F427887

General Info

Members Datasets Scaffolds Average Seq Length
377 246 297 718

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8002869464|8002870335
Length 761
Sequence ASTLQVALPVPLPRVFDYRPPADLVAGEDAIGRRVRVPFGPRELCGVVAGVGAPHVEPKPVDAPELRHALALLDEAPLFHGELLESLRWLARYTHAPLGEVFATALPAALRHGEPLPDTHAWAWTLTPEGSREVERLRKGTRPRRLAELLQAGPRDEDALDLLLEDWRSAARALAKRGLAERVAVPASRIAPEPQAGPELNAEQQAAVETIVAADGFAPVLLEGVTGSGKTEVYLRAIADCLARGKQALVLVPEIGLTPQTLARFRARLGVPVHALHSGLNDNARARTWAAAWRGEARVIVGTRSAVFTPLPDAGLIVVDEEHDASYKQQDGIRYHARDFALVRGKALGVPVLLGSATPSLESLHNAQSGRYTHLRLSKRAGEAKPPAVRVVDVRKRPLQAGLSPETLQAIDHALHVGGQVLVFKNRRGYAPALLCHDCGWSAHCKRCDATMTVHAGGRRLQCHHCGHRQPAPLACPDCGGLALQPQGIGTERLEEMLAEKFAAFPVVRVDRGTTQRKDAMERHLDALGDAPGILVGTQILAKGHDLPHLTLVVVVGVDEGLFSADFRAGEKLAQQLIQVAGRAGRAEKAGEVWLQTHHPEHALLQTLIHGGYPAFAANELAMREAAGFPPFAHLALLRAEAQHVEAAQAFLLAAKAQIPLGPPFAKGEAIAASAVRNATGISPPLKKGGPGGFVSEVELHGPMPAPMPRRAGFQRMQLLLSSPNRRTLHAALDAWVPALHELPEARKVRWSLDVDPVDLY

Samples

Sample ID Description Type Environment
1 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
2 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
3 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
4 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
5 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
6 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
7 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
8 2643221559 Lysobacter sp. Root559 Isolate Unclassified
9 2643221573 Lysobacter sp. Root604 Isolate Unclassified
10 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
11 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
12 2643221586 Lysobacter sp. Root667 Isolate Unclassified
13 2643221593 Lysobacter sp. Root690 Isolate Unclassified
14 2643221612 Lysobacter sp. Root76 Isolate Unclassified
15 2643221695 Lysobacter sp. Root494 Isolate Unclassified
16 2643221720 Lysobacter sp. Root916 Isolate Unclassified
17 2643221727 Lysobacter sp. Root96 Isolate Unclassified
18 2643221728 Lysobacter sp. Root983 Isolate Unclassified
19 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
20 2706794495 Dickeya zeae ZJU1202 Isolate Unclassified
21 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
22 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
23 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
24 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
25 2818991457 Xanthomonas translucens 569 Isolate Unclassified
26 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
27 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
28 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
29 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
30 2847085930 Erwinia persicina B64 Isolate Bulb
31 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
32 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
33 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
34 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
35 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
36 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
37 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
38 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
39 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
40 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
41 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
42 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
43 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
44 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
45 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
46 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
47 2904504865 Serratia marcescens 1822 Isolate Unclassified
48 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
49 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
50 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
51 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
52 2919150387 Rahnella aceris 1817 Isolate Unclassified
53 2919513703 Luteimonas sp. 3794 Isolate Unclassified
54 2919675420 Luteimonas terrae 4099 Isolate Unclassified
55 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
56 2927143783 Rahnella sp. 2050 Isolate Unclassified
57 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
58 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
59 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
60 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
61 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
62 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
63 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
64 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
65 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
66 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
67 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
68 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
69 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
70 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
71 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
72 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
73 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
74 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
75 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
76 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
77 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
78 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
79 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
80 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
81 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
82 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
83 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
84 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
85 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
86 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
87 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
88 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
89 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
90 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
91 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
92 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
93 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
94 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
95 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
96 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
97 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
98 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
99 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
100 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
101 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
102 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
103 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
104 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
105 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
106 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
107 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
108 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
109 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
110 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
111 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
112 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
113 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
114 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
115 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
116 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
117 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
118 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
119 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
120 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
121 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
122 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
123 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
124 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
125 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
126 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
127 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
128 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
133 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
134 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
135 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
137 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
138 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
139 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
140 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
141 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
142 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
143 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
144 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
145 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
146 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
147 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
148 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
149 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
166 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
167 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
168 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
169 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
170 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
171 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
172 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
173 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
174 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
175 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
176 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
177 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
178 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
179 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
180 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
181 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
182 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
183 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
184 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
185 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
186 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
187 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
188 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
189 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
190 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
191 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
192 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
193 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
194 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
195 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
196 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
197 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
198 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
199 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
200 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
201 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
202 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
203 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
204 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
205 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
206 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
207 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
208 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
209 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
210 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
211 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
212 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
213 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
214 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
215 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
216 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
217 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
218 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
219 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
220 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
221 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
222 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
223 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
224 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
225 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
226 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
227 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
228 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
229 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
230 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
231 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
232 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
233 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
234 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
235 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
236 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
237 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
238 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
239 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
240 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
241 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
242 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere
243 8055087960 Silvania hatchlandensis H19S6 Isolate Rhizosphere
244 8055092621 Silvania confinis H4N4 Isolate Rhizosphere
245 8055693939 Hafnia alvei A23BA Isolate Rhizosphere
246 8057304971 Scandinavium manionii H17S15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.78
Metatranscriptomes 0
Isolates 21.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0.27
Endosphere 23.61
Nodule 0.53
Rhizoplane 1.33
Rhizosphere 47.48
Stem 0
Stem Tuber 1.59
Unclassified 25.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000075 3300002737 Bacteria 120760
2 JGI25163J39215_1000213 3300002771 Bacteria 21872
3 JGI25164J39214_1000053 3300002772 Bacteria 120760
4 JGI25152J39213_1000039 3300002773 Bacteria 89573
5 JGI25151J46595_10000154 3300003187 Bacteria 89582
6 JGI25153J46596_10000120 3300003215 Bacteria 89582
7 Ga0055538_1000056 3300003751 Bacteria 120760
8 Ga0055539_1000084 3300003752 Bacteria 120760
9 Ga0055533_1000090 3300003756 Bacteria 120760
10 Ga0055525_1000116 3300003759 Bacteria 120760
11 Ga0055526_1000003 3300003771 Bacteria 413092
12 Ga0055526_1008454 3300003771 Bacteria 5132
13 Ga0055526_1013111 3300003771 Bacteria 3539
14 Ga0055537_1000055 3300003773 Bacteria 81951
15 Ga0055524_1000002 3300003775 Bacteria 459550
16 Ga0055524_1003824 3300003775 Bacteria 7149
17 Ga0055524_1016604 3300003775 Bacteria 2632
18 Ga0055536_1001204 3300003781 Bacteria 16059
19 Ga0055536_1001341 3300003781 Bacteria 15005
20 Ga0055536_1002816 3300003781 Bacteria 9594
21 Ga0055534_1000062 3300003784 Bacteria 81951
22 Ga0055534_1000129 3300003784 Bacteria 56688
23 Ga0055528_1000001 3300003790 Bacteria 402384
24 Ga0055528_1000407 3300003790 Bacteria 34812
25 Ga0055530_10001877 3300003791 Bacteria 14443
26 Ga0055530_10003483 3300003791 Bacteria 8922
27 Ga0055531_10001471 3300003794 Bacteria 17334
28 Ga0055531_10001935 3300003794 Bacteria 14477
29 Ga0055531_10003718 3300003794 Bacteria 9592
30 Ga0055531_10005781 3300003794 Bacteria 7161
31 Ga0055531_10006588 3300003794 Bacteria 6554
32 Ga0055531_10007372 3300003794 Bacteria 6023
33 Ga0055531_10009096 3300003794 Bacteria 5122
34 Ga0055531_10010646 3300003794 Bacteria 4544
35 Ga0055541_1000058 3300003841 Bacteria 120760
36 Ga0058692_1000004 3300003856 Bacteria 431119
37 Ga0058692_1000078 3300003856 Bacteria 70873
38 Ga0065704_10000082 3300005289 Bacteria 39544
39 Ga0065704_10071307 3300005289 Bacteria 11839
40 Ga0065704_10071481 3300005289 Bacteria 10967
41 Ga0070670_100003988 3300005331 Bacteria 12320
42 Ga0070668_100002558 3300005347 Bacteria 13371
43 Ga0070674_100033467 3300005356 Bacteria 3422
44 Ga0070678_100013258 3300005456 Bacteria 5160
45 Ga0068867_100003051 3300005459 Bacteria 11809
46 Ga0068853_100001763 3300005539 Bacteria 15896
47 Ga0068853_100006471 3300005539 Bacteria 9311
48 Ga0068855_100017388 3300005563 Bacteria 8652
49 Ga0068863_100024004 3300005841 Bacteria 5820
50 Ga0068863_100034230 3300005841 Bacteria 4839
51 Ga0075364_10001127 3300006051 Bacteria 14261
52 Ga0070716_100003564 3300006173 Bacteria 7348
53 Ga0075436_100009064 3300006914 Bacteria 6808
54 Ga0079104_1002681 3300006946 Bacteria 9187
55 Ga0105251_10002653 3300009011 Bacteria 13781
56 Ga0105251_10013477 3300009011 Bacteria 4572
57 Ga0105244_10000145 3300009036 Bacteria 73760
58 Ga0105244_10000208 3300009036 Bacteria 60141
59 Ga0105244_10005581 3300009036 Bacteria 8324
60 Ga0105244_10025569 3300009036 Bacteria 3208
61 Ga0105250_10000127 3300009092 Bacteria 66039
62 Ga0105250_10001273 3300009092 Bacteria 13857
63 Ga0105243_10003551 3300009148 Bacteria 12590
64 Ga0105248_10012830 3300009177 Bacteria 9244
65 Ga0105237_10009956 3300009545 Bacteria 10142
66 Ga0105238_10000798 3300009551 Bacteria 32638
67 Ga0105249_10034404 3300009553 Bacteria 4593
68 Ga0105239_10004785 3300010375 Bacteria 16066
69 Ga0105239_10018808 3300010375 Bacteria 7631
70 Ga0105239_10030408 3300010375 Bacteria 5938
71 Ga0157371_10000509 3300013102 Bacteria 46826
72 Ga0157371_10000732 3300013102 Bacteria 38348
73 Ga0157371_10005413 3300013102 Bacteria 10779
74 Ga0157371_10014305 3300013102 Bacteria 5994
75 Ga0157370_10001310 3300013104 Bacteria 31043
76 Ga0157370_10007416 3300013104 Bacteria 11942
77 Ga0157369_10000653 3300013105 Bacteria 44847
78 Ga0157374_10035127 3300013296 Bacteria 4584
79 Ga0163162_10012481 3300013306 Bacteria 8300
80 Ga0157372_10007189 3300013307 Bacteria 11852
81 Ga0157375_10007134 3300013308 Bacteria 9764
82 Ga0157375_10071610 3300013308 Bacteria 3481
83 Ga0182008_10000278 3300014497 Bacteria 40186
84 Ga0157376_10020127 3300014969 Bacteria 5156
85 Ga0182006_1011896 3300015261 Bacteria 3812
86 Ga0182007_10000142 3300015262 Bacteria 47856
87 Ga0182005_1000949 3300015265 Bacteria 12655
88 Ga0183360_10003 3300015689 Bacteria 713221
89 Ga0209760_100150 3300025207 Bacteria 42742
90 Ga0209784_100088 3300025224 Bacteria 120858
91 Ga0209566_100107 3300025225 Bacteria 120858
92 Ga0209674_100129 3300025226 Bacteria 120858
93 Ga0209563_100123 3300025230 Bacteria 120858
94 Ga0207427_100102 3300025231 Bacteria 120812
95 Ga0209437_100198 3300025233 Bacteria 120812
96 Ga0207425_1000074 3300025245 Bacteria 108738
97 Ga0209677_100080 3300025253 Bacteria 120820
98 Ga0209129_1000150 3300025258 Bacteria 113886
99 Ga0209233_1003433 3300025261 Bacteria 5577
100 Ga0209565_1000002 3300025263 Bacteria 1423083
101 Ga0209565_1000050 3300025263 Bacteria 213856
102 Ga0209565_1001586 3300025263 Bacteria 9690
103 Ga0209673_1000002 3300025273 Bacteria 1423083
104 Ga0209673_1000199 3300025273 Bacteria 120904
105 Ga0209675_1000002 3300025291 Bacteria 1423083
106 Ga0209675_1000007 3300025291 Bacteria 683430
107 Ga0209676_1000018 3300025292 Bacteria 631385
108 Ga0209676_1000052 3300025292 Bacteria 371539
109 Ga0209676_1000168 3300025292 Bacteria 156042
110 Ga0209676_1001518 3300025292 Bacteria 21123
111 Ga0209676_1002566 3300025292 Bacteria 12552
112 Ga0209676_1003484 3300025292 Bacteria 9646
113 Ga0209676_1004107 3300025292 Bacteria 8308
114 Ga0209025_1000048 3300025294 Bacteria 335574
115 Ga0209025_1001986 3300025294 Bacteria 23456
116 Ga0209025_1004450 3300025294 Bacteria 12169
117 Ga0209564_1000004 3300025295 Bacteria 1424639
118 Ga0209564_1000061 3300025295 Bacteria 322795
119 Ga0209758_1000056 3300025297 Bacteria 335574
120 Ga0209050_1000382 3300025298 Bacteria 83595
121 Ga0209050_1000562 3300025298 Bacteria 60493
122 Ga0209050_1002784 3300025298 Bacteria 14007
123 Ga0209050_1007515 3300025298 Bacteria 6084
124 Ga0209256_1000004 3300025299 Bacteria 1424643
125 Ga0209256_1001760 3300025299 Bacteria 20621
126 Ga0209256_1003632 3300025299 Bacteria 10571
127 Ga0209256_1006607 3300025299 Bacteria 6064
128 Ga0209051_1000974 3300025303 Bacteria 27895
129 Ga0209257_1000035 3300025304 Bacteria 631463
130 Ga0209257_1000261 3300025304 Bacteria 121357
131 Ga0209257_1001213 3300025304 Bacteria 32385
132 Ga0209257_1001575 3300025304 Bacteria 26306
133 Ga0209257_1001694 3300025304 Bacteria 24757
134 Ga0209257_1001772 3300025304 Bacteria 23893
135 Ga0209257_1002983 3300025304 Bacteria 15406
136 Ga0209257_1005015 3300025304 Bacteria 9646
137 Ga0209257_1006644 3300025304 Bacteria 7348
138 Ga0207696_1000134 3300025711 Bacteria 130099
139 Ga0207696_1000975 3300025711 Bacteria 17346
140 Ga0207655_1000298 3300025728 Bacteria 74953
141 Ga0207655_1000433 3300025728 Bacteria 56160
142 Ga0207655_1004656 3300025728 Bacteria 9622
143 Ga0207713_1000254 3300025735 Bacteria 66054
144 Ga0207705_10051943 3300025909 Bacteria 2950
145 Ga0207695_10004061 3300025913 Bacteria 20124
146 Ga0207671_10002580 3300025914 Bacteria 19137
147 Ga0207681_10032713 3300025923 Bacteria 3406
148 Ga0207694_10003563 3300025924 Bacteria 12357
149 Ga0207709_10007757 3300025935 Bacteria 5948
150 Ga0207669_10022348 3300025937 Bacteria 3359
151 Ga0207691_10001694 3300025940 Bacteria 21763
152 Ga0207691_10010042 3300025940 Bacteria 9083
153 Ga0207667_10020969 3300025949 Bacteria 7247
154 Ga0207667_10127684 3300025949 Bacteria 2619
155 Ga0207668_10038672 3300025972 Bacteria 3205
156 Ga0207668_10066785 3300025972 Bacteria 2550
157 Ga0207639_10000739 3300026041 Bacteria 22288
158 Ga0207639_10002356 3300026041 Bacteria 12694
159 Ga0207674_10008058 3300026116 Bacteria 12214
160 Ga0207683_10003968 3300026121 Bacteria 12835
161 Ga0209371_1000018 3300027312 Bacteria 614700
162 Ga0209371_1000025 3300027312 Bacteria 450640
163 Ga0209371_1000071 3300027312 Bacteria 200748
164 Ga0209371_1011643 3300027312 Bacteria 2597
165 Ga0268256_1000016 3300030500 Bacteria 614700
166 Ga0268256_1000027 3300030500 Bacteria 450640
167 Ga0268256_1000070 3300030500 Bacteria 189040
168 Ga0268256_1013675 3300030500 Bacteria 2444
169 Ga0307513_10000429 3300031456 Bacteria 60815
170 Ga0307513_10036734 3300031456 Bacteria 5460
171 Ga0307408_100007471 3300031548 Bacteria 7225
172 Ga0307508_10014185 3300031616 Bacteria 7268
173 Ga0316575_10017115 3300031665 Bacteria 2750
174 Ga0316579_10003965 3300031691 Bacteria 5838
175 Ga0316579_10005865 3300031691 Bacteria 4979
176 Ga0316576_10040855 3300031727 Bacteria 3335
177 Ga0316577_10001489 3300031733 Bacteria 11097
178 Ga0316577_10005668 3300031733 Bacteria 6552
179 Ga0307413_10002954 3300031824 Bacteria 7038
180 Ga0307406_10003665 3300031901 Bacteria 8364
181 Ga0307412_10002275 3300031911 Bacteria 10627
182 Ga0307414_10002449 3300032004 Bacteria 9712
183 Ga0316583_10002476 3300032133 Bacteria 6419
184 Ga0316583_10002802 3300032133 Bacteria 6094
185 Ga0316583_10011142 3300032133 Bacteria 3238
186 Ga0316585_10000401 3300032137 Bacteria 10007
187 Ga0316582_0005349 3300036647 Bacteria 6601
188 Ga0316584_0016045 3300036712 Bacteria 5365
189 Ga0395900_0166356 3300037418 Bacteria 2247
190 Ga0395905_0000889 3300037471 Bacteria 38998
191 Ga0400490_34331 3300038726 Bacteria 51219
192 Ga0237816_00373 3300039145 Bacteria 3807
193 Ga0439436_0003691 3300041404 Bacteria 4667
194 Ga0439438_000019 3300041405 Bacteria 117626
195 Ga0439447_000446 3300041407 Bacteria 15372
196 Ga0439465_0000052 3300041413 Bacteria 24801
197 Ga0439465_0000286 3300041413 Bacteria 14239
198 Ga0439432_000364 3300042006 Bacteria 16630
199 Ga0439432_002590 3300042006 Bacteria 6807
200 Ga0439449_0000350 3300042007 Bacteria 16878
201 Ga0439449_0009726 3300042007 Bacteria 3638
202 Ga0451576_0002199 3300045051 Bacteria 30065
203 Ga0495627_010928 3300046453 Bacteria 3278
204 Ga0495591_004968 3300046458 Bacteria 6296
205 Ga0495638_0000640 3300046460 Bacteria 38385
206 Ga0495638_0005193 3300046460 Bacteria 9735
207 Ga0495650_0000704 3300046471 Bacteria 42844
208 Ga0495606_0015755 3300046507 Bacteria 5805
209 Ga0495610_0001398 3300046512 Bacteria 21430
210 Ga0495616_0013411 3300046513 Bacteria 4622
211 Ga0495620_0014549 3300046515 Bacteria 3996
212 Ga0495631_0001634 3300046518 Bacteria 13379
213 Ga0495643_0000509 3300046522 Bacteria 48505
214 Ga0495663_0001638 3300046525 Bacteria 6998
215 Ga0495663_0002648 3300046525 Bacteria 5339
216 Ga0495621_0000318 3300046539 Bacteria 11661
217 Ga0495633_0002180 3300046558 Bacteria 14039
218 Ga0495633_0004912 3300046558 Bacteria 8351
219 Ga0495656_0002564 3300046615 Bacteria 6052
220 Ga0495656_0043222 3300046615 Bacteria 1891
221 Ga0495668_0000524 3300046616 Bacteria 47811
222 Ga0495649_0012986 3300046694 Bacteria 4820
223 Ga0495660_0000065 3300046810 Bacteria 120922
224 Ga0495636_0000527 3300047318 Bacteria 14105
225 Ga0495636_0013752 3300047318 Bacteria 3212
226 Ga0495672_0000355 3300047320 Bacteria 58647
227 Ga0495686_0015087 3300047472 Bacteria 5291
228 Ga0496104_0001652 3300048907 Bacteria 19253
229 Ga0496105_0017131 3300048908 Bacteria 5802
230 Ga0496114_0003792 3300048917 Bacteria 11652
231 Ga0496116_0000343 3300048919 Bacteria 74444
232 Ga0496116_0001148 3300048919 Bacteria 31389
233 Ga0496116_0018163 3300048919 Bacteria 5431
234 Ga0496116_0033093 3300048919 Bacteria 3673
235 Ga0496117_0001057 3300048920 Bacteria 42009
236 Ga0496117_0001116 3300048920 Bacteria 40487
237 Ga0496118_0000661 3300048921 Bacteria 56425
238 Ga0496118_0001940 3300048921 Bacteria 29299
239 Ga0496118_0002647 3300048921 Bacteria 23718
240 Ga0496118_0005000 3300048921 Bacteria 15322
241 Ga0496118_0014119 3300048921 Bacteria 7493
242 Ga0496118_0042163 3300048921 Bacteria 3603
243 Ga0496119_0000085 3300048922 Bacteria 137406
244 Ga0496119_0001372 3300048922 Bacteria 29711
245 Ga0496119_0007292 3300048922 Bacteria 10002
246 Ga0496119_0022438 3300048922 Bacteria 4519
247 Ga0496120_0000111 3300048923 Bacteria 137405
248 Ga0496120_0001351 3300048923 Bacteria 30172
249 Ga0496120_0001746 3300048923 Bacteria 24678
250 Ga0496121_0003939 3300048924 Bacteria 20555
251 Ga0496121_0009881 3300048924 Bacteria 10874
252 Ga0496121_0033352 3300048924 Bacteria 4660
253 Ga0496122_0000251 3300048925 Bacteria 120977
254 Ga0496122_0001492 3300048925 Bacteria 37428
255 Ga0496122_0005398 3300048925 Bacteria 15255
256 Ga0496122_0010322 3300048925 Bacteria 9658
257 Ga0496122_0010465 3300048925 Bacteria 9552
258 Ga0496122_0020544 3300048925 Bacteria 5958
259 Ga0496123_0000204 3300048926 Bacteria 120977
260 Ga0496123_0001263 3300048926 Bacteria 36324
261 Ga0496123_0003099 3300048926 Bacteria 19082
262 Ga0496123_0004862 3300048926 Bacteria 13830
263 Ga0496123_0006488 3300048926 Bacteria 11321
264 Ga0496123_0008162 3300048926 Bacteria 9658
265 Ga0496123_0008315 3300048926 Bacteria 9552
266 Ga0496123_0013738 3300048926 Bacteria 6769
267 Ga0496124_0000006 3300048927 Bacteria 904259
268 Ga0496124_0000193 3300048927 Bacteria 120829
269 Ga0496124_0003303 3300048927 Bacteria 19883
270 Ga0496124_0004254 3300048927 Bacteria 16852
271 Ga0496124_0005562 3300048927 Bacteria 14115
272 Ga0496124_0006695 3300048927 Bacteria 12473
273 Ga0496124_0009322 3300048927 Bacteria 10114
274 Ga0496124_0036282 3300048927 Bacteria 4302
275 Ga0496124_0037463 3300048927 Bacteria 4217
276 Ga0496124_0041210 3300048927 Bacteria 3987
277 Ga0496125_0001038 3300048928 Bacteria 42937
278 Ga0496125_0004566 3300048928 Bacteria 15872
279 Ga0496125_0020088 3300048928 Bacteria 6280
280 Ga0496125_0026491 3300048928 Bacteria 5280
281 Ga0496125_0073672 3300048928 Bacteria 2653
282 Ga0496126_0000488 3300048929 Bacteria 78186
283 Ga0496126_0000615 3300048929 Bacteria 67155
284 Ga0501290_000359 3300049513 Bacteria 7386
285 Ga0501034_0000862 3300049571 Bacteria 44918
286 Ga0501034_0010005 3300049571 Bacteria 9908
287 Ga0501038_0012833 3300049574 Bacteria 7649
288 Ga0501039_0083884 3300049575 Bacteria 2482
289 Ga0501043_0001654 3300049579 Bacteria 19370
290 Ga0501070_0015206 3300049586 Bacteria 6478
291 Ga0501070_0024119 3300049586 Bacteria 5101
292 Ga0501079_0091304 3300049741 Bacteria 2360
293 nmdc:mga00v17_20386_c1 3300050491 Bacteria 3798
294 nmdc:mga00v17_215_c1 3300050491 Bacteria 34819
295 nmdc:mga08x19_1889_c1 3300050514 Bacteria 12822
296 Ga0500651_0002136 3300053093 Bacteria 10305
297 Ga0500634_0001226 3300053161 Bacteria 9682

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0024119 Ga0501070_0024119_788_2560 558
2 3300046615 Ga0495656_0043222 Ga0495656_0043222_58_1872 571
3 3300037418 Ga0395900_0166356 Ga0395900_0166356_53_2089 614
4 3300047472 Ga0495686_0015087 Ga0495686_0015087_17_2092 624
5 3300003771 Ga0055526_1000003 Ga0055526_1000003244 625
6 3300003773 Ga0055537_1000055 Ga0055537_100005531 625
7 3300003775 Ga0055524_1000002 Ga0055524_1000002122 625
8 3300003784 Ga0055534_1000062 Ga0055534_100006231 625
9 3300003790 Ga0055528_1000001 Ga0055528_1000001122 625
10 3300025263 Ga0209565_1000002 Ga0209565_1000002458 625
11 3300025273 Ga0209673_1000002 Ga0209673_1000002458 625
12 3300025291 Ga0209675_1000002 Ga0209675_1000002458 625
13 3300025295 Ga0209564_1000004 Ga0209564_1000004459 625
14 3300025299 Ga0209256_1000004 Ga0209256_1000004459 625
15 3300038726 Ga0400490_34331 Ga0400490_34331_34120_36132 626
16 3300046616 Ga0495668_0000524 Ga0495668_0000524_15852_18095 628
17 3300048924 Ga0496121_0033352 Ga0496121_0033352_2212_4455 629
18 3300031691 Ga0316579_10003965 Ga0316579_100039658 630
19 3300032133 Ga0316583_10002476 Ga0316583_100024762 630
20 3300015689 Ga0183360_10003 Ga0183360_10003441 631
21 3300025263 Ga0209565_1001586 Ga0209565_10015865 631
22 3300046525 Ga0495663_0002648 Ga0495663_0002648_2223_4571 635
23 3300015261 Ga0182006_1011896 Ga0182006_10118962 640
24 3300025909 Ga0207705_10051943 Ga0207705_100519431 641
25 3300031824 Ga0307413_10002954 Ga0307413_100029543 643
26 3300049575 Ga0501039_0083884 Ga0501039_0083884_322_2376 644
27 3300049586 Ga0501070_0015206 Ga0501070_0015206_2173_4227 644
28 3300049741 Ga0501079_0091304 Ga0501079_0091304_204_2258 644
29 3300031548 Ga0307408_100007471 Ga0307408_1000074711 645
30 3300006914 Ga0075436_100009064 Ga0075436_1000090643 646
31 3300050514 nmdc:mga08x19_1889_c1 nmdc:mga08x19_1889_c1_5215_7377 646
32 3300042007 Ga0439449_0009726 Ga0439449_0009726_15_2210 647
33 3300010375 Ga0105239_10018808 Ga0105239_100188086 648
34 3300037471 Ga0395905_0000889 Ga0395905_0000889_25120_27294 652
35 3300031456 Ga0307513_10000429 Ga0307513_100004297 653
36 3300041413 Ga0439465_0000052 Ga0439465_0000052_3426_5744 653
37 3300048919 Ga0496116_0033093 Ga0496116_0033093_56_2278 657
38 3300048926 Ga0496123_0013738 Ga0496123_0013738_2098_4320 657
39 3300048927 Ga0496124_0009322 Ga0496124_0009322_1775_3997 657
40 3300048927 Ga0496124_0041210 Ga0496124_0041210_1221_3401 657
41 3300049571 Ga0501034_0000862 Ga0501034_0000862_4250_6475 657
42 3300053093 Ga0500651_0002136 Ga0500651_0002136_2395_4470 657
43 3300031901 Ga0307406_10003665 Ga0307406_100036652 658
44 3300003856 Ga0058692_1000078 Ga0058692_100007830 659
45 3300009036 Ga0105244_10025569 Ga0105244_100255692 659
46 3300013102 Ga0157371_10000509 Ga0157371_1000050929 659
47 3300015262 Ga0182007_10000142 Ga0182007_1000014215 659
48 3300015265 Ga0182005_1000949 Ga0182005_100094911 659
49 3300027312 Ga0209371_1000025 Ga0209371_1000025289 659
50 3300030500 Ga0268256_1000027 Ga0268256_1000027289 659
51 3300048908 Ga0496105_0017131 Ga0496105_0017131_2268_4490 659
52 3300048919 Ga0496116_0018163 Ga0496116_0018163_933_3155 659
53 3300048922 Ga0496119_0001372 Ga0496119_0001372_9847_12069 659
54 3300048923 Ga0496120_0001351 Ga0496120_0001351_9817_12039 659
55 3300048927 Ga0496124_0037463 Ga0496124_0037463_1667_3847 659
56 3300048928 Ga0496125_0004566 Ga0496125_0004566_4359_6581 659
57 3300048928 Ga0496125_0020088 Ga0496125_0020088_449_2671 659
58 3300048928 Ga0496125_0073672 Ga0496125_0073672_380_2602 659
59 3300048929 Ga0496126_0000615 Ga0496126_0000615_9716_11938 659
60 3300048924 Ga0496121_0009881 Ga0496121_0009881_4443_6632 660
61 3300013102 Ga0157371_10005413 Ga0157371_100054135 661
62 3300031456 Ga0307513_10036734 Ga0307513_100367343 661
63 3300049571 Ga0501034_0010005 Ga0501034_0010005_2135_4321 661
64 3300014969 Ga0157376_10020127 Ga0157376_100201272 662
65 3300048917 Ga0496114_0003792 Ga0496114_0003792_95_2281 662
66 3300048922 Ga0496119_0022438 Ga0496119_0022438_2288_4453 662
67 3300026116 Ga0207674_10008058 Ga0207674_100080586 663
68 3300046615 Ga0495656_0002564 Ga0495656_0002564_2425_4635 663
69 3300047318 Ga0495636_0013752 Ga0495636_0013752_128_2338 663
70 3300003794 Ga0055531_10001471 Ga0055531_100014717 664
71 3300025304 Ga0209257_1001575 Ga0209257_100157514 664
72 3300005289 Ga0065704_10071481 Ga0065704_100714819 665
73 3300006173 Ga0070716_100003564 Ga0070716_1000035646 665
74 3300025292 Ga0209676_1000168 Ga0209676_100016892 665
75 3300048928 Ga0496125_0026491 Ga0496125_0026491_1730_3907 666
76 3300031727 Ga0316576_10040855 Ga0316576_100408553 667
77 3300025292 Ga0209676_1002566 Ga0209676_10025663 668
78 3300025299 Ga0209256_1001760 Ga0209256_10017602 668
79 3300048925 Ga0496122_0001492 Ga0496122_0001492_10376_12571 668
80 3300048926 Ga0496123_0001263 Ga0496123_0001263_23646_25841 668
81 3300046512 Ga0495610_0001398 Ga0495610_0001398_8609_10840 669
82 3300046518 Ga0495631_0001634 Ga0495631_0001634_1320_3551 669
83 3300049574 Ga0501038_0012833 Ga0501038_0012833_430_2574 669
84 3300003781 Ga0055536_1001204 Ga0055536_100120416 670
85 3300003791 Ga0055530_10001877 Ga0055530_100018776 670
86 3300003794 Ga0055531_10001935 Ga0055531_1000193514 670
87 3300025292 Ga0209676_1000018 Ga0209676_1000018180 670
88 3300025298 Ga0209050_1000562 Ga0209050_100056256 670
89 3300025303 Ga0209051_1000974 Ga0209051_100097424 670
90 3300025304 Ga0209257_1000035 Ga0209257_1000035180 670
91 3300049579 Ga0501043_0001654 Ga0501043_0001654_14005_16164 670
92 3300050491 nmdc:mga00v17_20386_c1 nmdc:mga00v17_20386_c1_614_2848 670
93 iso_pu_bacteria 2842780639 2842782484 670
94 3300003791 Ga0055530_10003483 Ga0055530_100034835 671
95 3300009177 Ga0105248_10012830 Ga0105248_100128302 671
96 3300013296 Ga0157374_10035127 Ga0157374_100351274 671
97 3300025298 Ga0209050_1000382 Ga0209050_100038252 671
98 3300042006 Ga0439432_002590 Ga0439432_002590_1586_3817 671
99 3300046522 Ga0495643_0000509 Ga0495643_0000509_44987_47218 671
100 3300047320 Ga0495672_0000355 Ga0495672_0000355_45444_47675 671
101 3300048921 Ga0496118_0005000 Ga0496118_0005000_8277_10508 671
102 3300048927 Ga0496124_0003303 Ga0496124_0003303_4934_7186 671
103 3300005539 Ga0068853_100001763 Ga0068853_1000017639 672
104 3300005539 Ga0068853_100006471 Ga0068853_1000064715 672
105 3300005563 Ga0068855_100017388 Ga0068855_1000173884 672
106 3300005841 Ga0068863_100024004 Ga0068863_1000240045 672
107 3300010375 Ga0105239_10004785 Ga0105239_1000478512 672
108 3300025949 Ga0207667_10020969 Ga0207667_100209695 672
109 3300025949 Ga0207667_10127684 Ga0207667_101276841 672
110 3300026041 Ga0207639_10000739 Ga0207639_1000073912 672
111 3300026041 Ga0207639_10002356 Ga0207639_100023561 672
112 3300046460 Ga0495638_0000640 Ga0495638_0000640_31607_33838 672
113 iso_pu_bacteria 2747842428 2747950615 672
114 3300002773 JGI25152J39213_1000039 JGI25152J39213_100003979 673
115 3300003187 JGI25151J46595_10000154 JGI25151J46595_100001546 673
116 3300003215 JGI25153J46596_10000120 JGI25153J46596_100001206 673
117 3300025245 Ga0207425_1000074 Ga0207425_100007478 673
118 3300025258 Ga0209129_1000150 Ga0209129_100015078 673
119 3300025294 Ga0209025_1000048 Ga0209025_100004878 673
120 3300025297 Ga0209758_1000056 Ga0209758_100005678 673
121 3300005289 Ga0065704_10071307 Ga0065704_1007130711 674
122 3300005331 Ga0070670_100003988 Ga0070670_1000039884 674
123 3300005356 Ga0070674_100033467 Ga0070674_1000334672 674
124 3300009011 Ga0105251_10002653 Ga0105251_100026534 674
125 3300013308 Ga0157375_10071610 Ga0157375_100716103 674
126 3300025735 Ga0207713_1000254 Ga0207713_10002547 674
127 3300025923 Ga0207681_10032713 Ga0207681_100327131 674
128 3300025937 Ga0207669_10022348 Ga0207669_100223482 674
129 3300025940 Ga0207691_10010042 Ga0207691_1001004210 674
130 3300048926 Ga0496123_0003099 Ga0496123_0003099_6885_9074 674
131 iso_pu_bacteria 2895522137 2895524651 674
132 iso_pu_bacteria 2895525241 2895526235 674
133 3300003775 Ga0055524_1003824 Ga0055524_10038245 675
134 3300003775 Ga0055524_1016604 Ga0055524_10166041 675
135 3300003794 Ga0055531_10007372 Ga0055531_100073725 675
136 3300003794 Ga0055531_10009096 Ga0055531_100090962 675
137 3300003856 Ga0058692_1000004 Ga0058692_100000429 675
138 3300009148 Ga0105243_10003551 Ga0105243_100035516 675
139 3300013102 Ga0157371_10014305 Ga0157371_100143054 675
140 3300025292 Ga0209676_1004107 Ga0209676_10041075 675
141 3300025294 Ga0209025_1001986 Ga0209025_10019867 675
142 3300025298 Ga0209050_1002784 Ga0209050_10027843 675
143 3300025299 Ga0209256_1003632 Ga0209256_10036324 675
144 3300025299 Ga0209256_1006607 Ga0209256_10066074 675
145 3300025304 Ga0209257_1001213 Ga0209257_100121319 675
146 3300025304 Ga0209257_1001694 Ga0209257_10016946 675
147 3300025304 Ga0209257_1002983 Ga0209257_10029834 675
148 3300025304 Ga0209257_1006644 Ga0209257_10066442 675
149 3300025935 Ga0207709_10007757 Ga0207709_100077572 675
150 3300026121 Ga0207683_10003968 Ga0207683_100039683 675
151 3300027312 Ga0209371_1000018 Ga0209371_1000018363 675
152 3300030500 Ga0268256_1000016 Ga0268256_1000016363 675
153 3300031911 Ga0307412_10002275 Ga0307412_100022754 675
154 3300048919 Ga0496116_0001148 Ga0496116_0001148_18249_20438 675
155 3300048920 Ga0496117_0001116 Ga0496117_0001116_25895_28120 675
156 3300048921 Ga0496118_0002647 Ga0496118_0002647_13277_15502 675
157 3300048924 Ga0496121_0003939 Ga0496121_0003939_9788_12019 675
158 3300048925 Ga0496122_0010322 Ga0496122_0010322_5980_8211 675
159 3300048926 Ga0496123_0008162 Ga0496123_0008162_1448_3679 675
160 3300048927 Ga0496124_0004254 Ga0496124_0004254_7763_9994 675
161 3300048927 Ga0496124_0005562 Ga0496124_0005562_8152_10377 675
162 3300048927 Ga0496124_0006695 Ga0496124_0006695_3623_5806 675
163 3300049513 Ga0501290_000359 Ga0501290_000359_3227_5428 675
164 3300003781 Ga0055536_1002816 Ga0055536_10028167 676
165 3300003794 Ga0055531_10003718 Ga0055531_100037184 676
166 3300025292 Ga0209676_1000052 Ga0209676_1000052342 676
167 3300025292 Ga0209676_1003484 Ga0209676_10034847 676
168 3300025304 Ga0209257_1005015 Ga0209257_10050154 676
169 3300046539 Ga0495621_0000318 Ga0495621_0000318_448_2631 676
170 3300048927 Ga0496124_0000006 Ga0496124_0000006_459336_461516 676
171 3300003771 Ga0055526_1008454 Ga0055526_10084544 677
172 3300003784 Ga0055534_1000129 Ga0055534_10001298 677
173 3300003790 Ga0055528_1000407 Ga0055528_10004073 677
174 3300003794 Ga0055531_10006588 Ga0055531_100065882 677
175 3300006051 Ga0075364_10001127 Ga0075364_100011272 677
176 3300009553 Ga0105249_10034404 Ga0105249_100344042 677
177 3300025263 Ga0209565_1000050 Ga0209565_100005065 677
178 3300025273 Ga0209673_1000199 Ga0209673_100019996 677
179 3300025291 Ga0209675_1000007 Ga0209675_1000007391 677
180 3300025295 Ga0209564_1000061 Ga0209564_1000061164 677
181 3300047318 Ga0495636_0000527 Ga0495636_0000527_7237_9465 677
182 3300050491 nmdc:mga00v17_215_c1 nmdc:mga00v17_215_c1_10567_12777 677
183 3300046453 Ga0495627_010928 Ga0495627_010928_428_2611 678
184 3300046507 Ga0495606_0015755 Ga0495606_0015755_2632_4812 678
185 3300046513 Ga0495616_0013411 Ga0495616_0013411_893_3073 678
186 3300046558 Ga0495633_0002180 Ga0495633_0002180_2597_4780 678
187 3300053161 Ga0500634_0001226 Ga0500634_0001226_7073_9256 678
188 iso_pu_bacteria 2818991457 2819661513 678
189 iso_pu_bacteria 2852684882 2852687405 678
190 iso_pu_bacteria 2919130084 2919130784 678
191 iso_pu_bacteria 2929195423 2929196011 678
192 iso_pu_bacteria 8003014200 8003017797 678
193 iso_pu_bacteria 8021622325 8021626048 678
194 iso_pu_bacteria 8021626552 8021628758 678
195 iso_pu_bacteria 8021648035 8021648835 678
196 3300003794 Ga0055531_10010646 Ga0055531_100106462 679
197 3300025304 Ga0209257_1001772 Ga0209257_100177212 679
198 3300048925 Ga0496122_0005398 Ga0496122_0005398_5365_7563 679
199 3300048926 Ga0496123_0006488 Ga0496123_0006488_8743_10941 679
200 iso_pu_bacteria 2977247770 2977248150 679
201 3300003771 Ga0055526_1013111 Ga0055526_10131112 680
202 3300003781 Ga0055536_1001341 Ga0055536_10013419 680
203 3300003794 Ga0055531_10005781 Ga0055531_100057814 680
204 3300025292 Ga0209676_1001518 Ga0209676_100151815 680
205 3300025294 Ga0209025_1004450 Ga0209025_10044502 680
206 3300025298 Ga0209050_1007515 Ga0209050_10075154 680
207 3300025304 Ga0209257_1000261 Ga0209257_100026195 680
208 3300045051 Ga0451576_0002199 Ga0451576_0002199_1501_3693 680
209 iso_pu_bacteria 2576861471 2578456796 680
210 iso_pu_bacteria 2643221559 2643818097 680
211 iso_pu_bacteria 2643221573 2643880265 680
212 iso_pu_bacteria 2643221586 2643937761 680
213 iso_pu_bacteria 2643221612 2644078666 680
214 iso_pu_bacteria 2643221720 2644660839 680
215 iso_pu_bacteria 2643221727 2644693443 680
216 iso_pu_bacteria 2643221728 2644698921 680
217 iso_pu_bacteria 2765235840 2765580707 680
218 iso_pu_bacteria 2842757796 2842760717 680
219 iso_pu_bacteria 2852649853 2852651956 680
220 iso_pu_bacteria 2857442823 2857444344 680
221 iso_pu_bacteria 2919134579 2919137157 680
222 iso_pu_bacteria 2939589442 2939589997 680
223 iso_pu_bacteria 2941475908 2941478590 680
224 iso_pu_bacteria 2974307012 2974307403 680
225 iso_pu_bacteria 2987605356 2987609056 680
226 3300031616 Ga0307508_10014185 Ga0307508_100141855 681
227 iso_pu_bacteria 2643221579 2643906553 681
228 iso_pu_bacteria 2941489479 2941491174 681
229 3300013104 Ga0157370_10007416 Ga0157370_1000741611 682
230 3300014497 Ga0182008_10000278 Ga0182008_1000027815 682
231 3300031665 Ga0316575_10017115 Ga0316575_100171151 682
232 3300031733 Ga0316577_10005668 Ga0316577_100056683 682
233 3300032133 Ga0316583_10002802 Ga0316583_100028022 682
234 3300032137 Ga0316585_10000401 Ga0316585_100004013 682
235 3300036647 Ga0316582_0005349 Ga0316582_0005349_2135_4309 682
236 3300046525 Ga0495663_0001638 Ga0495663_0001638_3409_5604 682
237 3300046558 Ga0495633_0004912 Ga0495633_0004912_2517_4694 682
238 3300048920 Ga0496117_0001057 Ga0496117_0001057_28491_30722 682
239 3300048921 Ga0496118_0000661 Ga0496118_0000661_22958_25189 682
240 3300048921 Ga0496118_0014119 Ga0496118_0014119_2526_4757 682
241 3300048925 Ga0496122_0010465 Ga0496122_0010465_5874_8105 682
242 3300048926 Ga0496123_0008315 Ga0496123_0008315_1448_3679 682
243 3300048927 Ga0496124_0036282 Ga0496124_0036282_1306_3537 682
244 iso_pu_bacteria 2547132130 2547503715 682
245 iso_pu_bacteria 2643221581 2643913935 682
246 iso_pu_bacteria 2643221695 2644528054 682
247 iso_pu_bacteria 2816332141 2816518284 682
248 iso_pu_bacteria 2842391507 2842395044 682
249 iso_pu_bacteria 2874220319 2874223369 682
250 iso_pu_bacteria 2919089067 2919092441 682
251 iso_pu_bacteria 2919513703 2919515714 682
252 iso_pu_bacteria 2923516293 2923516401 682
253 iso_pu_bacteria 2928496128 2928499940 682
254 iso_pu_bacteria 2931380184 2931383211 682
255 iso_pu_bacteria 2937610967 2937614161 682
256 iso_pu_bacteria 2939622612 2939624378 682
257 iso_pu_bacteria 2939626828 2939629317 682
258 iso_pu_bacteria 2961047084 2961050133 682
259 iso_pu_bacteria 2961064222 2961064725 682
260 3300009545 Ga0105237_10009956 Ga0105237_100099562 683
261 3300009551 Ga0105238_10000798 Ga0105238_1000079812 683
262 3300010375 Ga0105239_10030408 Ga0105239_100304081 683
263 3300013105 Ga0157369_10000653 Ga0157369_100006538 683
264 3300025913 Ga0207695_10004061 Ga0207695_100040614 683
265 3300025914 Ga0207671_10002580 Ga0207671_100025803 683
266 3300025924 Ga0207694_10003563 Ga0207694_100035639 683
267 3300032004 Ga0307414_10002449 Ga0307414_100024494 683
268 3300041404 Ga0439436_0003691 Ga0439436_0003691_585_2765 683
269 3300041413 Ga0439465_0000286 Ga0439465_0000286_2294_4474 683
270 3300042007 Ga0439449_0000350 Ga0439449_0000350_10422_12602 683
271 3300046694 Ga0495649_0012986 Ga0495649_0012986_30_2129 683
272 iso_pu_bacteria 2747842501 2748017623 683
273 3300013308 Ga0157375_10007134 Ga0157375_100071347 684
274 iso_pu_bacteria 2524614729 2525557411 684
275 iso_pu_bacteria 2627854209 2630649002 684
276 iso_pu_bacteria 2919675420 2919678513 684
277 3300039145 Ga0237816_00373 Ga0237816_00373_667_2862 685
278 iso_pu_bacteria 2895498888 2895501935 685
279 iso_pu_bacteria 2895511927 2895517113 685
280 iso_pu_bacteria 2995948881 2995949275 685
281 iso_pu_bacteria 8002869464 8002870335 686
282 3300005347 Ga0070668_100002558 Ga0070668_1000025582 687
283 3300005456 Ga0070678_100013258 Ga0070678_1000132583 687
284 3300005459 Ga0068867_100003051 Ga0068867_1000030512 687
285 3300005841 Ga0068863_100034230 Ga0068863_1000342302 687
286 3300013306 Ga0163162_10012481 Ga0163162_100124817 687
287 3300013307 Ga0157372_10007189 Ga0157372_100071898 687
288 3300025940 Ga0207691_10001694 Ga0207691_100016941 687
289 3300025972 Ga0207668_10038672 Ga0207668_100386721 687
290 3300025972 Ga0207668_10066785 Ga0207668_100667852 687
291 3300027312 Ga0209371_1011643 Ga0209371_10116431 687
292 3300030500 Ga0268256_1013675 Ga0268256_10136751 687
293 iso_pu_bacteria 2643221593 2643973665 687
294 3300009092 Ga0105250_10000127 Ga0105250_1000012742 693
295 3300048925 Ga0496122_0020544 Ga0496122_0020544_2894_5020 693
296 3300048926 Ga0496123_0004862 Ga0496123_0004862_8246_10372 693
297 3300031691 Ga0316579_10005865 Ga0316579_100058654 695
298 3300032133 Ga0316583_10011142 Ga0316583_100111422 695
299 3300027312 Ga0209371_1000071 Ga0209371_1000071113 699
300 3300030500 Ga0268256_1000070 Ga0268256_1000070110 699
301 3300031733 Ga0316577_10001489 Ga0316577_100014895 699
302 3300036712 Ga0316584_0016045 Ga0316584_0016045_3058_5268 699
303 iso_pu_bacteria 2537561728 2538427098 712
304 iso_pu_bacteria 2585427591 2585830353 712
305 iso_pu_bacteria 2585427592 2585835105 712
306 iso_pu_bacteria 2667528173 2671111035 712
307 iso_pu_bacteria 2846540461 2846544775 712
308 iso_pu_bacteria 2847085930 2847089684 712
309 iso_pu_bacteria 2855195626 2855197946 712
310 iso_pu_bacteria 2858466076 2858468120 712
311 iso_pu_bacteria 2871272651 2871276586 712
312 iso_pu_bacteria 2871282230 2871284821 712
313 iso_pu_bacteria 2888373701 2888375901 712
314 iso_pu_bacteria 2900051742 2900055077 712
315 iso_pu_bacteria 2904474040 2904478916 712
316 iso_pu_bacteria 2904504865 2904509199 712
317 iso_pu_bacteria 2908669403 2908674312 712
318 iso_pu_bacteria 2919150387 2919154958 712
319 iso_pu_bacteria 2927143783 2927148608 712
320 iso_pu_bacteria 8055087960 8055089077 712
321 iso_pu_bacteria 8055092621 8055093362 712
322 iso_pu_bacteria 8055693939 8055694050 712
323 iso_pu_bacteria 8057304971 8057305298 712
324 3300002737 JGI25162J39368_1000075 JGI25162J39368_100007523 716
325 3300002771 JGI25163J39215_1000213 JGI25163J39215_10002136 716
326 3300002772 JGI25164J39214_1000053 JGI25164J39214_100005323 716
327 3300003751 Ga0055538_1000056 Ga0055538_100005623 716
328 3300003752 Ga0055539_1000084 Ga0055539_100008489 716
329 3300003756 Ga0055533_1000090 Ga0055533_100009023 716
330 3300003759 Ga0055525_1000116 Ga0055525_100011689 716
331 3300003841 Ga0055541_1000058 Ga0055541_100005889 716
332 3300005289 Ga0065704_10000082 Ga0065704_1000008213 716
333 3300006946 Ga0079104_1002681 Ga0079104_10026814 716
334 3300009011 Ga0105251_10013477 Ga0105251_100134771 716
335 3300009036 Ga0105244_10000145 Ga0105244_1000014519 716
336 3300009036 Ga0105244_10000208 Ga0105244_1000020819 716
337 3300009036 Ga0105244_10005581 Ga0105244_100055814 716
338 3300009092 Ga0105250_10001273 Ga0105250_100012732 716
339 3300013102 Ga0157371_10000732 Ga0157371_1000073221 716
340 3300013104 Ga0157370_10001310 Ga0157370_1000131024 716
341 3300025207 Ga0209760_100150 Ga0209760_10015016 716
342 3300025224 Ga0209784_100088 Ga0209784_10008822 716
343 3300025225 Ga0209566_100107 Ga0209566_10010722 716
344 3300025226 Ga0209674_100129 Ga0209674_10012922 716
345 3300025230 Ga0209563_100123 Ga0209563_10012322 716
346 3300025231 Ga0207427_100102 Ga0207427_10010222 716
347 3300025233 Ga0209437_100198 Ga0209437_10019822 716
348 3300025253 Ga0209677_100080 Ga0209677_10008022 716
349 3300025261 Ga0209233_1003433 Ga0209233_10034332 716
350 3300025711 Ga0207696_1000134 Ga0207696_100013420 716
351 3300025711 Ga0207696_1000975 Ga0207696_10009752 716
352 3300025728 Ga0207655_1000298 Ga0207655_100029821 716
353 3300025728 Ga0207655_1000433 Ga0207655_100043322 716
354 3300025728 Ga0207655_1004656 Ga0207655_10046565 716
355 3300041405 Ga0439438_000019 Ga0439438_000019_91800_93995 716
356 3300041407 Ga0439447_000446 Ga0439447_000446_4005_6200 716
357 3300042006 Ga0439432_000364 Ga0439432_000364_2100_4295 716
358 3300046458 Ga0495591_004968 Ga0495591_004968_1229_3427 716
359 3300046460 Ga0495638_0005193 Ga0495638_0005193_5022_7220 716
360 3300046471 Ga0495650_0000704 Ga0495650_0000704_14930_17125 716
361 3300046515 Ga0495620_0014549 Ga0495620_0014549_417_2657 716
362 3300046810 Ga0495660_0000065 Ga0495660_0000065_25836_28031 716
363 3300048907 Ga0496104_0001652 Ga0496104_0001652_7367_9562 716
364 3300048919 Ga0496116_0000343 Ga0496116_0000343_46529_48724 716
365 3300048921 Ga0496118_0001940 Ga0496118_0001940_25721_27916 716
366 3300048921 Ga0496118_0042163 Ga0496118_0042163_96_2291 716
367 3300048922 Ga0496119_0000085 Ga0496119_0000085_110653_112851 716
368 3300048922 Ga0496119_0007292 Ga0496119_0007292_938_3133 716
369 3300048923 Ga0496120_0000111 Ga0496120_0000111_110652_112850 716
370 3300048923 Ga0496120_0001746 Ga0496120_0001746_7698_9893 716
371 3300048925 Ga0496122_0000251 Ga0496122_0000251_25721_27916 716
372 3300048926 Ga0496123_0000204 Ga0496123_0000204_25721_27916 716
373 3300048927 Ga0496124_0000193 Ga0496124_0000193_92913_95108 716
374 3300048928 Ga0496125_0001038 Ga0496125_0001038_25722_27917 716
375 3300048929 Ga0496126_0000488 Ga0496126_0000488_25722_27917 716
376 iso_pu_bacteria 2706794495 2707100843 716
377 iso_pu_bacteria 2854601825 2854604237 716

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18319

PriA_CRR

PriA DNA helicase Cys-rich region (CRR) domain

445

471

0.99

PF17764

PriA_3primeBD

3'DNA-binding domain (3'BD)

5

107

0.96

PF18074

PriA_C

Primosomal protein N C-terminal domain

669

757

0.9

PF00270

DEAD

DEAD/DEAH box helicase

201

367

0.85

PF00271

Helicase_C

Helicase conserved C-terminal domain

489

588

0.81

PF04851

ResIII

Type III restriction enzyme, res subunit

197

361

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dcr-assembly1.cif.gz_A e. coli pria helicase winged helix domain deletion protein 0.9123 1 715
4nl8-assembly1.cif.gz_A pria helicase bound to ssb c-terminal tail peptide 0.9112 1 716
6dcr-assembly1.cif.gz_A e. coli pria helicase winged helix domain deletion protein 0.9109 1 715
4nl8-assembly1.cif.gz_A pria helicase bound to ssb c-terminal tail peptide 0.9096 1 716
4nl8-assembly2.cif.gz_B pria helicase bound to ssb c-terminal tail peptide 0.9081 3 716
ID Description Score Start End Superfamily
af_P17888_114_183_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9922 113 181 1.10.10.10
4nl4H01 Alpha Beta;3-Layer(aba) Sandwich;GIY-YIG endonuclease;PriA, 3(prime) DNA-binding domain 0.9849 3 110 3.40.1440.60
4nl4H03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9708 183 378 3.40.50.300
4nl4H03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9659 183 378 3.40.50.300
af_P17888_114_183_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9644 113 181 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A4Z0KBE1-F1-model_v4 Primosomal protein N 0.9932 1 110 GO:0003677
GO:0005524
GO:0006268
GO:0006270
GO:0006302
GO:0006310
GO:0016787
GO:0043138
AF-A0A5E6NEM2-F1-model_v4 Helicase PriA essential for oriC/DnaA-independent DNA replication 0.9795 225 370 GO:0003676
GO:0005524
GO:0006268
GO:0006270
GO:0006302
GO:0006310
GO:0016787
GO:0043138
AF-A0A3B8Z331-F1-model_v4 Primosomal protein N 0.9522 180 355 GO:0003676
GO:0005524
GO:0006268
GO:0006270
GO:0006302
GO:0006310
GO:0016787
GO:0043138
AF-A0A8A7QYD7-F1-model_v4 deleted 0.9487 1 107
AF-A0A5E6NEM2-F1-model_v4 Helicase PriA essential for oriC/DnaA-independent DNA replication 0.9476 225 370 GO:0003676
GO:0005524
GO:0006268
GO:0006270
GO:0006302
GO:0006310
GO:0016787
GO:0043138

Feature Viewer

pLDDT pTM Quality
85.71 0.85 High
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Predicted Structure (AlphaFold2)

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