F427942

General Info

Members Datasets Scaffolds Average Seq Length
378 289 288 844

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100004932|Ga0070694_1000049324
Length 962
Sequence MVTRRTPSRRKPKPDPPASLDKYRSMRDFEKTSEPSPETLAPEGTEEHGGRLLWIIQKHDATRLHYDFRLEVDGVLKSWPIPKGPSLDPKDKRLAVMTEDHPMSYASFEGVIPKGEYGGGPVIVWDAGTYSPDEDAIFNWDDREEAQRRMREGIEKGKISVFLRGQKLKGSFTLVKLANSAKGNDWLFIKHKDRWADPDRDVILEDRSVISGLSIAELKAGRLPDPSQARFIVHPQDAEGAKKTPFPKNVEPMQATLTDEAFDNPDWYFEPKMDGVRAIVYIDGDSVRIQSRSGLDSTRQYPTIVAEMAGQTERQTILDGEIVALDERGVPSFQTIQQRLNLSRDAEIRKLDEQIPVYFYAFDLLYAGGYDLRAAQLRDRKILLHQLLLPTDHIFLLDHFEEDGIASFRGAVAAGFEGVMAKKRDSLYESGRRSQAWRKVKGTLEDEFVVGGWTGGTGGRSKTFGSLLVGQYDDKGRLVYNGNVGTGFNERTLAKLLDKLGSLKVDKSPFDVMTPGSSRFGRPKDVPIYWAKPELVARVKFAEWTNDGHLRAPSFLGLRDDKAARDVHREAKKTRGKAKESNDSPSIDGRKPTSKRRKTSVQPEVDPIVGDVLEQLEQERQEFKLRVGEHKVPLTNLDKPLWPAYKDVRPLTKRDLLRYLAKVSPYLLPHMRGRPITLTRYPNGIAAKHFYQKHWDQGELPRFVDPVIVWSSQFNVDQEYLLCNNLPTLLWLGQLADIELHTWYSRVDREPDGFGLPKYTGGGEEAFDESILNYPDFIVFDLDPYIYAGHEKKGEEPELNRKAFLKTCDVAFWLKDLLDSMSLSSFVKTTGKTGLHIYVPIIRHFTYDEVRSAAETIGRFLMLAHPKDITMEWHTAKRAGKIFFDHGQNTKGKTLASLYSARPVPWAGVSMPVRWDELRDIYPTHFTIQNACDRLAETGDLWHNIVQEKHDLAAMLSAVKDE

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
3 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
4 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
5 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
6 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
7 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
8 2519899620 Rhizobium sp. Pop5 Isolate Nodule
9 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
10 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
11 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
12 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
13 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
14 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
15 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
16 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
17 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
18 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
19 2643221568 Rhizobium sp. Root564 Isolate Unclassified
20 2643221584 Caulobacter sp. Root656 Isolate Unclassified
21 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
22 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
23 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
24 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
25 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
26 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
27 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
28 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
29 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
30 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
31 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
32 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
33 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
34 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
35 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
36 2791355256 Rhizobium sp. M10 Isolate Nodule
37 2791355260 Rhizobium sp. L9 Isolate Nodule
38 2791355261 Rhizobium sp. J15 Isolate Nodule
39 2791355262 Rhizobium sp. M1 Isolate Nodule
40 2802429634 Rhizobium anhuiense S10 Isolate Nodule
41 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
42 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
43 2802429637 Rhizobium anhuiense C15 Isolate Nodule
44 2818991435 Caulobacter henricii 536 Isolate Unclassified
45 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
46 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
47 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
48 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
49 2838048938 Rhizobium pisi 27/80 Isolate Nodule
50 2838061910 Rhizobium phaseoli L15 Isolate Nodule
51 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
52 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
53 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
54 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
55 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
56 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
57 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
58 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
59 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
60 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
61 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
62 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
63 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
64 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
65 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
66 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
67 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
68 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
69 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
70 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
71 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
72 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
73 2933599457 Rhizobium phaseoli M3 Isolate Nodule
74 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
75 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
76 2996887358 Rhizobium sp. R711 Isolate Nodule
77 2996893221 Rhizobium sp. R635 Isolate Nodule
78 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
79 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
80 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
81 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
82 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
83 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
84 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
85 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
86 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
87 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
88 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
89 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
90 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
91 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
92 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
93 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
94 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
95 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
96 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
97 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
98 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
99 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
100 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
101 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
102 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
103 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
104 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
105 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
106 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
107 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
108 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
109 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
110 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
111 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
112 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
113 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
114 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
115 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
116 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
117 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
118 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
119 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
120 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
121 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
122 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
123 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
124 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
125 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
126 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
127 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
128 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
129 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
130 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
131 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
132 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
133 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
134 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
135 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
136 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
137 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
138 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
139 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
140 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
141 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
142 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
143 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
145 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
146 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
147 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
148 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
149 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
150 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
151 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
152 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
165 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
166 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
167 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
168 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
169 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
170 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
171 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
172 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
173 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
174 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
175 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
176 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
177 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
178 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
179 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
180 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
181 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
182 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
183 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
184 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
185 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
186 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
187 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
188 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
189 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
190 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
191 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
192 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
193 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
194 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
195 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
196 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
197 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
198 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
199 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
200 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
201 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
202 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
203 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
204 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
205 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
206 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
207 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
208 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
209 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
210 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
211 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
212 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
213 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
214 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
215 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
216 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
217 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
218 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
219 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
220 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
221 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
222 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
223 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
224 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
225 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
226 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
227 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
228 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
229 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
230 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
231 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
232 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
233 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
234 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
235 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
236 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
237 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
238 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
239 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
240 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
241 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
242 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
243 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
244 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
245 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
246 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
247 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
248 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
249 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
250 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
251 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
252 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
253 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
254 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
255 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
256 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
257 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
258 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
259 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
260 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
261 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
262 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
263 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
264 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
265 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
266 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
267 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
268 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
269 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
270 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
271 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
272 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
273 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
274 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
275 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
276 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
277 8005258706 Rhizobium sp. R693 Isolate Nodule
278 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
279 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
280 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
281 8005321885 Rhizobium sp. R72 Isolate Nodule
282 8005382845 Rhizobium sp. R634 Isolate Nodule
283 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
284 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
285 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
286 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
287 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
288 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
289 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 76.19
Metatranscriptomes 0
Isolates 23.81

Biome Distribution

Category Percentage (%)
Aerial Root 0.26
Bulb 0
Endosphere 26.46
Nodule 16.67
Rhizoplane 3.17
Rhizosphere 41.27
Stem 0
Stem Tuber 0
Unclassified 12.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2244174 2162886007 Bacteria 28845
2 SwRhRL2b_contig_902721 2162886007 Bacteria 13539
3 JGI25158J39367_1000045 3300002739 Bacteria 27880
4 JGI25152J39213_1001053 3300002773 Bacteria 13106
5 JGI25152J39213_1001089 3300002773 Bacteria 12753
6 JGI25159J45721_1003666 3300002987 Bacteria 5336
7 JGI25151J46595_10000504 3300003187 Bacteria 36683
8 JGI25151J46595_10001434 3300003187 Bacteria 16205
9 JGI25165J46597_1000071 3300003214 Bacteria 193222
10 JGI25153J46596_10000086 3300003215 Bacteria 111778
11 JGI25153J46596_10010418 3300003215 Bacteria 4205
12 rootH2_10034842 3300003320 Bacteria 27782
13 rootH1_10287881 3300003323 Bacteria 10611
14 JGI25160J50197_1001055 3300003354 Bacteria 14173
15 JGI25160J50197_1005400 3300003354 Bacteria 5326
16 JGI25161J50226_1000122 3300003374 Bacteria 56906
17 Ga0055526_1000629 3300003771 Bacteria 27380
18 Ga0055526_1001860 3300003771 Bacteria 14614
19 Ga0055526_1002359 3300003771 Bacteria 12816
20 Ga0055524_1002589 3300003775 Bacteria 9210
21 Ga0055524_1004808 3300003775 Bacteria 6156
22 Ga0055536_1000009 3300003781 Bacteria 311572
23 Ga0055528_1000530 3300003790 Bacteria 29507
24 Ga0055528_1002254 3300003790 Bacteria 10495
25 Ga0055528_1005511 3300003790 Bacteria 5877
26 Ga0055530_10000316 3300003791 Bacteria 43672
27 Ga0055543_1000059 3300004625 Bacteria 100942
28 Ga0055543_1000277 3300004625 Bacteria 37789
29 Ga0065165_1011103 3300005262 Bacteria 3803
30 Ga0065704_10000199 3300005289 Bacteria 297176
31 Ga0065704_10076542 3300005289 Bacteria 5083
32 Ga0070680_100000002 3300005336 Bacteria 211003
33 Ga0070660_100008432 3300005339 Bacteria 7206
34 Ga0070668_100012984 3300005347 Bacteria 6203
35 Ga0070669_100000205 3300005353 Bacteria 50318
36 Ga0070671_100013543 3300005355 Bacteria 6576
37 Ga0070694_100004932 3300005444 Bacteria 8048
38 Ga0070708_100001573 3300005445 Bacteria 17485
39 Ga0070708_100001963 3300005445 Bacteria 15859
40 Ga0070708_100009853 3300005445 Bacteria 7719
41 Ga0070708_100024991 3300005445 Bacteria 5104
42 Ga0070706_100003395 3300005467 Bacteria 15702
43 Ga0070706_100049589 3300005467 Bacteria 3874
44 Ga0070707_100015688 3300005468 Bacteria 7113
45 Ga0070707_100021726 3300005468 Bacteria 6065
46 Ga0070698_100040714 3300005471 Bacteria 4774
47 Ga0070679_100000831 3300005530 Bacteria 26835
48 Ga0070695_100004466 3300005545 Bacteria 8220
49 Ga0070695_100009500 3300005545 Bacteria 5792
50 Ga0070665_100001859 3300005548 Bacteria 23952
51 Ga0070665_100037154 3300005548 Bacteria 4898
52 Ga0068855_100005719 3300005563 Bacteria 15182
53 Ga0068855_100009110 3300005563 Bacteria 11990
54 Ga0068859_100011422 3300005617 Bacteria 8928
55 Ga0068858_100000093 3300005842 Bacteria 93236
56 Ga0068862_100000804 3300005844 Bacteria 31147
57 Ga0075365_10000324 3300006038 Bacteria 16910
58 Ga0075367_10018504 3300006178 Archaea 3846
59 Ga0075428_100032908 3300006844 Bacteria 5725
60 Ga0075431_100004849 3300006847 Bacteria 13249
61 Ga0075433_10004859 3300006852 Bacteria 10513
62 Ga0075433_10026187 3300006852 Bacteria 4934
63 Ga0075429_100031007 3300006880 Bacteria 4646
64 Ga0097620_100011422 3300006931 Bacteria 8928
65 Ga0105240_10104948 3300009093 Bacteria 3431
66 Ga0111539_10008802 3300009094 Bacteria 12802
67 Ga0105245_10002421 3300009098 Bacteria 16883
68 Ga0114129_10009999 3300009147 Bacteria 13520
69 Ga0114129_10030143 3300009147 Bacteria 7683
70 Ga0114129_10076582 3300009147 Bacteria 4657
71 Ga0105238_10000003 3300009551 Bacteria 422077
72 Ga0105238_10010547 3300009551 Bacteria 9279
73 Ga0105249_10029950 3300009553 Bacteria 4917
74 Ga0105239_10001290 3300010375 Bacteria 33815
75 Ga0157373_10000015 3300013100 Bacteria 183381
76 Ga0157371_10000293 3300013102 Bacteria 67201
77 Ga0157371_10009237 3300013102 Bacteria 7778
78 Ga0157370_10002502 3300013104 Bacteria 22155
79 Ga0157374_10000758 3300013296 Bacteria 28222
80 Ga0157372_10000212 3300013307 Bacteria 65077
81 Ga0182007_10007279 3300015262 Bacteria 4655
82 Ga0183363_1007 3300015690 Bacteria 315687
83 Ga0209436_100006 3300025208 Bacteria 150277
84 Ga0207425_1003352 3300025245 Bacteria 5164
85 Ga0209129_1000016 3300025258 Bacteria 485491
86 Ga0209129_1000401 3300025258 Bacteria 34402
87 Ga0209129_1000613 3300025258 Bacteria 24014
88 Ga0209129_1000761 3300025258 Bacteria 20501
89 Ga0209129_1005379 3300025258 Bacteria 4562
90 Ga0209233_1000140 3300025261 Bacteria 193274
91 Ga0209233_1000703 3300025261 Bacteria 15734
92 Ga0209565_1000049 3300025263 Bacteria 224447
93 Ga0209455_1004983 3300025272 Bacteria 4211
94 Ga0209673_1000005 3300025273 Bacteria 692788
95 Ga0209673_1000709 3300025273 Bacteria 46936
96 Ga0209673_1000721 3300025273 Bacteria 45887
97 Ga0209673_1001112 3300025273 Bacteria 30008
98 Ga0209673_1002738 3300025273 Bacteria 11593
99 Ga0209673_1003785 3300025273 Bacteria 8594
100 Ga0209673_1004023 3300025273 Bacteria 8146
101 Ga0209130_1000002 3300025284 Bacteria 722648
102 Ga0209676_1000001 3300025292 Bacteria 1852142
103 Ga0209676_1008888 3300025292 Bacteria 4415
104 Ga0209025_1000126 3300025294 Bacteria 200866
105 Ga0209025_1000574 3300025294 Bacteria 66723
106 Ga0209025_1002330 3300025294 Bacteria 20507
107 Ga0209025_1005327 3300025294 Bacteria 10560
108 Ga0209025_1006549 3300025294 Bacteria 8988
109 Ga0209025_1018693 3300025294 Bacteria 3906
110 Ga0209564_1000744 3300025295 Bacteria 46190
111 Ga0209564_1001293 3300025295 Bacteria 27231
112 Ga0209564_1002126 3300025295 Bacteria 16803
113 Ga0209564_1005100 3300025295 Bacteria 7643
114 Ga0209564_1005866 3300025295 Bacteria 6822
115 Ga0209758_1000005 3300025297 Bacteria 1368918
116 Ga0209758_1001041 3300025297 Bacteria 36343
117 Ga0209758_1001120 3300025297 Bacteria 34521
118 Ga0209758_1001390 3300025297 Bacteria 28773
119 Ga0209758_1001942 3300025297 Bacteria 22415
120 Ga0209758_1003052 3300025297 Bacteria 15937
121 Ga0209758_1008778 3300025297 Bacteria 6442
122 Ga0209758_1016942 3300025297 Bacteria 3666
123 Ga0209050_1000018 3300025298 Bacteria 723263
124 Ga0209256_1001409 3300025299 Bacteria 24991
125 Ga0209256_1001713 3300025299 Bacteria 21052
126 Ga0209256_1008235 3300025299 Bacteria 4884
127 Ga0207426_1000013 3300025302 Bacteria 721897
128 Ga0207426_1000063 3300025302 Bacteria 358920
129 Ga0207426_1000172 3300025302 Bacteria 163690
130 Ga0207426_1000394 3300025302 Bacteria 74327
131 Ga0209051_1009459 3300025303 Bacteria 5020
132 Ga0209051_1015256 3300025303 Bacteria 3544
133 Ga0209257_1006594 3300025304 Bacteria 7400
134 Ga0207705_10007380 3300025909 Bacteria 8082
135 Ga0207684_10036526 3300025910 Bacteria 4169
136 Ga0207695_10095045 3300025913 Bacteria 2986
137 Ga0207660_10000002 3300025917 Bacteria 883566
138 Ga0207657_10003235 3300025919 Bacteria 17432
139 Ga0207652_10000843 3300025921 Bacteria 29231
140 Ga0207646_10042617 3300025922 Bacteria 4077
141 Ga0207681_10000189 3300025923 Bacteria 50344
142 Ga0207694_10000020 3300025924 Bacteria 310240
143 Ga0207691_10019795 3300025940 Bacteria 6366
144 Ga0207667_10000651 3300025949 Bacteria 45008
145 Ga0207703_10000784 3300026035 Bacteria 31249
146 Ga0207702_10037332 3300026078 Bacteria 4066
147 Ga0209971_1000163 3300027682 Bacteria 19906
148 Ga0209966_1000119 3300027695 Bacteria 35102
149 Ga0209998_10000150 3300027717 Bacteria 26296
150 Ga0209998_10000462 3300027717 Bacteria 11263
151 Ga0207428_10004626 3300027907 Bacteria 13044
152 Ga0268266_10001061 3300028379 Bacteria 34439
153 Ga0268266_10009365 3300028379 Bacteria 8632
154 Ga0268265_10001223 3300028380 Bacteria 22296
155 Ga0265319_1000692 3300028563 Bacteria 21966
156 Ga0307515_10010883 3300028794 Bacteria 17355
157 Ga0265324_10010567 3300029957 Bacteria 3550
158 Ga0316177_1116371 3300030731 Bacteria 11600
159 Ga0316183_1077402 3300030742 Bacteria 37229
160 Ga0316181_1008420 3300030744 Bacteria 25358
161 Ga0265320_10012510 3300031240 Bacteria 4934
162 Ga0265316_10006407 3300031344 Bacteria 11246
163 Ga0265316_10030615 3300031344 Bacteria 4408
164 Ga0307513_10007602 3300031456 Bacteria 14009
165 Ga0307408_100003162 3300031548 Bacteria 11357
166 Ga0307508_10000126 3300031616 Bacteria 91143
167 Ga0265314_10022024 3300031711 Bacteria 4887
168 Ga0307412_10000033 3300031911 Bacteria 206649
169 Ga0395899_0000800 3300037312 Bacteria 30817
170 Ga0395899_0006935 3300037312 Bacteria 8776
171 Ga0395898_0023273 3300037466 Bacteria 6260
172 Ga0436364_0065271 3300037853 Bacteria 6959
173 Ga0436364_1374803 3300037853 Bacteria 9047
174 Ga0436365_0075141 3300039437 Bacteria 4694
175 Ga0436365_0694621 3300039437 Bacteria 8923
176 Ga0439465_0002860 3300041413 Bacteria 5654
177 Ga0451833_0218490 3300041491 Bacteria 4631
178 Ga0451835_0629619 3300041492 Bacteria 3078
179 Ga0451837_0222008 3300041494 Bacteria 3183
180 Ga0451839_1104868 3300041496 Bacteria 3295
181 Ga0451841_0540973 3300041498 Bacteria 3711
182 Ga0451845_0352778 3300041501 Bacteria 3859
183 Ga0451847_0716182 3300041503 Bacteria 3650
184 Ga0451849_0537386 3300041505 Bacteria 3686
185 Ga0451851_0211095 3300041507 Bacteria 7196
186 Ga0451843_0286942 3300041509 Bacteria 3518
187 Ga0451855_0233675 3300041511 Bacteria 4271
188 Ga0466966_0000360 3300044684 Bacteria 29519
189 Ga0466967_0059809 3300045976 Bacteria 3374
190 Ga0495629_0000008 3300046459 Bacteria 352138
191 Ga0495638_0000097 3300046460 Bacteria 141017
192 Ga0495638_0000533 3300046460 Bacteria 44252
193 Ga0495650_0000017 3300046471 Bacteria 542552
194 Ga0495632_0007757 3300046519 Bacteria 6691
195 Ga0495654_0000012 3300046530 Bacteria 328997
196 Ga0495668_0002353 3300046616 Bacteria 15723
197 Ga0495625_0010384 3300046660 Bacteria 7710
198 Ga0495625_0020099 3300046660 Bacteria 5161
199 Ga0495660_0020610 3300046810 Bacteria 3779
200 Ga0495672_0001237 3300047320 Bacteria 25663
201 Ga0495672_0013654 3300047320 Bacteria 5591
202 Ga0495686_0000035 3300047472 Bacteria 314930
203 Ga0495686_0001424 3300047472 Bacteria 26170
204 Ga0495686_0002931 3300047472 Bacteria 15294
205 Ga0495686_0004492 3300047472 Bacteria 11466
206 Ga0495686_0004618 3300047472 Bacteria 11208
207 Ga0495686_0006384 3300047472 Bacteria 9040
208 Ga0496100_0029707 3300048903 Bacteria 3384
209 Ga0496104_0000076 3300048907 Bacteria 102010
210 Ga0496104_0062505 3300048907 Bacteria 3530
211 Ga0496105_0015362 3300048908 Bacteria 6100
212 Ga0496106_0001043 3300048909 Bacteria 20359
213 Ga0496106_0024895 3300048909 Bacteria 4451
214 Ga0496107_0000095 3300048910 Bacteria 42594
215 Ga0496110_0009932 3300048913 Bacteria 7716
216 Ga0496111_0027524 3300048914 Bacteria 4022
217 Ga0496112_0000001 3300048915 Bacteria 1346031
218 Ga0496113_0043631 3300048916 Bacteria 3319
219 Ga0496114_0014460 3300048917 Bacteria 6339
220 Ga0496116_0000135 3300048919 Bacteria 153165
221 Ga0496118_0001637 3300048921 Bacteria 33031
222 Ga0496118_0003276 3300048921 Bacteria 20611
223 Ga0496119_0007016 3300048922 Bacteria 10259
224 Ga0496121_0001883 3300048924 Bacteria 33669
225 Ga0496122_0025499 3300048925 Bacteria 5132
226 Ga0496123_0020529 3300048926 Bacteria 5164
227 Ga0496123_0024884 3300048926 Bacteria 4532
228 Ga0496124_0015459 3300048927 Bacteria 7314
229 Ga0496125_0004078 3300048928 Bacteria 17091
230 Ga0496126_0000129 3300048929 Bacteria 174059
231 Ga0496126_0056209 3300048929 Bacteria 3558
232 Ga0495678_015546 3300049459 Bacteria 3499
233 Ga0501033_0031529 3300049570 Bacteria 3983
234 Ga0501039_0003582 3300049575 Bacteria 11644
235 Ga0501040_0000271 3300049576 Bacteria 30212
236 Ga0501040_0006331 3300049576 Bacteria 7686
237 Ga0501041_0002402 3300049577 Bacteria 10604
238 Ga0501042_0002958 3300049578 Bacteria 10560
239 Ga0501042_0032579 3300049578 Bacteria 3691
240 Ga0501046_0005426 3300049580 Bacteria 11394
241 Ga0501048_0037604 3300049582 Bacteria 3476
242 Ga0501071_0000244 3300049587 Bacteria 25138
243 Ga0501072_0002064 3300049588 Bacteria 14938
244 Ga0501072_0012416 3300049588 Bacteria 6508
245 Ga0501074_0001909 3300049590 Bacteria 14320
246 Ga0501074_0004922 3300049590 Bacteria 9573
247 Ga0501075_0001109 3300049591 Bacteria 17340
248 Ga0501077_0000251 3300049593 Bacteria 31915
249 Ga0501079_0002266 3300049741 Bacteria 13891
250 Ga0501080_0006204 3300049742 Bacteria 10730
251 Ga0501080_0018307 3300049742 Bacteria 6483
252 Ga0501081_0002794 3300049743 Bacteria 11076
253 Ga0501083_0008863 3300049744 Bacteria 7104
254 Ga0501045_0002373 3300049824 Bacteria 12787
255 nmdc:mga06z11_3077_c1 3300050494 Archaea 6422
256 nmdc:mga05p37_12898_c1 3300050507 Bacteria 9995
257 nmdc:mga05p37_44754_c1 3300050507 Bacteria 5445
258 nmdc:mga06r32_2868_c1 3300050510 Bacteria 15468
259 nmdc:mga08y16_4834_c1 3300050511 Bacteria 14058
260 nmdc:mga0n895_29036_c1 3300050512 Bacteria 5270
261 nmdc:mga0rr50_13816_c1 3300050513 Bacteria 5274
262 nmdc:mga0a205_7366_c1 3300050515 Bacteria 9965
263 Ga0500610_0000010 3300053079 Bacteria 101459
264 Ga0495619_0008216 3300053085 Bacteria 6601
265 Ga0500651_0000010 3300053093 Bacteria 253038
266 Ga0500651_0000669 3300053093 Bacteria 17059
267 Ga0500566_0012394 3300053094 Bacteria 5022
268 Ga0500641_0000426 3300053096 Bacteria 15484
269 Ga0500555_000002 3300053103 Bacteria 1314346
270 Ga0500556_0002856 3300053104 Bacteria 5268
271 Ga0500557_000321 3300053105 Bacteria 6350
272 Ga0500595_008253 3300053119 Bacteria 4264
273 Ga0500608_000182 3300053122 Bacteria 25762
274 Ga0500652_000031 3300053131 Bacteria 89798
275 Ga0500658_0006058 3300053134 Bacteria 4495
276 Ga0500568_0000240 3300053139 Bacteria 46686
277 Ga0500568_0000458 3300053139 Bacteria 30422
278 Ga0500616_0001378 3300053153 Bacteria 23524
279 Ga0500616_0016939 3300053153 Bacteria 4138
280 Ga0500622_0000478 3300053156 Bacteria 37607
281 Ga0500622_0015525 3300053156 Bacteria 4077
282 Ga0500627_0002513 3300053158 Bacteria 5459
283 Ga0500633_0001435 3300053160 Bacteria 4484
284 Ga0500645_003564 3300053730 Bacteria 6262
285 Ga0501084_0000224 3300054114 Bacteria 42957
286 Ga0501084_0003316 3300054114 Bacteria 13019
287 Ga0501082_0001274 3300060353 Bacteria 22120
288 Ga0530510_0001666 3300061734 Bacteria 15044

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053119 Ga0500595_008253 Ga0500595_008253_21_2174 668
2 iso_pu_bacteria 2838016132 2838020177 679
3 3300003790 Ga0055528_1002254 Ga0055528_10022544 684
4 3300049570 Ga0501033_0031529 Ga0501033_0031529_426_2930 731
5 3300049578 Ga0501042_0002958 Ga0501042_0002958_7950_10454 731
6 3300049587 Ga0501071_0000244 Ga0501071_0000244_5710_8214 731
7 3300049588 Ga0501072_0002064 Ga0501072_0002064_3913_6417 731
8 3300054114 Ga0501084_0000224 Ga0501084_0000224_22300_24804 731
9 3300049576 Ga0501040_0000271 Ga0501040_0000271_5171_7675 736
10 3300049590 Ga0501074_0001909 Ga0501074_0001909_9204_11708 736
11 3300049591 Ga0501075_0001109 Ga0501075_0001109_14750_17254 736
12 3300049593 Ga0501077_0000251 Ga0501077_0000251_21107_23611 736
13 3300061734 Ga0530510_0001666 Ga0530510_0001666_2513_5017 736
14 3300049582 Ga0501048_0037604 Ga0501048_0037604_1012_3465 737
15 3300053085 Ga0495619_0008216 Ga0495619_0008216_11_2509 738
16 3300039437 Ga0436365_0075141 Ga0436365_0075141_1001_3544 748
17 3300003187 JGI25151J46595_10001434 JGI25151J46595_1000143414 752
18 3300005262 Ga0065165_1011103 Ga0065165_10111032 752
19 3300025258 Ga0209129_1000016 Ga0209129_1000016292 752
20 3300025294 Ga0209025_1000126 Ga0209025_100012625 752
21 3300025297 Ga0209758_1016942 Ga0209758_10169422 752
22 3300025303 Ga0209051_1015256 Ga0209051_10152562 752
23 3300025294 Ga0209025_1018693 Ga0209025_10186932 754
24 3300005617 Ga0068859_100011422 Ga0068859_1000114223 758
25 3300006931 Ga0097620_100011422 Ga0097620_1000114223 758
26 3300025263 Ga0209565_1000049 Ga0209565_1000049164 760
27 3300025273 Ga0209673_1000721 Ga0209673_100072119 760
28 3300015690 Ga0183363_1007 Ga0183363_100738 762
29 3300009098 Ga0105245_10002421 Ga0105245_100024218 764
30 3300053104 Ga0500556_0002856 Ga0500556_0002856_2189_4855 764
31 3300053730 Ga0500645_003564 Ga0500645_003564_669_3335 764
32 3300003214 JGI25165J46597_1000071 JGI25165J46597_100007141 765
33 3300025261 Ga0209233_1000140 Ga0209233_1000140145 765
34 3300031616 Ga0307508_10000126 Ga0307508_1000012615 765
35 3300049578 Ga0501042_0032579 Ga0501042_0032579_1119_3656 765
36 3300049824 Ga0501045_0002373 Ga0501045_0002373_29_2566 765
37 3300054114 Ga0501084_0003316 Ga0501084_0003316_10413_12950 765
38 3300005842 Ga0068858_100000093 Ga0068858_10000009323 766
39 3300006852 Ga0075433_10004859 Ga0075433_100048598 766
40 3300026035 Ga0207703_10000784 Ga0207703_100007847 766
41 3300047472 Ga0495686_0004492 Ga0495686_0004492_4426_7239 766
42 3300050507 nmdc:mga05p37_12898_c1 nmdc:mga05p37_12898_c1_4889_7420 766
43 3300050512 nmdc:mga0n895_29036_c1 nmdc:mga0n895_29036_c1_1977_4508 766
44 3300050513 nmdc:mga0rr50_13816_c1 nmdc:mga0rr50_13816_c1_196_2727 766
45 3300025297 Ga0209758_1001390 Ga0209758_100139013 767
46 3300053096 Ga0500641_0000426 Ga0500641_0000426_11004_13655 767
47 3300005563 Ga0068855_100005719 Ga0068855_1000057195 769
48 3300025949 Ga0207667_10000651 Ga0207667_100006516 769
49 3300046460 Ga0495638_0000097 Ga0495638_0000097_127582_130065 770
50 3300053134 Ga0500658_0006058 Ga0500658_0006058_2002_4485 770
51 3300006038 Ga0075365_10000324 Ga0075365_1000032413 771
52 3300006844 Ga0075428_100032908 Ga0075428_1000329084 774
53 3300006880 Ga0075429_100031007 Ga0075429_1000310072 774
54 3300025909 Ga0207705_10007380 Ga0207705_100073802 775
55 3300047472 Ga0495686_0006384 Ga0495686_0006384_2086_4761 775
56 3300025297 Ga0209758_1003052 Ga0209758_100305216 776
57 3300046471 Ga0495650_0000017 Ga0495650_0000017_520963_523740 776
58 3300046519 Ga0495632_0007757 Ga0495632_0007757_3045_5837 776
59 3300046530 Ga0495654_0000012 Ga0495654_0000012_9776_12439 776
60 3300053158 Ga0500627_0002513 Ga0500627_0002513_375_3038 776
61 3300047472 Ga0495686_0000035 Ga0495686_0000035_256370_259114 778
62 3300005844 Ga0068862_100000804 Ga0068862_10000080411 779
63 3300028380 Ga0268265_10001223 Ga0268265_100012232 779
64 3300048907 Ga0496104_0000076 Ga0496104_0000076_25830_28559 779
65 iso_pu_bacteria 8005382845 8005387405 783
66 3300053153 Ga0500616_0016939 Ga0500616_0016939_1054_3741 784
67 3300047320 Ga0495672_0001237 Ga0495672_0001237_19976_22732 785
68 3300046660 Ga0495625_0020099 Ga0495625_0020099_1694_4345 786
69 iso_pu_bacteria 2643221568 2643853648 786
70 iso_pu_bacteria 2919166419 2919168077 786
71 iso_pu_bacteria 2978969890 2978970747 786
72 iso_pu_bacteria 2984587000 2984587856 786
73 3300049576 Ga0501040_0006331 Ga0501040_0006331_2610_5258 787
74 3300049580 Ga0501046_0005426 Ga0501046_0005426_8216_10864 787
75 3300049590 Ga0501074_0004922 Ga0501074_0004922_1842_4490 787
76 3300049741 Ga0501079_0002266 Ga0501079_0002266_10534_13182 787
77 3300049744 Ga0501083_0008863 Ga0501083_0008863_215_2863 787
78 3300053093 Ga0500651_0000010 Ga0500651_0000010_201725_204472 787
79 3300060353 Ga0501082_0001274 Ga0501082_0001274_8549_11197 787
80 iso_pu_bacteria 2842285085 2842286731 787
81 iso_pu_bacteria 2842402390 2842403716 787
82 iso_pu_bacteria 2842409023 2842410582 787
83 iso_pu_bacteria 2842415677 2842417228 787
84 3300003775 Ga0055524_1004808 Ga0055524_10048082 788
85 3300025273 Ga0209673_1000005 Ga0209673_1000005304 788
86 3300025292 Ga0209676_1008888 Ga0209676_10088882 788
87 3300025295 Ga0209564_1005866 Ga0209564_10058663 788
88 3300025299 Ga0209256_1001713 Ga0209256_100171315 788
89 iso_pu_bacteria 2510917030 2511197647 788
90 iso_pu_bacteria 2582581298 2585223657 788
91 iso_pu_bacteria 2585427528 2585539580 788
92 iso_pu_bacteria 2585427529 2585545747 788
93 iso_pu_bacteria 2585427593 2585837537 788
94 iso_pu_bacteria 2615840624 2616297012 788
95 iso_pu_bacteria 2718217997 2719663807 788
96 iso_pu_bacteria 2718218199 2720490226 788
97 iso_pu_bacteria 2718218232 2720611606 788
98 iso_pu_bacteria 2718218233 2720618455 788
99 iso_pu_bacteria 2718218235 2720629863 788
100 iso_pu_bacteria 2718218269 2720773558 788
101 iso_pu_bacteria 2721755556 2723025229 788
102 iso_pu_bacteria 2721755684 2723558814 788
103 iso_pu_bacteria 2721755685 2723565384 788
104 iso_pu_bacteria 2721755819 2724088165 788
105 iso_pu_bacteria 2721755822 2724102649 788
106 iso_pu_bacteria 2721755823 2724108545 788
107 iso_pu_bacteria 2728369352 2730106165 788
108 iso_pu_bacteria 2738541333 2739036969 788
109 iso_pu_bacteria 2791355256 2793295315 788
110 iso_pu_bacteria 2791355260 2793323334 788
111 iso_pu_bacteria 2791355261 2793326273 788
112 iso_pu_bacteria 2791355262 2793334334 788
113 iso_pu_bacteria 2802429634 2806055068 788
114 iso_pu_bacteria 2802429635 2806062030 788
115 iso_pu_bacteria 2802429636 2806067244 788
116 iso_pu_bacteria 2802429637 2806076565 788
117 iso_pu_bacteria 2838022645 2838025696 788
118 iso_pu_bacteria 2838048938 2838051607 788
119 iso_pu_bacteria 2838061910 2838064082 788
120 iso_pu_bacteria 2838068647 2838071003 788
121 iso_pu_bacteria 2842198810 2842202847 788
122 iso_pu_bacteria 2842205361 2842207060 788
123 iso_pu_bacteria 2842264693 2842268869 788
124 iso_pu_bacteria 2842278818 2842280247 788
125 iso_pu_bacteria 2842311132 2842312729 788
126 iso_pu_bacteria 2842422224 2842424618 788
127 iso_pu_bacteria 2842428310 2842432931 788
128 iso_pu_bacteria 2842434925 2842439236 788
129 iso_pu_bacteria 2842441272 2842445865 788
130 iso_pu_bacteria 2842447887 2842451954 788
131 iso_pu_bacteria 2842462802 2842467051 788
132 iso_pu_bacteria 2842469257 2842473921 788
133 iso_pu_bacteria 2919100787 2919101459 788
134 iso_pu_bacteria 2933599457 2933601802 788
135 iso_pu_bacteria 2996893221 2996893327 788
136 iso_pu_bacteria 8005282627 8005289117 788
137 iso_pu_bacteria 8005289223 8005291190 788
138 iso_pu_bacteria 8005301065 8005301444 788
139 iso_pu_bacteria 8005430974 8005432823 788
140 iso_pu_bacteria 8005497431 8005498553 788
141 iso_pu_bacteria 8005570704 8005576814 788
142 iso_pu_bacteria 8005619151 8005619745 788
143 iso_pu_bacteria 8005668836 8005669964 788
144 iso_pu_bacteria 8005688590 8005690160 788
145 iso_pu_bacteria 8018127388 8018133014 788
146 3300005339 Ga0070660_100008432 Ga0070660_1000084327 789
147 3300025919 Ga0207657_10003235 Ga0207657_1000323511 789
148 iso_pu_bacteria 2510917028 2511182160 789
149 iso_pu_bacteria 2513237088 2513597982 789
150 iso_pu_bacteria 2513237138 2513870021 789
151 iso_pu_bacteria 2513237144 2513913177 789
152 iso_pu_bacteria 2519899620 2520375582 789
153 iso_pu_bacteria 2582581294 2585202150 789
154 iso_pu_bacteria 2582581867 2585400788 789
155 iso_pu_bacteria 2585427590 2585822310 789
156 iso_pu_bacteria 2923556063 2923559158 789
157 iso_pu_bacteria 2996887358 2996888963 789
158 iso_pu_bacteria 8005258706 8005260380 789
159 iso_pu_bacteria 8005321885 8005323490 789
160 3300006847 Ga0075431_100004849 Ga0075431_1000048493 790
161 3300013102 Ga0157371_10009237 Ga0157371_100092377 790
162 3300048919 Ga0496116_0000135 Ga0496116_0000135_75899_78394 790
163 3300048929 Ga0496126_0000129 Ga0496126_0000129_21685_24180 790
164 3300050510 nmdc:mga06r32_2868_c1 nmdc:mga06r32_2868_c1_9440_12100 790
165 iso_pu_bacteria 2513237146 2513927683 790
166 iso_pu_bacteria 2599185170 2599414639 790
167 iso_pu_bacteria 2838035591 2838037001 790
168 iso_pu_bacteria 3005445848 3005446075 790
169 3300013307 Ga0157372_10000212 Ga0157372_1000021248 791
170 3300041413 Ga0439465_0002860 Ga0439465_0002860_2849_5371 791
171 3300048925 Ga0496122_0025499 Ga0496122_0025499_896_3403 791
172 3300048926 Ga0496123_0020529 Ga0496123_0020529_1790_4297 791
173 3300048927 Ga0496124_0015459 Ga0496124_0015459_507_3014 791
174 3300053156 Ga0500622_0015525 Ga0500622_0015525_547_3054 791
175 3300002739 JGI25158J39367_1000045 JGI25158J39367_10000456 792
176 3300002773 JGI25152J39213_1001089 JGI25152J39213_100108916 792
177 3300002987 JGI25159J45721_1003666 JGI25159J45721_10036662 792
178 3300003187 JGI25151J46595_10000504 JGI25151J46595_1000050424 792
179 3300003215 JGI25153J46596_10010418 JGI25153J46596_100104182 792
180 3300003320 rootH2_10034842 rootH2_1003484210 792
181 3300003354 JGI25160J50197_1001055 JGI25160J50197_10010554 792
182 3300003374 JGI25161J50226_1000122 JGI25161J50226_100012269 792
183 3300003771 Ga0055526_1000629 Ga0055526_100062918 792
184 3300003771 Ga0055526_1002359 Ga0055526_100235915 792
185 3300003775 Ga0055524_1002589 Ga0055524_10025896 792
186 3300004625 Ga0055543_1000059 Ga0055543_100005914 792
187 3300004625 Ga0055543_1000277 Ga0055543_100027718 792
188 3300006178 Ga0075367_10018504 Ga0075367_100185042 792
189 3300009093 Ga0105240_10104948 Ga0105240_101049482 792
190 3300025208 Ga0209436_100006 Ga0209436_10000629 792
191 3300025245 Ga0207425_1003352 Ga0207425_10033523 792
192 3300025258 Ga0209129_1000401 Ga0209129_100040110 792
193 3300025258 Ga0209129_1000761 Ga0209129_10007619 792
194 3300025273 Ga0209673_1001112 Ga0209673_100111221 792
195 3300025273 Ga0209673_1003785 Ga0209673_10037858 792
196 3300025273 Ga0209673_1004023 Ga0209673_10040232 792
197 3300025284 Ga0209130_1000002 Ga0209130_1000002165 792
198 3300025294 Ga0209025_1000574 Ga0209025_100057429 792
199 3300025295 Ga0209564_1001293 Ga0209564_100129317 792
200 3300025295 Ga0209564_1002126 Ga0209564_100212614 792
201 3300025297 Ga0209758_1001041 Ga0209758_100104119 792
202 3300025297 Ga0209758_1001120 Ga0209758_10011204 792
203 3300025299 Ga0209256_1008235 Ga0209256_10082352 792
204 3300025302 Ga0207426_1000013 Ga0207426_1000013165 792
205 3300025302 Ga0207426_1000063 Ga0207426_1000063331 792
206 3300025302 Ga0207426_1000172 Ga0207426_10001723 792
207 3300025303 Ga0209051_1009459 Ga0209051_10094595 792
208 3300025304 Ga0209257_1006594 Ga0209257_10065944 792
209 3300025913 Ga0207695_10095045 Ga0207695_100950452 792
210 3300028794 Ga0307515_10010883 Ga0307515_1001088315 792
211 3300031456 Ga0307513_10007602 Ga0307513_100076029 792
212 3300041491 Ga0451833_0218490 Ga0451833_0218490_2008_4518 792
213 3300041492 Ga0451835_0629619 Ga0451835_0629619_183_2693 792
214 3300041494 Ga0451837_0222008 Ga0451837_0222008_252_2762 792
215 3300041496 Ga0451839_1104868 Ga0451839_1104868_286_2796 792
216 3300041498 Ga0451841_0540973 Ga0451841_0540973_598_3108 792
217 3300041501 Ga0451845_0352778 Ga0451845_0352778_500_3010 792
218 3300041503 Ga0451847_0716182 Ga0451847_0716182_868_3378 792
219 3300041505 Ga0451849_0537386 Ga0451849_0537386_578_3088 792
220 3300041507 Ga0451851_0211095 Ga0451851_0211095_4180_6690 792
221 3300041509 Ga0451843_0286942 Ga0451843_0286942_720_3230 792
222 3300041511 Ga0451855_0233675 Ga0451855_0233675_578_3088 792
223 3300048909 Ga0496106_0001043 Ga0496106_0001043_6740_9262 792
224 3300048921 Ga0496118_0003276 Ga0496118_0003276_3703_6225 792
225 3300048928 Ga0496125_0004078 Ga0496125_0004078_2540_5062 792
226 3300050494 nmdc:mga06z11_3077_c1 nmdc:mga06z11_3077_c1_199_2676 792
227 3300053139 Ga0500568_0000458 Ga0500568_0000458_7107_9629 792
228 3300053156 Ga0500622_0000478 Ga0500622_0000478_6890_9415 792
229 3300053160 Ga0500633_0001435 Ga0500633_0001435_1680_4202 792
230 3300003215 JGI25153J46596_10000086 JGI25153J46596_1000008681 793
231 3300025294 Ga0209025_1005327 Ga0209025_10053275 793
232 3300025297 Ga0209758_1000005 Ga0209758_1000005855 793
233 3300049742 Ga0501080_0018307 Ga0501080_0018307_193_2709 793
234 3300002773 JGI25152J39213_1001053 JGI25152J39213_100105310 794
235 3300003354 JGI25160J50197_1005400 JGI25160J50197_10054003 794
236 3300003771 Ga0055526_1001860 Ga0055526_10018608 794
237 3300003790 Ga0055528_1000530 Ga0055528_100053020 794
238 3300003790 Ga0055528_1005511 Ga0055528_10055114 794
239 3300005347 Ga0070668_100012984 Ga0070668_1000129845 794
240 3300005445 Ga0070708_100001573 Ga0070708_10000157314 794
241 3300009553 Ga0105249_10029950 Ga0105249_100299502 794
242 3300025258 Ga0209129_1000613 Ga0209129_100061319 794
243 3300025258 Ga0209129_1005379 Ga0209129_10053792 794
244 3300025273 Ga0209673_1000709 Ga0209673_100070939 794
245 3300025273 Ga0209673_1002738 Ga0209673_10027382 794
246 3300025294 Ga0209025_1002330 Ga0209025_10023302 794
247 3300025294 Ga0209025_1006549 Ga0209025_10065493 794
248 3300025295 Ga0209564_1000744 Ga0209564_100074437 794
249 3300025295 Ga0209564_1005100 Ga0209564_10051004 794
250 3300025297 Ga0209758_1001942 Ga0209758_100194237 794
251 3300025297 Ga0209758_1008778 Ga0209758_10087782 794
252 3300025299 Ga0209256_1001409 Ga0209256_10014099 794
253 3300025302 Ga0207426_1000394 Ga0207426_10003944 794
254 3300046460 Ga0495638_0000533 Ga0495638_0000533_10432_12954 794
255 3300046616 Ga0495668_0002353 Ga0495668_0002353_5520_8042 794
256 3300047320 Ga0495672_0013654 Ga0495672_0013654_3028_5550 794
257 3300048903 Ga0496100_0029707 Ga0496100_0029707_569_3085 794
258 3300048907 Ga0496104_0062505 Ga0496104_0062505_793_3309 794
259 3300048908 Ga0496105_0015362 Ga0496105_0015362_119_2635 794
260 3300048909 Ga0496106_0024895 Ga0496106_0024895_474_2990 794
261 3300048913 Ga0496110_0009932 Ga0496110_0009932_4230_6746 794
262 3300048914 Ga0496111_0027524 Ga0496111_0027524_107_2623 794
263 3300048916 Ga0496113_0043631 Ga0496113_0043631_483_2999 794
264 3300048917 Ga0496114_0014460 Ga0496114_0014460_3395_5911 794
265 3300048921 Ga0496118_0001637 Ga0496118_0001637_14025_16541 794
266 3300048922 Ga0496119_0007016 Ga0496119_0007016_4312_6828 794
267 3300048926 Ga0496123_0024884 Ga0496123_0024884_417_2933 794
268 3300048929 Ga0496126_0056209 Ga0496126_0056209_501_3017 794
269 3300049459 Ga0495678_015546 Ga0495678_015546_786_3308 794
270 3300053105 Ga0500557_000321 Ga0500557_000321_874_3396 794
271 3300053139 Ga0500568_0000240 Ga0500568_0000240_12870_15392 794
272 3300053153 Ga0500616_0001378 Ga0500616_0001378_5206_7728 794
273 3300006852 Ga0075433_10026187 Ga0075433_100261873 795
274 3300050515 nmdc:mga0a205_7366_c1 nmdc:mga0a205_7366_c1_1321_3945 795
275 3300005545 Ga0070695_100009500 Ga0070695_1000095004 796
276 3300005563 Ga0068855_100009110 Ga0068855_1000091101 796
277 3300009551 Ga0105238_10000003 Ga0105238_10000003212 796
278 3300025924 Ga0207694_10000020 Ga0207694_10000020158 796
279 3300027682 Ga0209971_1000163 Ga0209971_10001638 796
280 3300027695 Ga0209966_1000119 Ga0209966_10001195 796
281 3300027717 Ga0209998_10000150 Ga0209998_100001507 796
282 3300031344 Ga0265316_10006407 Ga0265316_100064076 796
283 3300005548 Ga0070665_100037154 Ga0070665_1000371542 797
284 3300025922 Ga0207646_10042617 Ga0207646_100426172 797
285 3300028379 Ga0268266_10009365 Ga0268266_100093654 797
286 3300026078 Ga0207702_10037332 Ga0207702_100373322 798
287 3300028563 Ga0265319_1000692 Ga0265319_10006922 798
288 3300029957 Ga0265324_10010567 Ga0265324_100105672 798
289 3300031240 Ga0265320_10012510 Ga0265320_100125101 798
290 3300031344 Ga0265316_10030615 Ga0265316_100306152 798
291 3300031711 Ga0265314_10022024 Ga0265314_100220242 798
292 iso_pu_bacteria 2643221552 2643780162 798
293 iso_pu_bacteria 2643221584 2643928640 798
294 3300009094 Ga0111539_10008802 Ga0111539_1000880212 799
295 3300009147 Ga0114129_10076582 Ga0114129_100765824 799
296 3300027907 Ga0207428_10004626 Ga0207428_1000462612 799
297 3300037853 Ga0436364_1374803 Ga0436364_1374803_301_3021 799
298 3300047472 Ga0495686_0002931 Ga0495686_0002931_10150_12777 799
299 3300050511 nmdc:mga08y16_4834_c1 nmdc:mga08y16_4834_c1_1169_3829 799
300 3300005355 Ga0070671_100013543 Ga0070671_1000135433 800
301 3300053079 Ga0500610_0000010 Ga0500610_0000010_37447_40020 800
302 3300053103 Ga0500555_000002 Ga0500555_000002_359024_361597 800
303 3300053131 Ga0500652_000031 Ga0500652_000031_64514_67084 800
304 iso_pu_bacteria 2818991435 2819536742 800
305 iso_pu_bacteria 2818991454 2819645903 800
306 3300025940 Ga0207691_10019795 Ga0207691_100197952 801
307 3300048910 Ga0496107_0000095 Ga0496107_0000095_32938_35712 801
308 3300048924 Ga0496121_0001883 Ga0496121_0001883_3198_5972 801
309 3300005548 Ga0070665_100001859 Ga0070665_1000018593 802
310 3300009551 Ga0105238_10010547 Ga0105238_100105473 802
311 3300028379 Ga0268266_10001061 Ga0268266_1000106125 802
312 3300005530 Ga0070679_100000831 Ga0070679_10000083112 803
313 3300025921 Ga0207652_10000843 Ga0207652_100008439 803
314 3300005467 Ga0070706_100049589 Ga0070706_1000495892 804
315 3300039437 Ga0436365_0694621 Ga0436365_0694621_1976_4681 804
316 3300046459 Ga0495629_0000008 Ga0495629_0000008_67194_69851 804
317 3300053094 Ga0500566_0012394 Ga0500566_0012394_2327_4984 804
318 3300037853 Ga0436364_0065271 Ga0436364_0065271_2958_5675 806
319 3300046660 Ga0495625_0010384 Ga0495625_0010384_2745_5501 806
320 3300049575 Ga0501039_0003582 Ga0501039_0003582_3561_6317 806
321 3300049577 Ga0501041_0002402 Ga0501041_0002402_6902_9658 806
322 3300049588 Ga0501072_0012416 Ga0501072_0012416_3081_5837 806
323 3300049742 Ga0501080_0006204 Ga0501080_0006204_2542_5298 806
324 3300049743 Ga0501081_0002794 Ga0501081_0002794_5151_7907 806
325 3300027717 Ga0209998_10000462 Ga0209998_100004623 807
326 3300005468 Ga0070707_100021726 Ga0070707_1000217262 808
327 3300009147 Ga0114129_10009999 Ga0114129_100099991 809
328 3300005471 Ga0070698_100040714 Ga0070698_1000407142 814
329 3300025910 Ga0207684_10036526 Ga0207684_100365262 814
330 3300037312 Ga0395899_0000800 Ga0395899_0000800_11862_14465 814
331 3300045976 Ga0466967_0059809 Ga0466967_0059809_219_2945 814
332 iso_pu_bacteria 2919509842 2919512321 815
333 3300005353 Ga0070669_100000205 Ga0070669_10000020525 816
334 3300005445 Ga0070708_100001963 Ga0070708_1000019637 816
335 3300005445 Ga0070708_100009853 Ga0070708_1000098536 816
336 3300005467 Ga0070706_100003395 Ga0070706_1000033959 816
337 3300025923 Ga0207681_10000189 Ga0207681_1000018920 816
338 3300048915 Ga0496112_0000001 Ga0496112_0000001_46142_48946 816
339 3300005445 Ga0070708_100024991 Ga0070708_1000249914 817
340 3300009147 Ga0114129_10030143 Ga0114129_100301433 817
341 3300050507 nmdc:mga05p37_44754_c1 nmdc:mga05p37_44754_c1_308_3070 817
342 3300005336 Ga0070680_100000002 Ga0070680_100000002160 818
343 3300025917 Ga0207660_10000002 Ga0207660_10000002489 818
344 3300037312 Ga0395899_0006935 Ga0395899_0006935_4169_7060 818
345 3300037466 Ga0395898_0023273 Ga0395898_0023273_1495_4386 818
346 3300030731 Ga0316177_1116371 Ga0316177_11163714 819
347 3300005468 Ga0070707_100015688 Ga0070707_1000156883 821
348 3300003323 rootH1_10287881 rootH1_1028788112 822
349 3300005444 Ga0070694_100004932 Ga0070694_1000049324 822
350 3300005545 Ga0070695_100004466 Ga0070695_1000044663 822
351 3300025261 Ga0209233_1000703 Ga0209233_100070313 822
352 3300044684 Ga0466966_0000360 Ga0466966_0000360_20379_23006 822
353 3300047472 Ga0495686_0001424 Ga0495686_0001424_16689_19310 822
354 3300010375 Ga0105239_10001290 Ga0105239_1000129031 824
355 3300025272 Ga0209455_1004983 Ga0209455_10049832 824
356 3300031548 Ga0307408_100003162 Ga0307408_1000031626 824
357 3300013296 Ga0157374_10000758 Ga0157374_1000075812 827
358 iso_pu_bacteria 2775506987 2776613481 827
359 3300030742 Ga0316183_1077402 Ga0316183_107740221 830
360 3300030744 Ga0316181_1008420 Ga0316181_100842016 830
361 3300005289 Ga0065704_10076542 Ga0065704_100765423 831
362 3300013102 Ga0157371_10000293 Ga0157371_100002934 831
363 3300003781 Ga0055536_1000009 Ga0055536_1000009172 835
364 3300003791 Ga0055530_10000316 Ga0055530_1000031610 835
365 3300025292 Ga0209676_1000001 Ga0209676_10000011178 835
366 3300025298 Ga0209050_1000018 Ga0209050_1000018406 835
367 3300015262 Ga0182007_10007279 Ga0182007_100072792 841
368 3300047472 Ga0495686_0004618 Ga0495686_0004618_7469_10162 848
369 iso_pu_bacteria 2852627209 2852627436 848
370 3300013104 Ga0157370_10002502 Ga0157370_1000250216 851
371 3300053093 Ga0500651_0000669 Ga0500651_0000669_5333_7927 851
372 3300053122 Ga0500608_000182 Ga0500608_000182_1231_3831 853
373 3300046810 Ga0495660_0020610 Ga0495660_0020610_354_3083 861
374 2162886007 SwRhRL2b_contig_2244174 SwRhRL2b_0569.00003010 864
375 2162886007 SwRhRL2b_contig_902721 SwRhRL2b_0033.00004870 864
376 3300005289 Ga0065704_10000199 Ga0065704_10000199265 864
377 3300013100 Ga0157373_10000015 Ga0157373_1000001543 864
378 3300031911 Ga0307412_10000033 Ga0307412_10000033150 864

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21686

LigD_Prim-Pol

LigD, primase-polymerase domain

652

942

0.95

PF13298

LigD_N

DNA polymerase Ligase (LigD)

57

176

0.94

PF01068

DNA_ligase_A_M

ATP dependent DNA ligase domain

250

441

0.9

PF04679

DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

460

562

0.89

Feature Viewer

pLDDT pTM Quality
84.5 0.42 Low
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Predicted Structure (AlphaFold2)

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