F426266

General Info

Members Datasets Scaffolds Average Seq Length
373 186 746 192

Family's Representative Sequence

Representative Sequence 3300005438|Ga0070701_10041862|Ga0070701_100418623
Length 235
Sequence MVGAAVCPNAGATGSSNDRAITKRNIRSLRFDACEYTQVRLFVAVEIGETLARRAAHVTAELERRATAAAKRAKVTWIPADRMHLTIRFIGEVDDDQASMVREVLDDPLAVRPFSLTLCGAGTFPKSGTPRVVWLGVTHGREQLLQVEREITARLTPLGIPEEDRAYSPHLTVARVRDPAGLKSARLLDGLTDHRIGTAHIDAITLFQSKLSPKGPTYTPLLHTRLGRVEDPPLH

Samples

Sample ID Description Type Environment
1 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
39 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
40 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
41 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
49 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
55 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
56 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
57 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
60 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
63 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
64 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
65 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
66 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
67 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
68 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
69 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
77 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
84 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
85 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
86 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
87 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
88 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
128 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
129 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
133 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
134 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
135 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
136 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
139 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
140 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
141 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
142 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
145 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
146 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
149 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
150 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
151 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
154 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
155 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
156 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
157 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
158 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
159 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
160 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
161 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
170 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
175 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
176 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
179 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.54
Rhizosphere 99.46
Stem 0
Stem Tuber 0
Unclassified 15.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070701_10041862 3300005438 Bacteria 2336
2 SwRhRL2b_contig_3320579 2162886007 Unclassified 848
3 MBSR1b_contig_3667774 2162886012 Bacteria 1186
4 MBSR1b_contig_7036897 2162886012 Bacteria 1186
5 Ga0065704_10004052 3300005289 Bacteria 4085
6 Ga0065712_10208085 3300005290 Bacteria 1083
7 Ga0065715_10096794 3300005293 Bacteria 3818
8 Ga0065715_10268275 3300005293 Bacteria 1118
9 Ga0065707_10085979 3300005295 Bacteria 5747
10 Ga0065707_10176156 3300005295 Bacteria 1449
11 Ga0065707_10183442 3300005295 Bacteria 1395
12 Ga0065707_10280058 3300005295 Bacteria 1050
13 Ga0065707_10396357 3300005295 Archaea 858
14 Ga0070690_100007216 3300005330 Bacteria 6357
15 Ga0070690_100044587 3300005330 Bacteria 2815
16 Ga0070670_100007370 3300005331 Bacteria 9341
17 Ga0070670_100032712 3300005331 Bacteria 4480
18 Ga0070677_10004547 3300005333 Bacteria 4530
19 Ga0068869_100147594 3300005334 Bacteria 1821
20 Ga0068869_100187437 3300005334 Unclassified 1625
21 Ga0068869_100325721 3300005334 Bacteria 1247
22 Ga0070666_10013571 3300005335 Bacteria 5173
23 Ga0070666_10350122 3300005335 Bacteria 1057
24 Ga0070680_100225512 3300005336 Unclassified 1582
25 Ga0068868_100190857 3300005338 Bacteria 1704
26 Ga0068868_100659667 3300005338 Bacteria 932
27 Ga0070689_100026427 3300005340 Bacteria 4371
28 Ga0070689_100031198 3300005340 Bacteria 4049
29 Ga0070689_100049683 3300005340 Bacteria 3239
30 Ga0070689_100516383 3300005340 Bacteria 1025
31 Ga0070687_100003411 3300005343 Bacteria 6172
32 Ga0070687_100272406 3300005343 Bacteria 1062
33 Ga0070661_100029369 3300005344 Bacteria 3968
34 Ga0070661_101034549 3300005344 Bacteria 682
35 Ga0070692_10024641 3300005345 Bacteria 2959
36 Ga0070668_100082174 3300005347 Unclassified 2527
37 Ga0070668_100543950 3300005347 Unclassified 1010
38 Ga0070669_100002455 3300005353 Bacteria 13419
39 Ga0070669_100092121 3300005353 Bacteria 2274
40 Ga0070669_100272441 3300005353 Bacteria 1354
41 Ga0070669_100771366 3300005353 Bacteria 816
42 Ga0070675_100000506 3300005354 Bacteria 26681
43 Ga0070675_100010755 3300005354 Bacteria 7158
44 Ga0070675_100022838 3300005354 Bacteria 4998
45 Ga0070675_100028420 3300005354 Bacteria 4501
46 Ga0070675_100053406 3300005354 Bacteria 3323
47 Ga0070675_100060045 3300005354 Bacteria 3139
48 Ga0070675_100623822 3300005354 Unclassified 979
49 Ga0070674_100000091 3300005356 Bacteria 41986
50 Ga0070673_100020805 3300005364 Bacteria 4740
51 Ga0070673_100037357 3300005364 Unclassified 3700
52 Ga0070673_100090662 3300005364 Bacteria 2497
53 Ga0070673_100093696 3300005364 Bacteria 2460
54 Ga0070673_100122178 3300005364 Bacteria 2174
55 Ga0070673_100293910 3300005364 Bacteria 1428
56 Ga0070673_100462876 3300005364 Bacteria 1142
57 Ga0070688_100069813 3300005365 Bacteria 2245
58 Ga0070688_100260995 3300005365 Bacteria 1237
59 Ga0070659_100420635 3300005366 Bacteria 1130
60 Ga0070667_100029050 3300005367 Bacteria 4605
61 Ga0070713_100021116 3300005436 Bacteria 5002
62 Ga0070701_10042407 3300005438 Bacteria 2322
63 Ga0070705_100227342 3300005440 Bacteria 1296
64 Ga0070705_100699631 3300005440 Unclassified 796
65 Ga0070700_100170004 3300005441 Bacteria 1509
66 Ga0070700_100309742 3300005441 Bacteria 1156
67 Ga0070694_100042573 3300005444 Bacteria 3034
68 Ga0070694_101250063 3300005444 Unclassified 623
69 Ga0070663_100317911 3300005455 Bacteria 1251
70 Ga0070678_100067812 3300005456 Bacteria 2657
71 Ga0070678_100224544 3300005456 Bacteria 1563
72 Ga0070662_100012470 3300005457 Bacteria 5637
73 Ga0070662_100039415 3300005457 Bacteria 3360
74 Ga0070681_10001417 3300005458 Bacteria 21068
75 Ga0070681_10675787 3300005458 Bacteria 948
76 Ga0068867_100000979 3300005459 Bacteria 19516
77 Ga0068867_100043250 3300005459 Bacteria 3298
78 Ga0070685_10000869 3300005466 Bacteria 16396
79 Ga0070685_10074191 3300005466 Bacteria 2024
80 Ga0070707_100072462 3300005468 Bacteria 3320
81 Ga0070698_100034473 3300005471 Bacteria 5238
82 Ga0070699_100002056 3300005518 Bacteria 18203
83 Ga0070699_100058759 3300005518 Bacteria 3332
84 Ga0070699_100060960 3300005518 Bacteria 3269
85 Ga0070684_100026687 3300005535 Bacteria 4868
86 Ga0070697_100098879 3300005536 Unclassified 2421
87 Ga0070672_100008803 3300005543 Bacteria 6930
88 Ga0070672_100012849 3300005543 Bacteria 5897
89 Ga0070672_100097117 3300005543 Bacteria 2385
90 Ga0070672_100107421 3300005543 Bacteria 2271
91 Ga0070672_100200210 3300005543 Bacteria 1670
92 Ga0070686_100127671 3300005544 Bacteria 1754
93 Ga0070686_100739244 3300005544 Unclassified 788
94 Ga0070665_100011392 3300005548 Bacteria 8990
95 Ga0070704_100006989 3300005549 Bacteria 6693
96 Ga0070704_100162023 3300005549 Bacteria 1770
97 Ga0070664_100005787 3300005564 Bacteria 9974
98 Ga0070664_100027040 3300005564 Bacteria 4765
99 Ga0070664_100109650 3300005564 Bacteria 2408
100 Ga0068857_100007963 3300005577 Bacteria 9148
101 Ga0068857_100206860 3300005577 Bacteria 1790
102 Ga0068854_100179106 3300005578 Bacteria 1655
103 Ga0070702_100408652 3300005615 Unclassified 973
104 Ga0068852_100083795 3300005616 Bacteria 2836
105 Ga0068859_100006743 3300005617 Bacteria 11668
106 Ga0068859_100006981 3300005617 Bacteria 11465
107 Ga0068864_100118843 3300005618 Bacteria 2361
108 Ga0068864_100174622 3300005618 Bacteria 1961
109 Ga0068864_100661938 3300005618 Bacteria 1017
110 Ga0068861_100009593 3300005719 Bacteria 6688
111 Ga0068861_100010585 3300005719 Bacteria 6405
112 Ga0068861_100173051 3300005719 Bacteria 1791
113 Ga0068861_100260199 3300005719 Unclassified 1485
114 Ga0068861_100416610 3300005719 Bacteria 1196
115 Ga0068870_10000888 3300005840 Bacteria 11670
116 Ga0068870_10002401 3300005840 Bacteria 7795
117 Ga0068870_10002743 3300005840 Bacteria 7395
118 Ga0068870_10037773 3300005840 Bacteria 2490
119 Ga0068863_100003445 3300005841 Bacteria 15598
120 Ga0068858_100160362 3300005842 Bacteria 2117
121 Ga0068860_100004299 3300005843 Bacteria 14559
122 Ga0068860_100026410 3300005843 Bacteria 5598
123 Ga0068862_100050455 3300005844 Bacteria 3556
124 Ga0068862_100070340 3300005844 Unclassified 3021
125 Ga0068862_100312241 3300005844 Bacteria 1449
126 Ga0068862_100659344 3300005844 Bacteria 1010
127 Ga0068862_100746104 3300005844 Archaea 952
128 Ga0081539_10000090 3300005985 Bacteria 212006
129 Ga0081539_10000649 3300005985 Bacteria 69909
130 Ga0081539_10005300 3300005985 Bacteria 13268
131 Ga0097621_100182535 3300006237 Unclassified 1813
132 Ga0068871_100107176 3300006358 Bacteria 2347
133 Ga0068871_100388700 3300006358 Unclassified 1240
134 Ga0075428_100014744 3300006844 Bacteria 8682
135 Ga0075428_100108270 3300006844 Bacteria 3029
136 Ga0075428_100236556 3300006844 Bacteria 1971
137 Ga0075428_100998423 3300006844 Unclassified 886
138 Ga0075430_100020757 3300006846 Bacteria 5586
139 Ga0075431_100021989 3300006847 Bacteria 6521
140 Ga0075431_100025288 3300006847 Bacteria 6087
141 Ga0075431_100190959 3300006847 Bacteria 2098
142 Ga0075431_101113236 3300006847 Unclassified 754
143 Ga0075433_10011120 3300006852 Bacteria 7238
144 Ga0075433_10878376 3300006852 Unclassified 782
145 Ga0075434_100041795 3300006871 Bacteria 4543
146 Ga0075434_100083135 3300006871 Bacteria 3199
147 Ga0075429_100034893 3300006880 Bacteria 4372
148 Ga0075429_100166812 3300006880 Bacteria 1929
149 Ga0075429_100204789 3300006880 Bacteria 1729
150 Ga0068865_100080538 3300006881 Bacteria 2336
151 Ga0068865_100109722 3300006881 Unclassified 2034
152 Ga0097620_100006743 3300006931 Bacteria 11668
153 Ga0097620_100006982 3300006931 Bacteria 11465
154 Ga0111539_10001278 3300009094 Bacteria 33608
155 Ga0111539_10007638 3300009094 Bacteria 13818
156 Ga0111539_10025853 3300009094 Bacteria 7188
157 Ga0111539_10030402 3300009094 Bacteria 6564
158 Ga0111539_10046313 3300009094 Bacteria 5202
159 Ga0111539_10061211 3300009094 Bacteria 4460
160 Ga0111539_10234393 3300009094 Bacteria 2137
161 Ga0111539_10255161 3300009094 Bacteria 2042
162 Ga0111539_10394888 3300009094 Bacteria 1611
163 Ga0111539_10467341 3300009094 Bacteria 1469
164 Ga0111539_10794884 3300009094 Unclassified 1101
165 Ga0111539_10814618 3300009094 Unclassified 1086
166 Ga0105245_10909730 3300009098 Unclassified 922
167 Ga0114129_10005465 3300009147 Bacteria 17963
168 Ga0114129_10024193 3300009147 Bacteria 8608
169 Ga0114129_10375774 3300009147 Bacteria 1878
170 Ga0114129_10520640 3300009147 Bacteria 1550
171 Ga0114129_10642521 3300009147 Bacteria 1370
172 Ga0114129_11376002 3300009147 Bacteria 872
173 Ga0105243_10466346 3300009148 Bacteria 1189
174 Ga0105248_10181485 3300009177 Bacteria 2372
175 Ga0105249_10004904 3300009553 Bacteria 11547
176 Ga0105246_10381041 3300011119 Bacteria 1165
177 Ga0157374_10284171 3300013296 Bacteria 1634
178 Ga0157378_10253610 3300013297 Bacteria 1685
179 Ga0163162_10003262 3300013306 Bacteria 15526
180 Ga0163162_10575806 3300013306 Bacteria 1253
181 Ga0157375_10010715 3300013308 Bacteria 8076
182 Ga0157375_10126943 3300013308 Bacteria 2667
183 Ga0157375_10330101 3300013308 Bacteria 1690
184 Ga0163163_10455182 3300014325 Bacteria 1340
185 Ga0157380_10001120 3300014326 Bacteria 17286
186 Ga0157380_10024149 3300014326 Bacteria 4596
187 Ga0157380_10212680 3300014326 Bacteria 1724
188 Ga0157380_10466106 3300014326 Bacteria 1217
189 Ga0157380_11494226 3300014326 Bacteria 728
190 Ga0157377_10025812 3300014745 Bacteria 3138
191 Ga0157377_10027758 3300014745 Bacteria 3042
192 Ga0157377_10128949 3300014745 Bacteria 1542
193 Ga0157379_10188491 3300014968 Bacteria 1864
194 Ga0157376_10108052 3300014969 Unclassified 2443
195 Ga0163161_10048165 3300017792 Bacteria 3078
196 Ga0207673_1020374 3300025290 Unclassified 894
197 Ga0207697_10014853 3300025315 Unclassified 3225
198 Ga0207697_10062560 3300025315 Bacteria 1550
199 Ga0207682_10000741 3300025893 Bacteria 15101
200 Ga0207682_10227829 3300025893 Unclassified 863
201 Ga0207688_10002138 3300025901 Bacteria 10620
202 Ga0207688_10118985 3300025901 Unclassified 1540
203 Ga0207680_10088628 3300025903 Bacteria 1962
204 Ga0207680_10202846 3300025903 Bacteria 1352
205 Ga0207645_10186315 3300025907 Bacteria 1363
206 Ga0207643_10000684 3300025908 Bacteria 21175
207 Ga0207643_10004468 3300025908 Bacteria 7517
208 Ga0207643_10005485 3300025908 Bacteria 6782
209 Ga0207643_10006414 3300025908 Bacteria 6300
210 Ga0207643_10029131 3300025908 Bacteria 3071
211 Ga0207684_10093521 3300025910 Bacteria 2564
212 Ga0207707_10415967 3300025912 Bacteria 1153
213 Ga0207660_10238315 3300025917 Bacteria 1432
214 Ga0207662_10007058 3300025918 Bacteria 6101
215 Ga0207649_10097740 3300025920 Bacteria 1937
216 Ga0207646_10139386 3300025922 Bacteria 2184
217 Ga0207681_10012151 3300025923 Bacteria 5307
218 Ga0207681_10086920 3300025923 Bacteria 2223
219 Ga0207681_10190322 3300025923 Bacteria 1569
220 Ga0207681_10300717 3300025923 Unclassified 1269
221 Ga0207650_10021677 3300025925 Bacteria 4541
222 Ga0207650_10078876 3300025925 Bacteria 2492
223 Ga0207659_10009832 3300025926 Bacteria 5989
224 Ga0207659_10026681 3300025926 Bacteria 3901
225 Ga0207659_10047987 3300025926 Bacteria 3023
226 Ga0207659_10057220 3300025926 Bacteria 2795
227 Ga0207659_10070792 3300025926 Bacteria 2544
228 Ga0207659_10080947 3300025926 Bacteria 2400
229 Ga0207700_10262971 3300025928 Bacteria 1478
230 Ga0207690_10194929 3300025932 Bacteria 1535
231 Ga0207706_10044801 3300025933 Bacteria 3920
232 Ga0207706_10055046 3300025933 Bacteria 3510
233 Ga0207706_10180819 3300025933 Unclassified 1852
234 Ga0207670_10014162 3300025936 Bacteria 4725
235 Ga0207669_10001185 3300025937 Bacteria 11070
236 Ga0207669_10190020 3300025937 Archaea 1481
237 Ga0207691_10009761 3300025940 Bacteria 9214
238 Ga0207691_10013336 3300025940 Bacteria 7871
239 Ga0207691_10037975 3300025940 Bacteria 4457
240 Ga0207691_10262565 3300025940 Bacteria 1488
241 Ga0207711_10630086 3300025941 Unclassified 1000
242 Ga0207689_10000508 3300025942 Bacteria 36815
243 Ga0207689_10018201 3300025942 Bacteria 5930
244 Ga0207689_10305953 3300025942 Bacteria 1318
245 Ga0207661_10022537 3300025944 Unclassified 4746
246 Ga0207679_10013399 3300025945 Bacteria 5375
247 Ga0207679_10024037 3300025945 Bacteria 4174
248 Ga0207679_10084379 3300025945 Bacteria 2437
249 Ga0207651_10011513 3300025960 Bacteria 4956
250 Ga0207651_10035108 3300025960 Bacteria 3256
251 Ga0207651_10045023 3300025960 Bacteria 2957
252 Ga0207651_10139530 3300025960 Unclassified 1870
253 Ga0207651_10157454 3300025960 Bacteria 1776
254 Ga0207651_10228444 3300025960 Bacteria 1509
255 Ga0207668_10036511 3300025972 Bacteria 3280
256 Ga0207668_10040218 3300025972 Bacteria 3153
257 Ga0207658_10194705 3300025986 Bacteria 1688
258 Ga0207677_10008279 3300026023 Bacteria 5795
259 Ga0207703_10008939 3300026035 Bacteria 7890
260 Ga0207703_10375008 3300026035 Bacteria 1315
261 Ga0207708_10004710 3300026075 Bacteria 10032
262 Ga0207708_10006585 3300026075 Bacteria 8598
263 Ga0207641_10181925 3300026088 Bacteria 1926
264 Ga0207641_11339501 3300026088 Unclassified 717
265 Ga0207648_10002071 3300026089 Bacteria 21870
266 Ga0207648_10080532 3300026089 Unclassified 2841
267 Ga0207648_10510274 3300026089 Bacteria 1101
268 Ga0207676_10401628 3300026095 Bacteria 1281
269 Ga0207674_10025336 3300026116 Bacteria 6327
270 Ga0207674_10220218 3300026116 Bacteria 1846
271 Ga0207675_100004869 3300026118 Bacteria 12940
272 Ga0207675_100131341 3300026118 Unclassified 2375
273 Ga0207675_100424405 3300026118 Unclassified 1314
274 Ga0207675_100602805 3300026118 Bacteria 1101
275 Ga0207683_10022018 3300026121 Bacteria 5468
276 Ga0207683_10032068 3300026121 Bacteria 4563
277 Ga0207683_10034743 3300026121 Bacteria 4383
278 Ga0207683_10051345 3300026121 Bacteria 3613
279 Ga0207683_10237361 3300026121 Bacteria 1663
280 Ga0207683_10413683 3300026121 Bacteria 1241
281 Ga0207698_10355008 3300026142 Bacteria 1386
282 Ga0210002_1012187 3300027617 Bacteria 1333
283 Ga0209971_1071138 3300027682 Unclassified 844
284 Ga0207428_10001378 3300027907 Bacteria 25730
285 Ga0207428_10008023 3300027907 Bacteria 9582
286 Ga0207428_10109102 3300027907 Bacteria 2131
287 Ga0207428_10293242 3300027907 Bacteria 1205
288 Ga0207428_10487687 3300027907 Unclassified 896
289 Ga0268265_10003091 3300028380 Bacteria 12145
290 Ga0268265_10089155 3300028380 Bacteria 2459
291 Ga0268265_10164692 3300028380 Unclassified 1888
292 Ga0268265_10333161 3300028380 Bacteria 1379
293 Ga0268265_10551635 3300028380 Archaea 1094
294 Ga0268264_10012414 3300028381 Bacteria 7013
295 Ga0268264_10045921 3300028381 Bacteria 3628
296 Ga0268264_10056428 3300028381 Bacteria 3284
297 Ga0307407_10346444 3300031903 Bacteria 1051
298 Ga0373949_0043412 3300035090 Unclassified 1112
299 Ga0373951_0076274 3300035091 Unclassified 861
300 Ga0373954_0178175 3300035118 Bacteria 1042
301 Ga0373960_0023111 3300035121 Bacteria 1672
302 Ga0373924_0036134 3300035410 Bacteria 2006
303 Ga0373937_0041002 3300036401 Bacteria 4222
304 Ga0373925_0118263 3300037068 Bacteria 2055
305 Ga0439435_0022849 3300042436 Bacteria 1636
306 Ga0439464_0024672 3300042439 Bacteria 1663
307 Ga0450916_004513 3300042530 Bacteria 1574
308 Ga0439440_0061192 3300042993 Bacteria 962
309 Ga0451576_0013078 3300045051 Bacteria 9294
310 Ga0451576_0060881 3300045051 Bacteria 3937
311 Ga0451576_0441328 3300045051 Unclassified 1366
312 Ga0495641_0253463 3300046461 Unclassified 791
313 Ga0495582_0104453 3300046473 Bacteria 1588
314 Ga0495594_0029701 3300046499 Bacteria 2956
315 Ga0495594_0044743 3300046499 Bacteria 2429
316 Ga0495594_0267875 3300046499 Unclassified 973
317 Ga0495628_0427948 3300046516 Bacteria 964
318 Ga0495642_0228463 3300046528 Unclassified 813
319 Ga0495665_0085758 3300046531 Bacteria 1655
320 Ga0495598_0031247 3300046537 Unclassified 1497
321 Ga0495621_0004988 3300046539 Bacteria 3781
322 Ga0495645_0399662 3300046543 Bacteria 876
323 Ga0495656_0016082 3300046615 Unclassified 2835
324 Ga0495656_0391428 3300046615 Unclassified 726
325 Ga0495659_0001035 3300046664 Bacteria 9719
326 Ga0495659_0171248 3300046664 Bacteria 881
327 Ga0495588_0038192 3300046674 Bacteria 2442
328 Ga0495647_0086298 3300046681 Bacteria 1280
329 Ga0495669_0009134 3300046684 Bacteria 4178
330 Ga0495636_0028258 3300047318 Bacteria 2287
331 Ga0495676_0072392 3300047321 Bacteria 2647
332 Ga0495684_0262001 3300047471 Bacteria 1254
333 Ga0495593_0222232 3300047673 Unclassified 948
334 Ga0496109_0456730 3300048912 Archaea 1206
335 Ga0496111_0521128 3300048914 Archaea 874
336 Ga0501033_0262508 3300049570 Bacteria 1222
337 Ga0501036_1177779 3300049572 Bacteria 625
338 Ga0501041_0133539 3300049577 Bacteria 1546
339 Ga0501042_0004245 3300049578 Bacteria 9123
340 Ga0501046_0040293 3300049580 Bacteria 3734
341 Ga0501068_0068665 3300049584 Bacteria 2160
342 Ga0501068_0300401 3300049584 Unclassified 1028
343 Ga0501069_0293186 3300049585 Unclassified 953
344 Ga0501071_0060824 3300049587 Unclassified 2735
345 Ga0501072_0058001 3300049588 Bacteria 3052
346 Ga0501074_0459111 3300049590 Bacteria 903
347 Ga0501075_0002761 3300049591 Bacteria 11763
348 Ga0501075_0263363 3300049591 Archaea 1314
349 Ga0501077_0161411 3300049593 Unclassified 1423
350 Ga0501079_0044024 3300049741 Bacteria 3445
351 Ga0501079_0720162 3300049741 Unclassified 785
352 Ga0501080_0094922 3300049742 Bacteria 2770
353 Ga0501081_0038823 3300049743 Bacteria 3256
354 Ga0501083_0219433 3300049744 Bacteria 1239
355 nmdc:mga05p37_23511_c1 3300050507 Bacteria 7478
356 nmdc:mga05p37_77022_c1 3300050507 Bacteria 4105
357 nmdc:mga09592_102153_c1 3300050508 Unclassified 2456
358 nmdc:mga09592_456659_c1 3300050508 Bacteria 1102
359 nmdc:mga0qj67_6195_c1 3300050509 Bacteria 8776
360 nmdc:mga06r32_205025_c1 3300050510 Bacteria 1960
361 nmdc:mga06r32_20896_c1 3300050510 Bacteria 6034
362 nmdc:mga06r32_229848_c1 3300050510 Bacteria 1843
363 nmdc:mga06r32_54747_c1 3300050510 Bacteria 3826
364 nmdc:mga08y16_10326_c1 3300050511 Bacteria 9799
365 nmdc:mga08y16_179757_c1 3300050511 Bacteria 2197
366 nmdc:mga08y16_34387_c1 3300050511 Bacteria 5323
367 nmdc:mga08y16_403827_c1 3300050511 Bacteria 1398
368 nmdc:mga08y16_491163_c1 3300050511 Bacteria 1248
369 nmdc:mga08y16_5349_c1 3300050511 Bacteria 13429
370 nmdc:mga0n895_23464_c1 3300050512 Bacteria 5798
371 nmdc:mga0n895_49366_c1 3300050512 Bacteria 4122
372 nmdc:mga0a205_5903_c1 3300050515 Bacteria 11030
373 nmdc:mga0a205_809004_c1 3300050515 Unclassified 785
374 Ga0070701_10041862
375 SwRhRL2b_contig_3320579
376 MBSR1b_contig_3667774
377 MBSR1b_contig_7036897
378 Ga0065704_10004052
379 Ga0065712_10208085
380 Ga0065715_10096794
381 Ga0065715_10268275
382 Ga0065707_10085979
383 Ga0065707_10176156
384 Ga0065707_10183442
385 Ga0065707_10280058
386 Ga0065707_10396357
387 Ga0070690_100007216
388 Ga0070690_100044587
389 Ga0070670_100007370
390 Ga0070670_100032712
391 Ga0070677_10004547
392 Ga0068869_100147594
393 Ga0068869_100187437
394 Ga0068869_100325721
395 Ga0070666_10013571
396 Ga0070666_10350122
397 Ga0070680_100225512
398 Ga0068868_100190857
399 Ga0068868_100659667
400 Ga0070689_100026427
401 Ga0070689_100031198
402 Ga0070689_100049683
403 Ga0070689_100516383
404 Ga0070687_100003411
405 Ga0070687_100272406
406 Ga0070661_100029369
407 Ga0070661_101034549
408 Ga0070692_10024641
409 Ga0070668_100082174
410 Ga0070668_100543950
411 Ga0070669_100002455
412 Ga0070669_100092121
413 Ga0070669_100272441
414 Ga0070669_100771366
415 Ga0070675_100000506
416 Ga0070675_100010755
417 Ga0070675_100022838
418 Ga0070675_100028420
419 Ga0070675_100053406
420 Ga0070675_100060045
421 Ga0070675_100623822
422 Ga0070674_100000091
423 Ga0070673_100020805
424 Ga0070673_100037357
425 Ga0070673_100090662
426 Ga0070673_100093696
427 Ga0070673_100122178
428 Ga0070673_100293910
429 Ga0070673_100462876
430 Ga0070688_100069813
431 Ga0070688_100260995
432 Ga0070659_100420635
433 Ga0070667_100029050
434 Ga0070713_100021116
435 Ga0070701_10042407
436 Ga0070705_100227342
437 Ga0070705_100699631
438 Ga0070700_100170004
439 Ga0070700_100309742
440 Ga0070694_100042573
441 Ga0070694_101250063
442 Ga0070663_100317911
443 Ga0070678_100067812
444 Ga0070678_100224544
445 Ga0070662_100012470
446 Ga0070662_100039415
447 Ga0070681_10001417
448 Ga0070681_10675787
449 Ga0068867_100000979
450 Ga0068867_100043250
451 Ga0070685_10000869
452 Ga0070685_10074191
453 Ga0070707_100072462
454 Ga0070698_100034473
455 Ga0070699_100002056
456 Ga0070699_100058759
457 Ga0070699_100060960
458 Ga0070684_100026687
459 Ga0070697_100098879
460 Ga0070672_100008803
461 Ga0070672_100012849
462 Ga0070672_100097117
463 Ga0070672_100107421
464 Ga0070672_100200210
465 Ga0070686_100127671
466 Ga0070686_100739244
467 Ga0070665_100011392
468 Ga0070704_100006989
469 Ga0070704_100162023
470 Ga0070664_100005787
471 Ga0070664_100027040
472 Ga0070664_100109650
473 Ga0068857_100007963
474 Ga0068857_100206860
475 Ga0068854_100179106
476 Ga0070702_100408652
477 Ga0068852_100083795
478 Ga0068859_100006743
479 Ga0068859_100006981
480 Ga0068864_100118843
481 Ga0068864_100174622
482 Ga0068864_100661938
483 Ga0068861_100009593
484 Ga0068861_100010585
485 Ga0068861_100173051
486 Ga0068861_100260199
487 Ga0068861_100416610
488 Ga0068870_10000888
489 Ga0068870_10002401
490 Ga0068870_10002743
491 Ga0068870_10037773
492 Ga0068863_100003445
493 Ga0068858_100160362
494 Ga0068860_100004299
495 Ga0068860_100026410
496 Ga0068862_100050455
497 Ga0068862_100070340
498 Ga0068862_100312241
499 Ga0068862_100659344
500 Ga0068862_100746104
501 Ga0081539_10000090
502 Ga0081539_10000649
503 Ga0081539_10005300
504 Ga0097621_100182535
505 Ga0068871_100107176
506 Ga0068871_100388700
507 Ga0075428_100014744
508 Ga0075428_100108270
509 Ga0075428_100236556
510 Ga0075428_100998423
511 Ga0075430_100020757
512 Ga0075431_100021989
513 Ga0075431_100025288
514 Ga0075431_100190959
515 Ga0075431_101113236
516 Ga0075433_10011120
517 Ga0075433_10878376
518 Ga0075434_100041795
519 Ga0075434_100083135
520 Ga0075429_100034893
521 Ga0075429_100166812
522 Ga0075429_100204789
523 Ga0068865_100080538
524 Ga0068865_100109722
525 Ga0097620_100006743
526 Ga0097620_100006982
527 Ga0111539_10001278
528 Ga0111539_10007638
529 Ga0111539_10025853
530 Ga0111539_10030402
531 Ga0111539_10046313
532 Ga0111539_10061211
533 Ga0111539_10234393
534 Ga0111539_10255161
535 Ga0111539_10394888
536 Ga0111539_10467341
537 Ga0111539_10794884
538 Ga0111539_10814618
539 Ga0105245_10909730
540 Ga0114129_10005465
541 Ga0114129_10024193
542 Ga0114129_10375774
543 Ga0114129_10520640
544 Ga0114129_10642521
545 Ga0114129_11376002
546 Ga0105243_10466346
547 Ga0105248_10181485
548 Ga0105249_10004904
549 Ga0105246_10381041
550 Ga0157374_10284171
551 Ga0157378_10253610
552 Ga0163162_10003262
553 Ga0163162_10575806
554 Ga0157375_10010715
555 Ga0157375_10126943
556 Ga0157375_10330101
557 Ga0163163_10455182
558 Ga0157380_10001120
559 Ga0157380_10024149
560 Ga0157380_10212680
561 Ga0157380_10466106
562 Ga0157380_11494226
563 Ga0157377_10025812
564 Ga0157377_10027758
565 Ga0157377_10128949
566 Ga0157379_10188491
567 Ga0157376_10108052
568 Ga0163161_10048165
569 Ga0207673_1020374
570 Ga0207697_10014853
571 Ga0207697_10062560
572 Ga0207682_10000741
573 Ga0207682_10227829
574 Ga0207688_10002138
575 Ga0207688_10118985
576 Ga0207680_10088628
577 Ga0207680_10202846
578 Ga0207645_10186315
579 Ga0207643_10000684
580 Ga0207643_10004468
581 Ga0207643_10005485
582 Ga0207643_10006414
583 Ga0207643_10029131
584 Ga0207684_10093521
585 Ga0207707_10415967
586 Ga0207660_10238315
587 Ga0207662_10007058
588 Ga0207649_10097740
589 Ga0207646_10139386
590 Ga0207681_10012151
591 Ga0207681_10086920
592 Ga0207681_10190322
593 Ga0207681_10300717
594 Ga0207650_10021677
595 Ga0207650_10078876
596 Ga0207659_10009832
597 Ga0207659_10026681
598 Ga0207659_10047987
599 Ga0207659_10057220
600 Ga0207659_10070792
601 Ga0207659_10080947
602 Ga0207700_10262971
603 Ga0207690_10194929
604 Ga0207706_10044801
605 Ga0207706_10055046
606 Ga0207706_10180819
607 Ga0207670_10014162
608 Ga0207669_10001185
609 Ga0207669_10190020
610 Ga0207691_10009761
611 Ga0207691_10013336
612 Ga0207691_10037975
613 Ga0207691_10262565
614 Ga0207711_10630086
615 Ga0207689_10000508
616 Ga0207689_10018201
617 Ga0207689_10305953
618 Ga0207661_10022537
619 Ga0207679_10013399
620 Ga0207679_10024037
621 Ga0207679_10084379
622 Ga0207651_10011513
623 Ga0207651_10035108
624 Ga0207651_10045023
625 Ga0207651_10139530
626 Ga0207651_10157454
627 Ga0207651_10228444
628 Ga0207668_10036511
629 Ga0207668_10040218
630 Ga0207658_10194705
631 Ga0207677_10008279
632 Ga0207703_10008939
633 Ga0207703_10375008
634 Ga0207708_10004710
635 Ga0207708_10006585
636 Ga0207641_10181925
637 Ga0207641_11339501
638 Ga0207648_10002071
639 Ga0207648_10080532
640 Ga0207648_10510274
641 Ga0207676_10401628
642 Ga0207674_10025336
643 Ga0207674_10220218
644 Ga0207675_100004869
645 Ga0207675_100131341
646 Ga0207675_100424405
647 Ga0207675_100602805
648 Ga0207683_10022018
649 Ga0207683_10032068
650 Ga0207683_10034743
651 Ga0207683_10051345
652 Ga0207683_10237361
653 Ga0207683_10413683
654 Ga0207698_10355008
655 Ga0210002_1012187
656 Ga0209971_1071138
657 Ga0207428_10001378
658 Ga0207428_10008023
659 Ga0207428_10109102
660 Ga0207428_10293242
661 Ga0207428_10487687
662 Ga0268265_10003091
663 Ga0268265_10089155
664 Ga0268265_10164692
665 Ga0268265_10333161
666 Ga0268265_10551635
667 Ga0268264_10012414
668 Ga0268264_10045921
669 Ga0268264_10056428
670 Ga0307407_10346444
671 Ga0373949_0043412
672 Ga0373951_0076274
673 Ga0373954_0178175
674 Ga0373960_0023111
675 Ga0373924_0036134
676 Ga0373937_0041002
677 Ga0373925_0118263
678 Ga0439435_0022849
679 Ga0439464_0024672
680 Ga0450916_004513
681 Ga0439440_0061192
682 Ga0451576_0013078
683 Ga0451576_0060881
684 Ga0451576_0441328
685 Ga0495641_0253463
686 Ga0495582_0104453
687 Ga0495594_0029701
688 Ga0495594_0044743
689 Ga0495594_0267875
690 Ga0495628_0427948
691 Ga0495642_0228463
692 Ga0495665_0085758
693 Ga0495598_0031247
694 Ga0495621_0004988
695 Ga0495645_0399662
696 Ga0495656_0016082
697 Ga0495656_0391428
698 Ga0495659_0001035
699 Ga0495659_0171248
700 Ga0495588_0038192
701 Ga0495647_0086298
702 Ga0495669_0009134
703 Ga0495636_0028258
704 Ga0495676_0072392
705 Ga0495684_0262001
706 Ga0495593_0222232
707 Ga0496109_0456730
708 Ga0496111_0521128
709 Ga0501033_0262508
710 Ga0501036_1177779
711 Ga0501041_0133539
712 Ga0501042_0004245
713 Ga0501046_0040293
714 Ga0501068_0068665
715 Ga0501068_0300401
716 Ga0501069_0293186
717 Ga0501071_0060824
718 Ga0501072_0058001
719 Ga0501074_0459111
720 Ga0501075_0002761
721 Ga0501075_0263363
722 Ga0501077_0161411
723 Ga0501079_0044024
724 Ga0501079_0720162
725 Ga0501080_0094922
726 Ga0501081_0038823
727 Ga0501083_0219433
728 nmdc:mga05p37_23511_c1
729 nmdc:mga05p37_77022_c1
730 nmdc:mga09592_102153_c1
731 nmdc:mga09592_456659_c1
732 nmdc:mga0qj67_6195_c1
733 nmdc:mga06r32_205025_c1
734 nmdc:mga06r32_20896_c1
735 nmdc:mga06r32_229848_c1
736 nmdc:mga06r32_54747_c1
737 nmdc:mga08y16_10326_c1
738 nmdc:mga08y16_179757_c1
739 nmdc:mga08y16_34387_c1
740 nmdc:mga08y16_403827_c1
741 nmdc:mga08y16_491163_c1
742 nmdc:mga08y16_5349_c1
743 nmdc:mga0n895_23464_c1
744 nmdc:mga0n895_49366_c1
745 nmdc:mga0a205_5903_c1
746 nmdc:mga0a205_809004_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02834

LigT_PEase

LigT like Phosphoesterase

135

218

0.93

PF02834

LigT_PEase

LigT like Phosphoesterase

47

134

0.86

PF13563

2_5_RNA_ligase2

2'-5' RNA ligase superfamily

54

212

0.81

PF10469

AKAP7_NLS

AKAP7 2'5' RNA ligase-like domain

42

226

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vgj-assembly1.cif.gz_A crystal structure of 2'-5' rna ligase from pyrococcus horikoshii 0.8565 41 229
4qak-assembly1.cif.gz_A crystal structure of phosphoesterase 0.8545 40 229
1vgj-assembly1.cif.gz_A crystal structure of 2'-5' rna ligase from pyrococcus horikoshii 0.8478 41 229
4qak-assembly2.cif.gz_B crystal structure of phosphoesterase 0.847 40 229
5ldi-assembly4.cif.gz_D crystal structure of e.coli ligt in apo form 0.8468 39 229
ID Description Score Start End Superfamily
af_Q58963_1_173_3.90.1140.10 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8749 41 224 3.90.1140.10
af_Q58963_1_173_3.90.1140.10 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8606 41 224 3.90.1140.10
1vgjA00 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8535 41 229 3.90.1140.10
1vgjA00 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8492 41 229 3.90.1140.10
5ldmB00 Alpha Beta;Alpha-Beta Complex;Cyclic Phosphodiesterase; Chain: A,;Cyclic phosphodiesterase 0.8455 39 229 3.90.1140.10
ID Description Score Start End GO Terms
AF-A0A7C2HBZ6-F1-model_v4 deleted 0.9428 115 227
AF-M5PR25-F1-model_v4 RNA 2',3'-cyclic phosphodiesterase (RNA 2',3'-CPDase) (EC 3.1.4.58) 0.9417 41 228 GO:0004113
GO:0008664
GO:0016874
AF-A8MDT9-F1-model_v4 RNA 2',3'-cyclic phosphodiesterase (RNA 2',3'-CPDase) (EC 3.1.4.58) 0.9384 40 228 GO:0004113
GO:0008664
GO:0016874
AF-A0A2V8B118-F1-model_v4 RNA 2',3'-cyclic phosphodiesterase (RNA 2',3'-CPDase) (EC 3.1.4.58) 0.9338 41 229 GO:0004113
GO:0008664
AF-A0A662I7B1-F1-model_v4 RNA 2',3'-cyclic phosphodiesterase (RNA 2',3'-CPDase) (EC 3.1.4.58) 0.9321 39 228 GO:0004113
GO:0008664

Map