F428473

General Info

Members Datasets Scaffolds Average Seq Length
379 297 758 654

Family's Representative Sequence

Representative Sequence 3300048928|Ga0496125_0011127|Ga0496125_0011127_3117_5183
Length 688
Sequence MQHISGHLKEEKSFMTNQKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMSRYKRLRGYEVRYLTGTDEHGQKIERKAQEKGLSPQAFIDEIVVGIKDLWNKLDISNDDFIRTTEERHKTVVQDIFDRLLKQGDIYKGEYEGWYSIPDETYYTETQLVDVEKNEKGEIISAKSPDSGHPVELVKEESYFFRMSKYADRLLQYYEENPGFIQPESRKNEMINNFIKPGLEDLAVSRTTFEWGVKVKGDPKHVVYVWIDALSNYITALGYGSSDASLYDKFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGTFTPESFVERVNSDLANDLGNLLNRTVAMVDKYFEGKAPAFASNVTAFDASLEEAGHATVEKVEQAMENLQFSVALTAISQFVSRSNKYIDETQPWALARDEAKRDELASVMSHLIESLRIASILLQPFLTRAPRKIWEQLGIQESELTSWDSAKQWGIIPAGNALHKGDPIFPRLDAEQEIAYISEAMTGGQKAAQADGSQAEAATEAPAEPVAAPEGKEEIGIDDFAKVELRVAQVIACEPVKKADKLLKLQLDLGYEKRQVVSGIAKFYSPEEMVGRKVICVTNLKPVKLRGELSQGMILAASHGDQLTLATVPDGMPNGAQVK

Samples

Sample ID Description Type Environment
1 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
7 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
17 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
18 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
19 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
31 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
32 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
36 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
49 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
53 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
61 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
62 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
71 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
72 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
73 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
74 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
75 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
76 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
77 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
78 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
79 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
80 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
83 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
87 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
93 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
94 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
95 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
96 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
97 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
98 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
99 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
100 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
101 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
102 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
105 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
106 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
107 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
108 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
109 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
110 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
111 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
112 2554235283 Bacillus safensis VK Isolate Rhizosphere
113 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
114 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
115 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
116 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
117 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
118 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
119 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
120 2599185353 Staphylococcus sp. NFPP34 Isolate Rhizoplane
121 2600254943 Staphylococcus pasteuri NFIX07 Isolate Rhizoplane
122 2600255229 Lactobacillus acidophilus A 16 Isolate Rhizosphere
123 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
124 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
125 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
126 2643221729 Bacillus sp. Root11 Isolate Unclassified
127 2643221730 Bacillus sp. Root131 Isolate Unclassified
128 2643221731 Bacillus sp. Root147 Isolate Unclassified
129 2643221732 Bacillus sp. Root239 Isolate Unclassified
130 2643221735 Bacillus sp. Root920 Isolate Unclassified
131 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
132 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
133 2671180694 Paenibacillus sp. A3 Isolate Unclassified
134 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
135 2684622632 Bacillus cereus 905 Isolate Unclassified
136 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
137 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
138 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
139 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
140 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
141 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
142 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
143 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
144 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
145 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
146 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
147 2738541295 Bacillus sp. OK085 Isolate Unclassified
148 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
149 2738541358 Bacillus sp. OV752 Isolate Unclassified
150 2738543006 Bacillus sp. OK077 Isolate Unclassified
151 2738543010 Bacillus sp. YR335 Isolate Unclassified
152 2738543017 Bacillus sp. OV186 Isolate Unclassified
153 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
154 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
155 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
156 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
157 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
158 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
159 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
160 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
161 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
162 2811994870 Bacillus sp. JB4 Isolate Unclassified
163 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
164 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
165 2818991441 Niallia circulans 3243 Isolate Rhizosphere
166 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
167 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
168 2818991459 Paenibacillus sp. 597 Isolate Unclassified
169 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
170 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
171 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
172 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
173 2842682962 Bacillus sp. R-72492 Isolate Unclassified
174 2842882022 Bacillus sp. R-71893 Isolate Unclassified
175 2849139964 Bacillus sp. R-71875 Isolate Unclassified
176 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
177 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
178 2857472729 Cohnella sp. R-74144 Isolate Unclassified
179 2857581216 Bacillus sp. R-71922 Isolate Unclassified
180 2857586860 Bacillus sp. R-71935 Isolate Unclassified
181 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
182 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
183 2858438669 Leuconostoc mesenteroides YL48 Isolate Unclassified
184 2860837431 Bacillus sp. WR11 Isolate Unclassified
185 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
186 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
187 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
188 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
189 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
190 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
191 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
192 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
193 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
194 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
195 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
196 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
197 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
198 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
199 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
200 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
201 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
202 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
203 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
204 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
205 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
206 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
207 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
208 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
209 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
210 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
211 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
212 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
213 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
214 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
215 2919720352 Priestia megaterium 4340 Isolate Unclassified
216 2919726948 Bacillus pumilus 4489 Isolate Unclassified
217 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
218 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
219 2928519762 Leuconostoc citreum 1377 Isolate Rhizosphere
220 2929004312 Priestia megaterium 1104 Isolate Unclassified
221 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
222 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
223 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
224 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
225 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
226 2938917290 Bacillus sp. CR71 Isolate Unclassified
227 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
228 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
229 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
230 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
231 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
232 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
233 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
234 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
235 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
236 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
237 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
238 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
239 2965761152 Bacillus sp. COPE52 Isolate Unclassified
240 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
241 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
242 2969141011 Bacillus velezensis MH25 Isolate Unclassified
243 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
244 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
245 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
246 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
247 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
248 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
249 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
250 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
251 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
252 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
253 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
254 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
255 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
256 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
257 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
258 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
259 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
260 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
261 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
262 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
263 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
264 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
265 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
266 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
267 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
268 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
269 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
270 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
271 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
272 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
273 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
274 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
275 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
276 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
277 8022653035 Bacillus sp. Rc4 Isolate Unclassified
278 8022792930 Bacillus sp. Xin Isolate Rhizosphere
279 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
280 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
281 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
282 8023438354 Bacillus sp. BH2 Isolate Unclassified
283 8023444577 Bacillus sp. BH32 Isolate Unclassified
284 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
285 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
286 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
287 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
288 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
289 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
290 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
291 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
292 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
293 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
294 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
295 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere
296 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
297 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 47.76
Metatranscriptomes 1.58
Isolates 50.66

Biome Distribution

Category Percentage (%)
Aerial Root 0.53
Bulb 0
Endosphere 10.55
Nodule 1.32
Rhizoplane 3.43
Rhizosphere 47.49
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496125_0011127 3300048928 Bacteria 9023
2 JGI25159J45721_1008555 3300002987 Bacteria 2799
3 JGI25151J46595_10000294 3300003187 Bacteria 55267
4 JGI25151J46595_10002207 3300003187 Bacteria 12025
5 JGI25151J46595_10003067 3300003187 Bacteria 9436
6 JGI25151J46595_10007628 3300003187 Bacteria 5282
7 JGI25151J46595_10008057 3300003187 Bacteria 5106
8 rootL2_10026919 3300003322 Bacteria 23390
9 Ga0006562J51391_1000026 3300003578 Bacteria 55240
10 Ga0006562J51391_1000027 3300003578 Bacteria 10580
11 Ga0006562J51391_1011743 3300003578 Bacteria 2135
12 Ga0006562J51391_1012324 3300003578 Bacteria 2565
13 Ga0055538_1000222 3300003751 Bacteria 32336
14 Ga0055538_1000253 3300003751 Bacteria 28492
15 Ga0055532_1000183 3300003758 Bacteria 53163
16 Ga0055528_1002260 3300003790 Bacteria 10469
17 Ga0070683_100000122 3300005329 Bacteria 50833
18 Ga0068868_100064529 3300005338 Bacteria 2907
19 Ga0070675_100033167 3300005354 Bacteria 4184
20 Ga0070681_10002684 3300005458 Bacteria 16354
21 Ga0070681_10066354 3300005458 Bacteria 3577
22 Ga0070684_100000125 3300005535 Bacteria 50833
23 Ga0068863_100095950 3300005841 Bacteria 2815
24 Ga0075430_100082258 3300006846 Bacteria 2698
25 Ga0079104_1000151 3300006946 Bacteria 97480
26 Ga0079104_1003394 3300006946 Bacteria 7445
27 Ga0105251_10019502 3300009011 Bacteria 3580
28 Ga0105244_10005856 3300009036 Bacteria 8074
29 Ga0105244_10006706 3300009036 Bacteria 7411
30 Ga0105244_10028322 3300009036 Bacteria 3006
31 Ga0105250_10001950 3300009092 Bacteria 10685
32 Ga0105250_10006174 3300009092 Bacteria 5264
33 Ga0105250_10012540 3300009092 Bacteria 3497
34 Ga0105240_10001227 3300009093 Bacteria 44588
35 Ga0105240_10042353 3300009093 Bacteria 5803
36 Ga0105245_10007570 3300009098 Bacteria 9513
37 Ga0105247_10003349 3300009101 Bacteria 10487
38 Ga0105243_10010571 3300009148 Bacteria 7008
39 Ga0105242_10003548 3300009176 Bacteria 12126
40 Ga0105248_10118221 3300009177 Bacteria 2990
41 Ga0105237_10014440 3300009545 Bacteria 8259
42 Ga0105237_10095231 3300009545 Bacteria 2966
43 Ga0105239_10027483 3300010375 Bacteria 6263
44 Ga0105246_10027503 3300011119 Bacteria 3727
45 Ga0157369_10013061 3300013105 Bacteria 9404
46 Ga0157377_10000539 3300014745 Bacteria 15995
47 Ga0157376_10001625 3300014969 Bacteria 14877
48 Ga0209784_100046 3300025224 Bacteria 200009
49 Ga0209784_100231 3300025224 Bacteria 37209
50 Ga0209566_100015 3300025225 Bacteria 457963
51 Ga0209566_100193 3300025225 Bacteria 63336
52 Ga0209566_100346 3300025225 Bacteria 39976
53 Ga0209147_100240 3300025229 Bacteria 53218
54 Ga0209147_100717 3300025229 Bacteria 16793
55 Ga0209147_102553 3300025229 Bacteria 4384
56 Ga0209437_100903 3300025233 Bacteria 11800
57 Ga0209130_1002460 3300025284 Bacteria 9254
58 Ga0209130_1004801 3300025284 Bacteria 4964
59 Ga0209675_1003517 3300025291 Bacteria 7397
60 Ga0209676_1000811 3300025292 Bacteria 40853
61 Ga0209676_1001854 3300025292 Bacteria 17424
62 Ga0209676_1018387 3300025292 Bacteria 2439
63 Ga0209025_1000734 3300025294 Bacteria 55490
64 Ga0209025_1000834 3300025294 Bacteria 48958
65 Ga0209025_1002290 3300025294 Bacteria 20792
66 Ga0209025_1002991 3300025294 Bacteria 16752
67 Ga0209025_1003089 3300025294 Bacteria 16333
68 Ga0209025_1003302 3300025294 Bacteria 15517
69 Ga0209025_1003686 3300025294 Bacteria 14128
70 Ga0209025_1009024 3300025294 Bacteria 7036
71 Ga0209025_1009338 3300025294 Bacteria 6859
72 Ga0209025_1012504 3300025294 Bacteria 5431
73 Ga0209025_1012540 3300025294 Bacteria 5422
74 Ga0209025_1016420 3300025294 Bacteria 4370
75 Ga0209025_1029982 3300025294 Bacteria 2616
76 Ga0207696_1005061 3300025711 Bacteria 5537
77 Ga0207696_1008042 3300025711 Bacteria 4074
78 Ga0207696_1011790 3300025711 Bacteria 3128
79 Ga0207655_1004371 3300025728 Bacteria 10048
80 Ga0207655_1014907 3300025728 Bacteria 4355
81 Ga0207713_1000839 3300025735 Bacteria 28258
82 Ga0207713_1000866 3300025735 Bacteria 27707
83 Ga0207713_1019103 3300025735 Bacteria 3367
84 Ga0207707_10011204 3300025912 Bacteria 7801
85 Ga0207695_10008451 3300025913 Bacteria 12893
86 Ga0207695_10029299 3300025913 Bacteria 6087
87 Ga0207686_10013231 3300025934 Bacteria 4562
88 Ga0207661_10000116 3300025944 Bacteria 50866
89 Ga0207641_10033188 3300026088 Bacteria 4290
90 Ga0209281_1000169 3300027111 Bacteria 154679
91 Ga0209281_1000382 3300027111 Bacteria 70064
92 Ga0237817_10033 3300030083 Bacteria 48418
93 Ga0265316_10025973 3300031344 Bacteria 4880
94 Ga0265314_10004316 3300031711 Bacteria 13266
95 Ga0316576_10013480 3300031727 Bacteria 5436
96 Ga0316576_10098443 3300031727 Bacteria 2184
97 Ga0307405_10071014 3300031731 Bacteria 2239
98 Ga0307409_100002945 3300031995 Bacteria 9056
99 Ga0307416_100011885 3300032002 Bacteria 5838
100 Ga0373925_0000742 3300037068 Bacteria 29951
101 Ga0436364_1200558 3300037853 Bacteria 3005
102 Ga0237819_00290 3300038705 Bacteria 18488
103 Ga0237819_01187 3300038705 Bacteria 7332
104 Ga0436365_0543679 3300039437 Bacteria 12016
105 Ga0439439_0000228 3300041406 Bacteria 8744
106 Ga0439449_0004514 3300042007 Bacteria 5376
107 Ga0439462_0003482 3300042015 Bacteria 3778
108 Ga0439462_0008377 3300042015 Bacteria 2605
109 Ga0451577_0006418 3300042876 Bacteria 11736
110 Ga0453683_0012542 3300044673 Bacteria 5551
111 Ga0453684_0002884 3300044712 Bacteria 40335
112 Ga0466959_0002290 3300045049 Bacteria 12212
113 Ga0451576_0024561 3300045051 Bacteria 6509
114 Ga0451576_0083786 3300045051 Bacteria 3317
115 Ga0466967_0003687 3300045976 Bacteria 10083
116 Ga0495629_0000010 3300046459 Bacteria 340114
117 Ga0495639_0000443 3300046475 Bacteria 19716
118 Ga0495630_0061461 3300046517 Bacteria 2821
119 Ga0495666_0000818 3300046526 Bacteria 14396
120 Ga0495654_0020844 3300046530 Bacteria 3413
121 Ga0495586_0000580 3300046535 Bacteria 21199
122 Ga0495586_0048660 3300046535 Bacteria 2292
123 Ga0495633_0019171 3300046558 Bacteria 3461
124 Ga0495635_0010572 3300046663 Bacteria 6460
125 Ga0495658_0003567 3300046683 Bacteria 7702
126 Ga0495600_0038614 3300046809 Bacteria 3107
127 Ga0495660_0013252 3300046810 Bacteria 4776
128 Ga0495660_0031505 3300046810 Bacteria 2981
129 Ga0495672_0017066 3300047320 Bacteria 4863
130 Ga0495680_0003587 3300047322 Bacteria 15200
131 Ga0495684_0032285 3300047471 Bacteria 4019
132 Ga0496100_0001157 3300048903 Bacteria 12834
133 Ga0496102_0027981 3300048905 Bacteria 5037
134 Ga0496104_0004309 3300048907 Bacteria 12374
135 Ga0496105_0001202 3300048908 Bacteria 18028
136 Ga0496106_0002287 3300048909 Bacteria 14290
137 Ga0496108_0001340 3300048911 Bacteria 19362
138 Ga0496109_0000447 3300048912 Bacteria 35408
139 Ga0496110_0001736 3300048913 Bacteria 16067
140 Ga0496110_0003703 3300048913 Bacteria 11770
141 Ga0496112_0001079 3300048915 Bacteria 20179
142 Ga0496116_0006481 3300048919 Bacteria 10607
143 Ga0496116_0012308 3300048919 Bacteria 6994
144 Ga0496116_0024080 3300048919 Bacteria 4511
145 Ga0496117_0000409 3300048920 Bacteria 72196
146 Ga0496117_0019196 3300048920 Bacteria 5625
147 Ga0496118_0049124 3300048921 Bacteria 3251
148 Ga0496119_0000054 3300048922 Bacteria 181312
149 Ga0496119_0000122 3300048922 Bacteria 109048
150 Ga0496119_0002010 3300048922 Bacteria 23011
151 Ga0496119_0061762 3300048922 Bacteria 2235
152 Ga0496120_0000037 3300048923 Bacteria 204517
153 Ga0496120_0000675 3300048923 Bacteria 50068
154 Ga0496120_0000736 3300048923 Bacteria 47930
155 Ga0496120_0007609 3300048923 Bacteria 8029
156 Ga0496120_0018479 3300048923 Bacteria 4490
157 Ga0496120_0024140 3300048923 Bacteria 3795
158 Ga0496121_0079143 3300048924 Bacteria 2610
159 Ga0496121_0087455 3300048924 Bacteria 2446
160 Ga0496122_0000139 3300048925 Bacteria 169425
161 Ga0496122_0003051 3300048925 Bacteria 22645
162 Ga0496122_0003834 3300048925 Bacteria 19330
163 Ga0496122_0004677 3300048925 Bacteria 16806
164 Ga0496122_0009434 3300048925 Bacteria 10283
165 Ga0496122_0015178 3300048925 Bacteria 7382
166 Ga0496122_0036614 3300048925 Bacteria 3964
167 Ga0496122_0047160 3300048925 Bacteria 3329
168 Ga0496123_0002138 3300048926 Bacteria 25254
169 Ga0496123_0002501 3300048926 Bacteria 22645
170 Ga0496123_0006953 3300048926 Bacteria 10808
171 Ga0496124_0001617 3300048927 Bacteria 32284
172 Ga0496124_0002181 3300048927 Bacteria 26152
173 Ga0496124_0040329 3300048927 Bacteria 4040
174 Ga0496125_0000084 3300048928 Bacteria 223170
175 Ga0496125_0000780 3300048928 Bacteria 52165
176 Ga0496125_0004718 3300048928 Bacteria 15540
177 Ga0496125_0005940 3300048928 Bacteria 13373
178 Ga0496126_0000266 3300048929 Bacteria 111148
179 Ga0496126_0000395 3300048929 Bacteria 89618
180 Ga0496126_0000516 3300048929 Bacteria 75076
181 Ga0496126_0002188 3300048929 Bacteria 27167
182 Ga0496126_0011783 3300048929 Bacteria 9001
183 Ga0501311_001829 3300049527 Bacteria 1939
184 Ga0501316_001238 3300049532 Bacteria 2113
185 Ga0500566_0000713 3300053094 Bacteria 18708
186 Ga0500637_0008180 3300053178 Bacteria 5265
187 Ga0501082_0000138 3300060353 Bacteria 59990
188 2511697905 2511231119 Bacteria 4019861
189 2512732383 2512564039 Bacteria 8739048
190 2524190779 2524023129 Bacteria 6762600
191 2540605129 2540341094 Bacteria 4061186
192 2545559842 2545555800 Bacteria 4222588
193 2555470940 2554235283 Bacteria 3683090
194 2556066059 2554235469 Bacteria 3590176
195 2563927158 2563366752 Bacteria 4961801
196 2578337883 2576861424 Bacteria 5270569
197 2578930799 2576861599 Bacteria 4217202
198 2587738555 2585428059 Bacteria 8696589
199 2595092105 2593339131 Bacteria 5116855
200 2595318569 2593339198 Bacteria 7267884
201 2600199983 2599185353 Bacteria 2219443
202 2600402987 2600254943 Bacteria 2613887
203 2601446790 2600255229 Bacteria 1988965
204 2631985980 2630968484 Bacteria 3876276
205 2643738230 2643221543 Bacteria 6628015
206 2644426932 2643221676 Bacteria 8119172
207 2644705881 2643221729 Bacteria 6621700
208 2644713331 2643221730 Bacteria 6523787
209 2644718583 2643221731 Bacteria 5623886
210 2644723496 2643221732 Bacteria 5756404
211 2644741741 2643221735 Bacteria 3676263
212 2651529638 2648501850 Bacteria 3975476
213 2672333491 2671180330 Bacteria 5521719
214 2673822908 2671180694 Bacteria 7506943
215 2674421175 2671180844 Bacteria 4164150
216 2685153481 2684622632 Bacteria 5380049
217 2686995227 2684623153 Bacteria 3878815
218 2687496476 2687453109 Bacteria 3860091
219 2695629820 2695420354 Bacteria 3922431
220 2698319709 2695420987 Bacteria 6152737
221 2705991930 2703719227 Bacteria 5631989
222 2712198505 2711768088 Bacteria 3195027
223 2717914494 2716884898 Bacteria 3928789
224 2721503355 2718218445 Bacteria 5113413
225 2723604751 2721755693 Bacteria 6126117
226 2728534635 2728368933 Bacteria 7044283
227 2730135389 2728369359 Bacteria 5621728
228 2738817584 2738541295 Bacteria 5730091
229 2738840619 2738541299 Bacteria 4020721
230 2739160239 2738541358 Bacteria 5932299
231 2739212758 2738543006 Bacteria 5904091
232 2739234688 2738543010 Bacteria 5583595
233 2739271836 2738543017 Bacteria 4271950
234 2753809807 2751185905 Bacteria 6142767
235 2757569072 2757320391 Bacteria 4746095
236 2777762410 2775507177 Bacteria 4384303
237 2777838603 2775507192 Bacteria 4622234
238 2791211380 2788500588 Bacteria 4584915
239 2793186030 2791355222 Bacteria 5898266
240 2802437007 2802428803 Bacteria 5806948
241 2808871081 2808606364 Bacteria 4465927
242 2809057151 2808606399 Bacteria 4021018
243 2812314364 2811994870 Bacteria 3776934
244 2816866432 2816332186 Bacteria 5331395
245 2817478092 2816332295 Bacteria 4352468
246 2819571315 2818991441 Bacteria 5062707
247 2819585116 2818991443 Bacteria 6598732
248 2819629499 2818991451 Bacteria 4697364
249 2819669376 2818991459 Bacteria 8736032
250 2819712051 2818991465 Bacteria 5388835
251 2819726121 2818991468 Bacteria 3723169
252 2821114465 2821111986 Bacteria 6894338
253 2823526315 2823526263 Bacteria 3765752
254 2842688393 2842682962 Bacteria 5589973
255 2842888032 2842882022 Bacteria 6158489
256 2849145117 2849139964 Bacteria 5613304
257 2852677287 2852673933 Bacteria 3347676
258 2857453659 2857453340 Bacteria 8090534
259 2857473840 2857472729 Bacteria 6568124
260 2857586534 2857581216 Bacteria 5522813
261 2857591228 2857586860 Bacteria 4354574
262 2857609056 2857604169 Bacteria 5111450
263 2857613520 2857609550 Bacteria 3753890
264 2858439076 2858438669 Bacteria 2058402
265 2860837481 2860837431 Bacteria 4202080
266 2864737752 2864733723 Bacteria 6770668
267 2864997989 2864997549 Bacteria 5139696
268 2865003555 2865002811 Bacteria 6333767
269 2877768700 2877768649 Bacteria 3957164
270 2880169643 2880169592 Bacteria 3900066
271 2881647359 2881644220 Bacteria 5302661
272 2885527420 2885526491 Bacteria 7164189
273 2888581036 2888578766 Bacteria 6743310
274 2889046610 2889042446 Bacteria 7618936
275 2889050287 2889049205 Bacteria 7524325
276 2889280661 2889276214 Bacteria 5979355
277 2889297385 2889295896 Bacteria 4704906
278 2897109667 2897109615 Bacteria 4009619
279 2904118158 2904113452 Bacteria 7796941
280 2904163436 2904162308 Bacteria 7086713
281 2904497034 2904490793 Bacteria 7046938
282 2904530281 2904524088 Bacteria 5887454
283 2904564537 2904560550 Bacteria 4029838
284 2904595408 2904595352 Bacteria 6124848
285 2904611491 2904606771 Bacteria 4684500
286 2904761916 2904755435 Bacteria 7986759
287 2907205597 2907202186 Bacteria 6632024
288 2908669283 2908665501 Bacteria 3678115
289 2916971959 2916971899 Bacteria 4250608
290 2919097042 2919093281 Bacteria 3660974
291 2919149584 2919143609 Bacteria 6219228
292 2919165318 2919160200 Bacteria 6929020
293 2919419144 2919414237 Bacteria 5429133
294 2919429779 2919425241 Bacteria 8055701
295 2919523126 2919517244 Bacteria 5858162
296 2919726304 2919720352 Bacteria 5986006
297 2919730713 2919726948 Bacteria 3696050
298 2928099784 2928093941 Bacteria 5965005
299 2928515329 2928510474 Bacteria 4815308
300 2928521193 2928519762 Bacteria 1953908
301 2929010047 2929004312 Bacteria 5678476
302 2929208560 2929206907 Bacteria 5918291
303 2929233169 2929233124 Bacteria 5948380
304 2931390058 2931384279 Bacteria 7299545
305 2936343241 2936340661 Bacteria 5139038
306 2936363598 2936361878 Bacteria 5632809
307 2938917347 2938917290 Bacteria 5914775
308 2939596769 2939593269 Bacteria 4798695
309 2939679952 2939679117 Bacteria 6921672
310 2939706420 2939702853 Bacteria 5139229
311 2945991246 2945991243 Bacteria 7008369
312 2946053945 2946053406 Bacteria 6978655
313 2947426635 2947426588 Bacteria 5357194
314 2954776178 2954773129 Bacteria 3741715
315 2956901154 2956897341 Bacteria 5447711
316 2960323605 2960319331 Bacteria 5502575
317 2960379238 2960375949 Bacteria 5361395
318 2962290691 2962290636 Bacteria 4072939
319 2964376594 2964375228 Bacteria 4909004
320 2965761216 2965761152 Bacteria 5806513
321 2968560322 2968558590 Bacteria 6956864
322 2969136898 2969136845 Bacteria 3923176
323 2969141064 2969141011 Bacteria 4118468
324 2969766308 2969765954 Bacteria 4216713
325 2969770392 2969770375 Bacteria 4271280
326 2971415978 2971410472 Bacteria 8311090
327 2971512484 2971511577 Bacteria 5404012
328 2971893428 2971893375 Bacteria 3929648
329 2977254793 2977254563 Bacteria 4828420
330 2979089190 2979083700 Bacteria 5894929
331 2980129025 2980125574 Bacteria 5567337
332 2980178135 2980176882 Bacteria 5397533
333 2980188803 2980182181 Bacteria 9454109
334 2980492642 2980492589 Bacteria 4072961
335 2981285866 2981284811 Bacteria 4641497
336 2981290816 2981289755 Bacteria 4641509
337 2981980568 2981980479 Bacteria 4641628
338 2981985441 2981985349 Bacteria 4641497
339 2984530184 2984527788 Bacteria 5288478
340 2984536291 2984532647 Bacteria 5288506
341 2988230610 2988225383 Bacteria 7221625
342 2990275792 2990275345 Bacteria 4887158
343 2996635585 2996632988 Bacteria 6921523
344 3001272029 3001267043 Bacteria 4823521
345 3001275847 3001272096 Bacteria 4729684
346 3001894121 3001892409 Bacteria 6328293
347 3006828807 3006826541 Bacteria 4678913
348 3006858415 3006858327 Bacteria 4317835
349 3006970069 3006969106 Bacteria 4739423
350 3006976371 3006973921 Bacteria 4423788
351 3006978440 3006973921 Bacteria 4423788
352 3006980114 3006978542 Bacteria 5328100
353 3006988408 3006984091 Bacteria 4207523
354 3006993299 3006988479 Bacteria 4767936
355 648170790 648028048 Bacteria 5394884
356 8002323609 8002317523 Bacteria 8051857
357 8007377014 8007375930 Bacteria 4080554
358 8022631724 8022630665 Bacteria 3886130
359 8022655723 8022653035 Bacteria 4035078
360 8022796030 8022792930 Bacteria 5693794
361 8022896337 8022893055 Bacteria 5300455
362 8022917965 8022914991 Bacteria 5584517
363 8022952115 8022948649 Bacteria 5366783
364 8023440730 8023438354 Bacteria 5779374
365 8023447667 8023444577 Bacteria 5661597
366 8046998937 8046991243 Bacteria 8497463
367 8051956570 8051952484 Bacteria 3926774
368 8052175047 8052174270 Bacteria 3881265
369 8054282915 8054280661 Bacteria 4232245
370 8054469786 8054465665 Bacteria 7323556
371 8054804673 8054795415 Bacteria 9785225
372 8055531855 8055531788 Bacteria 5249694
373 8055635776 8055632911 Bacteria 5283357
374 8056536351 8056533031 Bacteria 8964429
375 8057477190 8057473075 Bacteria 5892720
376 8057582701 8057582654 Bacteria 5218944
377 8057632178 8057632132 Bacteria 4726859
378 8057733594 8057733483 Bacteria 6578323
379 8057979030 8057977335 Bacteria 5694872
380 Ga0496125_0011127
381 JGI25159J45721_1008555
382 JGI25151J46595_10000294
383 JGI25151J46595_10002207
384 JGI25151J46595_10003067
385 JGI25151J46595_10007628
386 JGI25151J46595_10008057
387 rootL2_10026919
388 Ga0006562J51391_1000026
389 Ga0006562J51391_1000027
390 Ga0006562J51391_1011743
391 Ga0006562J51391_1012324
392 Ga0055538_1000222
393 Ga0055538_1000253
394 Ga0055532_1000183
395 Ga0055528_1002260
396 Ga0070683_100000122
397 Ga0068868_100064529
398 Ga0070675_100033167
399 Ga0070681_10002684
400 Ga0070681_10066354
401 Ga0070684_100000125
402 Ga0068863_100095950
403 Ga0075430_100082258
404 Ga0079104_1000151
405 Ga0079104_1003394
406 Ga0105251_10019502
407 Ga0105244_10005856
408 Ga0105244_10006706
409 Ga0105244_10028322
410 Ga0105250_10001950
411 Ga0105250_10006174
412 Ga0105250_10012540
413 Ga0105240_10001227
414 Ga0105240_10042353
415 Ga0105245_10007570
416 Ga0105247_10003349
417 Ga0105243_10010571
418 Ga0105242_10003548
419 Ga0105248_10118221
420 Ga0105237_10014440
421 Ga0105237_10095231
422 Ga0105239_10027483
423 Ga0105246_10027503
424 Ga0157369_10013061
425 Ga0157377_10000539
426 Ga0157376_10001625
427 Ga0209784_100046
428 Ga0209784_100231
429 Ga0209566_100015
430 Ga0209566_100193
431 Ga0209566_100346
432 Ga0209147_100240
433 Ga0209147_100717
434 Ga0209147_102553
435 Ga0209437_100903
436 Ga0209130_1002460
437 Ga0209130_1004801
438 Ga0209675_1003517
439 Ga0209676_1000811
440 Ga0209676_1001854
441 Ga0209676_1018387
442 Ga0209025_1000734
443 Ga0209025_1000834
444 Ga0209025_1002290
445 Ga0209025_1002991
446 Ga0209025_1003089
447 Ga0209025_1003302
448 Ga0209025_1003686
449 Ga0209025_1009024
450 Ga0209025_1009338
451 Ga0209025_1012504
452 Ga0209025_1012540
453 Ga0209025_1016420
454 Ga0209025_1029982
455 Ga0207696_1005061
456 Ga0207696_1008042
457 Ga0207696_1011790
458 Ga0207655_1004371
459 Ga0207655_1014907
460 Ga0207713_1000839
461 Ga0207713_1000866
462 Ga0207713_1019103
463 Ga0207707_10011204
464 Ga0207695_10008451
465 Ga0207695_10029299
466 Ga0207686_10013231
467 Ga0207661_10000116
468 Ga0207641_10033188
469 Ga0209281_1000169
470 Ga0209281_1000382
471 Ga0237817_10033
472 Ga0265316_10025973
473 Ga0265314_10004316
474 Ga0316576_10013480
475 Ga0316576_10098443
476 Ga0307405_10071014
477 Ga0307409_100002945
478 Ga0307416_100011885
479 Ga0373925_0000742
480 Ga0436364_1200558
481 Ga0237819_00290
482 Ga0237819_01187
483 Ga0436365_0543679
484 Ga0439439_0000228
485 Ga0439449_0004514
486 Ga0439462_0003482
487 Ga0439462_0008377
488 Ga0451577_0006418
489 Ga0453683_0012542
490 Ga0453684_0002884
491 Ga0466959_0002290
492 Ga0451576_0024561
493 Ga0451576_0083786
494 Ga0466967_0003687
495 Ga0495629_0000010
496 Ga0495639_0000443
497 Ga0495630_0061461
498 Ga0495666_0000818
499 Ga0495654_0020844
500 Ga0495586_0000580
501 Ga0495586_0048660
502 Ga0495633_0019171
503 Ga0495635_0010572
504 Ga0495658_0003567
505 Ga0495600_0038614
506 Ga0495660_0013252
507 Ga0495660_0031505
508 Ga0495672_0017066
509 Ga0495680_0003587
510 Ga0495684_0032285
511 Ga0496100_0001157
512 Ga0496102_0027981
513 Ga0496104_0004309
514 Ga0496105_0001202
515 Ga0496106_0002287
516 Ga0496108_0001340
517 Ga0496109_0000447
518 Ga0496110_0001736
519 Ga0496110_0003703
520 Ga0496112_0001079
521 Ga0496116_0006481
522 Ga0496116_0012308
523 Ga0496116_0024080
524 Ga0496117_0000409
525 Ga0496117_0019196
526 Ga0496118_0049124
527 Ga0496119_0000054
528 Ga0496119_0000122
529 Ga0496119_0002010
530 Ga0496119_0061762
531 Ga0496120_0000037
532 Ga0496120_0000675
533 Ga0496120_0000736
534 Ga0496120_0007609
535 Ga0496120_0018479
536 Ga0496120_0024140
537 Ga0496121_0079143
538 Ga0496121_0087455
539 Ga0496122_0000139
540 Ga0496122_0003051
541 Ga0496122_0003834
542 Ga0496122_0004677
543 Ga0496122_0009434
544 Ga0496122_0015178
545 Ga0496122_0036614
546 Ga0496122_0047160
547 Ga0496123_0002138
548 Ga0496123_0002501
549 Ga0496123_0006953
550 Ga0496124_0001617
551 Ga0496124_0002181
552 Ga0496124_0040329
553 Ga0496125_0000084
554 Ga0496125_0000780
555 Ga0496125_0004718
556 Ga0496125_0005940
557 Ga0496126_0000266
558 Ga0496126_0000395
559 Ga0496126_0000516
560 Ga0496126_0002188
561 Ga0496126_0011783
562 Ga0501311_001829
563 Ga0501316_001238
564 Ga0500566_0000713
565 Ga0500637_0008180
566 Ga0501082_0000138
567 2511697905
568 2512732383
569 2524190779
570 2540605129
571 2545559842
572 2555470940
573 2556066059
574 2563927158
575 2578337883
576 2578930799
577 2587738555
578 2595092105
579 2595318569
580 2600199983
581 2600402987
582 2601446790
583 2631985980
584 2643738230
585 2644426932
586 2644705881
587 2644713331
588 2644718583
589 2644723496
590 2644741741
591 2651529638
592 2672333491
593 2673822908
594 2674421175
595 2685153481
596 2686995227
597 2687496476
598 2695629820
599 2698319709
600 2705991930
601 2712198505
602 2717914494
603 2721503355
604 2723604751
605 2728534635
606 2730135389
607 2738817584
608 2738840619
609 2739160239
610 2739212758
611 2739234688
612 2739271836
613 2753809807
614 2757569072
615 2777762410
616 2777838603
617 2791211380
618 2793186030
619 2802437007
620 2808871081
621 2809057151
622 2812314364
623 2816866432
624 2817478092
625 2819571315
626 2819585116
627 2819629499
628 2819669376
629 2819712051
630 2819726121
631 2821114465
632 2823526315
633 2842688393
634 2842888032
635 2849145117
636 2852677287
637 2857453659
638 2857473840
639 2857586534
640 2857591228
641 2857609056
642 2857613520
643 2858439076
644 2860837481
645 2864737752
646 2864997989
647 2865003555
648 2877768700
649 2880169643
650 2881647359
651 2885527420
652 2888581036
653 2889046610
654 2889050287
655 2889280661
656 2889297385
657 2897109667
658 2904118158
659 2904163436
660 2904497034
661 2904530281
662 2904564537
663 2904595408
664 2904611491
665 2904761916
666 2907205597
667 2908669283
668 2916971959
669 2919097042
670 2919149584
671 2919165318
672 2919419144
673 2919429779
674 2919523126
675 2919726304
676 2919730713
677 2928099784
678 2928515329
679 2928521193
680 2929010047
681 2929208560
682 2929233169
683 2931390058
684 2936343241
685 2936363598
686 2938917347
687 2939596769
688 2939679952
689 2939706420
690 2945991246
691 2946053945
692 2947426635
693 2954776178
694 2956901154
695 2960323605
696 2960379238
697 2962290691
698 2964376594
699 2965761216
700 2968560322
701 2969136898
702 2969141064
703 2969766308
704 2969770392
705 2971415978
706 2971512484
707 2971893428
708 2977254793
709 2979089190
710 2980129025
711 2980178135
712 2980188803
713 2980492642
714 2981285866
715 2981290816
716 2981980568
717 2981985441
718 2984530184
719 2984536291
720 2988230610
721 2990275792
722 2996635585
723 3001272029
724 3001275847
725 3001894121
726 3006828807
727 3006858415
728 3006970069
729 3006976371
730 3006978440
731 3006980114
732 3006988408
733 3006993299
734 648170790
735 8002323609
736 8007377014
737 8022631724
738 8022655723
739 8022796030
740 8022896337
741 8022917965
742 8022952115
743 8023440730
744 8023447667
745 8046998937
746 8051956570
747 8052175047
748 8054282915
749 8054469786
750 8054804673
751 8055531855
752 8055635776
753 8056536351
754 8057477190
755 8057582701
756 8057632178
757 8057733594
758 8057979030

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01588

tRNA_bind

Putative tRNA binding domain

594

686

0.98

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

21

388

0.94

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

245

364

0.92

PF19303

Anticodon_3

Anticodon binding domain of methionyl tRNA ligase

400

555

0.88

PF01406

tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

11

185

0.87

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

4

244

0.81

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

410

562

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7wpt-assembly1.cif.gz_A methionyl-trna synthetase from staphylococcus aureus complexed with a fragment m2-80 and atp 0.9835 5 521
7wpn-assembly1.cif.gz_A methionyl-trna synthetase from staphylococcus aureus complexed with a phenylbenzimidazole inhibitor and atp 0.9799 5 521
7wpn-assembly1.cif.gz_A methionyl-trna synthetase from staphylococcus aureus complexed with a phenylbenzimidazole inhibitor and atp 0.9779 5 521
7wpk-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9778 5 521
7wpt-assembly1.cif.gz_A methionyl-trna synthetase from staphylococcus aureus complexed with a fragment m2-80 and atp 0.9775 5 521
ID Description Score Start End Superfamily
af_Q2G1R9_548_656_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9814 541 645 2.40.50.140
af_Q2G1R9_349_520_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.979 351 521 1.10.730.10
4ppwA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.971 4 349 3.40.50.620
af_Q2G1R9_349_520_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9678 351 521 1.10.730.10
5h34A00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9671 543 646 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A356BV29-F1-model_v4 Methionyl-tRNA synthetase 0.9807 1 365 GO:0004825
GO:0005524
GO:0006431
AF-U2UMX0-F1-model_v4 Lysine--tRNA ligase-like protein 0.9805 173 424 GO:0004825
GO:0005524
GO:0006431
AF-A0A7C6U1P7-F1-model_v4 Methionine--tRNA ligase subunit beta (EC 6.1.1.10) 0.9797 543 646 GO:0000049
GO:0004825
GO:0005524
GO:0006431
AF-A0A7C6VFC5-F1-model_v4 Methionyl-tRNA synthetase 0.9785 5 287 GO:0004825
GO:0005524
GO:0006431
AF-A0A532UY67-F1-model_v4 Methionine--tRNA ligase subunit beta 0.9769 544 646 GO:0000049
GO:0004825
GO:0005524
GO:0006431

Map