F429770

General Info

Members Datasets Scaffolds Average Seq Length
383 365 95 664

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8057132660|8057132964
Length 703
Sequence VQTAPSGGFFMPEGQQEGWGGQMFKKILIANRGEIACRVIKTARRMGIATVAVYSDADRNALHVKMADEAVHIGPSPANQSYIVIDKIMDAIRQTGAEAVHPGYGFLSENRKFAEALEAEGVVFIGPPSGAIEAMGDKITSKKIAAEAGVSTVPGHMGLIADADEAARISADIGYPVMIKASAGGGGKGMRIAWNDDEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLADQHGNAVYLHERECSIQRRNQKVIEEAPSPFLDEATRAAMGAQAVALAKAVGYTSAGTVEFIVDGQRNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGEPLPFAQSDLKITGWAMESRLYAEDPYRGFLPSIGRLTRYRPPVEVAAGPMLVEGKWLAQGAPQGPAAVRNDTGVYEGGEISMFYDPMIAKLCTWAPDRAQAIEAMRVALDRFEVEGIGHNLPFLSAVMDHPKFVSGDITTAFIAEEYPEGFQGASLGVDEMERVAAAAAAMHRVAEIRRTRISGRLSNHERHVGENWVVFAGGREWPVRIEADRDGAMVHLNGRAMRVESDWRPGQSLALIEVDGKPLVLKVDKIPAGLRLRTRGADLAVHVRRPRAAELARLMPEKLPPDTSKFLLCPMPGLVVRINVEAGDEVQEGQALATVEAMKMENILRAERRGVVRSVNAAPGESLKVDDVIMEFE

Samples

Sample ID Description Type Environment
1 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
2 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
3 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
4 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
5 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
6 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
7 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
8 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
9 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
10 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
11 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
12 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
13 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
14 2516143018 Ensifer sp. BR816 Isolate Nodule
15 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
16 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
17 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
18 2534681786 Brucella suis 92/29 Isolate Unclassified
19 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
20 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
21 2551306086 Sinorhizobium meliloti AK11 Isolate Nodule
22 2551306087 Sinorhizobium meliloti A0643DD Isolate Nodule
23 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
24 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
25 2551306091 Sinorhizobium meliloti C0431A Isolate Nodule
26 2551306092 Sinorhizobium meliloti AK75 Isolate Nodule
27 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
28 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
29 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
30 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
31 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
32 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
33 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
34 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
35 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
36 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
37 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
38 2643221557 Ensifer sp. Root558 Isolate Unclassified
39 2643221568 Rhizobium sp. Root564 Isolate Unclassified
40 2643221582 Rhizobium sp. Root651 Isolate Unclassified
41 2643221607 Rhizobium sp. Root73 Isolate Unclassified
42 2643221610 Ensifer sp. Root74 Isolate Unclassified
43 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
44 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
45 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
46 2643221668 Ensifer sp. Root423 Isolate Unclassified
47 2643221675 Ensifer sp. Root1298 Isolate Unclassified
48 2643221680 Ensifer sp. Root1312 Isolate Unclassified
49 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
50 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
51 2643221693 Rhizobium sp. Root491 Isolate Unclassified
52 2643221719 Rhizobium sp. Root274 Isolate Unclassified
53 2643221723 Ensifer sp. Root278 Isolate Unclassified
54 2643221726 Ensifer sp. Root954 Isolate Unclassified
55 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
56 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
57 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
58 2738543024 Aminobacter sp. AP02 Isolate Unclassified
59 2751185800 Brucella pituitosa AA2 Isolate Unclassified
60 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
61 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
62 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
63 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
64 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
65 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
66 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
67 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
68 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
69 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
70 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
71 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
72 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
73 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
74 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
75 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
76 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
77 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
78 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
79 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
80 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
81 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
82 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
83 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
84 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
85 2854911287 Brucella lupini LUP21 Isolate Unclassified
86 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
87 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
88 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
89 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
90 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
91 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
92 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
93 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
94 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
95 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
96 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
97 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
98 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
99 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
100 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
101 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
102 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
103 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
104 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
105 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
106 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
107 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
108 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
109 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
110 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
111 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
112 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
113 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
114 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
115 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
116 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
117 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
118 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
119 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
120 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
121 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
122 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
123 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
124 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
125 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
126 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
127 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
128 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
129 2924179722 Sinorhizobium meliloti USDA1280 Isolate Nodule
130 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
131 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
132 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
133 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
134 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
135 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
136 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
137 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
138 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
139 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
140 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
141 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
142 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
143 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
144 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
145 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
146 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
147 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
148 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
149 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
150 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
151 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
152 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
153 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
154 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
155 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
156 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
157 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
158 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
159 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
160 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
161 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
162 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
163 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
164 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
165 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
166 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
167 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
168 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
169 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
170 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
171 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
172 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
173 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
174 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
175 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
176 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
177 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
178 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
179 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
180 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
181 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
182 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
183 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
184 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
185 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
186 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
187 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
188 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
189 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
190 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
191 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
192 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
193 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
194 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
195 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
196 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
197 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
198 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
199 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
200 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
201 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
202 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
203 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
204 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
205 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
206 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
207 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
208 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
209 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
210 2964705432 Sinorhizobium meliloti USDA1614 Isolate Nodule
211 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
212 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
213 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
214 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
215 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
216 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
217 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
218 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
219 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
220 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
221 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
222 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
223 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
224 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
225 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
226 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
227 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
228 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
229 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
230 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
231 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
232 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
233 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
234 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
235 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
236 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
237 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
238 2970082768 Sinorhizobium meliloti USDA1803 Isolate Nodule
239 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
240 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
241 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
242 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
243 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
244 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
245 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
246 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
247 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
248 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
249 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
250 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
251 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
252 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
253 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
254 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
255 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
256 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
257 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
258 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
259 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
260 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
261 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
262 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
263 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
264 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
265 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
266 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
267 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
268 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
269 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
270 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
271 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
272 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
273 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
274 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
275 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
276 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
277 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
278 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
279 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
280 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
281 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
282 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
283 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
284 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
285 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
286 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
287 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
288 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
289 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
290 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
291 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
292 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
293 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
294 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
295 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
296 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
297 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
298 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
299 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
300 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
301 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
302 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
303 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
304 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
305 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
306 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
307 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
308 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
309 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
310 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
311 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
312 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
313 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
314 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
315 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
316 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
317 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
318 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
319 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
320 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
321 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
322 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
323 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
324 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
325 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
326 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
327 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
328 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
329 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
330 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
331 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
332 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
333 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
334 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
335 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
336 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
337 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
338 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
339 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
340 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
341 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
342 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
343 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
344 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
345 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
346 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
347 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
348 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
349 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
350 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
351 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
352 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
353 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
354 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
355 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
356 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
357 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
358 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
359 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
360 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
361 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
362 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
363 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
364 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere
365 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 25.07
Metatranscriptomes 0
Isolates 74.93

Biome Distribution

Category Percentage (%)
Aerial Root 0.26
Bulb 0
Endosphere 8.36
Nodule 59.53
Rhizoplane 0.78
Rhizosphere 12.01
Stem 0
Stem Tuber 0.26
Unclassified 18.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000109 3300002737 Bacteria 89947
2 JGI25165J46597_1000597 3300003214 Bacteria 30973
3 Ga0055542_1000810 3300003762 Bacteria 23000
4 Ga0055526_1000835 3300003771 Bacteria 23023
5 Ga0055540_1000263 3300003792 Bacteria 47496
6 Ga0070662_100009497 3300005457 Bacteria 6361
7 Ga0070665_100005923 3300005548 Bacteria 12523
8 Ga0068863_100021751 3300005841 Bacteria 6119
9 Ga0081455_10006441 3300005937 Bacteria 12582
10 Ga0075365_10009899 3300006038 Bacteria 5519
11 Ga0075368_10000638 3300006042 Bacteria 10633
12 Ga0075363_100000089 3300006048 Bacteria 19847
13 Ga0075362_10000498 3300006177 Bacteria 11473
14 Ga0075367_10023294 3300006178 Bacteria 3482
15 Ga0079104_1003113 3300006946 Bacteria 8069
16 Ga0105239_10000065 3300010375 Bacteria 151224
17 Ga0105239_10016963 3300010375 Bacteria 8049
18 Ga0157371_10000002 3300013102 Bacteria 665040
19 Ga0171463_1013 3300013249 Bacteria 94945
20 Ga0183363_1243 3300015690 Bacteria 9557
21 Ga0214544_1000329 3300021320 Bacteria 82143
22 Ga0214542_1000084 3300021321 Bacteria 120499
23 Ga0214543_1000076 3300021327 Bacteria 120483
24 Ga0228711_1000020 3300022739 Bacteria 108422
25 Ga0228710_1000012 3300022740 Bacteria 148650
26 Ga0209437_100064 3300025233 Bacteria 334360
27 Ga0209148_1000126 3300025254 Bacteria 181590
28 Ga0209233_1000081 3300025261 Bacteria 336832
29 Ga0209455_1000280 3300025272 Bacteria 55431
30 Ga0209025_1000534 3300025294 Bacteria 72165
31 Ga0209025_1000581 3300025294 Bacteria 66321
32 Ga0209564_1000147 3300025295 Bacteria 172628
33 Ga0209050_1003647 3300025298 Bacteria 11127
34 Ga0209256_1000509 3300025299 Bacteria 57170
35 Ga0209256_1001077 3300025299 Bacteria 31547
36 Ga0209051_1000032 3300025303 Bacteria 383445
37 Ga0207707_10054900 3300025912 Bacteria 3467
38 Ga0207660_10084651 3300025917 Bacteria 2337
39 Ga0207657_10017239 3300025919 Bacteria 6935
40 Ga0207652_10082251 3300025921 Bacteria 2817
41 Ga0207706_10004377 3300025933 Bacteria 13275
42 Ga0207667_10031143 3300025949 Bacteria 5761
43 Ga0207639_10094241 3300026041 Bacteria 2403
44 Ga0207674_10011292 3300026116 Bacteria 10038
45 Ga0209281_1000138 3300027111 Bacteria 180979
46 Ga0209281_1000591 3300027111 Bacteria 41961
47 Ga0209282_1000020 3300027666 Bacteria 180986
48 Ga0209813_10001012 3300027866 Bacteria 6314
49 Ga0268266_10006707 3300028379 Bacteria 10503
50 Ga0307515_10004268 3300028794 Bacteria 29669
51 Ga0307513_10000302 3300031456 Bacteria 70793
52 Ga0316576_10019947 3300031727 Bacteria 4601
53 Ga0315914_1000031 3300031967 Bacteria 101407
54 Ga0315913_1000010 3300033430 Bacteria 140890
55 Ga0315915_1000006 3300033464 Bacteria 330709
56 Ga0395905_0000374 3300037471 Bacteria 63889
57 Ga0451576_0010755 3300045051 Bacteria 10473
58 Ga0495638_0002741 3300046460 Bacteria 14152
59 Ga0495610_0002773 3300046512 Bacteria 14360
60 Ga0495648_0001499 3300046524 Bacteria 22847
61 Ga0495669_0011743 3300046684 Bacteria 3723
62 Ga0495686_0003661 3300047472 Bacteria 13153
63 Ga0496104_0157451 3300048907 Bacteria 2180
64 Ga0496116_0000026 3300048919 Bacteria 450803
65 Ga0496117_0000016 3300048920 Bacteria 523642
66 Ga0496117_0064972 3300048920 Bacteria 2484
67 Ga0496118_0004538 3300048921 Bacteria 16389
68 Ga0496119_0000504 3300048922 Bacteria 53242
69 Ga0496119_0012552 3300048922 Bacteria 6867
70 Ga0496120_0000164 3300048923 Bacteria 111959
71 Ga0496120_0001818 3300048923 Bacteria 23870
72 Ga0496121_0002955 3300048924 Bacteria 24780
73 Ga0496122_0000002 3300048925 Bacteria 905834
74 Ga0496122_0000426 3300048925 Bacteria 89190
75 Ga0496122_0014678 3300048925 Bacteria 7554
76 Ga0496122_0025422 3300048925 Bacteria 5141
77 Ga0496122_0043994 3300048925 Bacteria 3492
78 Ga0496123_0000002 3300048926 Bacteria 1811682
79 Ga0496123_0000380 3300048926 Bacteria 83326
80 Ga0496125_0003236 3300048928 Bacteria 20084
81 Ga0496125_0041972 3300048928 Bacteria 3903
82 Ga0496125_0073091 3300048928 Bacteria 2668
83 Ga0496126_0000069 3300048929 Bacteria 246935
84 Ga0496126_0051207 3300048929 Bacteria 3760
85 Ga0495678_000598 3300049459 Bacteria 33954
86 nmdc:mga03n38_785_c1 3300050490 Bacteria 8440
87 nmdc:mga00v17_13_c1 3300050491 Bacteria 128511
88 nmdc:mga0yw44_16860_c1 3300050492 Bacteria 3957
89 nmdc:mga0sz30_356_c1 3300050516 Bacteria 17395
90 Ga0500578_0003007 3300053086 Bacteria 13076
91 Ga0500618_000664 3300053125 Bacteria 20351
92 Ga0500561_0000190 3300053137 Bacteria 11104
93 Ga0500573_0023696 3300053140 Bacteria 3526
94 Ga0500636_0000038 3300053177 Bacteria 70653
95 Ga0500636_0006559 3300053177 Bacteria 6684

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048907 Ga0496104_0157451 Ga0496104_0157451_460_2169 541
2 3300005937 Ga0081455_10006441 Ga0081455_100064415 613
3 3300021320 Ga0214544_1000329 Ga0214544_100032951 622
4 3300021321 Ga0214542_1000084 Ga0214542_100008451 622
5 3300021327 Ga0214543_1000076 Ga0214543_100007651 622
6 3300053086 Ga0500578_0003007 Ga0500578_0003007_31_1977 622
7 3300048929 Ga0496126_0051207 Ga0496126_0051207_546_2561 628
8 3300028794 Ga0307515_10004268 Ga0307515_100042681 632
9 3300025294 Ga0209025_1000534 Ga0209025_100053463 633
10 3300046684 Ga0495669_0011743 Ga0495669_0011743_1188_3167 633
11 iso_pu_bacteria 2582581279 2585146927 634
12 iso_pu_bacteria 2643221545 2643750818 635
13 iso_pu_bacteria 2643221691 2644509892 635
14 3300005457 Ga0070662_100009497 Ga0070662_1000094977 637
15 3300025912 Ga0207707_10054900 Ga0207707_100549003 637
16 3300025917 Ga0207660_10084651 Ga0207660_100846512 637
17 3300025919 Ga0207657_10017239 Ga0207657_100172392 637
18 3300025921 Ga0207652_10082251 Ga0207652_100822512 637
19 3300025933 Ga0207706_10004377 Ga0207706_1000437714 637
20 3300025949 Ga0207667_10031143 Ga0207667_100311437 637
21 3300026041 Ga0207639_10094241 Ga0207639_100942411 637
22 3300026116 Ga0207674_10011292 Ga0207674_100112925 637
23 iso_pu_bacteria 2558860983 2561467809 637
24 iso_pu_bacteria 3000405567 3000406488 637
25 iso_pu_bacteria 8055431914 8055433879 637
26 3300046512 Ga0495610_0002773 Ga0495610_0002773_12224_14218 638
27 3300046524 Ga0495648_0001499 Ga0495648_0001499_624_2618 638
28 3300047472 Ga0495686_0003661 Ga0495686_0003661_870_2864 638
29 3300049459 Ga0495678_000598 Ga0495678_000598_15762_17756 638
30 iso_pu_bacteria 2713897090 2715499228 638
31 iso_pu_bacteria 2834578030 2834581579 638
32 iso_pu_bacteria 2855020534 2855021663 638
33 iso_pu_bacteria 2898795034 2898797438 638
34 iso_pu_bacteria 2899259804 2899259878 638
35 iso_pu_bacteria 2899275550 2899277527 638
36 3300046460 Ga0495638_0002741 Ga0495638_0002741_10238_12247 639
37 iso_pu_bacteria 2534681786 2535484906 639
38 iso_pu_bacteria 2554235003 2554245320 639
39 iso_pu_bacteria 2558860242 2559296850 639
40 iso_pu_bacteria 2582581283 2585166945 639
41 iso_pu_bacteria 2599185352 2600196756 639
42 iso_pu_bacteria 2643221551 2643777543 639
43 iso_pu_bacteria 2643221555 2643795991 639
44 iso_pu_bacteria 2643221557 2643806440 639
45 iso_pu_bacteria 2643221568 2643853847 639
46 iso_pu_bacteria 2643221582 2643917065 639
47 iso_pu_bacteria 2643221607 2644048771 639
48 iso_pu_bacteria 2643221610 2644067337 639
49 iso_pu_bacteria 2643221623 2644130772 639
50 iso_pu_bacteria 2643221636 2644201907 639
51 iso_pu_bacteria 2643221668 2644380108 639
52 iso_pu_bacteria 2643221675 2644418425 639
53 iso_pu_bacteria 2643221680 2644451792 639
54 iso_pu_bacteria 2643221686 2644481572 639
55 iso_pu_bacteria 2643221693 2644520978 639
56 iso_pu_bacteria 2643221723 2644674656 639
57 iso_pu_bacteria 2643221726 2644687219 639
58 iso_pu_bacteria 2690316117 2692319342 639
59 iso_pu_bacteria 2738543024 2739305890 639
60 iso_pu_bacteria 2751185821 2753463166 639
61 iso_pu_bacteria 2758568016 2758641789 639
62 iso_pu_bacteria 2791355091 2792621450 639
63 iso_pu_bacteria 2791355092 2792627862 639
64 iso_pu_bacteria 2808606387 2808987307 639
65 iso_pu_bacteria 2838074704 2838075856 639
66 iso_pu_bacteria 2842509118 2842515146 639
67 iso_pu_bacteria 2847417321 2847422152 639
68 iso_pu_bacteria 2848992105 2848998352 639
69 iso_pu_bacteria 2854681122 2854683928 639
70 iso_pu_bacteria 2854896431 2854901060 639
71 iso_pu_bacteria 2854911287 2854912123 639
72 iso_pu_bacteria 2855839649 2855843430 639
73 iso_pu_bacteria 2869278585 2869279150 639
74 iso_pu_bacteria 2896384573 2896388312 639
75 iso_pu_bacteria 2899845264 2899845613 639
76 iso_pu_bacteria 2913295892 2913296567 639
77 iso_pu_bacteria 2915986958 2915987848 639
78 iso_pu_bacteria 2916014648 2916018595 639
79 iso_pu_bacteria 2919166419 2919168322 639
80 iso_pu_bacteria 2920760137 2920764420 639
81 iso_pu_bacteria 2921208531 2921211079 639
82 iso_pu_bacteria 2921296804 2921298851 639
83 iso_pu_bacteria 2924144063 2924148180 639
84 iso_pu_bacteria 2924165586 2924168916 639
85 iso_pu_bacteria 2924172951 2924173146 639
86 iso_pu_bacteria 2924179722 2924179724 639
87 iso_pu_bacteria 2924186466 2924188357 639
88 iso_pu_bacteria 2924200457 2924204125 639
89 iso_pu_bacteria 2924214083 2924215696 639
90 iso_pu_bacteria 2926760298 2926763806 639
91 iso_pu_bacteria 2937972304 2937972688 639
92 iso_pu_bacteria 2958041894 2958050205 639
93 iso_pu_bacteria 2970593180 2970593745 639
94 iso_pu_bacteria 2978969890 2978970943 639
95 iso_pu_bacteria 2979095461 2979096676 639
96 iso_pu_bacteria 2984587000 2984588051 639
97 iso_pu_bacteria 2996310559 2996316382 639
98 iso_pu_bacteria 3000017691 3000017777 639
99 iso_pu_bacteria 650716007 650843273 639
100 iso_pu_bacteria 8002285264 8002291996 639
101 iso_pu_bacteria 8003570095 8003572848 639
102 iso_pu_bacteria 8023680758 8023683586 639
103 3300025299 Ga0209256_1000509 Ga0209256_10005097 640
104 iso_pu_bacteria 2510461069 2510842946 640
105 iso_pu_bacteria 2617270742 2617382103 640
106 iso_pu_bacteria 2643221653 2644299401 640
107 iso_pu_bacteria 2643221719 2644657629 640
108 iso_pu_bacteria 2775507049 2776914767 640
109 iso_pu_bacteria 2775507266 2778173544 640
110 iso_pu_bacteria 2791355253 2793281292 640
111 iso_pu_bacteria 2818991272 2819243972 640
112 iso_pu_bacteria 2842482326 2842484397 640
113 iso_pu_bacteria 2989776772 2989780509 640
114 iso_pu_bacteria 8005246636 8005250325 640
115 iso_pu_bacteria 8056875544 8056878513 640
116 iso_pu_bacteria 2915650412 2915654085 641
117 iso_pu_bacteria 2995392953 2995396085 641
118 3300005841 Ga0068863_100021751 Ga0068863_1000217514 642
119 3300006946 Ga0079104_1003113 Ga0079104_10031133 642
120 3300022739 Ga0228711_1000020 Ga0228711_100002040 642
121 3300022740 Ga0228710_1000012 Ga0228710_100001268 642
122 3300027111 Ga0209281_1000138 Ga0209281_1000138122 642
123 3300027111 Ga0209281_1000591 Ga0209281_100059121 642
124 3300027666 Ga0209282_1000020 Ga0209282_1000020122 642
125 3300031727 Ga0316576_10019947 Ga0316576_100199472 642
126 3300031967 Ga0315914_1000031 Ga0315914_100003135 642
127 3300033430 Ga0315913_1000010 Ga0315913_100001065 642
128 3300033464 Ga0315915_1000006 Ga0315915_10000064 642
129 3300053177 Ga0500636_0006559 Ga0500636_0006559_458_2458 642
130 iso_pu_bacteria 2510065057 2510305759 642
131 iso_pu_bacteria 2511231052 2511497487 642
132 iso_pu_bacteria 2512047086 2512529937 642
133 iso_pu_bacteria 2512875026 2512969836 642
134 iso_pu_bacteria 2513237086 2513581909 642
135 iso_pu_bacteria 2513237089 2513603006 642
136 iso_pu_bacteria 2513237091 2513615279 642
137 iso_pu_bacteria 2513237140 2513884639 642
138 iso_pu_bacteria 2513237143 2513901365 642
139 iso_pu_bacteria 2513237156 2513984352 642
140 iso_pu_bacteria 2513237160 2514004623 642
141 iso_pu_bacteria 2515154107 2515609767 642
142 iso_pu_bacteria 2516653046 2516896858 642
143 iso_pu_bacteria 2517487022 2517565284 642
144 iso_pu_bacteria 2524023207 2524451358 642
145 iso_pu_bacteria 2551306084 2551675466 642
146 iso_pu_bacteria 2551306085 2551688460 642
147 iso_pu_bacteria 2551306086 2551691969 642
148 iso_pu_bacteria 2551306087 2551701794 642
149 iso_pu_bacteria 2551306089 2551712829 642
150 iso_pu_bacteria 2551306090 2551720309 642
151 iso_pu_bacteria 2551306091 2551727237 642
152 iso_pu_bacteria 2551306092 2551732852 642
153 iso_pu_bacteria 2551306093 2551744882 642
154 iso_pu_bacteria 2551306093 2551745061 642
155 iso_pu_bacteria 2802428858 2802716264 642
156 iso_pu_bacteria 2802428859 2802722698 642
157 iso_pu_bacteria 2802428860 2802729159 642
158 iso_pu_bacteria 2802428861 2802735552 642
159 iso_pu_bacteria 2802428862 2802741873 642
160 iso_pu_bacteria 2802428863 2802748323 642
161 iso_pu_bacteria 2855825444 2855828320 642
162 iso_pu_bacteria 2858800743 2858806302 642
163 iso_pu_bacteria 2915980308 2915984520 642
164 iso_pu_bacteria 2915993759 2916000060 642
165 iso_pu_bacteria 2916000859 2916006040 642
166 iso_pu_bacteria 2916007675 2916013052 642
167 iso_pu_bacteria 2916021584 2916024833 642
168 iso_pu_bacteria 2916028427 2916029741 642
169 iso_pu_bacteria 2916035215 2916037183 642
170 iso_pu_bacteria 2916041962 2916045790 642
171 iso_pu_bacteria 2916048683 2916050121 642
172 iso_pu_bacteria 2916055098 2916059115 642
173 iso_pu_bacteria 2916061851 2916062003 642
174 iso_pu_bacteria 2916076590 2916079787 642
175 iso_pu_bacteria 2921201388 2921202725 642
176 iso_pu_bacteria 2921237296 2921237806 642
177 iso_pu_bacteria 2921244191 2921244473 642
178 iso_pu_bacteria 2921250672 2921253426 642
179 iso_pu_bacteria 2921257292 2921259819 642
180 iso_pu_bacteria 2921263974 2921267134 642
181 iso_pu_bacteria 2921282425 2921282587 642
182 iso_pu_bacteria 2921289301 2921291352 642
183 iso_pu_bacteria 2924150972 2924155306 642
184 iso_pu_bacteria 2924158325 2924158558 642
185 iso_pu_bacteria 2924193448 2924198441 642
186 iso_pu_bacteria 2924207177 2924210122 642
187 iso_pu_bacteria 2924221636 2924226034 642
188 iso_pu_bacteria 2924228884 2924230707 642
189 iso_pu_bacteria 2936996657 2936996768 642
190 iso_pu_bacteria 2937002841 2937004780 642
191 iso_pu_bacteria 2937009748 2937013512 642
192 iso_pu_bacteria 2937016420 2937016710 642
193 iso_pu_bacteria 2937023124 2937026569 642
194 iso_pu_bacteria 2937029754 2937030954 642
195 iso_pu_bacteria 2937036028 2937039636 642
196 iso_pu_bacteria 2937042894 2937044418 642
197 iso_pu_bacteria 2937049772 2937052548 642
198 iso_pu_bacteria 2937056579 2937061453 642
199 iso_pu_bacteria 2937063883 2937068591 642
200 iso_pu_bacteria 2937071275 2937074239 642
201 iso_pu_bacteria 2937078374 2937081252 642
202 iso_pu_bacteria 2937084907 2937089522 642
203 iso_pu_bacteria 2937091812 2937098532 642
204 iso_pu_bacteria 2937098957 2937099078 642
205 iso_pu_bacteria 2937106411 2937108906 642
206 iso_pu_bacteria 2937113482 2937119243 642
207 iso_pu_bacteria 2937119839 2937122487 642
208 iso_pu_bacteria 2937126314 2937127292 642
209 iso_pu_bacteria 2957375807 2957376993 642
210 iso_pu_bacteria 2957382221 2957388298 642
211 iso_pu_bacteria 2957388812 2957392226 642
212 iso_pu_bacteria 2957395598 2957395797 642
213 iso_pu_bacteria 2957402308 2957402595 642
214 iso_pu_bacteria 2957408893 2957411075 642
215 iso_pu_bacteria 2957415311 2957422220 642
216 iso_pu_bacteria 2957430029 2957434176 642
217 iso_pu_bacteria 2957437181 2957440393 642
218 iso_pu_bacteria 2957443900 2957444159 642
219 iso_pu_bacteria 2957450854 2957456219 642
220 iso_pu_bacteria 2957457609 2957461841 642
221 iso_pu_bacteria 2957464669 2957466985 642
222 iso_pu_bacteria 2957471148 2957471317 642
223 iso_pu_bacteria 2957478035 2957482771 642
224 iso_pu_bacteria 2957484790 2957486535 642
225 iso_pu_bacteria 2957491536 2957493272 642
226 iso_pu_bacteria 2957498199 2957502786 642
227 iso_pu_bacteria 2957505466 2957510025 642
228 iso_pu_bacteria 2960584000 2960588419 642
229 iso_pu_bacteria 2960591022 2960595373 642
230 iso_pu_bacteria 2960597568 2960599580 642
231 iso_pu_bacteria 2960603979 2960606982 642
232 iso_pu_bacteria 2960610863 2960614470 642
233 iso_pu_bacteria 2960617483 2960619324 642
234 iso_pu_bacteria 2960624210 2960628237 642
235 iso_pu_bacteria 2960631154 2960631454 642
236 iso_pu_bacteria 2960637947 2960638240 642
237 iso_pu_bacteria 2960645483 2960648625 642
238 iso_pu_bacteria 2960652885 2960652918 642
239 iso_pu_bacteria 2960660292 2960662520 642
240 iso_pu_bacteria 2960667422 2960669250 642
241 iso_pu_bacteria 2960674078 2960678731 642
242 iso_pu_bacteria 2960680706 2960682724 642
243 iso_pu_bacteria 2960687367 2960688990 642
244 iso_pu_bacteria 2960693952 2960699376 642
245 iso_pu_bacteria 2964607997 2964612834 642
246 iso_pu_bacteria 2964615318 2964617297 642
247 iso_pu_bacteria 2964621998 2964622168 642
248 iso_pu_bacteria 2964628898 2964630282 642
249 iso_pu_bacteria 2964636051 2964640372 642
250 iso_pu_bacteria 2964643177 2964648674 642
251 iso_pu_bacteria 2964649959 2964651994 642
252 iso_pu_bacteria 2964656573 2964662932 642
253 iso_pu_bacteria 2964663802 2964668720 642
254 iso_pu_bacteria 2964670856 2964676331 642
255 iso_pu_bacteria 2964678106 2964680096 642
256 iso_pu_bacteria 2964685014 2964687495 642
257 iso_pu_bacteria 2964691889 2964693443 642
258 iso_pu_bacteria 2964698721 2964703820 642
259 iso_pu_bacteria 2964705432 2964707321 642
260 iso_pu_bacteria 2964712639 2964714905 642
261 iso_pu_bacteria 2964719344 2964719750 642
262 iso_pu_bacteria 2967664464 2967666524 642
263 iso_pu_bacteria 2967671571 2967674162 642
264 iso_pu_bacteria 2967678726 2967682351 642
265 iso_pu_bacteria 2967686174 2967692295 642
266 iso_pu_bacteria 2967693043 2967694713 642
267 iso_pu_bacteria 2967699805 2967703317 642
268 iso_pu_bacteria 2967706974 2967707156 642
269 iso_pu_bacteria 2967714385 2967718124 642
270 iso_pu_bacteria 2967721400 2967723925 642
271 iso_pu_bacteria 2967728569 2967731701 642
272 iso_pu_bacteria 2967735183 2967739599 642
273 iso_pu_bacteria 2967742019 2967747210 642
274 iso_pu_bacteria 2967748971 2967753091 642
275 iso_pu_bacteria 2967762386 2967768411 642
276 iso_pu_bacteria 2967769361 2967773408 642
277 iso_pu_bacteria 2967775926 2967781399 642
278 iso_pu_bacteria 2970019648 2970023217 642
279 iso_pu_bacteria 2970026789 2970026804 642
280 iso_pu_bacteria 2970033650 2970034823 642
281 iso_pu_bacteria 2970040964 2970043905 642
282 iso_pu_bacteria 2970047711 2970048041 642
283 iso_pu_bacteria 2970054988 2970055188 642
284 iso_pu_bacteria 2970061556 2970064100 642
285 iso_pu_bacteria 2970068827 2970070110 642
286 iso_pu_bacteria 2970076120 2970076141 642
287 iso_pu_bacteria 2970082768 2970083014 642
288 iso_pu_bacteria 2970088815 2970090985 642
289 iso_pu_bacteria 2970095765 2970099583 642
290 iso_pu_bacteria 2970102677 2970104922 642
291 iso_pu_bacteria 2970109326 2970109559 642
292 iso_pu_bacteria 2970116247 2970118739 642
293 iso_pu_bacteria 2970122695 2970124737 642
294 iso_pu_bacteria 2970129317 2970132606 642
295 iso_pu_bacteria 2970136068 2970140276 642
296 iso_pu_bacteria 2970143518 2970144662 642
297 iso_pu_bacteria 2970149975 2970150052 642
298 iso_pu_bacteria 2970156795 2970158434 642
299 iso_pu_bacteria 2970164137 2970166180 642
300 iso_pu_bacteria 2970170962 2970176611 642
301 iso_pu_bacteria 2970177841 2970184005 642
302 iso_pu_bacteria 2970184632 2970184841 642
303 iso_pu_bacteria 2970191845 2970195181 642
304 iso_pu_bacteria 2977516862 2977522053 642
305 iso_pu_bacteria 2977523885 2977526922 642
306 iso_pu_bacteria 2977530762 2977533075 642
307 iso_pu_bacteria 2977537788 2977538256 642
308 iso_pu_bacteria 2977544691 2977544984 642
309 iso_pu_bacteria 2977551784 2977554045 642
310 iso_pu_bacteria 2977558990 2977564871 642
311 iso_pu_bacteria 2977565890 2977568024 642
312 iso_pu_bacteria 2977572785 2977572870 642
313 iso_pu_bacteria 2977579622 2977581814 642
314 iso_pu_bacteria 648276728 648739750 642
315 iso_pu_bacteria 8003992118 8003996009 642
316 iso_pu_bacteria 8003999396 8004003765 642
317 iso_pu_bacteria 8057132660 8057132964 642
318 3300003762 Ga0055542_1000810 Ga0055542_10008106 643
319 3300003771 Ga0055526_1000835 Ga0055526_100083517 643
320 3300005548 Ga0070665_100005923 Ga0070665_10000592313 643
321 3300006038 Ga0075365_10009899 Ga0075365_100098994 643
322 3300006042 Ga0075368_10000638 Ga0075368_100006384 643
323 3300006048 Ga0075363_100000089 Ga0075363_10000008915 643
324 3300006177 Ga0075362_10000498 Ga0075362_100004982 643
325 3300006178 Ga0075367_10023294 Ga0075367_100232942 643
326 3300010375 Ga0105239_10000065 Ga0105239_10000065101 643
327 3300010375 Ga0105239_10016963 Ga0105239_100169632 643
328 3300013102 Ga0157371_10000002 Ga0157371_10000002196 643
329 3300013249 Ga0171463_1013 Ga0171463_10137 643
330 3300015690 Ga0183363_1243 Ga0183363_12435 643
331 3300025254 Ga0209148_1000126 Ga0209148_1000126131 643
332 3300025272 Ga0209455_1000280 Ga0209455_100028027 643
333 3300025294 Ga0209025_1000581 Ga0209025_100058131 643
334 3300025295 Ga0209564_1000147 Ga0209564_100014784 643
335 3300025299 Ga0209256_1001077 Ga0209256_10010777 643
336 3300027866 Ga0209813_10001012 Ga0209813_100010122 643
337 3300028379 Ga0268266_10006707 Ga0268266_100067076 643
338 3300031456 Ga0307513_10000302 Ga0307513_1000030240 643
339 3300037471 Ga0395905_0000374 Ga0395905_0000374_57137_59140 643
340 3300045051 Ga0451576_0010755 Ga0451576_0010755_3041_5044 643
341 3300048919 Ga0496116_0000026 Ga0496116_0000026_118073_120076 643
342 3300048920 Ga0496117_0000016 Ga0496117_0000016_49135_51138 643
343 3300048920 Ga0496117_0064972 Ga0496117_0064972_58_2061 643
344 3300048921 Ga0496118_0004538 Ga0496118_0004538_716_2719 643
345 3300048922 Ga0496119_0000504 Ga0496119_0000504_14477_16480 643
346 3300048922 Ga0496119_0012552 Ga0496119_0012552_2697_4700 643
347 3300048923 Ga0496120_0000164 Ga0496120_0000164_14320_16323 643
348 3300048923 Ga0496120_0001818 Ga0496120_0001818_2248_4251 643
349 3300048924 Ga0496121_0002955 Ga0496121_0002955_9388_11391 643
350 3300048925 Ga0496122_0000002 Ga0496122_0000002_49798_51801 643
351 3300048925 Ga0496122_0000426 Ga0496122_0000426_43186_45189 643
352 3300048925 Ga0496122_0014678 Ga0496122_0014678_3371_5374 643
353 3300048925 Ga0496122_0025422 Ga0496122_0025422_41_2044 643
354 3300048925 Ga0496122_0043994 Ga0496122_0043994_1310_3313 643
355 3300048926 Ga0496123_0000002 Ga0496123_0000002_1759882_1761885 643
356 3300048926 Ga0496123_0000002 Ga0496123_0000002_49798_51801 643
357 3300048926 Ga0496123_0000380 Ga0496123_0000380_50511_52514 643
358 3300048928 Ga0496125_0003236 Ga0496125_0003236_10555_12558 643
359 3300048928 Ga0496125_0041972 Ga0496125_0041972_1759_3762 643
360 3300048928 Ga0496125_0073091 Ga0496125_0073091_639_2642 643
361 3300048929 Ga0496126_0000069 Ga0496126_0000069_156570_158573 643
362 3300050490 nmdc:mga03n38_785_c1 nmdc:mga03n38_785_c1_3524_5527 643
363 3300050491 nmdc:mga00v17_13_c1 nmdc:mga00v17_13_c1_51766_53769 643
364 3300050492 nmdc:mga0yw44_16860_c1 nmdc:mga0yw44_16860_c1_560_2563 643
365 3300050516 nmdc:mga0sz30_356_c1 nmdc:mga0sz30_356_c1_11737_13740 643
366 3300053125 Ga0500618_000664 Ga0500618_000664_11249_13261 643
367 3300053137 Ga0500561_0000190 Ga0500561_0000190_123_2126 643
368 3300053140 Ga0500573_0023696 Ga0500573_0023696_1293_3296 643
369 3300053177 Ga0500636_0000038 Ga0500636_0000038_56317_58320 643
370 iso_pu_bacteria 2516143018 2516207807 643
371 iso_pu_bacteria 2657244999 2657683582 643
372 iso_pu_bacteria 2751185800 2753359528 643
373 iso_pu_bacteria 2791355082 2792584647 643
374 iso_pu_bacteria 2791355094 2792640170 643
375 iso_pu_bacteria 643692032 643823942 643
376 iso_pu_bacteria 8049293176 8049296857 643
377 3300002737 JGI25162J39368_1000109 JGI25162J39368_100010920 644
378 3300003214 JGI25165J46597_1000597 JGI25165J46597_100059722 644
379 3300003792 Ga0055540_1000263 Ga0055540_100026311 644
380 3300025233 Ga0209437_100064 Ga0209437_100064250 644
381 3300025261 Ga0209233_1000081 Ga0209233_100008151 644
382 3300025298 Ga0209050_1003647 Ga0209050_10036472 644
383 3300025303 Ga0209051_1000032 Ga0209051_100003211 644

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

137

346

0.99

PF00289

Biotin_carb_N

Biotin carboxylase, N-terminal domain

23

132

0.98

PF02785

Biotin_carb_C

Biotin carboxylase C-terminal domain

358

486

0.97

PF18140

PCC_BT

Propionyl-coenzyme A carboxylase BT domain

505

628

0.97

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

636

702

0.96

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

638

677

0.9

PF02222

ATP-grasp

ATP-grasp domain

146

316

0.84

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

147

315

0.81

PF08443

RimK

RimK-like ATP-grasp domain

135

338

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3jzf-assembly1.cif.gz_A crystal structure of biotin carboxylase from e. coli in complex with benzimidazoles series 0.962 1 451
5mlk-assembly1.cif.gz_B biotin dependent carboxylase acca3 dimer from mycobacterium tuberculosis (rv3285) 0.9593 2 452
2vr1-assembly1.cif.gz_A crystal structure of biotin carboxylase from e. coli in complex with atp analog, adpcf2p. 0.9589 1 453
1dv2-assembly2.cif.gz_B the structure of biotin carboxylase, mutant e288k, complexed with atp 0.9586 1 453
2j9g-assembly1.cif.gz_A crystal structure of biotin carboxylase from e. coli in complex with amppnp and adp 0.9583 1 453
ID Description Score Start End Superfamily
af_P05165_193_263_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.999 132 202 3.30.1490.20
af_P05165_193_263_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9852 132 202 3.30.1490.20
af_A0A1D8PDC6_745_814_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9753 132 202 3.30.1490.20
af_P9WPQ3_1_451_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9666 1 451 3.30.470.20
af_P32528_626_1076_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9663 2 446 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A2N7S8A1-F1-model_v4 deleted 0.9822 86 276
AF-A0A2N7S8A1-F1-model_v4 deleted 0.9771 86 276
AF-A0A061NU67-F1-model_v4 Biotin carboxylase of methylcrotonyl-CoA carboxylase 0.9752 100 452 GO:0005524
GO:0016874
GO:0046872
AF-A0A3D3U0N6-F1-model_v4 deleted 0.975 1 343
AF-A0A2M9QBF8-F1-model_v4 Biotin carboxylase 0.9736 62 345 GO:0005524
GO:0016874
GO:0046872

Feature Viewer

pLDDT pTM Quality
88.43 0.85 High
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Predicted Structure (AlphaFold2)

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