F427264

General Info

Members Datasets Scaffolds Average Seq Length
376 178 749 197

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100005884|Ga0070671_1000058845
Length 226
Sequence MPSFTEFEMHVYKLPGYNYLYSLDNDQMADRNDIISQYLRNFAPLNDKDISDSQPFWKARKISKGDFFNMQSMVCNDLGLIVKGIFRIYFHDPDTKEDKNIFFFSENQFVVSFRSFVSRNPCWYFIEAMEDSEIFFISYQDLNSLYETHPNWGKFGRLLAELFFSVAQTRTEEFIFFSHEQRYIRLLEEHPDIVERIPAYHISSYLGITNPSLSRIRKRIERKKAE

Samples

Sample ID Description Type Environment
1 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
8 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
9 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
10 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
11 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
18 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
19 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
20 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
21 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
22 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
25 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
26 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
103 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
115 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
126 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
127 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
134 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
139 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
140 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
141 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
145 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
146 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
147 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
148 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
149 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
150 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
151 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
152 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
153 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
154 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
155 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
156 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
157 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
158 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
159 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
160 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
161 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
162 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
166 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
167 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
168 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
169 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
170 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
171 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
172 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
173 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
174 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
175 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
176 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
177 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
178 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.07
Metatranscriptomes 0
Isolates 2.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.28
Nodule 0
Rhizoplane 0.53
Rhizosphere 68.62
Stem 0
Stem Tuber 0
Unclassified 11.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070671_100005884 3300005355 Bacteria 9773
2 SwRhRL2b_contig_2848454 2162886007 Bacteria 16274
3 JGI24740J21852_10002462 3300001979 Bacteria 8385
4 JGI24739J22299_10000998 3300001989 Bacteria 10529
5 JGI24739J22299_10002811 3300001989 Bacteria 6678
6 JGI24737J22298_10000148 3300001990 Bacteria 21941
7 JGI24737J22298_10114006 3300001990 Bacteria 799
8 JGI24735J21928_10000020 3300002067 Bacteria 108706
9 JGI24744J21845_10004078 3300002077 Bacteria 3014
10 JGI25162J39368_1000056 3300002737 Bacteria 146755
11 JGI25162J39368_1003597 3300002737 Unclassified 4314
12 JGI25154J39366_1000008 3300002738 Bacteria 315375
13 JGI25164J39214_1002775 3300002772 Unclassified 2481
14 JGI25165J46597_1001274 3300003214 Bacteria 14736
15 JGI25165J46597_1001451 3300003214 Bacteria 12487
16 JGI25153J46596_10022943 3300003215 Bacteria 2287
17 rootH1_10058160 3300003316 Bacteria 2122
18 rootH1_10126330 3300003316 Bacteria 3261
19 rootH1_10162993 3300003316 Bacteria 2125
20 rootH2_10001530 3300003320 Bacteria 103971
21 rootH2_10202333 3300003320 Bacteria 1606
22 rootL2_10076045 3300003322 Bacteria 4977
23 rootL2_10105116 3300003322 Bacteria 2792
24 rootL2_10240688 3300003322 Unclassified 2323
25 rootH1_10008921 3300003323 Bacteria 20459
26 rootH1_10025500 3300003323 Bacteria 11759
27 rootH1_10028162 3300003323 Bacteria 9421
28 rootH1_10031547 3300003323 Bacteria 6323
29 rootH1_10072417 3300003323 Bacteria 1448
30 rootH1_10118308 3300003323 Unclassified 1585
31 rootH1_10131497 3300003316 Bacteria 1172
32 rootH1_10131497 3300003323 Bacteria 2941
33 rootH1_10153747 3300003323 Bacteria 5564
34 rootH1_10213198 3300003323 Bacteria 3080
35 rootH1_10317944 3300003323 Unclassified 1683
36 JGI25160J50197_1005022 3300003354 Bacteria 5595
37 JGI25160J50197_1007512 3300003354 Bacteria 4256
38 Ga0055526_1010976 3300003771 Bacteria 4142
39 Ga0055526_1025963 3300003771 Bacteria 1864
40 Ga0055536_1008939 3300003781 Bacteria 4225
41 Ga0055528_1000179 3300003790 Bacteria 53605
42 Ga0055530_10004552 3300003791 Bacteria 7083
43 Ga0055530_10015127 3300003791 Unclassified 2539
44 Ga0055531_10000167 3300003794 Bacteria 74090
45 Ga0065165_1000078 3300005262 Bacteria 162412
46 Ga0065165_1000280 3300005262 Bacteria 87088
47 Ga0065165_1055859 3300005262 Unclassified 1100
48 Ga0065714_10002551 3300005288 Bacteria 47503
49 Ga0065714_10068759 3300005288 Bacteria 4561
50 Ga0065704_10000219 3300005289 Bacteria 83241
51 Ga0070676_10002644 3300005328 Bacteria 9227
52 Ga0068868_100061196 3300005338 Bacteria 2982
53 Ga0070673_100007295 3300005364 Bacteria 7279
54 Ga0070673_100983049 3300005364 Bacteria 785
55 Ga0070659_100072738 3300005366 Bacteria 2736
56 Ga0070659_100769340 3300005366 Unclassified 836
57 Ga0070678_100011291 3300005456 Bacteria 5503
58 Ga0070662_100001095 3300005457 Bacteria 16503
59 Ga0068867_100004580 3300005459 Bacteria 9723
60 Ga0068853_100005944 3300005539 Bacteria 9639
61 Ga0068853_100071449 3300005539 Bacteria 3022
62 Ga0068853_100359366 3300005539 Bacteria 1356
63 Ga0070672_100313416 3300005543 Bacteria 1332
64 Ga0070665_100000012 3300005548 Bacteria 508937
65 Ga0070665_101293355 3300005548 Bacteria 739
66 Ga0068855_100020578 3300005563 Bacteria 7913
67 Ga0068855_100077639 3300005563 Bacteria 3853
68 Ga0068855_100080195 3300005563 Unclassified 3785
69 Ga0068857_100030948 3300005577 Bacteria 4729
70 Ga0068857_100680564 3300005577 Bacteria 976
71 Ga0068854_100059679 3300005578 Bacteria 2757
72 Ga0068854_100251140 3300005578 Bacteria 1412
73 Ga0068854_100365914 3300005578 Bacteria 1184
74 Ga0068856_100028882 3300005614 Bacteria 5419
75 Ga0068856_101034792 3300005614 Bacteria 839
76 Ga0068852_100259196 3300005616 Unclassified 1669
77 Ga0068852_101302025 3300005616 Bacteria 748
78 Ga0068852_101532253 3300005616 Unclassified 689
79 Ga0075366_10000490 3300006195 Bacteria 18314
80 Ga0075366_10006342 3300006195 Bacteria 6476
81 Ga0097621_100000738 3300006237 Bacteria 22914
82 Ga0068871_100000248 3300006358 Bacteria 37581
83 Ga0068871_100137971 3300006358 Unclassified 2072
84 Ga0068871_100244508 3300006358 Bacteria 1561
85 Ga0068871_100384402 3300006358 Bacteria 1247
86 Ga0105240_10000242 3300009093 Bacteria 108001
87 Ga0105240_10000723 3300009093 Bacteria 60353
88 Ga0105240_10008278 3300009093 Bacteria 14885
89 Ga0105240_10042805 3300009093 Bacteria 5769
90 Ga0105240_10045357 3300009093 Bacteria 5577
91 Ga0105240_10133582 3300009093 Unclassified 2973
92 Ga0105240_10307864 3300009093 Unclassified 1810
93 Ga0105240_10368426 3300009093 Bacteria 1625
94 Ga0105240_10497348 3300009093 Bacteria 1356
95 Ga0105240_10672911 3300009093 Bacteria 1132
96 Ga0105241_10001503 3300009174 Bacteria 17890
97 Ga0105241_10003686 3300009174 Bacteria 11382
98 Ga0105241_10006704 3300009174 Bacteria 8474
99 Ga0105241_10053163 3300009174 Unclassified 3096
100 Ga0105241_10121937 3300009174 Bacteria 2100
101 Ga0105241_10315767 3300009174 Bacteria 1346
102 Ga0105241_10460277 3300009174 Unclassified 1127
103 Ga0105237_10000963 3300009545 Bacteria 38740
104 Ga0105237_10051675 3300009545 Bacteria 4128
105 Ga0105237_10083531 3300009545 Bacteria 3185
106 Ga0105237_10239368 3300009545 Unclassified 1816
107 Ga0105238_10026567 3300009551 Bacteria 5903
108 Ga0105238_10057399 3300009551 Plasmid 3903
109 Ga0105238_10289063 3300009551 Unclassified 1621
110 Ga0105239_10000008 3300010375 Bacteria 376925
111 Ga0105239_10000013 3300010375 Bacteria 327371
112 Ga0105239_10000355 3300010375 Bacteria 67024
113 Ga0105239_10007983 3300010375 Bacteria 12086
114 Ga0105239_10036715 3300010375 Bacteria 5377
115 Ga0105239_10055274 3300010375 Bacteria 4354
116 Ga0105239_10086694 3300010375 Bacteria 3451
117 Ga0105239_10090683 3300010375 Bacteria 3372
118 Ga0105239_10142828 3300010375 Bacteria 2669
119 Ga0105239_10164884 3300010375 Bacteria 2477
120 Ga0105239_10229680 3300010375 Bacteria 2082
121 Ga0105239_10326509 3300010375 Unclassified 1731
122 Ga0105239_10407311 3300010375 Bacteria 1539
123 Ga0105246_10062189 3300011119 Bacteria 2600
124 Ga0157373_10000097 3300013100 Bacteria 71713
125 Ga0157373_10005535 3300013100 Bacteria 9471
126 Ga0157373_10020590 3300013100 Bacteria 4792
127 Ga0157373_10031076 3300013100 Bacteria 3843
128 Ga0157371_10000708 3300013102 Bacteria 39139
129 Ga0157371_10019766 3300013102 Bacteria 4962
130 Ga0157371_10021538 3300013102 Bacteria 4731
131 Ga0157371_10034303 3300013102 Unclassified 3640
132 Ga0157370_10003065 3300013104 Bacteria 19819
133 Ga0157370_10048780 3300013104 Bacteria 4056
134 Ga0157370_10124383 3300013104 Bacteria 2408
135 Ga0157370_10467872 3300013104 Bacteria 1159
136 Ga0157369_10033692 3300013105 Bacteria 5627
137 Ga0157369_10067633 3300013105 Bacteria 3840
138 Ga0157369_10343320 3300013105 Bacteria 1551
139 Ga0157369_10676012 3300013105 Bacteria 1064
140 Ga0157369_10939769 3300013105 Bacteria 886
141 Ga0157374_10000029 3300013296 Bacteria 211547
142 Ga0157374_10041848 3300013296 Bacteria 4224
143 Ga0157374_10799002 3300013296 Bacteria 959
144 Ga0157374_10900169 3300013296 Bacteria 902
145 Ga0157378_10046351 3300013297 Bacteria 3864
146 Ga0157378_10203076 3300013297 Bacteria 1875
147 Ga0163162_10000366 3300013306 Bacteria 40923
148 Ga0163162_10003374 3300013306 Bacteria 15280
149 Ga0163162_10334044 3300013306 Unclassified 1648
150 Ga0157372_10001279 3300013307 Bacteria 27221
151 Ga0157372_10019033 3300013307 Bacteria 7391
152 Ga0157372_10130786 3300013307 Bacteria 2888
153 Ga0157372_10256002 3300013307 Bacteria 2032
154 Ga0157375_10007276 3300013308 Bacteria 9687
155 Ga0157375_10026140 3300013308 Bacteria 5436
156 Ga0157375_10354056 3300013308 Bacteria 1634
157 Ga0157377_10022679 3300014745 Bacteria 3319
158 Ga0157376_10012023 3300014969 Bacteria 6407
159 Ga0157376_10106515 3300014969 Bacteria 2460
160 Ga0163161_10166127 3300017792 Bacteria 1685
161 Ga0163161_10771383 3300017792 Bacteria 806
162 Ga0207427_100482 3300025231 Bacteria 21562
163 Ga0209437_100124 3300025233 Bacteria 199789
164 Ga0209437_100170 3300025233 Bacteria 142489
165 Ga0209646_1000045 3300025246 Bacteria 333765
166 Ga0209026_1000075 3300025250 Bacteria 202874
167 Ga0209129_1010879 3300025258 Bacteria 2223
168 Ga0209233_1000266 3300025261 Bacteria 76176
169 Ga0209455_1005623 3300025272 Bacteria 3837
170 Ga0209673_1000014 3300025273 Bacteria 537082
171 Ga0209673_1000018 3300025273 Bacteria 458281
172 Ga0209676_1000616 3300025292 Bacteria 52007
173 Ga0209564_1002610 3300025295 Bacteria 13780
174 Ga0209564_1003474 3300025295 Bacteria 10744
175 Ga0209758_1002178 3300025297 Bacteria 20557
176 Ga0209758_1003892 3300025297 Bacteria 13058
177 Ga0209758_1006266 3300025297 Bacteria 8658
178 Ga0209050_1000452 3300025298 Bacteria 73748
179 Ga0209050_1000481 3300025298 Bacteria 70155
180 Ga0209050_1062646 3300025298 Unclassified 870
181 Ga0207426_1001048 3300025302 Bacteria 26253
182 Ga0207426_1004511 3300025302 Bacteria 6743
183 Ga0207426_1008487 3300025302 Bacteria 4143
184 Ga0207426_1068263 3300025302 Bacteria 1000
185 Ga0207426_1076132 3300025302 Unclassified 922
186 Ga0209051_1019758 3300025303 Bacteria 2927
187 Ga0209257_1000280 3300025304 Bacteria 114473
188 Ga0209257_1003838 3300025304 Bacteria 12312
189 Ga0207647_10000116 3300025904 Bacteria 61857
190 Ga0207647_10051839 3300025904 Bacteria 2534
191 Ga0207647_10111127 3300025904 Bacteria 1620
192 Ga0207645_10003546 3300025907 Bacteria 11810
193 Ga0207654_10001630 3300025911 Bacteria 11728
194 Ga0207654_10042968 3300025911 Unclassified 2560
195 Ga0207695_10000066 3300025913 Bacteria 334103
196 Ga0207695_10000648 3300025913 Bacteria 69088
197 Ga0207695_10002900 3300025913 Bacteria 24810
198 Ga0207695_10006837 3300025913 Bacteria 14685
199 Ga0207695_10122037 3300025913 Unclassified 2572
200 Ga0207695_10151179 3300025913 Bacteria 2261
201 Ga0207695_10208037 3300025913 Bacteria 1868
202 Ga0207695_10300709 3300025913 Bacteria 1496
203 Ga0207695_10457837 3300025913 Unclassified 1159
204 Ga0207671_10004762 3300025914 Bacteria 12810
205 Ga0207671_10018319 3300025914 Bacteria 5375
206 Ga0207671_10058847 3300025914 Bacteria 2849
207 Ga0207671_10113888 3300025914 Bacteria 2061
208 Ga0207671_10221702 3300025914 Unclassified 1482
209 Ga0207657_10056236 3300025919 Bacteria 3395
210 Ga0207694_10491071 3300025924 Unclassified 1027
211 Ga0207690_10367044 3300025932 Bacteria 1141
212 Ga0207690_10395742 3300025932 Unclassified 1101
213 Ga0207706_10000007 3300025933 Bacteria 211081
214 Ga0207686_10733264 3300025934 Unclassified 788
215 Ga0207704_10000124 3300025938 Bacteria 41992
216 Ga0207667_10043383 3300025949 Bacteria 4773
217 Ga0207667_10077325 3300025949 Unclassified 3452
218 Ga0207667_10394253 3300025949 Bacteria 1410
219 Ga0207651_10107246 3300025960 Bacteria 2087
220 Ga0207640_10045508 3300025981 Bacteria 2818
221 Ga0207658_10842942 3300025986 Bacteria 833
222 Ga0207677_10043094 3300026023 Bacteria 2998
223 Ga0207677_10167106 3300026023 Unclassified 1716
224 Ga0207639_10035890 3300026041 Bacteria 3670
225 Ga0207639_10036757 3300026041 Bacteria 3632
226 Ga0207639_10075606 3300026041 Bacteria 2649
227 Ga0207639_10240054 3300026041 Bacteria 1575
228 Ga0207702_10311745 3300026078 Bacteria 1496
229 Ga0207648_10003695 3300026089 Bacteria 16019
230 Ga0207674_10031998 3300026116 Bacteria 5520
231 Ga0207683_10021741 3300026121 Bacteria 5499
232 Ga0207698_10279567 3300026142 Bacteria 1543
233 Ga0268266_10000039 3300028379 Bacteria 324579
234 Ga0268266_10000073 3300028379 Bacteria 232074
235 Ga0268266_11091345 3300028379 Bacteria 772
236 Ga0307517_10017796 3300028786 Bacteria 9232
237 Ga0307517_10020980 3300028786 Bacteria 8286
238 Ga0307517_10168785 3300028786 Bacteria 1445
239 Ga0307515_10000172 3300028794 Bacteria 159265
240 Ga0307515_10000349 3300028794 Bacteria 114163
241 Ga0316181_1197256 3300030744 Bacteria 3415
242 Ga0307513_10643078 3300031456 Bacteria 768
243 Ga0307405_10010846 3300031731 Bacteria 4745
244 Ga0307412_10000031 3300031911 Bacteria 207128
245 Ga0307412_10430486 3300031911 Bacteria 1082
246 Ga0307414_10000603 3300032004 Bacteria 18495
247 Ga0307414_10005763 3300032004 Bacteria 6846
248 Ga0307414_10044114 3300032004 Bacteria 3042
249 Ga0307510_10013796 3300033180 Bacteria 9579
250 Ga0307510_10058075 3300033180 Bacteria 4010
251 Ga0395901_0637923 3300038443 Unclassified 1070
252 Ga0451793_1572698 3300041452 Bacteria 788
253 Ga0466972_0007024 3300044658 Bacteria 5650
254 Ga0466964_0043141 3300044706 Unclassified 1829
255 Ga0466970_0019079 3300044765 Bacteria 3554
256 Ga0466957_0293266 3300044842 Bacteria 1091
257 Ga0466959_0128402 3300045049 Unclassified 1798
258 Ga0495638_0000020 3300046460 Bacteria 372434
259 Ga0495638_0012774 3300046460 Bacteria 5739
260 Ga0495638_0269997 3300046460 Unclassified 929
261 Ga0495650_0000095 3300046471 Bacteria 218020
262 Ga0495650_0144468 3300046471 Bacteria 858
263 Ga0495639_0167765 3300046475 Bacteria 1065
264 Ga0495585_0000057 3300046492 Bacteria 113069
265 Ga0495585_0000100 3300046492 Bacteria 91669
266 Ga0495606_0000009 3300046507 Bacteria 306313
267 Ga0495606_0003909 3300046507 Bacteria 15337
268 Ga0495606_0012523 3300046507 Bacteria 6793
269 Ga0495606_0018286 3300046507 Bacteria 5263
270 Ga0495606_0061233 3300046507 Bacteria 2408
271 Ga0495606_0103636 3300046507 Bacteria 1727
272 Ga0495606_0109389 3300046507 Bacteria 1669
273 Ga0495606_0203900 3300046507 Bacteria 1125
274 Ga0495610_0001711 3300046512 Bacteria 19236
275 Ga0495616_0000733 3300046513 Bacteria 24135
276 Ga0495616_0021486 3300046513 Bacteria 3495
277 Ga0495632_0264664 3300046519 Bacteria 768
278 Ga0495637_0018010 3300046520 Bacteria 3281
279 Ga0495637_0065346 3300046520 Bacteria 1481
280 Ga0495643_0306418 3300046522 Bacteria 722
281 Ga0495644_0015171 3300046523 Bacteria 2951
282 Ga0495648_0029349 3300046524 Unclassified 3652
283 Ga0495642_0249631 3300046528 Bacteria 776
284 Ga0495652_0286492 3300046529 Bacteria 1204
285 Ga0495652_0347395 3300046529 Bacteria 1064
286 Ga0495654_0030700 3300046530 Bacteria 2733
287 Ga0495609_0028955 3300046538 Bacteria 2524
288 Ga0495609_0062842 3300046538 Bacteria 1639
289 Ga0495609_0200077 3300046538 Unclassified 835
290 Ga0495633_0006218 3300046558 Bacteria 7130
291 Ga0495633_0216421 3300046558 Bacteria 877
292 Ga0495668_0000121 3300046616 Bacteria 116234
293 Ga0495611_0000338 3300046648 Bacteria 30531
294 Ga0495611_0351508 3300046648 Bacteria 676
295 Ga0495625_0000007 3300046660 Bacteria 565749
296 Ga0495625_0005427 3300046660 Bacteria 11639
297 Ga0495625_0015714 3300046660 Bacteria 5981
298 Ga0495625_0028787 3300046660 Bacteria 4161
299 Ga0495625_0137129 3300046660 Bacteria 1653
300 Ga0495625_0321504 3300046660 Unclassified 985
301 Ga0495625_0424008 3300046660 Bacteria 827
302 Ga0495661_0000576 3300046665 Bacteria 38166
303 Ga0495661_0056890 3300046665 Bacteria 2337
304 Ga0495588_0234941 3300046674 Bacteria 967
305 Ga0495588_0247512 3300046674 Bacteria 940
306 Ga0495658_0041420 3300046683 Bacteria 2566
307 Ga0495649_0000007 3300046694 Bacteria 518037
308 Ga0495660_0009750 3300046810 Bacteria 5596
309 Ga0495660_0071008 3300046810 Bacteria 1847
310 Ga0495683_0043840 3300047323 Bacteria 2251
311 Ga0495683_0128650 3300047323 Bacteria 1196
312 Ga0495687_000040 3300047443 Bacteria 230786
313 Ga0495687_001461 3300047443 Bacteria 21682
314 Ga0495687_004075 3300047443 Bacteria 10125
315 Ga0495687_007879 3300047443 Bacteria 6195
316 Ga0495687_018446 3300047443 Bacteria 3449
317 Ga0495687_019590 3300047443 Bacteria 3315
318 Ga0495681_0240027 3300047470 Bacteria 720
319 Ga0495686_0000040 3300047472 Bacteria 301210
320 Ga0495686_0000086 3300047472 Bacteria 197490
321 Ga0495686_0000365 3300047472 Bacteria 73281
322 Ga0495686_0000420 3300047472 Bacteria 66708
323 Ga0495686_0026635 3300047472 Unclassified 3782
324 Ga0495686_0145905 3300047472 Bacteria 1393
325 Ga0495593_0141199 3300047673 Bacteria 1220
326 Ga0495614_0182072 3300048089 Bacteria 945
327 Ga0495682_0020110 3300049460 Bacteria 2508
328 Ga0495682_0147450 3300049460 Bacteria 840
329 Ga0495682_0206012 3300049460 Bacteria 697
330 nmdc:mga0k408_1967_c1 3300050493 Bacteria 11007
331 nmdc:mga0k408_8096_c1 3300050493 Bacteria 5068
332 Ga0500578_0080349 3300053086 Bacteria 2074
333 Ga0500644_0007149 3300053088 Bacteria 2896
334 Ga0500644_0190043 3300053088 Bacteria 845
335 Ga0500646_0004180 3300053090 Unclassified 3664
336 Ga0500646_0013841 3300053090 Bacteria 2091
337 Ga0500583_0000286 3300053092 Bacteria 17541
338 Ga0500583_0018921 3300053092 Unclassified 2811
339 Ga0500651_0000620 3300053093 Bacteria 17702
340 Ga0500650_0205321 3300053098 Bacteria 896
341 Ga0500562_000083 3300053108 Bacteria 41350
342 Ga0500562_024952 3300053108 Bacteria 1563
343 Ga0500608_076993 3300053122 Bacteria 1579
344 Ga0500614_018600 3300053123 Bacteria 1582
345 Ga0500618_046873 3300053125 Bacteria 984
346 Ga0500642_0016618 3300053130 Bacteria 2801
347 Ga0500642_0089518 3300053130 Unclassified 1421
348 Ga0500655_003300 3300053133 Bacteria 2920
349 Ga0500588_0181512 3300053146 Bacteria 774
350 Ga0500589_004273 3300053147 Bacteria 5342
351 Ga0500604_0001590 3300053151 Bacteria 6373
352 Ga0500616_0000004 3300053153 Bacteria 1002714
353 Ga0500616_0121113 3300053153 Bacteria 1250
354 Ga0500622_0000021 3300053156 Bacteria 268013
355 Ga0500622_0000026 3300053156 Bacteria 235660
356 Ga0500622_0000051 3300053156 Bacteria 145514
357 Ga0500622_0000084 3300053156 Bacteria 100802
358 Ga0500622_0002254 3300053156 Bacteria 14181
359 Ga0500622_0023381 3300053156 Bacteria 3273
360 Ga0500622_0105579 3300053156 Bacteria 1382
361 Ga0500622_0149886 3300053156 Bacteria 1104
362 Ga0500627_0125223 3300053158 Bacteria 1160
363 Ga0500645_028175 3300053730 Bacteria 1701
364 Ga0500661_003617 3300055283 Unclassified 2903
365 2522550393 2522125168 Bacteria 7376607
366 2599481236 2599185184 Bacteria 6430550
367 2842909137 2842903701 Bacteria 6986368
368 2919441624 2919437846 Bacteria 6199444
369 2928081833 2928078545 Bacteria 6534839
370 2928151856 2928147474 Bacteria 6512076
371 2929155853 2929154850 Bacteria 6753285
372 2929241473 2929239360 Bacteria 7745570
373 2929923532 2929921140 Bacteria 8649150
374 2932087163 2932082852 Bacteria 6563563
375 8003154403 8003151029 Bacteria 8187759
376 Ga0070671_100005884
377 SwRhRL2b_contig_2848454
378 JGI24740J21852_10002462
379 JGI24739J22299_10000998
380 JGI24739J22299_10002811
381 JGI24737J22298_10000148
382 JGI24737J22298_10114006
383 JGI24735J21928_10000020
384 JGI24744J21845_10004078
385 JGI25162J39368_1000056
386 JGI25162J39368_1003597
387 JGI25154J39366_1000008
388 JGI25164J39214_1002775
389 JGI25165J46597_1001274
390 JGI25165J46597_1001451
391 JGI25153J46596_10022943
392 rootH1_10058160
393 rootH1_10126330
394 rootH1_10162993
395 rootH2_10001530
396 rootH2_10202333
397 rootL2_10076045
398 rootL2_10105116
399 rootL2_10240688
400 rootH1_10008921
401 rootH1_10025500
402 rootH1_10028162
403 rootH1_10031547
404 rootH1_10072417
405 rootH1_10118308
406 rootH1_10131497
407 rootH1_10153747
408 rootH1_10213198
409 rootH1_10317944
410 JGI25160J50197_1005022
411 JGI25160J50197_1007512
412 Ga0055526_1010976
413 Ga0055526_1025963
414 Ga0055536_1008939
415 Ga0055528_1000179
416 Ga0055530_10004552
417 Ga0055530_10015127
418 Ga0055531_10000167
419 Ga0065165_1000078
420 Ga0065165_1000280
421 Ga0065165_1055859
422 Ga0065714_10002551
423 Ga0065714_10068759
424 Ga0065704_10000219
425 Ga0070676_10002644
426 Ga0068868_100061196
427 Ga0070673_100007295
428 Ga0070673_100983049
429 Ga0070659_100072738
430 Ga0070659_100769340
431 Ga0070678_100011291
432 Ga0070662_100001095
433 Ga0068867_100004580
434 Ga0068853_100005944
435 Ga0068853_100071449
436 Ga0068853_100359366
437 Ga0070672_100313416
438 Ga0070665_100000012
439 Ga0070665_101293355
440 Ga0068855_100020578
441 Ga0068855_100077639
442 Ga0068855_100080195
443 Ga0068857_100030948
444 Ga0068857_100680564
445 Ga0068854_100059679
446 Ga0068854_100251140
447 Ga0068854_100365914
448 Ga0068856_100028882
449 Ga0068856_101034792
450 Ga0068852_100259196
451 Ga0068852_101302025
452 Ga0068852_101532253
453 Ga0075366_10000490
454 Ga0075366_10006342
455 Ga0097621_100000738
456 Ga0068871_100000248
457 Ga0068871_100137971
458 Ga0068871_100244508
459 Ga0068871_100384402
460 Ga0105240_10000242
461 Ga0105240_10000723
462 Ga0105240_10008278
463 Ga0105240_10042805
464 Ga0105240_10045357
465 Ga0105240_10133582
466 Ga0105240_10307864
467 Ga0105240_10368426
468 Ga0105240_10497348
469 Ga0105240_10672911
470 Ga0105241_10001503
471 Ga0105241_10003686
472 Ga0105241_10006704
473 Ga0105241_10053163
474 Ga0105241_10121937
475 Ga0105241_10315767
476 Ga0105241_10460277
477 Ga0105237_10000963
478 Ga0105237_10051675
479 Ga0105237_10083531
480 Ga0105237_10239368
481 Ga0105238_10026567
482 Ga0105238_10057399
483 Ga0105238_10289063
484 Ga0105239_10000008
485 Ga0105239_10000013
486 Ga0105239_10000355
487 Ga0105239_10007983
488 Ga0105239_10036715
489 Ga0105239_10055274
490 Ga0105239_10086694
491 Ga0105239_10090683
492 Ga0105239_10142828
493 Ga0105239_10164884
494 Ga0105239_10229680
495 Ga0105239_10326509
496 Ga0105239_10407311
497 Ga0105246_10062189
498 Ga0157373_10000097
499 Ga0157373_10005535
500 Ga0157373_10020590
501 Ga0157373_10031076
502 Ga0157371_10000708
503 Ga0157371_10019766
504 Ga0157371_10021538
505 Ga0157371_10034303
506 Ga0157370_10003065
507 Ga0157370_10048780
508 Ga0157370_10124383
509 Ga0157370_10467872
510 Ga0157369_10033692
511 Ga0157369_10067633
512 Ga0157369_10343320
513 Ga0157369_10676012
514 Ga0157369_10939769
515 Ga0157374_10000029
516 Ga0157374_10041848
517 Ga0157374_10799002
518 Ga0157374_10900169
519 Ga0157378_10046351
520 Ga0157378_10203076
521 Ga0163162_10000366
522 Ga0163162_10003374
523 Ga0163162_10334044
524 Ga0157372_10001279
525 Ga0157372_10019033
526 Ga0157372_10130786
527 Ga0157372_10256002
528 Ga0157375_10007276
529 Ga0157375_10026140
530 Ga0157375_10354056
531 Ga0157377_10022679
532 Ga0157376_10012023
533 Ga0157376_10106515
534 Ga0163161_10166127
535 Ga0163161_10771383
536 Ga0207427_100482
537 Ga0209437_100124
538 Ga0209437_100170
539 Ga0209646_1000045
540 Ga0209026_1000075
541 Ga0209129_1010879
542 Ga0209233_1000266
543 Ga0209455_1005623
544 Ga0209673_1000014
545 Ga0209673_1000018
546 Ga0209676_1000616
547 Ga0209564_1002610
548 Ga0209564_1003474
549 Ga0209758_1002178
550 Ga0209758_1003892
551 Ga0209758_1006266
552 Ga0209050_1000452
553 Ga0209050_1000481
554 Ga0209050_1062646
555 Ga0207426_1001048
556 Ga0207426_1004511
557 Ga0207426_1008487
558 Ga0207426_1068263
559 Ga0207426_1076132
560 Ga0209051_1019758
561 Ga0209257_1000280
562 Ga0209257_1003838
563 Ga0207647_10000116
564 Ga0207647_10051839
565 Ga0207647_10111127
566 Ga0207645_10003546
567 Ga0207654_10001630
568 Ga0207654_10042968
569 Ga0207695_10000066
570 Ga0207695_10000648
571 Ga0207695_10002900
572 Ga0207695_10006837
573 Ga0207695_10122037
574 Ga0207695_10151179
575 Ga0207695_10208037
576 Ga0207695_10300709
577 Ga0207695_10457837
578 Ga0207671_10004762
579 Ga0207671_10018319
580 Ga0207671_10058847
581 Ga0207671_10113888
582 Ga0207671_10221702
583 Ga0207657_10056236
584 Ga0207694_10491071
585 Ga0207690_10367044
586 Ga0207690_10395742
587 Ga0207706_10000007
588 Ga0207686_10733264
589 Ga0207704_10000124
590 Ga0207667_10043383
591 Ga0207667_10077325
592 Ga0207667_10394253
593 Ga0207651_10107246
594 Ga0207640_10045508
595 Ga0207658_10842942
596 Ga0207677_10043094
597 Ga0207677_10167106
598 Ga0207639_10035890
599 Ga0207639_10036757
600 Ga0207639_10075606
601 Ga0207639_10240054
602 Ga0207702_10311745
603 Ga0207648_10003695
604 Ga0207674_10031998
605 Ga0207683_10021741
606 Ga0207698_10279567
607 Ga0268266_10000039
608 Ga0268266_10000073
609 Ga0268266_11091345
610 Ga0307517_10017796
611 Ga0307517_10020980
612 Ga0307517_10168785
613 Ga0307515_10000172
614 Ga0307515_10000349
615 Ga0316181_1197256
616 Ga0307513_10643078
617 Ga0307405_10010846
618 Ga0307412_10000031
619 Ga0307412_10430486
620 Ga0307414_10000603
621 Ga0307414_10005763
622 Ga0307414_10044114
623 Ga0307510_10013796
624 Ga0307510_10058075
625 Ga0395901_0637923
626 Ga0451793_1572698
627 Ga0466972_0007024
628 Ga0466964_0043141
629 Ga0466970_0019079
630 Ga0466957_0293266
631 Ga0466959_0128402
632 Ga0495638_0000020
633 Ga0495638_0012774
634 Ga0495638_0269997
635 Ga0495650_0000095
636 Ga0495650_0144468
637 Ga0495639_0167765
638 Ga0495585_0000057
639 Ga0495585_0000100
640 Ga0495606_0000009
641 Ga0495606_0003909
642 Ga0495606_0012523
643 Ga0495606_0018286
644 Ga0495606_0061233
645 Ga0495606_0103636
646 Ga0495606_0109389
647 Ga0495606_0203900
648 Ga0495610_0001711
649 Ga0495616_0000733
650 Ga0495616_0021486
651 Ga0495632_0264664
652 Ga0495637_0018010
653 Ga0495637_0065346
654 Ga0495643_0306418
655 Ga0495644_0015171
656 Ga0495648_0029349
657 Ga0495642_0249631
658 Ga0495652_0286492
659 Ga0495652_0347395
660 Ga0495654_0030700
661 Ga0495609_0028955
662 Ga0495609_0062842
663 Ga0495609_0200077
664 Ga0495633_0006218
665 Ga0495633_0216421
666 Ga0495668_0000121
667 Ga0495611_0000338
668 Ga0495611_0351508
669 Ga0495625_0000007
670 Ga0495625_0005427
671 Ga0495625_0015714
672 Ga0495625_0028787
673 Ga0495625_0137129
674 Ga0495625_0321504
675 Ga0495625_0424008
676 Ga0495661_0000576
677 Ga0495661_0056890
678 Ga0495588_0234941
679 Ga0495588_0247512
680 Ga0495658_0041420
681 Ga0495649_0000007
682 Ga0495660_0009750
683 Ga0495660_0071008
684 Ga0495683_0043840
685 Ga0495683_0128650
686 Ga0495687_000040
687 Ga0495687_001461
688 Ga0495687_004075
689 Ga0495687_007879
690 Ga0495687_018446
691 Ga0495687_019590
692 Ga0495681_0240027
693 Ga0495686_0000040
694 Ga0495686_0000086
695 Ga0495686_0000365
696 Ga0495686_0000420
697 Ga0495686_0026635
698 Ga0495686_0145905
699 Ga0495593_0141199
700 Ga0495614_0182072
701 Ga0495682_0020110
702 Ga0495682_0147450
703 Ga0495682_0206012
704 nmdc:mga0k408_1967_c1
705 nmdc:mga0k408_8096_c1
706 Ga0500578_0080349
707 Ga0500644_0007149
708 Ga0500644_0190043
709 Ga0500646_0004180
710 Ga0500646_0013841
711 Ga0500583_0000286
712 Ga0500583_0018921
713 Ga0500651_0000620
714 Ga0500650_0205321
715 Ga0500562_000083
716 Ga0500562_024952
717 Ga0500608_076993
718 Ga0500614_018600
719 Ga0500618_046873
720 Ga0500642_0016618
721 Ga0500642_0089518
722 Ga0500655_003300
723 Ga0500588_0181512
724 Ga0500589_004273
725 Ga0500604_0001590
726 Ga0500616_0000004
727 Ga0500616_0121113
728 Ga0500622_0000021
729 Ga0500622_0000026
730 Ga0500622_0000051
731 Ga0500622_0000084
732 Ga0500622_0002254
733 Ga0500622_0023381
734 Ga0500622_0105579
735 Ga0500622_0149886
736 Ga0500627_0125223
737 Ga0500645_028175
738 Ga0500661_003617
739 2522550393
740 2599481236
741 2842909137
742 2919441624
743 2928081833
744 2928151856
745 2929155853
746 2929241473
747 2929923532
748 2932087163
749 8003154403

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00027

cNMP_binding

Cyclic nucleotide-binding domain

59

149

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dn7-assembly1.cif.gz_A cyclic nucleotide binding regulatory protein from cytophaga hutchinsonii. 0.8155 12 153
3gyd-assembly1.cif.gz_A crystal structure of a cyclic nucleotide-binding domain (mfla_1926) from methylobacillus flagellatus kt at 1.79 a resolution 0.8087 6 151
3dn7-assembly1.cif.gz_A cyclic nucleotide binding regulatory protein from cytophaga hutchinsonii. 0.7858 12 153
8qto-assembly1.cif.gz_A-2 crystal structure of holo-l28h-fnr of a. fischeri 0.773 10 197
5kjx-assembly1.cif.gz_A co-crystal structure of pka ri alpha cnb-b domain with camp 0.7684 7 121
ID Description Score Start End Superfamily
3dn7A00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8147 12 152 2.60.120.10
af_A0A1D6G3C8_362_502_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8097 8 149 2.60.120.10
af_A0A1D6G3C8_362_502_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.7994 8 149 2.60.120.10
3dn7A00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.7895 12 152 2.60.120.10
af_A0A0R4IEI6_519_695_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.7733 3 133 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A1T5NYD5-F1-model_v4 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases 0.9164 9 198 GO:0016301
AF-A0A6A2FQD1-F1-model_v4 Crp/Fnr family transcriptional regulator 0.913 11 197
AF-A0A317LUJ3-F1-model_v4 CRP-like cAMP-binding protein 0.9078 2 197
AF-A0A1H7A877-F1-model_v4 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases 0.9062 7 197 GO:0016301
AF-C6W1Q6-F1-model_v4 Putative transcriptional regulator, Crp/Fnr family 0.9033 1 197

Map