F427213

General Info

Members Datasets Scaffolds Average Seq Length
375 327 152 1028

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842495871|2842500165
Length 1155
Sequence AWSIRNPVPAVLLFILLTAGGLIAFERLSVQNFPDMDLPTVEIRATLEGAAPSQLETEVARKIEDKLASLSLLDHITTKITDGTVAISVSFQIGKDGEEALNEVRNAVDSAGGDLPPAMQAPNISRAMLQGSTLIAFAVRSTRLDQTELSWFVDNDMTKALLAIPGVGKVSRVGGVDREVHVDLDPQLMSSLDISAATISSGLRSVQSDTSGGRGDIGGTKQTIRTIGAVSSIEELKALAIPLPSGARVRLDEIGTVTDSFADRSSIALLDGKPVIAVEIKRSNGFSDTAVAAAIETAVQDFARANPDVDIVQAYSTVGPIIENYDGSMQMLYEGAILAIVVVWLFLRDWRATFLSAIALPLSVIPTFAIMYLADFSLNTVTLLALSLVVGILVDDAIVEIENIARHMQMGKSAKSSALEAADEIGLAVIATTLTLVAVFLPTAFMSGIPGLIFRQFGVTASVAVLASLLVARLLTPMMATYMMKVHPIAAKDGRIMRGYMTLVKACLHHRLLTTICVLAFLGLSVATIPLLGSGFLPASDDAQTQVTITLQPGTPIEKTDALTRRAADIIARLPDVTHVFTSVGTVSSGDLLDSATTVDTASASLVVDLKKASERKLSQLDIENHIRQALGILPGARIEVGSGGNGTRLDITLASDDAGALNKAAGALEEQLRTLPGIGAVTSSASLQAPEIRIVPDLDRAAALGVTAESISEAVRIATGGDYSSALAKLNLPQRQLDIRVRFDPSNRKMLEDIASLRVAGSRGSVDLDSVADVSIGSSPSEISRIDRSRNVVLSVELNGRVLSDIYREAQALPALRNLPQGVKLVEQGELERRSDLFDSFGIAMAIGVFCIYAVLVLLFHDFFQPLTILMALPLSLGGALLPLVLTGTSFSMPVIIGLLMLMGVVTKNSILLVEYAIMSRRAGASRLDALVDACHKRARPIVMTTMAMGGGMLPVALSLSGGDTSFRQPMAIVVIGGLTTSTVLSLLVIPVVFTFVDDFLLFLRRVIGAGQPKASSATAEQESIPNDQRPRRGKSASQSEALAGPSSKSLSHGRPWEETAWKGKALVGRAATNKSADIRHVGGYGLREILYAGLLRDAASGHGDHWPTTAGRLSVQDGGRPICEAAKSLTPGDRPKRSQAGYFGLPPRLDLIF

Samples

Sample ID Description Type Environment
1 2509276019 Ensifer aridi TW10 Isolate Nodule
2 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
3 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
4 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
5 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
6 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
7 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
8 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
9 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
10 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
11 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
12 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
13 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
14 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
15 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
16 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
17 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
18 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
19 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
20 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
21 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
22 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
23 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
24 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
25 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
26 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
27 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
28 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
29 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
30 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
31 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
32 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
33 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
34 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
35 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
36 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
37 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
38 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
39 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
40 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
41 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
42 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
43 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
44 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
45 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
46 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
47 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
48 2599185318 Pseudomonas sp. NFACC13-1 Isolate Rhizoplane
49 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
50 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
51 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
52 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
53 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
54 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
55 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
56 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
57 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
58 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
59 2718217927 Rhizobium sp. N324 Isolate Nodule
60 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
61 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
62 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
63 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
64 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
65 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
66 2718218423 Rhizobium sp. N941 Isolate Nodule
67 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
68 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
69 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
70 2721755809 Rhizobium sp. N541 Isolate Nodule
71 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
72 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
73 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
74 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
75 2738541307 Variovorax sp. GV008 Isolate Unclassified
76 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
77 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
78 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
79 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
80 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
81 2791355256 Rhizobium sp. M10 Isolate Nodule
82 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
83 2791355261 Rhizobium sp. J15 Isolate Nodule
84 2791355262 Rhizobium sp. M1 Isolate Nodule
85 2791355263 Rhizobium chutanense C5 Isolate Nodule
86 2791355266 Rhizobium sp. L43 Isolate Nodule
87 2791355267 Rhizobium sp. L18 Isolate Nodule
88 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
89 2802429633 Rhizobium anhuiense J3 Isolate Nodule
90 2802429634 Rhizobium anhuiense S10 Isolate Nodule
91 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
92 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
93 2802429637 Rhizobium anhuiense C15 Isolate Nodule
94 2808606361 Pseudomonas sp. SJZ075 Isolate Rhizosphere
95 2808606376 Pseudomonas sp. SJZ074 Isolate Rhizosphere
96 2808606378 Pseudomonas sp. SJZ078 Isolate Rhizosphere
97 2808606380 Pseudomonas sp. SJZ085 Isolate Rhizosphere
98 2808606383 Pseudomonas sp. SJZ124 Isolate Rhizosphere
99 2808606389 Pseudomonas sp. SJZ101 Isolate Rhizosphere
100 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
101 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
102 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
103 2838061910 Rhizobium phaseoli L15 Isolate Nodule
104 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
105 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
106 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
107 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
108 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
109 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
110 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
111 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
112 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
113 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
114 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
115 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
116 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
117 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
118 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
119 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
120 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
121 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
122 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
123 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
124 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
125 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
126 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
127 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
128 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
129 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
130 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
131 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
132 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
133 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
134 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
135 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
136 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
137 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
138 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
139 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
140 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
141 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
142 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
143 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
144 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
145 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
146 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
147 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
148 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
149 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
150 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
151 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
152 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
153 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
154 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
155 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
156 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
157 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
158 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
159 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
160 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
161 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
162 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
163 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
164 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
165 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
166 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
167 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
168 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
169 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
170 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
171 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
172 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
173 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
174 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
175 2936381700 Rhizobium chutanense C16 Isolate Unclassified
176 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
177 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
178 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
179 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
180 2988728565 Pseudomonas corrugata RM1-1-4 Isolate Rhizosphere
181 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
182 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
183 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
184 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
185 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
186 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
187 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
188 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
189 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
190 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
191 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
192 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
193 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
194 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
195 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
196 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
197 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
198 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
199 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
200 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
201 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
202 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
203 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
204 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
205 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
206 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
207 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
208 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
209 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
210 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
211 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
212 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
213 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
214 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
215 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
216 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
217 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
218 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
219 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
220 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
221 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
222 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
223 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
224 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
225 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
226 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
227 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
228 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
229 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
230 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
231 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
232 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
233 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
234 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
235 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
236 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
237 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
238 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
239 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
240 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
241 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
242 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
243 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
244 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
245 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
246 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
247 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
248 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
249 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
250 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
251 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
252 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
253 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
254 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
255 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
256 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
257 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
258 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
259 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
260 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
261 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
262 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
263 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
264 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
265 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
266 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
267 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
268 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
269 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
270 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
271 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
272 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
273 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
274 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
275 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
276 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
277 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
278 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
279 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
280 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
281 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
282 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
283 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
284 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
285 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
286 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
287 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
288 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
289 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
290 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
291 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
292 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
293 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
294 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
295 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
296 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
297 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
298 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
299 8005275841 Rhizobium sp. N4311 Isolate Nodule
300 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
301 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
302 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
303 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
304 8005382845 Rhizobium sp. R634 Isolate Nodule
305 8005395548 Rhizobium sp. R339 Isolate Nodule
306 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
307 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
308 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
309 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
310 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
311 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
312 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
313 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
314 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
315 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
316 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
317 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
318 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
319 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
320 8018176218 Rhizobium sp. N122 Isolate Nodule
321 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
322 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
323 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
324 8024501048 Rhizobium sp. H4 Isolate Nodule
325 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
326 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
327 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 40.53
Metatranscriptomes 0
Isolates 59.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.6
Nodule 42.13
Rhizoplane 4.27
Rhizosphere 20.8
Stem 0
Stem Tuber 0
Unclassified 11.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000025 3300002737 Bacteria 228879
2 JGI25162J39368_1000263 3300002737 Bacteria 50433
3 JGI25152J39213_1000718 3300002773 Bacteria 17145
4 JGI25152J39213_1001330 3300002773 Bacteria 10907
5 JGI25152J39213_1002153 3300002773 Bacteria 7721
6 JGI25165J46597_1000054 3300003214 Bacteria 228891
7 JGI25153J46596_10001008 3300003215 Bacteria 17132
8 JGI25153J46596_10001705 3300003215 Bacteria 13039
9 JGI25153J46596_10004573 3300003215 Bacteria 7423
10 JGI25153J46596_10007165 3300003215 Bacteria 5530
11 rootH2_10089359 3300003320 Bacteria 5545
12 rootH1_10034261 3300003323 Bacteria 6873
13 Ga0055538_1000026 3300003751 Bacteria 228891
14 Ga0055539_1000033 3300003752 Bacteria 228891
15 Ga0055533_1000044 3300003756 Bacteria 228891
16 Ga0055525_1000052 3300003759 Bacteria 228891
17 Ga0055526_1001921 3300003771 Bacteria 14376
18 Ga0055526_1010938 3300003771 Bacteria 4153
19 Ga0055524_1000325 3300003775 Bacteria 44894
20 Ga0055536_1000017 3300003781 Bacteria 221741
21 Ga0055528_1000260 3300003790 Bacteria 44906
22 Ga0055528_1002512 3300003790 Bacteria 9773
23 Ga0055530_10000297 3300003791 Bacteria 45176
24 Ga0055540_1000107 3300003792 Bacteria 92183
25 Ga0055540_1001242 3300003792 Bacteria 15662
26 Ga0055541_1000069 3300003841 Bacteria 94648
27 Ga0070706_100013960 3300005467 Bacteria 7420
28 Ga0070665_100003467 3300005548 Bacteria 16809
29 Ga0105244_10008857 3300009036 Bacteria 6242
30 Ga0105237_10015503 3300009545 Bacteria 7930
31 Ga0123342_1005026 3300009766 Bacteria 19595
32 Ga0105239_10002528 3300010375 Bacteria 23243
33 Ga0157370_10003004 3300013104 Bacteria 20024
34 Ga0157369_10012220 3300013105 Bacteria 9749
35 Ga0182007_10001289 3300015262 Bacteria 13564
36 Ga0182007_10004539 3300015262 Bacteria 6277
37 Ga0182005_1000995 3300015265 Bacteria 12216
38 Ga0209784_100020 3300025224 Bacteria 412353
39 Ga0209566_100020 3300025225 Bacteria 412353
40 Ga0209674_100035 3300025226 Bacteria 412353
41 Ga0209563_100038 3300025230 Bacteria 412353
42 Ga0209563_101162 3300025230 Bacteria 7390
43 Ga0207427_101379 3300025231 Bacteria 8905
44 Ga0209437_100066 3300025233 Bacteria 327883
45 Ga0207425_1000399 3300025245 Bacteria 29266
46 Ga0209677_100031 3300025253 Bacteria 329719
47 Ga0209677_100376 3300025253 Bacteria 27342
48 Ga0209129_1000122 3300025258 Bacteria 135306
49 Ga0209129_1000891 3300025258 Bacteria 18344
50 Ga0209129_1001295 3300025258 Bacteria 14261
51 Ga0209233_1000060 3300025261 Bacteria 412379
52 Ga0209233_1000097 3300025261 Bacteria 295452
53 Ga0209673_1000567 3300025273 Bacteria 59050
54 Ga0209673_1001355 3300025273 Bacteria 24401
55 Ga0209673_1001589 3300025273 Bacteria 20082
56 Ga0209676_1000107 3300025292 Bacteria 221793
57 Ga0209025_1003108 3300025294 Bacteria 16277
58 Ga0209025_1011389 3300025294 Bacteria 5867
59 Ga0209564_1000266 3300025295 Bacteria 110519
60 Ga0209564_1000592 3300025295 Bacteria 57093
61 Ga0209758_1000091 3300025297 Bacteria 242583
62 Ga0209758_1000130 3300025297 Bacteria 184456
63 Ga0209758_1000485 3300025297 Bacteria 65234
64 Ga0209758_1000661 3300025297 Bacteria 51579
65 Ga0209758_1001339 3300025297 Bacteria 29798
66 Ga0209758_1006274 3300025297 Bacteria 8645
67 Ga0209050_1000056 3300025298 Bacteria 338703
68 Ga0209050_1000088 3300025298 Bacteria 257442
69 Ga0209256_1000691 3300025299 Bacteria 44958
70 Ga0209256_1005280 3300025299 Bacteria 7528
71 Ga0209256_1006364 3300025299 Bacteria 6295
72 Ga0209051_1000038 3300025303 Bacteria 320926
73 Ga0209051_1009539 3300025303 Bacteria 4994
74 Ga0209257_1005849 3300025304 Bacteria 8334
75 Ga0207655_1000022 3300025728 Bacteria 483933
76 Ga0207684_10043801 3300025910 Bacteria 3795
77 Ga0207695_10000458 3300025913 Bacteria 88734
78 Ga0207671_10000577 3300025914 Bacteria 49208
79 Ga0268266_10043584 3300028379 Bacteria 3835
80 Ga0268256_1002952 3300030500 Bacteria 8086
81 Ga0265328_10000027 3300031239 Bacteria 114609
82 Ga0265327_10000203 3300031251 Bacteria 124148
83 Ga0307514_10002158 3300031649 Bacteria 21139
84 Ga0307412_10009453 3300031911 Bacteria 5595
85 Ga0395905_0023949 3300037471 Bacteria 5764
86 Ga0439451_000364 3300042009 Bacteria 8764
87 Ga0439456_002811 3300042013 Bacteria 3508
88 Ga0451577_0000256 3300042876 Bacteria 104951
89 Ga0451577_0002509 3300042876 Bacteria 21745
90 Ga0466961_0000148 3300044693 Bacteria 47807
91 Ga0453684_0002684 3300044712 Bacteria 42354
92 Ga0466959_0004614 3300045049 Bacteria 9256
93 Ga0451576_0003371 3300045051 Bacteria 22095
94 Ga0495638_0000983 3300046460 Bacteria 28649
95 Ga0495651_0010259 3300046462 Bacteria 7194
96 Ga0495650_0000946 3300046471 Bacteria 33556
97 Ga0495610_0007576 3300046512 Bacteria 7189
98 Ga0495610_0007607 3300046512 Bacteria 7174
99 Ga0495616_0000294 3300046513 Bacteria 40512
100 Ga0495628_0010495 3300046516 Bacteria 7866
101 Ga0495631_0000614 3300046518 Bacteria 23481
102 Ga0495637_0003438 3300046520 Bacteria 8410
103 Ga0495648_0000098 3300046524 Bacteria 109074
104 Ga0495652_0019178 3300046529 Bacteria 6093
105 Ga0495654_0000941 3300046530 Bacteria 21547
106 Ga0495633_0000279 3300046558 Bacteria 59067
107 Ga0495625_0000176 3300046660 Bacteria 99062
108 Ga0495625_0009003 3300046660 Bacteria 8431
109 Ga0495661_0005117 3300046665 Bacteria 9347
110 Ga0495588_0002032 3300046674 Bacteria 8654
111 Ga0495646_0015032 3300046680 Bacteria 4916
112 Ga0495624_0019008 3300046690 Bacteria 4590
113 Ga0495593_0003838 3300047673 Bacteria 8972
114 Ga0495614_0006950 3300048089 Bacteria 5054
115 Ga0496102_0001638 3300048905 Bacteria 19737
116 Ga0496103_0001225 3300048906 Bacteria 17593
117 Ga0496116_0004806 3300048919 Bacteria 12749
118 Ga0496117_0002435 3300048920 Bacteria 23487
119 Ga0496118_0002792 3300048921 Bacteria 22868
120 Ga0496119_0002764 3300048922 Bacteria 18876
121 Ga0496120_0001857 3300048923 Bacteria 23511
122 Ga0496121_0006651 3300048924 Bacteria 14232
123 Ga0496122_0003850 3300048925 Bacteria 19276
124 Ga0496123_0010553 3300048926 Bacteria 8143
125 Ga0496123_0010694 3300048926 Bacteria 8068
126 Ga0496123_0033778 3300048926 Bacteria 3675
127 Ga0496124_0000079 3300048927 Bacteria 212057
128 Ga0496124_0021867 3300048927 Bacteria 5884
129 Ga0496125_0002953 3300048928 Bacteria 21372
130 Ga0496125_0035757 3300048928 Bacteria 4350
131 Ga0501033_0000035 3300049570 Bacteria 150558
132 Ga0501035_0000388 3300049822 Bacteria 50606
133 Ga0500643_001003 3300053087 Bacteria 17273
134 Ga0500644_0000083 3300053088 Bacteria 58133
135 Ga0500651_0000242 3300053093 Bacteria 33458
136 Ga0500562_005423 3300053108 Bacteria 3204
137 Ga0500571_000184 3300053110 Bacteria 22472
138 Ga0500592_000029 3300053116 Bacteria 48246
139 Ga0500593_000097 3300053117 Bacteria 32867
140 Ga0500594_0000256 3300053118 Bacteria 12584
141 Ga0500595_003252 3300053119 Bacteria 7669
142 Ga0500607_000049 3300053121 Bacteria 80941
143 Ga0500626_008950 3300053128 Bacteria 4141
144 Ga0500655_000268 3300053133 Bacteria 12145
145 Ga0500658_0000028 3300053134 Bacteria 105688
146 Ga0500559_0006526 3300053136 Bacteria 5266
147 Ga0500568_0000372 3300053139 Bacteria 34393
148 Ga0500568_0000826 3300053139 Bacteria 21790
149 Ga0500616_0000356 3300053153 Bacteria 65087
150 Ga0500616_0000704 3300053153 Bacteria 38802
151 Ga0500616_0003258 3300053153 Bacteria 12561
152 Ga0500627_0000111 3300053158 Bacteria 26852

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2842285085 2842289272 843
2 iso_pu_bacteria 2842402390 2842407478 843
3 iso_pu_bacteria 2842409023 2842413273 843
4 iso_pu_bacteria 2842415677 2842419916 843
5 3300025910 Ga0207684_10043801 Ga0207684_100438011 852
6 3300042013 Ga0439456_002811 Ga0439456_002811_287_3361 917
7 3300003320 rootH2_10089359 rootH2_100893592 934
8 3300003323 rootH1_10034261 rootH1_100342612 934
9 3300044693 Ga0466961_0000148 Ga0466961_0000148_13521_16595 935
10 3300045049 Ga0466959_0004614 Ga0466959_0004614_654_3728 935
11 3300048926 Ga0496123_0033778 Ga0496123_0033778_74_3193 936
12 iso_pu_bacteria 2857516855 2857523980 936
13 iso_pu_bacteria 2857516855 2857520818 937
14 3300030500 Ga0268256_1002952 Ga0268256_10029524 941
15 3300046680 Ga0495646_0015032 Ga0495646_0015032_373_3441 944
16 3300031649 Ga0307514_10002158 Ga0307514_100021589 951
17 3300046512 Ga0495610_0007576 Ga0495610_0007576_3886_6930 951
18 3300046513 Ga0495616_0000294 Ga0495616_0000294_1233_4277 951
19 3300046518 Ga0495631_0000614 Ga0495631_0000614_16403_19447 951
20 3300046660 Ga0495625_0009003 Ga0495625_0009003_4398_7442 951
21 3300047673 Ga0495593_0003838 Ga0495593_0003838_1690_4734 951
22 3300048089 Ga0495614_0006950 Ga0495614_0006950_998_4042 951
23 3300053087 Ga0500643_001003 Ga0500643_001003_3979_7023 951
24 3300053093 Ga0500651_0000242 Ga0500651_0000242_26038_29082 951
25 3300053108 Ga0500562_005423 Ga0500562_005423_96_3140 951
26 3300053110 Ga0500571_000184 Ga0500571_000184_11038_14082 951
27 3300053117 Ga0500593_000097 Ga0500593_000097_1254_4298 951
28 3300053118 Ga0500594_0000256 Ga0500594_0000256_1852_4896 951
29 3300053121 Ga0500607_000049 Ga0500607_000049_19673_22717 951
30 3300053128 Ga0500626_008950 Ga0500626_008950_1029_4073 951
31 3300053133 Ga0500655_000268 Ga0500655_000268_4902_7946 951
32 3300053134 Ga0500658_0000028 Ga0500658_0000028_98268_101312 951
33 3300053136 Ga0500559_0006526 Ga0500559_0006526_1210_4254 951
34 3300002773 JGI25152J39213_1002153 JGI25152J39213_10021535 952
35 3300003771 Ga0055526_1010938 Ga0055526_10109381 952
36 3300025258 Ga0209129_1000122 Ga0209129_10001224 952
37 3300025295 Ga0209564_1000266 Ga0209564_100026633 952
38 3300025297 Ga0209758_1000091 Ga0209758_1000091104 952
39 3300003781 Ga0055536_1000017 Ga0055536_100001775 957
40 3300003791 Ga0055530_10000297 Ga0055530_1000029719 957
41 3300025292 Ga0209676_1000107 Ga0209676_1000107139 957
42 3300025298 Ga0209050_1000056 Ga0209050_1000056214 957
43 3300025298 Ga0209050_1000088 Ga0209050_1000088130 957
44 3300025299 Ga0209256_1006364 Ga0209256_10063642 957
45 3300044712 Ga0453684_0002684 Ga0453684_0002684_23761_26847 958
46 3300005548 Ga0070665_100003467 Ga0070665_1000034679 959
47 3300028379 Ga0268266_10043584 Ga0268266_100435842 959
48 3300031239 Ga0265328_10000027 Ga0265328_1000002747 960
49 3300003771 Ga0055526_1001921 Ga0055526_100192110 961
50 3300003775 Ga0055524_1000325 Ga0055524_100032511 961
51 3300003790 Ga0055528_1000260 Ga0055528_100026011 961
52 3300025273 Ga0209673_1000567 Ga0209673_100056730 961
53 3300025295 Ga0209564_1000592 Ga0209564_100059216 961
54 3300025299 Ga0209256_1000691 Ga0209256_100069110 961
55 3300031251 Ga0265327_10000203 Ga0265327_100002031 961
56 3300046690 Ga0495624_0019008 Ga0495624_0019008_430_3498 961
57 3300048927 Ga0496124_0000079 Ga0496124_0000079_190589_193666 961
58 3300048928 Ga0496125_0035757 Ga0496125_0035757_848_3925 961
59 iso_pu_bacteria 2998344455 2998346618 961
60 3300002773 JGI25152J39213_1000718 JGI25152J39213_10007184 962
61 3300003215 JGI25153J46596_10001008 JGI25153J46596_100010084 962
62 3300005467 Ga0070706_100013960 Ga0070706_1000139603 962
63 3300025245 Ga0207425_1000399 Ga0207425_10003999 962
64 3300025258 Ga0209129_1000891 Ga0209129_100089114 962
65 3300025294 Ga0209025_1011389 Ga0209025_10113893 962
66 3300025297 Ga0209758_1001339 Ga0209758_100133920 962
67 iso_pu_bacteria 2643221622 2644126766 962
68 iso_pu_bacteria 2738541307 2738885485 962
69 3300009036 Ga0105244_10008857 Ga0105244_100088572 963
70 3300025728 Ga0207655_1000022 Ga0207655_1000022233 963
71 3300002773 JGI25152J39213_1001330 JGI25152J39213_10013304 964
72 3300003215 JGI25153J46596_10004573 JGI25153J46596_100045733 964
73 3300025258 Ga0209129_1001295 Ga0209129_10012957 964
74 3300025294 Ga0209025_1003108 Ga0209025_100310813 964
75 3300025297 Ga0209758_1000661 Ga0209758_100066155 964
76 3300053153 Ga0500616_0000356 Ga0500616_0000356_56288_59353 964
77 iso_pu_bacteria 2513237159 2514000466 964
78 iso_pu_bacteria 2842521101 2842523448 964
79 iso_pu_bacteria 2894510363 2894515206 964
80 3300053116 Ga0500592_000029 Ga0500592_000029_16484_19588 965
81 3300053158 Ga0500627_0000111 Ga0500627_0000111_20943_24047 965
82 iso_pu_bacteria 2512047086 2512528751 965
83 iso_pu_bacteria 2970524798 2970530722 965
84 iso_pu_bacteria 2509276019 2509377038 966
85 iso_pu_bacteria 2513237084 2513570500 966
86 iso_pu_bacteria 2515075009 2515110228 966
87 iso_pu_bacteria 2522572158 2523108135 966
88 iso_pu_bacteria 2558860100 2558864660 966
89 iso_pu_bacteria 2582581298 2585221772 966
90 iso_pu_bacteria 2585427529 2585544058 966
91 iso_pu_bacteria 2585427608 2585901807 966
92 iso_pu_bacteria 2765235802 2765464497 966
93 iso_pu_bacteria 2791355091 2792624042 966
94 iso_pu_bacteria 2791355092 2792629428 966
95 iso_pu_bacteria 2838016132 2838016814 966
96 iso_pu_bacteria 2842285085 2842286714 966
97 iso_pu_bacteria 2842402390 2842403733 966
98 iso_pu_bacteria 2842409023 2842410565 966
99 iso_pu_bacteria 2842415677 2842417211 966
100 iso_pu_bacteria 2842495871 2842500165 966
101 iso_pu_bacteria 2850079185 2850085150 966
102 iso_pu_bacteria 2856342000 2856345751 966
103 iso_pu_bacteria 2896384573 2896391499 966
104 iso_pu_bacteria 2970524798 2970527960 966
105 iso_pu_bacteria 8005289223 8005291208 966
106 iso_pu_bacteria 8005460587 8005460867 966
107 iso_pu_bacteria 8005688590 8005690142 966
108 iso_pu_bacteria 8054558443 8054562411 966
109 3300046530 Ga0495654_0000941 Ga0495654_0000941_111_3227 967
110 iso_pu_bacteria 2585427633 2585993349 967
111 iso_pu_bacteria 2857349434 2857357236 967
112 iso_pu_bacteria 2961127735 2961127944 967
113 iso_pu_bacteria 2977942078 2977949417 967
114 iso_pu_bacteria 2987636660 2987644627 967
115 iso_pu_bacteria 3004203850 3004210911 967
116 iso_pu_bacteria 8005645114 8005651224 967
117 3300031911 Ga0307412_10009453 Ga0307412_100094532 968
118 3300042009 Ga0439451_000364 Ga0439451_000364_5011_8085 968
119 3300042876 Ga0451577_0000256 Ga0451577_0000256_71826_74894 968
120 3300046524 Ga0495648_0000098 Ga0495648_0000098_68065_71139 968
121 3300053088 Ga0500644_0000083 Ga0500644_0000083_23505_26579 968
122 iso_pu_bacteria 2582581308 2585277737 968
123 iso_pu_bacteria 2585427530 2585557230 968
124 iso_pu_bacteria 2615840626 2616310584 968
125 iso_pu_bacteria 2818991453 2819643111 968
126 iso_pu_bacteria 8005645114 8005651269 968
127 3300003792 Ga0055540_1000107 Ga0055540_100010769 969
128 3300003792 Ga0055540_1001242 Ga0055540_100124213 969
129 3300025230 Ga0209563_101162 Ga0209563_1011622 969
130 3300025273 Ga0209673_1001355 Ga0209673_100135510 969
131 3300025297 Ga0209758_1000130 Ga0209758_100013019 969
132 3300025303 Ga0209051_1000038 Ga0209051_1000038220 969
133 3300025304 Ga0209257_1005849 Ga0209257_10058497 969
134 3300045051 Ga0451576_0003371 Ga0451576_0003371_11129_14197 969
135 3300049570 Ga0501033_0000035 Ga0501033_0000035_125352_128447 969
136 3300049822 Ga0501035_0000388 Ga0501035_0000388_27837_30932 969
137 3300009766 Ga0123342_1005026 Ga0123342_10050265 970
138 3300046512 Ga0495610_0007607 Ga0495610_0007607_586_3678 970
139 3300046520 Ga0495637_0003438 Ga0495637_0003438_3505_6597 970
140 3300046558 Ga0495633_0000279 Ga0495633_0000279_51504_54623 970
141 3300046674 Ga0495588_0002032 Ga0495588_0002032_3520_6612 970
142 3300048926 Ga0496123_0010553 Ga0496123_0010553_1306_4386 970
143 3300053139 Ga0500568_0000826 Ga0500568_0000826_14550_17630 970
144 iso_pu_bacteria 2513237144 2513912100 970
145 iso_pu_bacteria 2599185212 2599612820 970
146 iso_pu_bacteria 2599185311 2599993326 970
147 iso_pu_bacteria 2599185318 2600037516 970
148 iso_pu_bacteria 2599185319 2600042929 970
149 iso_pu_bacteria 2599185322 2600060099 970
150 iso_pu_bacteria 2599185323 2600063360 970
151 iso_pu_bacteria 2643221650 2644283910 970
152 iso_pu_bacteria 2667528176 2671126267 970
153 iso_pu_bacteria 2885350715 2885351565 970
154 iso_pu_bacteria 2929144301 2929147611 970
155 3300025297 Ga0209758_1000485 Ga0209758_100048517 971
156 3300042876 Ga0451577_0002509 Ga0451577_0002509_13724_16798 971
157 3300053139 Ga0500568_0000372 Ga0500568_0000372_4840_7935 971
158 3300053153 Ga0500616_0000704 Ga0500616_0000704_26499_29594 971
159 3300003215 JGI25153J46596_10001705 JGI25153J46596_100017055 972
160 3300003215 JGI25153J46596_10007165 JGI25153J46596_100071653 972
161 3300003790 Ga0055528_1002512 Ga0055528_10025125 972
162 3300009545 Ga0105237_10015503 Ga0105237_100155034 972
163 3300010375 Ga0105239_10002528 Ga0105239_100025287 972
164 3300013104 Ga0157370_10003004 Ga0157370_1000300411 972
165 3300013105 Ga0157369_10012220 Ga0157369_100122203 972
166 3300015262 Ga0182007_10004539 Ga0182007_100045392 972
167 3300025253 Ga0209677_100376 Ga0209677_10037620 972
168 3300025261 Ga0209233_1000097 Ga0209233_1000097256 972
169 3300025273 Ga0209673_1001589 Ga0209673_100158910 972
170 3300025297 Ga0209758_1006274 Ga0209758_10062745 972
171 3300025299 Ga0209256_1005280 Ga0209256_10052804 972
172 3300025303 Ga0209051_1009539 Ga0209051_10095391 972
173 3300025913 Ga0207695_10000458 Ga0207695_1000045883 972
174 3300025914 Ga0207671_10000577 Ga0207671_100005774 972
175 3300048905 Ga0496102_0001638 Ga0496102_0001638_15351_18488 972
176 3300048906 Ga0496103_0001225 Ga0496103_0001225_6928_10065 972
177 3300048919 Ga0496116_0004806 Ga0496116_0004806_7633_10770 972
178 3300048920 Ga0496117_0002435 Ga0496117_0002435_4864_8001 972
179 3300048921 Ga0496118_0002792 Ga0496118_0002792_15485_18622 972
180 3300048922 Ga0496119_0002764 Ga0496119_0002764_336_3473 972
181 3300048923 Ga0496120_0001857 Ga0496120_0001857_15564_18701 972
182 3300048924 Ga0496121_0006651 Ga0496121_0006651_1646_4783 972
183 3300048925 Ga0496122_0003850 Ga0496122_0003850_9667_12804 972
184 3300048926 Ga0496123_0010694 Ga0496123_0010694_475_3612 972
185 3300048927 Ga0496124_0021867 Ga0496124_0021867_307_3444 972
186 3300048928 Ga0496125_0002953 Ga0496125_0002953_9675_12812 972
187 iso_pu_bacteria 2510461076 2510893722 972
188 iso_pu_bacteria 2513237085 2513575862 972
189 iso_pu_bacteria 2513237088 2513597577 972
190 iso_pu_bacteria 2513237103 2513712286 972
191 iso_pu_bacteria 2513237162 2514022651 972
192 iso_pu_bacteria 2515154113 2515636622 972
193 iso_pu_bacteria 2515154114 2515644088 972
194 iso_pu_bacteria 2515154116 2515657869 972
195 iso_pu_bacteria 2515154134 2515742726 972
196 iso_pu_bacteria 2516653077 2517042486 972
197 iso_pu_bacteria 2516653085 2517081320 972
198 iso_pu_bacteria 2534681796 2535521070 972
199 iso_pu_bacteria 2585427526 2585526409 972
200 iso_pu_bacteria 2585427528 2585538966 972
201 iso_pu_bacteria 2585427593 2585836916 972
202 iso_pu_bacteria 2738541333 2739034385 972
203 iso_pu_bacteria 2765235942 2766068140 972
204 iso_pu_bacteria 2791355263 2793340526 972
205 iso_pu_bacteria 2791355266 2793363183 972
206 iso_pu_bacteria 2802429633 2806043185 972
207 iso_pu_bacteria 2802429634 2806051137 972
208 iso_pu_bacteria 2802429635 2806057691 972
209 iso_pu_bacteria 2802429636 2806065591 972
210 iso_pu_bacteria 2802429637 2806075179 972
211 iso_pu_bacteria 2838680041 2838686353 972
212 iso_pu_bacteria 2838686498 2838688339 972
213 iso_pu_bacteria 2838694306 2838700771 972
214 iso_pu_bacteria 2838707686 2838714070 972
215 iso_pu_bacteria 2838729681 2838734526 972
216 iso_pu_bacteria 2838742623 2838746985 972
217 iso_pu_bacteria 2841851746 2841852080 972
218 iso_pu_bacteria 2842077413 2842083460 972
219 iso_pu_bacteria 2842110456 2842111818 972
220 iso_pu_bacteria 2842118031 2842124421 972
221 iso_pu_bacteria 2842156927 2842158845 972
222 iso_pu_bacteria 2842163707 2842166278 972
223 iso_pu_bacteria 2842180545 2842182459 972
224 iso_pu_bacteria 2842217011 2842222391 972
225 iso_pu_bacteria 2842229732 2842234528 972
226 iso_pu_bacteria 2842237096 2842243483 972
227 iso_pu_bacteria 2842243621 2842248261 972
228 iso_pu_bacteria 2842257432 2842262566 972
229 iso_pu_bacteria 2842271015 2842272711 972
230 iso_pu_bacteria 2842291075 2842297640 972
231 iso_pu_bacteria 2842304105 2842307845 972
232 iso_pu_bacteria 2842370503 2842376912 972
233 iso_pu_bacteria 2842377471 2842384059 972
234 iso_pu_bacteria 2842384541 2842391193 972
235 iso_pu_bacteria 2844454524 2844461609 972
236 iso_pu_bacteria 2933570622 2933574296 972
237 iso_pu_bacteria 2933586486 2933591024 972
238 iso_pu_bacteria 2935894831 2935901101 972
239 iso_pu_bacteria 2935901341 2935907960 972
240 iso_pu_bacteria 2936381700 2936382704 972
241 iso_pu_bacteria 639633055 639650879 972
242 iso_pu_bacteria 8005307578 8005311918 972
243 iso_pu_bacteria 8005542996 8005550009 972
244 iso_pu_bacteria 8005556819 8005563132 972
245 iso_pu_bacteria 8005563573 8005564690 972
246 iso_pu_bacteria 8005570704 8005576041 972
247 iso_pu_bacteria 8018163183 8018169904 972
248 iso_pu_bacteria 8023680758 8023685910 972
249 iso_pu_bacteria 8024479707 8024485232 972
250 iso_pu_bacteria 2513237093 2513633439 973
251 iso_pu_bacteria 2582581866 2585393672 973
252 iso_pu_bacteria 2599185302 2599946058 973
253 iso_pu_bacteria 2599185304 2599957121 973
254 iso_pu_bacteria 2599185309 2599986104 973
255 iso_pu_bacteria 2599185310 2599991939 973
256 iso_pu_bacteria 2599185312 2600002790 973
257 iso_pu_bacteria 2599185320 2600050394 973
258 iso_pu_bacteria 2615840698 2616555377 973
259 iso_pu_bacteria 2808606361 2808858702 973
260 iso_pu_bacteria 2808606376 2808927142 973
261 iso_pu_bacteria 2808606378 2808938839 973
262 iso_pu_bacteria 2808606380 2808949261 973
263 iso_pu_bacteria 2808606383 2808967230 973
264 iso_pu_bacteria 2808606389 2809002041 973
265 iso_pu_bacteria 2913036834 2913040090 973
266 iso_pu_bacteria 2988728565 2988729320 973
267 iso_pu_bacteria 3005416602 3005416620 973
268 iso_pu_bacteria 8005314921 8005320737 973
269 iso_pu_bacteria 8057874678 8057876144 973
270 3300015262 Ga0182007_10001289 Ga0182007_100012894 974
271 3300015265 Ga0182005_1000995 Ga0182005_10009956 974
272 3300037471 Ga0395905_0023949 Ga0395905_0023949_512_3625 974
273 3300053119 Ga0500595_003252 Ga0500595_003252_1133_4201 974
274 iso_pu_bacteria 2509276021 2509390856 974
275 iso_pu_bacteria 2509276033 2509441970 974
276 iso_pu_bacteria 2524023209 2524459865 974
277 iso_pu_bacteria 2529292951 2530648820 974
278 iso_pu_bacteria 2585427590 2585823828 974
279 iso_pu_bacteria 2690316117 2692316343 974
280 iso_pu_bacteria 2718217927 2719389778 974
281 iso_pu_bacteria 2718217997 2719669349 974
282 iso_pu_bacteria 2718218199 2720494365 974
283 iso_pu_bacteria 2718218232 2720610690 974
284 iso_pu_bacteria 2718218233 2720616568 974
285 iso_pu_bacteria 2718218235 2720627924 974
286 iso_pu_bacteria 2718218269 2720771504 974
287 iso_pu_bacteria 2718218423 2721403421 974
288 iso_pu_bacteria 2721755556 2723030763 974
289 iso_pu_bacteria 2721755684 2723563264 974
290 iso_pu_bacteria 2721755685 2723571258 974
291 iso_pu_bacteria 2721755809 2724034997 974
292 iso_pu_bacteria 2721755819 2724087053 974
293 iso_pu_bacteria 2721755822 2724100764 974
294 iso_pu_bacteria 2721755823 2724108018 974
295 iso_pu_bacteria 2728369352 2730105229 974
296 iso_pu_bacteria 2791355256 2793296018 974
297 iso_pu_bacteria 2791355259 2793312694 974
298 iso_pu_bacteria 2791355261 2793326714 974
299 iso_pu_bacteria 2791355262 2793336398 974
300 iso_pu_bacteria 2791355267 2793367439 974
301 iso_pu_bacteria 2802429605 2805931326 974
302 iso_pu_bacteria 2838016132 2838019758 974
303 iso_pu_bacteria 2838061910 2838067081 974
304 iso_pu_bacteria 2838068647 2838072617 974
305 iso_pu_bacteria 2838661181 2838665514 974
306 iso_pu_bacteria 2838668709 2838669187 974
307 iso_pu_bacteria 2838701080 2838701152 974
308 iso_pu_bacteria 2841864319 2841865830 974
309 iso_pu_bacteria 2842146304 2842146783 974
310 iso_pu_bacteria 2842205361 2842208702 974
311 iso_pu_bacteria 2842250916 2842250987 974
312 iso_pu_bacteria 2842278818 2842281953 974
313 iso_pu_bacteria 2842298080 2842301531 974
314 iso_pu_bacteria 2842311132 2842313322 974
315 iso_pu_bacteria 2842317721 2842323111 974
316 iso_pu_bacteria 2842341865 2842347810 974
317 iso_pu_bacteria 2842357229 2842360630 974
318 iso_pu_bacteria 2842363717 2842364073 974
319 iso_pu_bacteria 2842422224 2842426285 974
320 iso_pu_bacteria 2842428310 2842430074 974
321 iso_pu_bacteria 2842441272 2842442685 974
322 iso_pu_bacteria 2842447887 2842453518 974
323 iso_pu_bacteria 2842462802 2842464561 974
324 iso_pu_bacteria 2842469257 2842471071 974
325 iso_pu_bacteria 2842489311 2842490589 974
326 iso_pu_bacteria 2842495871 2842499008 974
327 iso_pu_bacteria 2847417321 2847418590 974
328 iso_pu_bacteria 2848992105 2848993568 974
329 iso_pu_bacteria 2855872281 2855873804 974
330 iso_pu_bacteria 2919481497 2919485113 974
331 iso_pu_bacteria 8005275841 8005275900 974
332 iso_pu_bacteria 8005282627 8005287439 974
333 iso_pu_bacteria 8005289223 8005289827 974
334 iso_pu_bacteria 8005382845 8005389191 974
335 iso_pu_bacteria 8005395548 8005396717 974
336 iso_pu_bacteria 8005430974 8005435839 974
337 iso_pu_bacteria 8005497431 8005503588 974
338 iso_pu_bacteria 8005619151 8005625894 974
339 iso_pu_bacteria 8005626139 8005632138 974
340 iso_pu_bacteria 8005668836 8005675466 974
341 iso_pu_bacteria 8005695170 8005695211 974
342 iso_pu_bacteria 8018176218 8018180790 974
343 iso_pu_bacteria 8024501048 8024506865 974
344 iso_pu_bacteria 8056375014 8056381750 974
345 iso_pu_bacteria 2582581307 2585271711 975
346 iso_pu_bacteria 2585427531 2585563049 975
347 iso_pu_bacteria 2585427609 2585907265 975
348 iso_pu_bacteria 2585428125 2587982741 975
349 iso_pu_bacteria 2837678835 2837682360 975
350 iso_pu_bacteria 2842509118 2842513395 975
351 iso_pu_bacteria 8024486573 8024486799 975
352 3300046460 Ga0495638_0000983 Ga0495638_0000983_12818_15901 976
353 3300053153 Ga0500616_0003258 Ga0500616_0003258_7174_10320 976
354 3300046665 Ga0495661_0005117 Ga0495661_0005117_5748_8888 979
355 3300046471 Ga0495650_0000946 Ga0495650_0000946_17095_20229 982
356 3300046660 Ga0495625_0000176 Ga0495625_0000176_13909_17043 982
357 3300002737 JGI25162J39368_1000025 JGI25162J39368_10000256 984
358 3300002737 JGI25162J39368_1000263 JGI25162J39368_10002636 984
359 3300003214 JGI25165J46597_1000054 JGI25165J46597_10000546 984
360 3300003751 Ga0055538_1000026 Ga0055538_1000026220 984
361 3300003752 Ga0055539_1000033 Ga0055539_1000033220 984
362 3300003756 Ga0055533_1000044 Ga0055533_1000044220 984
363 3300003759 Ga0055525_1000052 Ga0055525_1000052220 984
364 3300003841 Ga0055541_1000069 Ga0055541_100006987 984
365 3300025224 Ga0209784_100020 Ga0209784_10002070 984
366 3300025225 Ga0209566_100020 Ga0209566_10002070 984
367 3300025226 Ga0209674_100035 Ga0209674_10003570 984
368 3300025230 Ga0209563_100038 Ga0209563_10003870 984
369 3300025231 Ga0207427_101379 Ga0207427_1013796 984
370 3300025233 Ga0209437_100066 Ga0209437_100066311 984
371 3300025253 Ga0209677_100031 Ga0209677_10003110 984
372 3300025261 Ga0209233_1000060 Ga0209233_100006070 984
373 3300046462 Ga0495651_0010259 Ga0495651_0010259_545_3613 984
374 3300046516 Ga0495628_0010495 Ga0495628_0010495_1526_4594 984
375 3300046529 Ga0495652_0019178 Ga0495652_0019178_440_3508 984

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00873

ACR_tran

AcrB/AcrD/AcrF family

1

999

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rr6-assembly1.cif.gz_C multidrug efflux pump subunit acrb 0.8951 4 955
7rr8-assembly1.cif.gz_C multidrug efflux pump subunit acrb 0.8941 4 956
7wls-assembly1.cif.gz_C crystal structure of the multidrug efflux transporter bpeb from burkholderia pseudomallei 0.891 4 956
7rr7-assembly1.cif.gz_C multidrug efflux pump subunit acrb 0.8905 8 956
4u8y-assembly1.cif.gz_C coupling of remote alternating-access transport mechanisms for protons and substrates in the multidrug efflux pump acrb 0.8897 4 955
ID Description Score Start End Superfamily
af_P38054_46_113_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9691 46 110 3.30.70.1430
af_P24181_868_1032_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9628 797 955 1.20.1640.10
3w9iC05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9623 804 954 1.20.1640.10
3d9bA05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9598 804 955 1.20.1640.10
3w9iD05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9562 804 955 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A659YHH1-F1-model_v4 deleted 0.9758 793 942
AF-A0A659YHH1-F1-model_v4 deleted 0.9632 793 942
AF-A0A4Q3TJG7-F1-model_v4 Efflux RND transporter permease subunit 0.9616 486 943 GO:0005886
GO:0042910
AF-A0A800EZE7-F1-model_v4 Efflux RND transporter permease subunit 0.9544 6 129 GO:0005886
GO:0042910
AF-A0A7Y7J013-F1-model_v4 Efflux RND transporter permease subunit 0.9533 756 964 GO:0005886
GO:0042910

Feature Viewer

pLDDT pTM Quality
82.18 0.75 High
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Predicted Structure (AlphaFold2)

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