1015 304
379 3300049460 Ga0495682_0023985 Ga0495682_0023985_355_1269 304
380 3300050493 nmdc:mga0k408_16_c1 nmdc:mga0k408_16_c1_7941_8855 304
381 3300053080 Ga0500635_0001522 Ga0500635_0001522_3382_4296 304
382 3300053080 Ga0500635_0013442 Ga0500635_0013442_604_1518 304
383 3300053091 Ga0500647_0114669 Ga0500647_0114669_256_1170 304
384 3300053123 Ga0500614_006724 Ga0500614_006724_689_1603 304
385 3300053125 Ga0500618_000526 Ga0500618_000526_18589_19503 304
386 3300053125 Ga0500618_036724 Ga0500618_036724_149_1063 304
387 3300053154 Ga0500619_032706 Ga0500619_032706_650_1564 304
388 3300053157 Ga0500624_000656 Ga0500624_000656_8014_8928 304
389 iso_pu_bacteria 2932082852 2932086785 304

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01218

Coprogen_oxidas

Coproporphyrinogen III oxidase

40

337

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dwr-assembly1.cif.gz_B leishmania major coproporphyrinogen iii oxidase with bound ligand 0.9621 5 304
3ejo-assembly1.cif.gz_A coproporphyrinogen iii oxidase from leishmania donovani 0.9566 5 304
1vju-assembly1.cif.gz_A coproporphyrinogen iii oxidase from leishmania major 0.9564 5 304
3dwr-assembly1.cif.gz_A leishmania major coproporphyrinogen iii oxidase with bound ligand 0.9563 5 304
8t7w-assembly1.cif.gz_A crystal structure of oxygen-dependent coproporphyrinogen-iii oxidase (hemf) from klebsiella aerogenes 0.9549 5 304
ID Description Score Start End Superfamily
3dwsA00 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.948 5 304 3.40.1500.10
af_Q7XPL2_53_398_3.40.1500.10 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.9329 5 304 3.40.1500.10
3dwsA00 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.9295 5 304 3.40.1500.10
af_Q93Z96_46_233_3.40.1500.10 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.9212 6 147 3.40.1500.10
af_Q7XPL2_53_398_3.40.1500.10 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.918 5 304 3.40.1500.10
ID Description Score Start End GO Terms
AF-A0A4Q3DBB0-F1-model_v4 coproporphyrinogen oxidase (EC 1.3.3.3) 0.9929 1 239 GO:0004109
GO:0005737
GO:0006782
AF-A0A4Q3DBB0-F1-model_v4 coproporphyrinogen oxidase (EC 1.3.3.3) 0.9847 1 239 GO:0004109
GO:0005737
GO:0006782
AF-A0A261QBE1-F1-model_v4 coproporphyrinogen oxidase (EC 1.3.3.3) 0.9668 1 304 GO:0004109
GO:0005737
GO:0006782
AF-A0A800A733-F1-model_v4 coproporphyrinogen oxidase (EC 1.3.3.3) 0.9638 1 258 GO:0004109
GO:0005737
GO:0006782
AF-A0A261QBE1-F1-model_v4 coproporphyrinogen oxidase (EC 1.3.3.3) 0.9636 1 304 GO:0004109
GO:0005737
GO:0006782

Feature Viewer

pLDDT pTM Quality
90.87 0.9 High
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Predicted Structure (AlphaFold2)

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