F428218

General Info

Members Datasets Scaffolds Average Seq Length
378 279 756 517

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|643692032|643824870
Length 589
Sequence STTWTASIIPARQARADRRRTGGTAASASGNWSRARQTLKQYGVSTFAPSRCRRAGNRDISCREAAVRIGALRERYPEEARVALTPESAVQLRKLGHNCLIEAGAGSRSGISDDAYRSVGVEVVPDARALIAASDVVVKVRSPEGDEAKSLNDGQTLISFLWPAQNPDLLETFRDKNITAVAMDMVPRISRAQKMDALSSMANIAGYRAIIEAGNQFGRFFTGQVTAAGKVQPAKVLVVGAGVAGLAAIGTAVSLGAIVHAFDVRPEVAEQIESMGANFVFLEFEANQDGAATGGYAAPSSPEFREKQLAKFRALAPEIDIVITTALIPGRPAPKLWLEDMVAMMKPGSVIVDLAAERGGNCDLTVPDQRIVSPNGVVIIGYTDFPSRMAAQASILYSTNIRHMLADLTPNKDGVINHNMEDDVIRGATVTKGGEITYPPPPPRIQAIAPAKPKEKVREPTAEEMRAAEAAAFRKQTTSQVGLLVIGALLLALIGSYVPSEFMAHIVVFALACFIGFSVIWNVSHSLHTPLMAVTNAISGIVVIGALLQIGSGNWLVVILAALSVLVATINIVGGFMVTRRMLAMFQRS

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
10 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
13 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
14 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
15 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
16 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
19 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
20 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
21 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
22 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
25 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
26 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
27 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
28 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
29 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
30 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
31 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
33 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
35 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
36 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
47 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
53 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
54 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
61 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
62 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
63 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
66 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
69 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
70 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
71 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
72 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
73 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
74 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
75 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
76 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
77 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
78 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
79 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
80 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
81 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
82 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
83 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
86 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
87 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
88 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
89 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
90 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
91 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
92 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
100 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
101 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
102 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
103 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
104 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
105 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
106 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
109 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
110 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
111 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
112 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
113 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
114 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
115 2519899620 Rhizobium sp. Pop5 Isolate Nodule
116 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
117 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
118 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
119 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
120 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
121 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
122 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
123 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
124 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
125 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
126 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
127 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
128 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
129 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
130 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
131 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
132 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
133 2643221557 Ensifer sp. Root558 Isolate Unclassified
134 2643221568 Rhizobium sp. Root564 Isolate Unclassified
135 2643221582 Rhizobium sp. Root651 Isolate Unclassified
136 2643221599 Rhizobium sp. Root708 Isolate Unclassified
137 2643221610 Ensifer sp. Root74 Isolate Unclassified
138 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
139 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
140 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
141 2643221668 Ensifer sp. Root423 Isolate Unclassified
142 2643221675 Ensifer sp. Root1298 Isolate Unclassified
143 2643221680 Ensifer sp. Root1312 Isolate Unclassified
144 2643221688 Rhizobium sp. Root482 Isolate Unclassified
145 2643221693 Rhizobium sp. Root491 Isolate Unclassified
146 2643221719 Rhizobium sp. Root274 Isolate Unclassified
147 2643221726 Ensifer sp. Root954 Isolate Unclassified
148 2718217882 Rhizobium sp. N741 Isolate Nodule
149 2718218009 Rhizobium sp. N561 Isolate Nodule
150 2718218363 Rhizobium sp. N113 Isolate Nodule
151 2718218366 Rhizobium sp. N621 Isolate Nodule
152 2721755514 Rhizobium sp. N6212 Isolate Nodule
153 2721755810 Rhizobium sp. N871 Isolate Nodule
154 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
155 2728369365 Rhizobium sp. N1341 Isolate Nodule
156 2738541293 Rhizobium sp. GV031 Isolate Unclassified
157 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
158 2773857925 Microvirga vignae BR3299 Isolate Unclassified
159 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
160 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
161 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
162 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
163 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
164 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
165 2791355260 Rhizobium sp. L9 Isolate Nodule
166 2791355261 Rhizobium sp. J15 Isolate Nodule
167 2791355262 Rhizobium sp. M1 Isolate Nodule
168 2791355263 Rhizobium chutanense C5 Isolate Nodule
169 2802429633 Rhizobium anhuiense J3 Isolate Nodule
170 2802429637 Rhizobium anhuiense C15 Isolate Nodule
171 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
172 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
173 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
174 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
175 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
176 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
177 2838061910 Rhizobium phaseoli L15 Isolate Nodule
178 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
179 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
180 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
181 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
182 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
183 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
184 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
185 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
186 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
187 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
188 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
189 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
190 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
191 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
192 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
193 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
194 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
195 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
196 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
197 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
198 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
199 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
200 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
201 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
202 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
203 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
204 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
205 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
206 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
207 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
208 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
209 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
210 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
211 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
212 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
213 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
214 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
215 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
216 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
217 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
218 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
219 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
220 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
221 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
222 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
223 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
224 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
225 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
226 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
227 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
228 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
229 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
230 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
231 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
232 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
233 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
234 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
235 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
236 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
237 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
238 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
239 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
240 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
241 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
242 2936381700 Rhizobium chutanense C16 Isolate Unclassified
243 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
244 2952252522 Salinicola sp. DM10 Isolate Unclassified
245 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
246 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
247 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
248 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
249 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
250 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
251 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
252 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
253 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
254 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
255 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
256 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
257 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
258 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
259 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
260 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
261 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
262 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
263 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
264 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
265 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
266 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
267 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
268 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
269 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
270 8005382845 Rhizobium sp. R634 Isolate Nodule
271 8005395548 Rhizobium sp. R339 Isolate Nodule
272 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
273 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
274 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
275 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
276 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
277 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
278 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
279 8056375014 Rhizobium redzepovicii 18T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 49.21
Metatranscriptomes 0
Isolates 50.79

Biome Distribution

Category Percentage (%)
Aerial Root 1.32
Bulb 0
Endosphere 17.72
Nodule 31.48
Rhizoplane 1.85
Rhizosphere 22.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000388 3300002773 Bacteria 26802
2 JGI25150J39212_1000026 3300002774 Bacteria 107804
3 JGI25150J39212_1000173 3300002774 Bacteria 36141
4 JGI25151J46595_10000019 3300003187 Bacteria 236340
5 JGI25151J46595_10000039 3300003187 Bacteria 180051
6 JGI25151J46595_10000053 3300003187 Bacteria 156841
7 JGI25151J46595_10009084 3300003187 Bacteria 4735
8 JGI25165J46597_1003915 3300003214 Bacteria 3435
9 JGI25153J46596_10000098 3300003215 Bacteria 100643
10 JGI25153J46596_10000381 3300003215 Bacteria 30337
11 JGI25153J46596_10001964 3300003215 Bacteria 12194
12 Ga0055526_1000954 3300003771 Bacteria 21381
13 Ga0055526_1003027 3300003771 Bacteria 10951
14 Ga0055526_1020130 3300003771 Bacteria 2392
15 Ga0055524_1000086 3300003775 Bacteria 116519
16 Ga0055524_1000325 3300003775 Bacteria 44894
17 Ga0055524_1000630 3300003775 Bacteria 25107
18 Ga0055524_1002669 3300003775 Bacteria 9033
19 Ga0055528_1000117 3300003790 Bacteria 62972
20 Ga0055528_1000260 3300003790 Bacteria 44906
21 Ga0055528_1003767 3300003790 Bacteria 7479
22 Ga0055540_1000228 3300003792 Bacteria 52494
23 Ga0058692_1003589 3300003856 Bacteria 4764
24 Ga0070665_100003971 3300005548 Bacteria 15597
25 Ga0075364_10000058 3300006051 Bacteria 41383
26 Ga0075369_10000826 3300006186 Bacteria 10195
27 Ga0079104_1000243 3300006946 Bacteria 72656
28 Ga0079104_1004227 3300006946 Bacteria 6245
29 Ga0099826_10000571 3300006948 Bacteria 18530
30 Ga0099826_10030846 3300006948 Bacteria 3885
31 Ga0105243_10045352 3300009148 Bacteria 3454
32 Ga0105238_10032519 3300009551 Bacteria 5308
33 Ga0123341_1000059 3300009765 Bacteria 46893
34 Ga0123341_1002561 3300009765 Bacteria 15034
35 Ga0123342_1003064 3300009766 Bacteria 27242
36 Ga0157373_10009416 3300013100 Bacteria 7214
37 Ga0157371_10000205 3300013102 Bacteria 86623
38 Ga0157370_10000714 3300013104 Bacteria 41629
39 Ga0157369_10011532 3300013105 Bacteria 10040
40 Ga0171463_1002 3300013249 Bacteria 1274851
41 Ga0182007_10000160 3300015262 Bacteria 46183
42 Ga0183363_1077 3300015690 Bacteria 29674
43 Ga0214544_1002772 3300021320 Bacteria 36640
44 Ga0214542_1001092 3300021321 Bacteria 54418
45 Ga0214543_1005400 3300021327 Bacteria 23566
46 Ga0213875_10003592 3300021388 Bacteria 8785
47 Ga0209147_100637 3300025229 Bacteria 18823
48 Ga0207425_1000104 3300025245 Bacteria 79793
49 Ga0207425_1013548 3300025245 Bacteria 1880
50 Ga0209677_100903 3300025253 Bacteria 14535
51 Ga0209129_1000163 3300025258 Bacteria 100689
52 Ga0209129_1000213 3300025258 Bacteria 67041
53 Ga0209129_1004021 3300025258 Bacteria 6023
54 Ga0209233_1000216 3300025261 Bacteria 108123
55 Ga0209673_1000055 3300025273 Bacteria 272768
56 Ga0209673_1000567 3300025273 Bacteria 59050
57 Ga0209675_1000404 3300025291 Bacteria 35625
58 Ga0209025_1000008 3300025294 Bacteria 1130876
59 Ga0209025_1000181 3300025294 Bacteria 156894
60 Ga0209025_1000228 3300025294 Bacteria 132088
61 Ga0209025_1000288 3300025294 Bacteria 113626
62 Ga0209025_1000346 3300025294 Bacteria 100696
63 Ga0209025_1005378 3300025294 Bacteria 10482
64 Ga0209564_1000041 3300025295 Bacteria 405199
65 Ga0209564_1000592 3300025295 Bacteria 57093
66 Ga0209564_1000730 3300025295 Bacteria 46914
67 Ga0209564_1010719 3300025295 Bacteria 4184
68 Ga0209758_1000156 3300025297 Bacteria 156894
69 Ga0209758_1000283 3300025297 Bacteria 100697
70 Ga0209758_1000522 3300025297 Bacteria 61516
71 Ga0209758_1000968 3300025297 Bacteria 38750
72 Ga0209758_1017852 3300025297 Bacteria 3507
73 Ga0209256_1000062 3300025299 Bacteria 253433
74 Ga0209256_1000089 3300025299 Bacteria 214426
75 Ga0209256_1000384 3300025299 Bacteria 70467
76 Ga0209256_1000691 3300025299 Bacteria 44958
77 Ga0209256_1000995 3300025299 Bacteria 33735
78 Ga0209051_1000032 3300025303 Bacteria 383445
79 Ga0209051_1000151 3300025303 Bacteria 131835
80 Ga0209257_1005067 3300025304 Bacteria 9566
81 Ga0207681_10043861 3300025923 Bacteria 2995
82 Ga0207694_10020874 3300025924 Bacteria 4959
83 Ga0209281_1000179 3300027111 Bacteria 148102
84 Ga0209281_1002952 3300027111 Bacteria 6094
85 Ga0209371_1000022 3300027312 Bacteria 536342
86 Ga0209371_1000370 3300027312 Bacteria 48496
87 Ga0209371_1003350 3300027312 Bacteria 7871
88 Ga0209282_1024178 3300027666 Bacteria 3813
89 Ga0268266_10005462 3300028379 Bacteria 11837
90 Ga0268256_1000019 3300030500 Bacteria 587949
91 Ga0265331_10008303 3300031250 Bacteria 5917
92 Ga0316576_10011987 3300031727 Bacteria 5706
93 Ga0316576_10079430 3300031727 Bacteria 2432
94 Ga0316578_10020190 3300031728 Bacteria 3678
95 Ga0307405_10000815 3300031731 Bacteria 12258
96 Ga0307406_10013324 3300031901 Bacteria 4709
97 Ga0307409_100051612 3300031995 Bacteria 3148
98 Ga0307414_10139497 3300032004 Bacteria 1896
99 Ga0316584_0035426 3300036712 Bacteria 3703
100 Ga0436364_0473196 3300037853 Bacteria 3898
101 Ga0400483_159322 3300039062 Bacteria 3091
102 Ga0400483_162777 3300039062 Bacteria 2391
103 Ga0439436_0001486 3300041404 Bacteria 6821
104 Ga0439465_0006340 3300041413 Bacteria 3758
105 Ga0439442_011514 3300042002 Bacteria 1802
106 Ga0451576_0002617 3300045051 Bacteria 26338
107 Ga0495627_000078 3300046453 Bacteria 119920
108 Ga0495627_000466 3300046453 Bacteria 34948
109 Ga0495605_0013852 3300046474 Bacteria 4431
110 Ga0495606_0004122 3300046507 Bacteria 14756
111 Ga0495606_0067828 3300046507 Bacteria 2258
112 Ga0495610_0000718 3300046512 Bacteria 31504
113 Ga0495610_0010007 3300046512 Bacteria 5927
114 Ga0495631_0001158 3300046518 Bacteria 16322
115 Ga0495632_0000001 3300046519 Bacteria 873295
116 Ga0495632_0001204 3300046519 Bacteria 21946
117 Ga0495637_0000417 3300046520 Bacteria 31220
118 Ga0495637_0030433 3300046520 Bacteria 2395
119 Ga0495643_0000020 3300046522 Bacteria 294973
120 Ga0495648_0028739 3300046524 Bacteria 3699
121 Ga0495648_0060983 3300046524 Bacteria 2242
122 Ga0495663_0000002 3300046525 Bacteria 495384
123 Ga0495622_0040086 3300046557 Bacteria 2180
124 Ga0495668_0067196 3300046616 Bacteria 1972
125 Ga0495625_0001750 3300046660 Bacteria 25112
126 Ga0495588_0013492 3300046674 Bacteria 3895
127 Ga0495671_0000016 3300046692 Bacteria 294821
128 Ga0495681_0000047 3300047470 Bacteria 110934
129 Ga0495681_0000688 3300047470 Bacteria 25777
130 Ga0495681_0001905 3300047470 Bacteria 15310
131 Ga0495681_0024169 3300047470 Bacteria 3209
132 Ga0495686_0003221 3300047472 Bacteria 14361
133 Ga0495686_0032378 3300047472 Bacteria 3384
134 Ga0496100_0040464 3300048903 Bacteria 2966
135 Ga0496101_0027485 3300048904 Bacteria 3964
136 Ga0496104_0217592 3300048907 Bacteria 1822
137 Ga0496116_0000167 3300048919 Bacteria 132540
138 Ga0496116_0006702 3300048919 Bacteria 10379
139 Ga0496116_0009033 3300048919 Bacteria 8558
140 Ga0496116_0025986 3300048919 Bacteria 4292
141 Ga0496117_0000002 3300048920 Bacteria 2483758
142 Ga0496117_0000105 3300048920 Bacteria 188970
143 Ga0496117_0118174 3300048920 Bacteria 1635
144 Ga0496118_0000168 3300048921 Bacteria 118938
145 Ga0496118_0003071 3300048921 Bacteria 21415
146 Ga0496118_0008262 3300048921 Bacteria 10794
147 Ga0496118_0030380 3300048921 Bacteria 4510
148 Ga0496118_0040350 3300048921 Bacteria 3713
149 Ga0496119_0017868 3300048922 Bacteria 5313
150 Ga0496120_0000093 3300048923 Bacteria 146905
151 Ga0496120_0055077 3300048923 Bacteria 2250
152 Ga0496121_0000216 3300048924 Bacteria 127028
153 Ga0496121_0001903 3300048924 Bacteria 33406
154 Ga0496121_0006495 3300048924 Bacteria 14467
155 Ga0496121_0050076 3300048924 Bacteria 3533
156 Ga0496122_0000004 3300048925 Bacteria 645283
157 Ga0496122_0012412 3300048925 Bacteria 8482
158 Ga0496122_0014802 3300048925 Bacteria 7516
159 Ga0496122_0042260 3300048925 Bacteria 3588
160 Ga0496123_0000007 3300048926 Bacteria 645283
161 Ga0496123_0059194 3300048926 Bacteria 2479
162 Ga0496123_0077842 3300048926 Bacteria 2034
163 Ga0496124_0001829 3300048927 Bacteria 29406
164 Ga0496124_0002688 3300048927 Bacteria 22761
165 Ga0496124_0009970 3300048927 Bacteria 9705
166 Ga0496124_0017445 3300048927 Bacteria 6765
167 Ga0496124_0021803 3300048927 Bacteria 5892
168 Ga0496125_0002487 3300048928 Bacteria 23860
169 Ga0496125_0013012 3300048928 Bacteria 8213
170 Ga0496125_0037975 3300048928 Bacteria 4178
171 Ga0496125_0069222 3300048928 Bacteria 2771
172 Ga0496126_0002784 3300048929 Bacteria 23033
173 Ga0496126_0071193 3300048929 Bacteria 3096
174 Ga0495678_037268 3300049459 Bacteria 1977
175 Ga0501034_0004294 3300049571 Bacteria 15879
176 Ga0501044_0120050 3300049823 Bacteria 2631
177 nmdc:mga00v17_251_c1 3300050491 Bacteria 31506
178 nmdc:mga00v17_42_c1 3300050491 Bacteria 79984
179 nmdc:mga06z11_9946_c1 3300050494 Bacteria 4031
180 Ga0500560_014630 3300053107 Bacteria 2097
181 Ga0500594_0000181 3300053118 Bacteria 16015
182 Ga0500618_000184 3300053125 Bacteria 51349
183 Ga0500658_0000025 3300053134 Bacteria 113309
184 Ga0500561_0000368 3300053137 Bacteria 7436
185 Ga0500624_001944 3300053157 Bacteria 2958
186 Ga0501082_0184804 3300060353 Bacteria 1814
187 643824870 643692032 Bacteria 6891900
188 2509076373 2508501114 Bacteria 7082538
189 2510841563 2510461069 Bacteria 5505000
190 2511388633 2511231027 Bacteria 5013807
191 2514000584 2513237159 Bacteria 6810126
192 2514001376 2513237159 Bacteria 6810126
193 2515632974 2515154113 Bacteria 7807172
194 2515640515 2515154114 Bacteria 7848616
195 2520381108 2519899620 Bacteria 6499161
196 2524453171 2524023207 Bacteria 6813453
197 2524454189 2524023207 Bacteria 6813453
198 2524461812 2524023209 Bacteria 6679728
199 2537875870 2537561587 Bacteria 5425293
200 2554248635 2554235003 Bacteria 5877155
201 2558862668 2558860100 Bacteria 8458965
202 2559295723 2558860242 Bacteria 5568029
203 2585268731 2582581306 Bacteria 6450535
204 2585329086 2582581315 Bacteria 7318924
205 2585389377 2582581865 Bacteria 6644329
206 2585532865 2585427527 Bacteria 7273426
207 2585553768 2585427530 Bacteria 7383882
208 2585824807 2585427590 Bacteria 6824633
209 2585846175 2585427594 Bacteria 6180594
210 2599602047 2599185210 Bacteria 5624189
211 2600192924 2599185352 Bacteria 7228948
212 2601609702 2600255279 Bacteria 5605316
213 2601746477 2600255308 Bacteria 5611129
214 2643808872 2643221557 Bacteria 7184309
215 2643857989 2643221568 Bacteria 5187270
216 2643919958 2643221582 Bacteria 5804683
217 2644008050 2643221599 Bacteria 6292121
218 2644064309 2643221610 Bacteria 7480339
219 2644154269 2643221627 Bacteria 6761570
220 2644194348 2643221634 Bacteria 6705461
221 2644299368 2643221653 Bacteria 4569637
222 2644376476 2643221668 Bacteria 7306521
223 2644416140 2643221675 Bacteria 7473456
224 2644449181 2643221680 Bacteria 7473610
225 2644494010 2643221688 Bacteria 5260751
226 2644523310 2643221693 Bacteria 5513853
227 2644657596 2643221719 Bacteria 4568197
228 2644691994 2643221726 Bacteria 7455827
229 2719184985 2718217882 Bacteria 6556348
230 2719729005 2718218009 Bacteria 6478651
231 2721144696 2718218363 Bacteria 6524337
232 2721162062 2718218366 Bacteria 6425255
233 2722843207 2721755514 Bacteria 6424414
234 2724042030 2721755810 Bacteria 6479005
235 2724113469 2721755823 Bacteria 6752556
236 2730161100 2728369365 Bacteria 6555560
237 2738802976 2738541293 Bacteria 7065685
238 2738944618 2738541317 Bacteria 5340176
239 2774873268 2773857925 Bacteria 6472445
240 2776263073 2775506901 Bacteria 9631051
241 2776265122 2775506901 Bacteria 9631051
242 2776266407 2775506901 Bacteria 9631051
243 2776268243 2775506902 Bacteria 6208009
244 2776283917 2775506904 Bacteria 5954060
245 2776914720 2775507049 Bacteria 6284736
246 2778176650 2775507266 Bacteria 7392367
247 2792641182 2791355094 Bacteria 7011481
248 2793324135 2791355260 Bacteria 6598818
249 2793331350 2791355261 Bacteria 6661293
250 2793331563 2791355261 Bacteria 6661293
251 2793331582 2791355261 Bacteria 6661293
252 2793336142 2791355262 Bacteria 6774204
253 2793344642 2791355263 Bacteria 6872478
254 2793344668 2791355263 Bacteria 6872478
255 2806043331 2802429633 Bacteria 7341974
256 2806076239 2802429637 Bacteria 7067217
257 2808987542 2808606387 Bacteria 5697198
258 2819243940 2818991272 Bacteria 4622173
259 2819559441 2818991439 Bacteria 6907412
260 2819642573 2818991453 Bacteria 7181617
261 2819642866 2818991453 Bacteria 7181617
262 2821126481 2821123053 Bacteria 7836056
263 2834579190 2834578030 Bacteria 3530182
264 2838064543 2838061910 Bacteria 6794874
265 2838064581 2838061910 Bacteria 6794874
266 2838675382 2838675328 Bacteria 4909118
267 2838714263 2838714209 Bacteria 5525906
268 2838721935 2838719591 Bacteria 5523910
269 2838725024 2838724970 Bacteria 4908691
270 2838735665 2838729681 Bacteria 7400765
271 2838737043 2838736955 Bacteria 5760694
272 2838748567 2838742623 Bacteria 7396178
273 2841842588 2841840854 Bacteria 5761912
274 2841848914 2841846520 Bacteria 5345850
275 2841854325 2841851746 Bacteria 7532261
276 2841862583 2841859092 Bacteria 5436171
277 2841964573 2841957949 Bacteria 8652217
278 2842125055 2842124991 Bacteria 5346824
279 2842130277 2842130223 Bacteria 4909145
280 2842142368 2842140634 Bacteria 5759631
281 2842154553 2842152218 Bacteria 4908957
282 2842170506 2842170452 Bacteria 5525737
283 2842178173 2842175837 Bacteria 4908771
284 2842187372 2842187318 Bacteria 5524014
285 2842193714 2842192696 Bacteria 6147454
286 2842211683 2842211629 Bacteria 5523832
287 2842226697 2842224351 Bacteria 5524473
288 2842232835 2842229732 Bacteria 7475766
289 2842246922 2842243621 Bacteria 7421798
290 2842259392 2842257432 Bacteria 7401195
291 2842270040 2842264693 Bacteria 6472963
292 2842270077 2842264693 Bacteria 6472963
293 2842303286 2842298080 Bacteria 6123127
294 2842309102 2842304105 Bacteria 7023636
295 2842316074 2842311132 Bacteria 6616990
296 2842323559 2842317721 Bacteria 6793725
297 2842340792 2842333319 Bacteria 8899485
298 2842433854 2842428310 Bacteria 6767288
299 2842433891 2842428310 Bacteria 6767288
300 2842440230 2842434925 Bacteria 6502746
301 2842440267 2842434925 Bacteria 6502746
302 2842446944 2842441272 Bacteria 6769273
303 2842446981 2842441272 Bacteria 6769273
304 2842474799 2842469257 Bacteria 6752936
305 2842474836 2842469257 Bacteria 6752936
306 2842488507 2842482326 Bacteria 7212537
307 2842514866 2842509118 Bacteria 6850950
308 2842515166 2842509118 Bacteria 6850950
309 2842519367 2842515876 Bacteria 5436280
310 2842523569 2842521101 Bacteria 6569494
311 2842526998 2842521101 Bacteria 6569494
312 2844460774 2844454524 Bacteria 7952546
313 2854681749 2854681122 Bacteria 4548679
314 2857533043 2857531043 Bacteria 6754041
315 2876399831 2876392853 Bacteria 6660880
316 2882460711 2882456835 Bacteria 6863978
317 2894235197 2894232714 Bacteria 8834183
318 2894822277 2894817345 Bacteria 4892941
319 2896385552 2896384573 Bacteria 7700774
320 2899260397 2899259804 Bacteria 3320927
321 2899795734 2899792073 Bacteria 4926588
322 2899804083 2899803654 Bacteria 5577784
323 2899848931 2899845264 Bacteria 5672268
324 2904666354 2904659560 Bacteria 6685615
325 2913309239 2913308742 Bacteria 5350706
326 2919114294 2919114240 Bacteria 5700270
327 2919171053 2919166419 Bacteria 4952238
328 2919690730 2919688452 Bacteria 4595932
329 2921254345 2921250672 Bacteria 6677771
330 2921263305 2921257292 Bacteria 6808382
331 2926755314 2926754445 Bacteria 5964435
332 2926762425 2926760298 Bacteria 5505990
333 2933009198 2933006813 Bacteria 4912075
334 2933014462 2933011516 Bacteria 5439334
335 2933575489 2933570622 Bacteria 7023390
336 2933596212 2933594066 Bacteria 5594265
337 2936382919 2936381700 Bacteria 7006523
338 2936388366 2936381700 Bacteria 7006523
339 2937024421 2937023124 Bacteria 6815156
340 2952253309 2952252522 Bacteria 4171745
341 2957385892 2957382221 Bacteria 6737050
342 2957400605 2957395598 Bacteria 6822399
343 2957406077 2957402308 Bacteria 6741770
344 2961114824 2961114664 Bacteria 6680456
345 2964620971 2964615318 Bacteria 6809089
346 2967756053 2967755722 Bacteria 6814706
347 2968117853 2968110612 Bacteria 6814636
348 2970103825 2970102677 Bacteria 6812532
349 2978970489 2978969890 Bacteria 5400756
350 2979092304 2979089926 Bacteria 5670289
351 2979100307 2979095461 Bacteria 5669583
352 2979104292 2979100975 Bacteria 5423623
353 2984511128 2984509177 Bacteria 5274802
354 2984522510 2984518228 Bacteria 5277463
355 2984541814 2984537506 Bacteria 5277481
356 2984587507 2984587000 Bacteria 5263363
357 2984604169 2984601300 Bacteria 5455244
358 2989780475 2989776772 Bacteria 4843317
359 3000018516 3000017691 Bacteria 3772574
360 3000407540 3000405567 Bacteria 3779330
361 3005457928 3005452660 Bacteria 5889319
362 643822312 643692032 Bacteria 6891900
363 650740935 650716007 Bacteria 5573770
364 8002290623 8002285264 Bacteria 6717907
365 8003572008 8003570095 Bacteria 5747666
366 8005248213 8005246636 Bacteria 4933972
367 8005383709 8005382845 Bacteria 6732062
368 8005399187 8005395548 Bacteria 6806915
369 8005434915 8005430974 Bacteria 6689030
370 8005628957 8005626139 Bacteria 6534237
371 8005629007 8005626139 Bacteria 6534237
372 8005661663 8005658619 Bacteria 4500593
373 8018152360 8018150411 Bacteria 5549903
374 8024489423 8024486573 Bacteria 6540512
375 8045866083 8045864390 Bacteria 5043873
376 8045868903 8045864390 Bacteria 5043873
377 8049296983 8049293176 Bacteria 6128433
378 8056381968 8056375014 Bacteria 7006639
379 JGI25152J39213_1000388
380 JGI25150J39212_1000026
381 JGI25150J39212_1000173
382 JGI25151J46595_10000019
383 JGI25151J46595_10000039
384 JGI25151J46595_10000053
385 JGI25151J46595_10009084
386 JGI25165J46597_1003915
387 JGI25153J46596_10000098
388 JGI25153J46596_10000381
389 JGI25153J46596_10001964
390 Ga0055526_1000954
391 Ga0055526_1003027
392 Ga0055526_1020130
393 Ga0055524_1000086
394 Ga0055524_1000325
395 Ga0055524_1000630
396 Ga0055524_1002669
397 Ga0055528_1000117
398 Ga0055528_1000260
399 Ga0055528_1003767
400 Ga0055540_1000228
401 Ga0058692_1003589
402 Ga0070665_100003971
403 Ga0075364_10000058
404 Ga0075369_10000826
405 Ga0079104_1000243
406 Ga0079104_1004227
407 Ga0099826_10000571
408 Ga0099826_10030846
409 Ga0105243_10045352
410 Ga0105238_10032519
411 Ga0123341_1000059
412 Ga0123341_1002561
413 Ga0123342_1003064
414 Ga0157373_10009416
415 Ga0157371_10000205
416 Ga0157370_10000714
417 Ga0157369_10011532
418 Ga0171463_1002
419 Ga0182007_10000160
420 Ga0183363_1077
421 Ga0214544_1002772
422 Ga0214542_1001092
423 Ga0214543_1005400
424 Ga0213875_10003592
425 Ga0209147_100637
426 Ga0207425_1000104
427 Ga0207425_1013548
428 Ga0209677_100903
429 Ga0209129_1000163
430 Ga0209129_1000213
431 Ga0209129_1004021
432 Ga0209233_1000216
433 Ga0209673_1000055
434 Ga0209673_1000567
435 Ga0209675_1000404
436 Ga0209025_1000008
437 Ga0209025_1000181
438 Ga0209025_1000228
439 Ga0209025_1000288
440 Ga0209025_1000346
441 Ga0209025_1005378
442 Ga0209564_1000041
443 Ga0209564_1000592
444 Ga0209564_1000730
445 Ga0209564_1010719
446 Ga0209758_1000156
447 Ga0209758_1000283
448 Ga0209758_1000522
449 Ga0209758_1000968
450 Ga0209758_1017852
451 Ga0209256_1000062
452 Ga0209256_1000089
453 Ga0209256_1000384
454 Ga0209256_1000691
455 Ga0209256_1000995
456 Ga0209051_1000032
457 Ga0209051_1000151
458 Ga0209257_1005067
459 Ga0207681_10043861
460 Ga0207694_10020874
461 Ga0209281_1000179
462 Ga0209281_1002952
463 Ga0209371_1000022
464 Ga0209371_1000370
465 Ga0209371_1003350
466 Ga0209282_1024178
467 Ga0268266_10005462
468 Ga0268256_1000019
469 Ga0265331_10008303
470 Ga0316576_10011987
471 Ga0316576_10079430
472 Ga0316578_10020190
473 Ga0307405_10000815
474 Ga0307406_10013324
475 Ga0307409_100051612
476 Ga0307414_10139497
477 Ga0316584_0035426
478 Ga0436364_0473196
479 Ga0400483_159322
480 Ga0400483_162777
481 Ga0439436_0001486
482 Ga0439465_0006340
483 Ga0439442_011514
484 Ga0451576_0002617
485 Ga0495627_000078
486 Ga0495627_000466
487 Ga0495605_0013852
488 Ga0495606_0004122
489 Ga0495606_0067828
490 Ga0495610_0000718
491 Ga0495610_0010007
492 Ga0495631_0001158
493 Ga0495632_0000001
494 Ga0495632_0001204
495 Ga0495637_0000417
496 Ga0495637_0030433
497 Ga0495643_0000020
498 Ga0495648_0028739
499 Ga0495648_0060983
500 Ga0495663_0000002
501 Ga0495622_0040086
502 Ga0495668_0067196
503 Ga0495625_0001750
504 Ga0495588_0013492
505 Ga0495671_0000016
506 Ga0495681_0000047
507 Ga0495681_0000688
508 Ga0495681_0001905
509 Ga0495681_0024169
510 Ga0495686_0003221
511 Ga0495686_0032378
512 Ga0496100_0040464
513 Ga0496101_0027485
514 Ga0496104_0217592
515 Ga0496116_0000167
516 Ga0496116_0006702
517 Ga0496116_0009033
518 Ga0496116_0025986
519 Ga0496117_0000002
520 Ga0496117_0000105
521 Ga0496117_0118174
522 Ga0496118_0000168
523 Ga0496118_0003071
524 Ga0496118_0008262
525 Ga0496118_0030380
526 Ga0496118_0040350
527 Ga0496119_0017868
528 Ga0496120_0000093
529 Ga0496120_0055077
530 Ga0496121_0000216
531 Ga0496121_0001903
532 Ga0496121_0006495
533 Ga0496121_0050076
534 Ga0496122_0000004
535 Ga0496122_0012412
536 Ga0496122_0014802
537 Ga0496122_0042260
538 Ga0496123_0000007
539 Ga0496123_0059194
540 Ga0496123_0077842
541 Ga0496124_0001829
542 Ga0496124_0002688
543 Ga0496124_0009970
544 Ga0496124_0017445
545 Ga0496124_0021803
546 Ga0496125_0002487
547 Ga0496125_0013012
548 Ga0496125_0037975
549 Ga0496125_0069222
550 Ga0496126_0002784
551 Ga0496126_0071193
552 Ga0495678_037268
553 Ga0501034_0004294
554 Ga0501044_0120050
555 nmdc:mga00v17_251_c1
556 nmdc:mga00v17_42_c1
557 nmdc:mga06z11_9946_c1
558 Ga0500560_014630
559 Ga0500594_0000181
560 Ga0500618_000184
561 Ga0500658_0000025
562 Ga0500561_0000368
563 Ga0500624_001944
564 Ga0501082_0184804
565 643824870
566 2509076373
567 2510841563
568 2511388633
569 2514000584
570 2514001376
571 2515632974
572 2515640515
573 2520381108
574 2524453171
575 2524454189
576 2524461812
577 2537875870
578 2554248635
579 2558862668
580 2559295723
581 2585268731
582 2585329086
583 2585389377
584 2585532865
585 2585553768
586 2585824807
587 2585846175
588 2599602047
589 2600192924
590 2601609702
591 2601746477
592 2643808872
593 2643857989
594 2643919958
595 2644008050
596 2644064309
597 2644154269
598 2644194348
599 2644299368
600 2644376476
601 2644416140
602 2644449181
603 2644494010
604 2644523310
605 2644657596
606 2644691994
607 2719184985
608 2719729005
609 2721144696
610 2721162062
611 2722843207
612 2724042030
613 2724113469
614 2730161100
615 2738802976
616 2738944618
617 2774873268
618 2776263073
619 2776265122
620 2776266407
621 2776268243
622 2776283917
623 2776914720
624 2778176650
625 2792641182
626 2793324135
627 2793331350
628 2793331563
629 2793331582
630 2793336142
631 2793344642
632 2793344668
633 2806043331
634 2806076239
635 2808987542
636 2819243940
637 2819559441
638 2819642573
639 2819642866
640 2821126481
641 2834579190
642 2838064543
643 2838064581
644 2838675382
645 2838714263
646 2838721935
647 2838725024
648 2838735665
649 2838737043
650 2838748567
651 2841842588
652 2841848914
653 2841854325
654 2841862583
655 2841964573
656 2842125055
657 2842130277
658 2842142368
659 2842154553
660 2842170506
661 2842178173
662 2842187372
663 2842193714
664 2842211683
665 2842226697
666 2842232835
667 2842246922
668 2842259392
669 2842270040
670 2842270077
671 2842303286
672 2842309102
673 2842316074
674 2842323559
675 2842340792
676 2842433854
677 2842433891
678 2842440230
679 2842440267
680 2842446944
681 2842446981
682 2842474799
683 2842474836
684 2842488507
685 2842514866
686 2842515166
687 2842519367
688 2842523569
689 2842526998
690 2844460774
691 2854681749
692 2857533043
693 2876399831
694 2882460711
695 2894235197
696 2894822277
697 2896385552
698 2899260397
699 2899795734
700 2899804083
701 2899848931
702 2904666354
703 2913309239
704 2919114294
705 2919171053
706 2919690730
707 2921254345
708 2921263305
709 2926755314
710 2926762425
711 2933009198
712 2933014462
713 2933575489
714 2933596212
715 2936382919
716 2936388366
717 2937024421
718 2952253309
719 2957385892
720 2957400605
721 2957406077
722 2961114824
723 2964620971
724 2967756053
725 2968117853
726 2970103825
727 2978970489
728 2979092304
729 2979100307
730 2979104292
731 2984511128
732 2984522510
733 2984541814
734 2984587507
735 2984604169
736 2989780475
737 3000018516
738 3000407540
739 3005457928
740 643822312
741 650740935
742 8002290623
743 8003572008
744 8005248213
745 8005383709
746 8005399187
747 8005434915
748 8005628957
749 8005629007
750 8005661663
751 8018152360
752 8024489423
753 8045866083
754 8045868903
755 8049296983
756 8056381968

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05222

AlaDh_PNT_N

Alanine dehydrogenase/PNT, N-terminal domain

70

205

0.99

PF01262

AlaDh_PNT_C

Alanine dehydrogenase/PNT, C-terminal domain

209

439

0.98

PF12769

PNTB_4TM

4TM region of pyridine nucleotide transhydrogenase, mitoch

505

588

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1x14-assembly1.cif.gz_A crystal structure of e. coli transhydrogenase domain i with bound nad 0.9646 4 378
1x15-assembly1.cif.gz_B crystal structure of e. coli transhydrogenase domain i with bound nadh 0.9621 4 378
1x15-assembly1.cif.gz_A crystal structure of e. coli transhydrogenase domain i with bound nadh 0.9619 4 378
1x13-assembly1.cif.gz_A crystal structure of e. coli transhydrogenase domain i 0.9605 4 378
1x14-assembly1.cif.gz_B crystal structure of e. coli transhydrogenase domain i with bound nad 0.96 2 378
ID Description Score Start End Superfamily
1x13B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9681 4 378 3.40.50.720
3p2yA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9606 3 139 3.40.50.720
2eezG01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9546 3 122 3.40.50.720
af_P9WQB1_2_113_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9516 5 114 3.40.50.720
1l7dA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9498 5 139 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1H3GMQ9-F1-model_v4 proton-translocating NAD(P)(+) transhydrogenase (EC 7.1.1.1) 0.9951 3 96 GO:0005886
GO:0006740
GO:0050661
AF-A0A357X9X1-F1-model_v4 deleted 0.9931 8 117
AF-Q39LR8-F1-model_v4 proton-translocating NAD(P)(+) transhydrogenase (EC 7.1.1.1) 0.9926 1 81 GO:0006740
GO:0008750
GO:0016491
GO:0050661
AF-A0A521FVF7-F1-model_v4 proton-translocating NAD(P)(+) transhydrogenase (EC 7.1.1.1) 0.99 3 81 GO:0005886
GO:0006740
GO:0016491
GO:0050661
AF-A0A7W8XBS4-F1-model_v4 proton-translocating NAD(P)(+) transhydrogenase (EC 7.1.1.1) 0.9893 20 129 GO:0005886
GO:0006740
GO:0016491
GO:0050661

Map