F426163

General Info

Members Datasets Scaffolds Average Seq Length
372 216 362 205

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0119465|Ga0501034_0119465_1261_2019
Length 252
Sequence MVGILPALPSPDGEWCVNQSDRLTVPNHPRDRAPTTADSGPPEGQDRDVSHLRPVPDHPPSGDGGSVGAHLAELIGRSSRGDESAFAEFYDATAARAFGLAVRVLRDRAQAEEVTQESYLDCWRYAARFDPGKGSAIAWLLTIVHRTAVDRVRSAEAAGRRETEYGHREQTVPHDETAEAATASLEATRVRSALADLTTKQREAVELAFLGGYTHTEVAALLDLPVGTAKTRIRDGLIRLRDALGVGEVAQA

Samples

Sample ID Description Type Environment
1 2643221561 Nocardioides sp. Root151 Isolate Unclassified
2 2643221576 Nocardioides sp. Root614 Isolate Unclassified
3 2643221590 Nocardioides sp. Root682 Isolate Unclassified
4 2643221615 Nocardioides sp. Root224 Isolate Unclassified
5 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
6 2643221696 Nocardioides sp. Root140 Isolate Unclassified
7 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
8 2738541305 Nocardioides sp. CF167 Isolate Unclassified
9 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
10 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
11 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
12 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
13 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
24 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
50 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
129 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
130 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
131 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
132 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
133 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
134 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
135 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
136 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
137 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
138 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
139 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
140 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
141 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
142 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
143 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
144 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
145 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
146 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
147 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
148 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
149 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
150 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
151 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
152 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
153 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
154 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
155 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
156 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
157 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
158 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
159 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
162 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
165 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
166 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
167 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
168 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
169 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
170 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
171 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
172 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
173 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
174 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
175 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
176 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
177 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
178 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
179 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
180 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
186 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
189 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
196 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
197 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
198 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
199 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
200 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
201 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
202 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
203 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
204 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
205 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
206 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
207 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
208 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
209 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
210 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
211 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
212 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
213 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
214 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
215 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
216 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.97
Metatranscriptomes 1.08
Isolates 2.96

Biome Distribution

Category Percentage (%)
Aerial Root 0.54
Bulb 0
Endosphere 8.87
Nodule 0
Rhizoplane 12.1
Rhizosphere 71.77
Stem 0
Stem Tuber 0
Unclassified 6.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10041260 3300001979 Bacteria 1392
2 JGI24737J22298_10041095 3300001990 Bacteria 1418
3 JGI24735J21928_10022439 3300002067 Bacteria 1922
4 rootH1_10171011 3300003316 Bacteria 1003
5 rootH1_10171011 3300003323 Bacteria 1663
6 Ga0055540_1000100 3300003792 Bacteria 96138
7 Ga0070658_10090656 3300005327 Bacteria 2519
8 Ga0070683_100001673 3300005329 Bacteria 17214
9 Ga0070683_100447303 3300005329 Bacteria 1233
10 Ga0070683_100611812 3300005329 Bacteria 1043
11 Ga0070670_100479108 3300005331 Bacteria 1105
12 Ga0070666_10134697 3300005335 Bacteria 1718
13 Ga0070680_100040716 3300005336 Bacteria 3765
14 Ga0070682_100002118 3300005337 Bacteria 11012
15 Ga0070682_100099467 3300005337 Bacteria 1917
16 Ga0070682_100238902 3300005337 Bacteria 1303
17 Ga0068868_100149462 3300005338 Bacteria 1923
18 Ga0068868_100591441 3300005338 Bacteria 982
19 Ga0070660_100015775 3300005339 Bacteria 5465
20 Ga0070660_100084993 3300005339 Bacteria 2488
21 Ga0070660_100093777 3300005339 Bacteria 2371
22 Ga0070668_100740746 3300005347 Bacteria 869
23 Ga0070675_100385065 3300005354 Bacteria 1249
24 Ga0070674_100056934 3300005356 Bacteria 2712
25 Ga0070688_100283001 3300005365 Bacteria 1192
26 Ga0070659_100020977 3300005366 Bacteria 4968
27 Ga0070667_100000330 3300005367 Bacteria 52776
28 Ga0070700_100157929 3300005441 Bacteria 1558
29 Ga0070678_100043637 3300005456 Bacteria 3196
30 Ga0070678_100061292 3300005456 Bacteria 2772
31 Ga0070678_100209689 3300005456 Bacteria 1613
32 Ga0070681_10042801 3300005458 Bacteria 4538
33 Ga0070685_10039367 3300005466 Bacteria 2685
34 Ga0070679_100136195 3300005530 Bacteria 2437
35 Ga0070679_100214812 3300005530 Bacteria 1886
36 Ga0070684_100013323 3300005535 Bacteria 6626
37 Ga0068853_100678117 3300005539 Bacteria 982
38 Ga0070672_100621480 3300005543 Bacteria 942
39 Ga0070665_100002429 3300005548 Bacteria 20530
40 Ga0068855_100097378 3300005563 Bacteria 3389
41 Ga0068857_100004762 3300005577 Bacteria 11490
42 Ga0068857_100131385 3300005577 Bacteria 2258
43 Ga0068856_100030514 3300005614 Bacteria 5269
44 Ga0068856_100304672 3300005614 Bacteria 1611
45 Ga0068852_100180985 3300005616 Bacteria 1982
46 Ga0068852_100506391 3300005616 Bacteria 1203
47 Ga0068864_100574379 3300005618 Bacteria 1092
48 Ga0068864_100662767 3300005618 Bacteria 1017
49 Ga0068861_100047215 3300005719 Bacteria 3249
50 Ga0068861_100066361 3300005719 Bacteria 2782
51 Ga0068861_100299122 3300005719 Bacteria 1393
52 Ga0068863_100548247 3300005841 Bacteria 1142
53 Ga0068858_100027120 3300005842 Bacteria 5322
54 Ga0068860_100000902 3300005843 Bacteria 32958
55 Ga0068860_100437258 3300005843 Bacteria 1299
56 Ga0075365_10006952 3300006038 Bacteria 6286
57 Ga0075365_10131509 3300006038 Bacteria 1732
58 Ga0075365_10372098 3300006038 Bacteria 1008
59 Ga0075363_100003849 3300006048 Bacteria 6472
60 Ga0075363_100004429 3300006048 Bacteria 6143
61 Ga0075363_100383766 3300006048 Bacteria 824
62 Ga0075364_10006310 3300006051 Bacteria 6964
63 Ga0075364_10053548 3300006051 Bacteria 2637
64 Ga0075364_10483923 3300006051 Bacteria 846
65 Ga0075364_10503590 3300006051 Bacteria 828
66 Ga0075432_10186988 3300006058 Bacteria 813
67 Ga0075367_10028714 3300006178 Bacteria 3176
68 Ga0075367_10070871 3300006178 Bacteria 2096
69 Ga0075367_10150388 3300006178 Bacteria 1445
70 Ga0075367_10373579 3300006178 Bacteria 901
71 Ga0097621_100409657 3300006237 Bacteria 1215
72 Ga0075370_10003995 3300006353 Bacteria 7086
73 Ga0075370_10379179 3300006353 Bacteria 847
74 Ga0068871_100190833 3300006358 Bacteria 1765
75 Ga0068871_100529425 3300006358 Bacteria 1065
76 Ga0075428_100661959 3300006844 Bacteria 1113
77 Ga0068865_100211049 3300006881 Bacteria 1513
78 Ga0068865_100426971 3300006881 Bacteria 1091
79 Ga0068865_100470808 3300006881 Bacteria 1042
80 Ga0097620_100692446 3300006931 Bacteria 1110
81 Ga0111539_10534201 3300009094 Bacteria 1366
82 Ga0105245_10000417 3300009098 Bacteria 39694
83 Ga0105243_10087227 3300009148 Bacteria 2561
84 Ga0105243_10118610 3300009148 Bacteria 2227
85 Ga0105243_10351120 3300009148 Bacteria 1354
86 Ga0105243_10369037 3300009148 Bacteria 1323
87 Ga0105242_10303463 3300009176 Bacteria 1458
88 Ga0105242_10798037 3300009176 Bacteria 934
89 Ga0105248_10028644 3300009177 Bacteria 6206
90 Ga0105237_10020154 3300009545 Bacteria 6884
91 Ga0105238_10112399 3300009551 Bacteria 2703
92 Ga0105238_10355575 3300009551 Bacteria 1454
93 Ga0105238_10426373 3300009551 Bacteria 1322
94 Ga0105249_10035703 3300009553 Bacteria 4508
95 Ga0105239_10009362 3300010375 Bacteria 11054
96 Ga0157371_10547585 3300013102 Bacteria 857
97 Ga0157369_10015440 3300013105 Bacteria 8607
98 Ga0163162_10024482 3300013306 Bacteria 5959
99 Ga0163162_10777806 3300013306 Bacteria 1075
100 Ga0157372_10001027 3300013307 Bacteria 30507
101 Ga0157372_10484614 3300013307 Bacteria 1442
102 Ga0157372_10790389 3300013307 Bacteria 1103
103 Ga0157375_10129337 3300013308 Bacteria 2643
104 Ga0157375_10311218 3300013308 Bacteria 1739
105 Ga0157375_10480162 3300013308 Bacteria 1408
106 Ga0157375_10483958 3300013308 Bacteria 1402
107 Ga0163163_10204546 3300014325 Bacteria 2023
108 Ga0163163_11450809 3300014325 Bacteria 748
109 Ga0163163_11727310 3300014325 Bacteria 686
110 Ga0157380_10215369 3300014326 Bacteria 1715
111 Ga0157380_10588744 3300014326 Bacteria 1098
112 Ga0157380_10715308 3300014326 Bacteria 1008
113 Ga0157377_10017536 3300014745 Bacteria 3704
114 Ga0157379_10505060 3300014968 Bacteria 1121
115 Ga0163161_10048166 3300017792 Bacteria 3077
116 Ga0206353_10120784 3300020082 Bacteria 5068
117 Ga0206353_10508075 3300020082 Bacteria 3883
118 Ga0206353_11242324 3300020082 Bacteria 936
119 Ga0206353_11375243 3300020082 Bacteria 3871
120 Ga0209051_1000188 3300025303 Bacteria 109245
121 Ga0207682_10075710 3300025893 Bacteria 1433
122 Ga0207682_10109577 3300025893 Bacteria 1214
123 Ga0207688_10013323 3300025901 Bacteria 4467
124 Ga0207688_10084591 3300025901 Bacteria 1816
125 Ga0207688_10088976 3300025901 Bacteria 1771
126 Ga0207688_10172266 3300025901 Bacteria 1287
127 Ga0207688_10480986 3300025901 Bacteria 776
128 Ga0207647_10026296 3300025904 Bacteria 3810
129 Ga0207647_10071024 3300025904 Bacteria 2101
130 Ga0207647_10074177 3300025904 Bacteria 2050
131 Ga0207643_10152407 3300025908 Bacteria 1386
132 Ga0207705_10190215 3300025909 Bacteria 1552
133 Ga0207707_10108925 3300025912 Bacteria 2422
134 Ga0207660_10071146 3300025917 Bacteria 2530
135 Ga0207662_10217539 3300025918 Bacteria 1243
136 Ga0207657_10071814 3300025919 Bacteria 2930
137 Ga0207657_10093545 3300025919 Bacteria 2504
138 Ga0207657_10140578 3300025919 Bacteria 1973
139 Ga0207657_10429342 3300025919 Bacteria 1038
140 Ga0207652_10027081 3300025921 Bacteria 4777
141 Ga0207652_10256718 3300025921 Bacteria 1577
142 Ga0207694_10146706 3300025924 Bacteria 1899
143 Ga0207694_10404282 3300025924 Bacteria 1136
144 Ga0207650_10748194 3300025925 Bacteria 827
145 Ga0207659_10342451 3300025926 Bacteria 1238
146 Ga0207687_10330733 3300025927 Bacteria 1236
147 Ga0207687_10583555 3300025927 Bacteria 941
148 Ga0207690_10034464 3300025932 Bacteria 3262
149 Ga0207690_10513153 3300025932 Bacteria 971
150 Ga0207690_10721437 3300025932 Bacteria 820
151 Ga0207686_10073144 3300025934 Bacteria 2211
152 Ga0207686_10097833 3300025934 Bacteria 1952
153 Ga0207709_10183874 3300025935 Bacteria 1478
154 Ga0207709_10203960 3300025935 Bacteria 1414
155 Ga0207669_10074574 3300025937 Bacteria 2146
156 Ga0207669_10373527 3300025937 Bacteria 1109
157 Ga0207704_10485557 3300025938 Bacteria 993
158 Ga0207691_10115513 3300025940 Bacteria 2383
159 Ga0207691_10194644 3300025940 Bacteria 1767
160 Ga0207691_10311881 3300025940 Bacteria 1350
161 Ga0207711_10096906 3300025941 Bacteria 2604
162 Ga0207711_10244090 3300025941 Bacteria 1647
163 Ga0207661_10089666 3300025944 Bacteria 2559
164 Ga0207661_10105120 3300025944 Bacteria 2378
165 Ga0207661_10395259 3300025944 Bacteria 1253
166 Ga0207661_10418699 3300025944 Bacteria 1216
167 Ga0207661_10431467 3300025944 Bacteria 1198
168 Ga0207679_10194857 3300025945 Bacteria 1688
169 Ga0207667_10093286 3300025949 Bacteria 3109
170 Ga0207667_10341200 3300025949 Bacteria 1529
171 Ga0207668_10169721 3300025972 Bacteria 1710
172 Ga0207668_10258082 3300025972 Bacteria 1419
173 Ga0207668_10861810 3300025972 Bacteria 805
174 Ga0207658_10001057 3300025986 Bacteria 22345
175 Ga0207658_10028171 3300025986 Bacteria 3954
176 Ga0207658_10353369 3300025986 Bacteria 1280
177 Ga0207703_10023092 3300026035 Bacteria 4884
178 Ga0207678_10052699 3300026067 Bacteria 3508
179 Ga0207678_10157933 3300026067 Bacteria 1937
180 Ga0207702_10025066 3300026078 Bacteria 4948
181 Ga0207641_10460159 3300026088 Bacteria 1231
182 Ga0207648_10088188 3300026089 Bacteria 2709
183 Ga0207676_10084345 3300026095 Bacteria 2590
184 Ga0207674_10008904 3300026116 Bacteria 11537
185 Ga0207674_10138616 3300026116 Bacteria 2393
186 Ga0207683_10022078 3300026121 Bacteria 5462
187 Ga0207683_10817075 3300026121 Bacteria 865
188 Ga0207698_10131379 3300026142 Bacteria 2140
189 Ga0207698_10251703 3300026142 Bacteria 1617
190 Ga0207698_10401479 3300026142 Bacteria 1310
191 Ga0207698_10792329 3300026142 Bacteria 949
192 Ga0207698_11123922 3300026142 Bacteria 799
193 Ga0268266_10003293 3300028379 Bacteria 16233
194 Ga0268266_10088918 3300028379 Bacteria 2704
195 Ga0268266_10343136 3300028379 Bacteria 1402
196 Ga0268264_10000664 3300028381 Bacteria 40313
197 Ga0268264_10426471 3300028381 Bacteria 1280
198 Ga0265327_10004941 3300031251 Bacteria 11471
199 Ga0307409_100180794 3300031995 Bacteria 1867
200 Ga0307416_101237426 3300032002 Bacteria 852
201 Ga0307411_10218206 3300032005 Bacteria 1478
202 Ga0395900_0193244 3300037418 Bacteria 2063
203 Ga0395898_0141819 3300037466 Bacteria 2300
204 Ga0395905_0107739 3300037471 Bacteria 2616
205 Ga0436364_1491479 3300037853 Bacteria 777
206 Ga0395901_0011282 3300038443 Bacteria 9051
207 Ga0395901_0022904 3300038443 Bacteria 6404
208 Ga0395901_0580943 3300038443 Bacteria 1132
209 Ga0436365_1304637 3300039437 Bacteria 1158
210 Ga0439461_0001900 3300041410 Bacteria 3291
211 Ga0439465_0157601 3300041413 Bacteria 813
212 Ga0451789_0323399 3300041443 Bacteria 1137
213 Ga0451793_0315112 3300041452 Bacteria 1070
214 Ga0451843_1776172 3300041509 Bacteria 1344
215 Ga0451853_1863125 3300041512 Bacteria 2539
216 Ga0439431_0006968 3300041997 Bacteria 2515
217 Ga0439442_055939 3300042002 Bacteria 834
218 Ga0439445_0013669 3300042004 Bacteria 1967
219 Ga0439448_0001064 3300042005 Bacteria 6891
220 Ga0439434_0014422 3300042435 Bacteria 2350
221 Ga0466965_0012426 3300044683 Bacteria 4005
222 Ga0466965_0012909 3300044683 Bacteria 3935
223 Ga0466965_0023343 3300044683 Bacteria 2987
224 Ga0466966_0113792 3300044684 Bacteria 1666
225 Ga0466966_0233196 3300044684 Bacteria 1110
226 Ga0466961_0431263 3300044693 Bacteria 798
227 Ga0466963_0081829 3300044694 Bacteria 2188
228 Ga0466964_0086114 3300044706 Bacteria 1358
229 Ga0466964_0111128 3300044706 Bacteria 1222
230 Ga0466971_0150962 3300044719 Bacteria 1085
231 Ga0466970_0004691 3300044765 Bacteria 6749
232 Ga0466970_0014900 3300044765 Bacteria 3997
233 Ga0466970_0096913 3300044765 Bacteria 1604
234 Ga0466970_0189517 3300044765 Bacteria 1142
235 Ga0466957_0005409 3300044842 Bacteria 7168
236 Ga0466957_0086429 3300044842 Bacteria 1960
237 Ga0466957_0348321 3300044842 Bacteria 1004
238 Ga0466960_0056412 3300044901 Bacteria 1912
239 Ga0466960_0102154 3300044901 Bacteria 1478
240 Ga0466967_0090615 3300045976 Bacteria 2778
241 Ga0466967_0184278 3300045976 Bacteria 1970
242 Ga0466967_0208477 3300045976 Bacteria 1853
243 Ga0466967_0499133 3300045976 Bacteria 1194
244 Ga0466967_0693978 3300045976 Bacteria 1008
245 Ga0495653_0489991 3300046463 Bacteria 768
246 Ga0495618_0290234 3300046514 Bacteria 1018
247 Ga0495645_0129262 3300046543 Bacteria 1772
248 Ga0495667_0165855 3300046559 Bacteria 1420
249 Ga0495657_0124368 3300046675 Bacteria 1622
250 Ga0495623_0235563 3300046679 Bacteria 1036
251 Ga0495674_0397595 3300047319 Bacteria 1113
252 Ga0495675_0138545 3300047444 Bacteria 1509
253 Ga0495684_0574667 3300047471 Bacteria 764
254 Ga0495602_0175037 3300048088 Bacteria 1661
255 Ga0496100_0000015 3300048903 Bacteria 167108
256 Ga0496100_0304495 3300048903 Bacteria 1193
257 Ga0496101_0000039 3300048904 Bacteria 164695
258 Ga0496102_0016704 3300048905 Bacteria 6419
259 Ga0496102_0135267 3300048905 Bacteria 2309
260 Ga0496102_0230755 3300048905 Bacteria 1745
261 Ga0496103_0000364 3300048906 Bacteria 40827
262 Ga0496103_0031747 3300048906 Bacteria 3220
263 Ga0496103_0243585 3300048906 Bacteria 1157
264 Ga0496104_0008952 3300048907 Bacteria 8898
265 Ga0496104_0343891 3300048907 Bacteria 1405
266 Ga0496105_0255073 3300048908 Bacteria 1420
267 Ga0496105_0376867 3300048908 Bacteria 1129
268 Ga0496106_0001290 3300048909 Bacteria 18819
269 Ga0496107_0000151 3300048910 Bacteria 35043
270 Ga0496107_0294427 3300048910 Bacteria 1208
271 Ga0496107_0334980 3300048910 Bacteria 1126
272 Ga0496108_0001355 3300048911 Bacteria 19250
273 Ga0496109_0000484 3300048912 Bacteria 33960
274 Ga0496109_0035855 3300048912 Bacteria 4478
275 Ga0496109_0038597 3300048912 Bacteria 4318
276 Ga0496109_0057131 3300048912 Bacteria 3561
277 Ga0496109_0068369 3300048912 Bacteria 3257
278 Ga0496109_0437030 3300048912 Bacteria 1236
279 Ga0496109_0583178 3300048912 Bacteria 1054
280 Ga0496110_0000902 3300048913 Bacteria 20888
281 Ga0496110_0166399 3300048913 Bacteria 2000
282 Ga0496110_0186219 3300048913 Bacteria 1885
283 Ga0496110_0518169 3300048913 Bacteria 1085
284 Ga0496110_0677625 3300048913 Bacteria 932
285 Ga0496110_0706560 3300048913 Bacteria 910
286 Ga0496110_0811406 3300048913 Bacteria 840
287 Ga0496111_0002352 3300048914 Bacteria 11397
288 Ga0496111_0052836 3300048914 Bacteria 2935
289 Ga0496111_0136339 3300048914 Bacteria 1818
290 Ga0496112_0360503 3300048915 Bacteria 1396
291 Ga0496113_0015594 3300048916 Bacteria 5230
292 Ga0496113_0077873 3300048916 Bacteria 2536
293 Ga0496114_0000091 3300048917 Bacteria 64989
294 Ga0496114_0021303 3300048917 Bacteria 5272
295 Ga0496114_0130600 3300048917 Bacteria 2169
296 Ga0496114_0315741 3300048917 Bacteria 1380
297 Ga0496115_0001969 3300048918 Bacteria 14666
298 Ga0496116_0095745 3300048919 Bacteria 1790
299 Ga0496117_0292400 3300048920 Bacteria 866
300 Ga0496118_0206921 3300048921 Bacteria 1155
301 Ga0496119_0002257 3300048922 Bacteria 21426
302 Ga0496120_0061431 3300048923 Bacteria 2097
303 Ga0496121_0000002 3300048924 Bacteria 1494588
304 Ga0496122_0000051 3300048925 Bacteria 265104
305 Ga0496123_0004107 3300048926 Bacteria 15610
306 Ga0496124_0000002 3300048927 Bacteria 1494588
307 Ga0496125_0000002 3300048928 Bacteria 1480920
308 Ga0496126_0000011 3300048929 Bacteria 744275
309 Ga0501032_0000681 3300049569 Bacteria 27604
310 Ga0501032_0116250 3300049569 Bacteria 1769
311 Ga0501034_0005061 3300049571 Bacteria 14484
312 Ga0501034_0119465 3300049571 Bacteria 2622
313 Ga0501036_0255455 3300049572 Bacteria 1468
314 Ga0501037_0000858 3300049573 Bacteria 22628
315 Ga0501037_0274730 3300049573 Bacteria 1175
316 Ga0501038_0001375 3300049574 Bacteria 22223
317 Ga0501039_0000654 3300049575 Bacteria 25010
318 Ga0501039_0006898 3300049575 Bacteria 8640
319 Ga0501039_0081545 3300049575 Bacteria 2519
320 Ga0501039_0087848 3300049575 Bacteria 2422
321 Ga0501039_0131084 3300049575 Bacteria 1968
322 Ga0501041_0112276 3300049577 Bacteria 1691
323 Ga0501042_0072477 3300049578 Bacteria 2465
324 Ga0501042_0206886 3300049578 Bacteria 1415
325 Ga0501043_0001772 3300049579 Bacteria 18561
326 Ga0501043_0077532 3300049579 Bacteria 2611
327 Ga0501048_0152941 3300049582 Bacteria 1632
328 Ga0501070_0000349 3300049586 Bacteria 42028
329 Ga0501070_0104622 3300049586 Bacteria 2340
330 Ga0501070_0463640 3300049586 Bacteria 1020
331 Ga0501071_0046760 3300049587 Bacteria 3108
332 Ga0501071_0331368 3300049587 Bacteria 1157
333 Ga0501072_0073285 3300049588 Bacteria 2707
334 Ga0501073_0064610 3300049589 Bacteria 2552
335 Ga0501073_0102830 3300049589 Bacteria 1984
336 Ga0501074_0031226 3300049590 Bacteria 3859
337 Ga0501074_0121281 3300049590 Bacteria 1870
338 Ga0501076_0049021 3300049592 Bacteria 3339
339 Ga0501079_0118424 3300049741 Bacteria 2059
340 Ga0501079_0432116 3300049741 Bacteria 1034
341 Ga0501080_0074544 3300049742 Bacteria 3156
342 Ga0501083_0115388 3300049744 Bacteria 1763
343 Ga0501035_0152732 3300049822 Bacteria 2003
344 Ga0501044_0176432 3300049823 Bacteria 2106
345 nmdc:mga03n38_11812_c1 3300050490 Bacteria 3267
346 nmdc:mga03n38_181892_c1 3300050490 Bacteria 1077
347 nmdc:mga03n38_445020_c1 3300050490 Bacteria 720
348 nmdc:mga03n38_84401_c1 3300050490 Bacteria 1499
349 nmdc:mga00v17_16757_c1 3300050491 Bacteria 4133
350 nmdc:mga0yw44_153671_c1 3300050492 Bacteria 1502
351 nmdc:mga0yw44_162179_c1 3300050492 Bacteria 1464
352 nmdc:mga0yw44_76170_c1 3300050492 Bacteria 2093
353 nmdc:mga06z11_136727_c1 3300050494 Bacteria 1381
354 nmdc:mga06z11_61241_c1 3300050494 Bacteria 1962
355 nmdc:mga06z11_73836_c1 3300050494 Bacteria 1812
356 nmdc:mga04h51_168038_c1 3300050495 Bacteria 847
357 nmdc:mga07m45_244336_c1 3300050496 Bacteria 1044
358 nmdc:mga07m45_8322_c1 3300050496 Bacteria 5327
359 nmdc:mga0sz30_32062_c1 3300050516 Bacteria 2177
360 Ga0501084_0073899 3300054114 Bacteria 2854
361 Ga0501082_0065801 3300060353 Bacteria 3121
362 Ga0466962_0165196 3300061719 Bacteria 1077

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031251 Ga0265327_10004941 Ga0265327_100049417 179
2 3300044683 Ga0466965_0023343 Ga0466965_0023343_557_1120 179
3 3300048903 Ga0496100_0000015 Ga0496100_0000015_56016_56579 179
4 3300048904 Ga0496101_0000039 Ga0496101_0000039_53465_54028 179
5 3300048905 Ga0496102_0016704 Ga0496102_0016704_660_1223 179
6 3300048906 Ga0496103_0000364 Ga0496103_0000364_34036_34599 179
7 3300048909 Ga0496106_0001290 Ga0496106_0001290_2012_2575 179
8 3300048910 Ga0496107_0000151 Ga0496107_0000151_10117_10680 179
9 3300048911 Ga0496108_0001355 Ga0496108_0001355_7691_8254 179
10 3300048912 Ga0496109_0000484 Ga0496109_0000484_7237_7800 179
11 3300048913 Ga0496110_0000902 Ga0496110_0000902_16678_17241 179
12 3300048914 Ga0496111_0002352 Ga0496111_0002352_8184_8747 179
13 3300048916 Ga0496113_0077873 Ga0496113_0077873_981_1544 179
14 3300048917 Ga0496114_0000091 Ga0496114_0000091_16833_17396 179
15 3300048918 Ga0496115_0001969 Ga0496115_0001969_8133_8696 179
16 3300048919 Ga0496116_0095745 Ga0496116_0095745_28_591 179
17 3300048920 Ga0496117_0292400 Ga0496117_0292400_28_591 179
18 3300048921 Ga0496118_0206921 Ga0496118_0206921_156_719 179
19 3300048922 Ga0496119_0002257 Ga0496119_0002257_20518_21081 179
20 3300048923 Ga0496120_0061431 Ga0496120_0061431_369_932 179
21 3300048924 Ga0496121_0000002 Ga0496121_0000002_1257837_1258400 179
22 3300048925 Ga0496122_0000051 Ga0496122_0000051_100813_101376 179
23 3300048926 Ga0496123_0004107 Ga0496123_0004107_14578_15141 179
24 3300048927 Ga0496124_0000002 Ga0496124_0000002_236189_236752 179
25 3300048928 Ga0496125_0000002 Ga0496125_0000002_1257837_1258400 179
26 3300048929 Ga0496126_0000011 Ga0496126_0000011_236189_236752 179
27 3300049569 Ga0501032_0000681 Ga0501032_0000681_7691_8323 181
28 3300049571 Ga0501034_0005061 Ga0501034_0005061_8980_9612 181
29 3300049573 Ga0501037_0000858 Ga0501037_0000858_4873_5505 181
30 3300049574 Ga0501038_0001375 Ga0501038_0001375_16718_17350 181
31 3300049575 Ga0501039_0000654 Ga0501039_0000654_13480_14112 181
32 3300049579 Ga0501043_0001772 Ga0501043_0001772_11930_12562 181
33 3300049586 Ga0501070_0000349 Ga0501070_0000349_11042_11674 181
34 3300042005 Ga0439448_0001064 Ga0439448_0001064_4467_5078 182
35 3300049589 Ga0501073_0102830 Ga0501073_0102830_29_661 184
36 iso_pu_bacteria 2738541264 2738666361 185
37 iso_pu_bacteria 2738541356 2739146285 185
38 3300003792 Ga0055540_1000100 Ga0055540_100010070 189
39 3300005367 Ga0070667_100000330 Ga0070667_10000033012 189
40 3300009545 Ga0105237_10020154 Ga0105237_100201545 189
41 3300010375 Ga0105239_10009362 Ga0105239_100093627 189
42 3300025303 Ga0209051_1000188 Ga0209051_100018856 189
43 3300025986 Ga0207658_10001057 Ga0207658_1000105717 189
44 3300003316 rootH1_10171011 rootH1_101710111 190
45 3300006048 Ga0075363_100004429 Ga0075363_1000044291 190
46 3300020082 Ga0206353_11242324 Ga0206353_112423242 190
47 3300045976 Ga0466967_0090615 Ga0466967_0090615_1595_2251 190
48 3300046463 Ga0495653_0489991 Ga0495653_0489991_134_736 191
49 3300005577 Ga0068857_100131385 Ga0068857_1001313852 192
50 3300020082 Ga0206353_11375243 Ga0206353_113752432 192
51 3300025919 Ga0207657_10093545 Ga0207657_100935452 192
52 3300026116 Ga0207674_10138616 Ga0207674_101386162 192
53 3300009148 Ga0105243_10369037 Ga0105243_103690372 194
54 3300049587 Ga0501071_0331368 Ga0501071_0331368_282_881 194
55 iso_pu_bacteria 2738541305 2738868636 194
56 3300005530 Ga0070679_100214812 Ga0070679_1002148122 195
57 3300005616 Ga0068852_100180985 Ga0068852_1001809853 195
58 3300025904 Ga0207647_10071024 Ga0207647_100710243 195
59 3300025921 Ga0207652_10256718 Ga0207652_102567182 195
60 3300025944 Ga0207661_10089666 Ga0207661_100896663 195
61 3300025949 Ga0207667_10093286 Ga0207667_100932862 195
62 3300026142 Ga0207698_10401479 Ga0207698_104014792 195
63 iso_pu_bacteria 2643221576 2643891194 195
64 iso_pu_bacteria 2643221590 2643960250 195
65 3300038443 Ga0395901_0580943 Ga0395901_0580943_291_902 196
66 iso_pu_bacteria 2643221615 2644092682 196
67 iso_pu_bacteria 2643221657 2644322295 196
68 iso_pu_bacteria 2984576629 2984578357 196
69 iso_pu_bacteria 2990256926 2990260836 196
70 3300005339 Ga0070660_100084993 Ga0070660_1000849932 197
71 3300005616 Ga0068852_100506391 Ga0068852_1005063912 197
72 3300006048 Ga0075363_100383766 Ga0075363_1003837662 197
73 3300009148 Ga0105243_10351120 Ga0105243_103511201 197
74 3300009551 Ga0105238_10426373 Ga0105238_104263732 197
75 3300013307 Ga0157372_10484614 Ga0157372_104846142 197
76 3300014325 Ga0163163_11450809 Ga0163163_114508091 197
77 3300025935 Ga0207709_10183874 Ga0207709_101838742 197
78 3300026142 Ga0207698_10131379 Ga0207698_101313792 197
79 3300037466 Ga0395898_0141819 Ga0395898_0141819_499_1113 197
80 3300041443 Ga0451789_0323399 Ga0451789_0323399_186_809 197
81 3300048913 Ga0496110_0518169 Ga0496110_0518169_226_849 197
82 3300050495 nmdc:mga04h51_168038_c1 nmdc:mga04h51_168038_c1_105_719 197
83 3300001990 JGI24737J22298_10041095 JGI24737J22298_100410952 198
84 3300002067 JGI24735J21928_10022439 JGI24735J21928_100224393 198
85 3300005327 Ga0070658_10090656 Ga0070658_100906562 198
86 3300005331 Ga0070670_100479108 Ga0070670_1004791082 198
87 3300005339 Ga0070660_100015775 Ga0070660_1000157755 198
88 3300005366 Ga0070659_100020977 Ga0070659_1000209773 198
89 3300005563 Ga0068855_100097378 Ga0068855_1000973784 198
90 3300006051 Ga0075364_10503590 Ga0075364_105035901 198
91 3300006178 Ga0075367_10070871 Ga0075367_100708712 198
92 3300006353 Ga0075370_10379179 Ga0075370_103791792 198
93 3300006931 Ga0097620_100692446 Ga0097620_1006924462 198
94 3300009176 Ga0105242_10798037 Ga0105242_107980372 198
95 3300014325 Ga0163163_11727310 Ga0163163_117273101 198
96 3300014326 Ga0157380_10588744 Ga0157380_105887442 198
97 3300025901 Ga0207688_10088976 Ga0207688_100889762 198
98 3300025904 Ga0207647_10026296 Ga0207647_100262963 198
99 3300025932 Ga0207690_10034464 Ga0207690_100344643 198
100 3300025949 Ga0207667_10341200 Ga0207667_103412002 198
101 3300026142 Ga0207698_10792329 Ga0207698_107923292 198
102 3300037853 Ga0436364_1491479 Ga0436364_1491479_139_747 198
103 3300038443 Ga0395901_0011282 Ga0395901_0011282_758_1366 198
104 3300039437 Ga0436365_1304637 Ga0436365_1304637_513_1127 198
105 3300044683 Ga0466965_0012909 Ga0466965_0012909_857_1453 198
106 3300044901 Ga0466960_0102154 Ga0466960_0102154_79_687 198
107 3300048913 Ga0496110_0706560 Ga0496110_0706560_56_664 198
108 3300048914 Ga0496111_0052836 Ga0496111_0052836_2272_2880 198
109 3300048917 Ga0496114_0315741 Ga0496114_0315741_330_938 198
110 3300049569 Ga0501032_0116250 Ga0501032_0116250_554_1168 198
111 3300049575 Ga0501039_0006898 Ga0501039_0006898_2790_3404 198
112 3300049578 Ga0501042_0206886 Ga0501042_0206886_701_1315 198
113 3300049586 Ga0501070_0104622 Ga0501070_0104622_230_835 198
114 3300049741 Ga0501079_0432116 Ga0501079_0432116_60_674 198
115 3300050494 nmdc:mga06z11_73836_c1 nmdc:mga06z11_73836_c1_580_1194 198
116 3300050496 nmdc:mga07m45_244336_c1 nmdc:mga07m45_244336_c1_416_1021 198
117 3300050516 nmdc:mga0sz30_32062_c1 nmdc:mga0sz30_32062_c1_1170_1772 198
118 iso_pu_bacteria 2643221561 2643824937 198
119 iso_pu_bacteria 2643221696 2644532512 198
120 3300005337 Ga0070682_100099467 Ga0070682_1000994673 199
121 3300005338 Ga0068868_100149462 Ga0068868_1001494623 199
122 3300005339 Ga0070660_100093777 Ga0070660_1000937773 199
123 3300005354 Ga0070675_100385065 Ga0070675_1003850652 199
124 3300005356 Ga0070674_100056934 Ga0070674_1000569342 199
125 3300005456 Ga0070678_100061292 Ga0070678_1000612922 199
126 3300005543 Ga0070672_100621480 Ga0070672_1006214802 199
127 3300005618 Ga0068864_100574379 Ga0068864_1005743792 199
128 3300005618 Ga0068864_100662767 Ga0068864_1006627671 199
129 3300005719 Ga0068861_100299122 Ga0068861_1002991222 199
130 3300006038 Ga0075365_10372098 Ga0075365_103720982 199
131 3300013306 Ga0163162_10024482 Ga0163162_100244822 199
132 3300013308 Ga0157375_10480162 Ga0157375_104801622 199
133 3300025893 Ga0207682_10109577 Ga0207682_101095772 199
134 3300025901 Ga0207688_10013323 Ga0207688_100133232 199
135 3300025908 Ga0207643_10152407 Ga0207643_101524072 199
136 3300025919 Ga0207657_10140578 Ga0207657_101405782 199
137 3300025925 Ga0207650_10748194 Ga0207650_107481941 199
138 3300025926 Ga0207659_10342451 Ga0207659_103424512 199
139 3300025927 Ga0207687_10583555 Ga0207687_105835552 199
140 3300025934 Ga0207686_10097833 Ga0207686_100978332 199
141 3300025937 Ga0207669_10074574 Ga0207669_100745742 199
142 3300025940 Ga0207691_10194644 Ga0207691_101946442 199
143 3300025940 Ga0207691_10311881 Ga0207691_103118812 199
144 3300025941 Ga0207711_10244090 Ga0207711_102440902 199
145 3300025972 Ga0207668_10258082 Ga0207668_102580822 199
146 3300026067 Ga0207678_10157933 Ga0207678_101579333 199
147 3300026121 Ga0207683_10022078 Ga0207683_100220782 199
148 3300028379 Ga0268266_10343136 Ga0268266_103431362 199
149 3300031995 Ga0307409_100180794 Ga0307409_1001807942 199
150 3300032002 Ga0307416_101237426 Ga0307416_1012374262 199
151 3300037418 Ga0395900_0193244 Ga0395900_0193244_90_698 199
152 3300037471 Ga0395905_0107739 Ga0395905_0107739_1291_1938 199
153 3300038443 Ga0395901_0022904 Ga0395901_0022904_466_1074 199
154 3300041410 Ga0439461_0001900 Ga0439461_0001900_923_1522 199
155 3300041413 Ga0439465_0157601 Ga0439465_0157601_154_753 199
156 3300041452 Ga0451793_0315112 Ga0451793_0315112_86_697 199
157 3300041997 Ga0439431_0006968 Ga0439431_0006968_1105_1704 199
158 3300042002 Ga0439442_055939 Ga0439442_055939_22_621 199
159 3300042004 Ga0439445_0013669 Ga0439445_0013669_57_656 199
160 3300042435 Ga0439434_0014422 Ga0439434_0014422_725_1324 199
161 3300044683 Ga0466965_0012426 Ga0466965_0012426_2100_2723 199
162 3300044684 Ga0466966_0113792 Ga0466966_0113792_678_1289 199
163 3300044706 Ga0466964_0111128 Ga0466964_0111128_135_746 199
164 3300044765 Ga0466970_0189517 Ga0466970_0189517_174_785 199
165 3300044842 Ga0466957_0005409 Ga0466957_0005409_5911_6522 199
166 3300044842 Ga0466957_0086429 Ga0466957_0086429_455_1078 199
167 3300045976 Ga0466967_0693978 Ga0466967_0693978_133_756 199
168 3300048903 Ga0496100_0304495 Ga0496100_0304495_290_901 199
169 3300048905 Ga0496102_0135267 Ga0496102_0135267_568_1179 199
170 3300048906 Ga0496103_0031747 Ga0496103_0031747_40_651 199
171 3300048907 Ga0496104_0008952 Ga0496104_0008952_7622_8233 199
172 3300048908 Ga0496105_0376867 Ga0496105_0376867_385_996 199
173 3300048910 Ga0496107_0294427 Ga0496107_0294427_85_696 199
174 3300048912 Ga0496109_0068369 Ga0496109_0068369_1831_2442 199
175 3300048913 Ga0496110_0166399 Ga0496110_0166399_705_1316 199
176 3300048914 Ga0496111_0136339 Ga0496111_0136339_1125_1736 199
177 3300048915 Ga0496112_0360503 Ga0496112_0360503_293_904 199
178 3300049575 Ga0501039_0131084 Ga0501039_0131084_83_691 199
179 3300050490 nmdc:mga03n38_181892_c1 nmdc:mga03n38_181892_c1_260_868 199
180 3300050490 nmdc:mga03n38_445020_c1 nmdc:mga03n38_445020_c1_34_642 199
181 3300050492 nmdc:mga0yw44_153671_c1 nmdc:mga0yw44_153671_c1_253_861 199
182 3300050492 nmdc:mga0yw44_76170_c1 nmdc:mga0yw44_76170_c1_783_1391 199
183 3300005329 Ga0070683_100611812 Ga0070683_1006118122 200
184 3300005338 Ga0068868_100591441 Ga0068868_1005914411 200
185 3300005843 Ga0068860_100000902 Ga0068860_10000090231 200
186 3300006038 Ga0075365_10006952 Ga0075365_100069522 200
187 3300006048 Ga0075363_100003849 Ga0075363_1000038495 200
188 3300006051 Ga0075364_10006310 Ga0075364_100063104 200
189 3300006051 Ga0075364_10053548 Ga0075364_100535482 200
190 3300006178 Ga0075367_10028714 Ga0075367_100287142 200
191 3300006178 Ga0075367_10150388 Ga0075367_101503882 200
192 3300006178 Ga0075367_10373579 Ga0075367_103735792 200
193 3300006353 Ga0075370_10003995 Ga0075370_100039953 200
194 3300006844 Ga0075428_100661959 Ga0075428_1006619591 200
195 3300020082 Ga0206353_10120784 Ga0206353_101207844 200
196 3300025919 Ga0207657_10429342 Ga0207657_104293422 200
197 3300025986 Ga0207658_10028171 Ga0207658_100281712 200
198 3300025986 Ga0207658_10353369 Ga0207658_103533692 200
199 3300026088 Ga0207641_10460159 Ga0207641_104601592 200
200 3300028381 Ga0268264_10000664 Ga0268264_100006649 200
201 3300041509 Ga0451843_1776172 Ga0451843_1776172_377_997 200
202 3300044684 Ga0466966_0233196 Ga0466966_0233196_87_701 200
203 3300044693 Ga0466961_0431263 Ga0466961_0431263_75_686 200
204 3300044719 Ga0466971_0150962 Ga0466971_0150962_229_840 200
205 3300044765 Ga0466970_0096913 Ga0466970_0096913_341_964 200
206 3300044842 Ga0466957_0348321 Ga0466957_0348321_283_894 200
207 3300045976 Ga0466967_0208477 Ga0466967_0208477_639_1250 200
208 3300046514 Ga0495618_0290234 Ga0495618_0290234_315_941 200
209 3300046543 Ga0495645_0129262 Ga0495645_0129262_856_1482 200
210 3300046559 Ga0495667_0165855 Ga0495667_0165855_642_1268 200
211 3300046675 Ga0495657_0124368 Ga0495657_0124368_814_1440 200
212 3300046679 Ga0495623_0235563 Ga0495623_0235563_197_823 200
213 3300047319 Ga0495674_0397595 Ga0495674_0397595_355_981 200
214 3300047444 Ga0495675_0138545 Ga0495675_0138545_727_1353 200
215 3300047471 Ga0495684_0574667 Ga0495684_0574667_53_679 200
216 3300048088 Ga0495602_0175037 Ga0495602_0175037_714_1340 200
217 3300048912 Ga0496109_0437030 Ga0496109_0437030_186_809 200
218 3300048913 Ga0496110_0186219 Ga0496110_0186219_489_1112 200
219 3300049572 Ga0501036_0255455 Ga0501036_0255455_375_992 200
220 3300049575 Ga0501039_0087848 Ga0501039_0087848_1664_2281 200
221 3300049577 Ga0501041_0112276 Ga0501041_0112276_507_1124 200
222 3300049578 Ga0501042_0072477 Ga0501042_0072477_89_706 200
223 3300049582 Ga0501048_0152941 Ga0501048_0152941_696_1313 200
224 3300049587 Ga0501071_0046760 Ga0501071_0046760_654_1271 200
225 3300049590 Ga0501074_0121281 Ga0501074_0121281_230_847 200
226 3300049592 Ga0501076_0049021 Ga0501076_0049021_440_1057 200
227 3300050490 nmdc:mga03n38_11812_c1 nmdc:mga03n38_11812_c1_2181_2849 200
228 3300050490 nmdc:mga03n38_84401_c1 nmdc:mga03n38_84401_c1_603_1235 200
229 3300050491 nmdc:mga00v17_16757_c1 nmdc:mga00v17_16757_c1_645_1313 200
230 3300050492 nmdc:mga0yw44_162179_c1 nmdc:mga0yw44_162179_c1_267_935 200
231 3300050494 nmdc:mga06z11_136727_c1 nmdc:mga06z11_136727_c1_268_936 200
232 3300050494 nmdc:mga06z11_61241_c1 nmdc:mga06z11_61241_c1_80_712 200
233 3300050496 nmdc:mga07m45_8322_c1 nmdc:mga07m45_8322_c1_2838_3506 200
234 3300061719 Ga0466962_0165196 Ga0466962_0165196_131_754 200
235 3300005719 Ga0068861_100066361 Ga0068861_1000663613 201
236 3300009094 Ga0111539_10534201 Ga0111539_105342012 201
237 3300009148 Ga0105243_10087227 Ga0105243_100872273 201
238 3300014326 Ga0157380_10215369 Ga0157380_102153692 201
239 3300032005 Ga0307411_10218206 Ga0307411_102182062 201
240 3300005365 Ga0070688_100283001 Ga0070688_1002830012 203
241 3300006881 Ga0068865_100470808 Ga0068865_1004708082 203
242 3300014326 Ga0157380_10715308 Ga0157380_107153081 203
243 3300025901 Ga0207688_10172266 Ga0207688_101722662 203
244 3300025918 Ga0207662_10217539 Ga0207662_102175392 203
245 3300025938 Ga0207704_10485557 Ga0207704_104855571 203
246 3300041512 Ga0451853_1863125 Ga0451853_1863125_115_747 203
247 3300044706 Ga0466964_0086114 Ga0466964_0086114_578_1189 203
248 3300044765 Ga0466970_0004691 Ga0466970_0004691_266_877 203
249 3300044765 Ga0466970_0014900 Ga0466970_0014900_3051_3662 203
250 3300044901 Ga0466960_0056412 Ga0466960_0056412_247_858 203
251 3300045976 Ga0466967_0499133 Ga0466967_0499133_162_773 203
252 3300048906 Ga0496103_0243585 Ga0496103_0243585_243_854 203
253 3300048913 Ga0496110_0811406 Ga0496110_0811406_124_735 203
254 3300001979 JGI24740J21852_10041260 JGI24740J21852_100412602 204
255 3300005329 Ga0070683_100001673 Ga0070683_10000167310 204
256 3300005329 Ga0070683_100447303 Ga0070683_1004473032 204
257 3300005335 Ga0070666_10134697 Ga0070666_101346971 204
258 3300005336 Ga0070680_100040716 Ga0070680_1000407163 204
259 3300005337 Ga0070682_100002118 Ga0070682_1000021185 204
260 3300005337 Ga0070682_100238902 Ga0070682_1002389021 204
261 3300005347 Ga0070668_100740746 Ga0070668_1007407462 204
262 3300005441 Ga0070700_100157929 Ga0070700_1001579292 204
263 3300005456 Ga0070678_100043637 Ga0070678_1000436373 204
264 3300005456 Ga0070678_100209689 Ga0070678_1002096891 204
265 3300005458 Ga0070681_10042801 Ga0070681_100428013 204
266 3300005466 Ga0070685_10039367 Ga0070685_100393673 204
267 3300005530 Ga0070679_100136195 Ga0070679_1001361951 204
268 3300005535 Ga0070684_100013323 Ga0070684_1000133235 204
269 3300005539 Ga0068853_100678117 Ga0068853_1006781171 204
270 3300005548 Ga0070665_100002429 Ga0070665_10000242915 204
271 3300005577 Ga0068857_100004762 Ga0068857_1000047626 204
272 3300005614 Ga0068856_100030514 Ga0068856_1000305144 204
273 3300005614 Ga0068856_100304672 Ga0068856_1003046722 204
274 3300005719 Ga0068861_100047215 Ga0068861_1000472152 204
275 3300005841 Ga0068863_100548247 Ga0068863_1005482471 204
276 3300005842 Ga0068858_100027120 Ga0068858_1000271205 204
277 3300005843 Ga0068860_100437258 Ga0068860_1004372582 204
278 3300006038 Ga0075365_10131509 Ga0075365_101315092 204
279 3300006051 Ga0075364_10483923 Ga0075364_104839231 204
280 3300006058 Ga0075432_10186988 Ga0075432_101869882 204
281 3300006237 Ga0097621_100409657 Ga0097621_1004096572 204
282 3300006358 Ga0068871_100190833 Ga0068871_1001908332 204
283 3300006358 Ga0068871_100529425 Ga0068871_1005294252 204
284 3300006881 Ga0068865_100211049 Ga0068865_1002110492 204
285 3300006881 Ga0068865_100426971 Ga0068865_1004269712 204
286 3300009098 Ga0105245_10000417 Ga0105245_1000041721 204
287 3300009148 Ga0105243_10118610 Ga0105243_101186103 204
288 3300009176 Ga0105242_10303463 Ga0105242_103034631 204
289 3300009177 Ga0105248_10028644 Ga0105248_100286442 204
290 3300009551 Ga0105238_10112399 Ga0105238_101123992 204
291 3300009551 Ga0105238_10355575 Ga0105238_103555752 204
292 3300009553 Ga0105249_10035703 Ga0105249_100357033 204
293 3300013102 Ga0157371_10547585 Ga0157371_105475852 204
294 3300013105 Ga0157369_10015440 Ga0157369_100154404 204
295 3300013306 Ga0163162_10777806 Ga0163162_107778061 204
296 3300013307 Ga0157372_10001027 Ga0157372_1000102722 204
297 3300013307 Ga0157372_10790389 Ga0157372_107903892 204
298 3300013308 Ga0157375_10129337 Ga0157375_101293372 204
299 3300013308 Ga0157375_10311218 Ga0157375_103112182 204
300 3300013308 Ga0157375_10483958 Ga0157375_104839582 204
301 3300014325 Ga0163163_10204546 Ga0163163_102045462 204
302 3300014745 Ga0157377_10017536 Ga0157377_100175362 204
303 3300014968 Ga0157379_10505060 Ga0157379_105050601 204
304 3300017792 Ga0163161_10048166 Ga0163161_100481663 204
305 3300020082 Ga0206353_10508075 Ga0206353_105080753 204
306 3300025893 Ga0207682_10075710 Ga0207682_100757102 204
307 3300025901 Ga0207688_10084591 Ga0207688_100845912 204
308 3300025901 Ga0207688_10480986 Ga0207688_104809861 204
309 3300025904 Ga0207647_10074177 Ga0207647_100741772 204
310 3300025909 Ga0207705_10190215 Ga0207705_101902152 204
311 3300025912 Ga0207707_10108925 Ga0207707_101089253 204
312 3300025917 Ga0207660_10071146 Ga0207660_100711461 204
313 3300025919 Ga0207657_10071814 Ga0207657_100718143 204
314 3300025921 Ga0207652_10027081 Ga0207652_100270813 204
315 3300025924 Ga0207694_10146706 Ga0207694_101467062 204
316 3300025924 Ga0207694_10404282 Ga0207694_104042821 204
317 3300025927 Ga0207687_10330733 Ga0207687_103307332 204
318 3300025932 Ga0207690_10513153 Ga0207690_105131532 204
319 3300025932 Ga0207690_10721437 Ga0207690_107214372 204
320 3300025934 Ga0207686_10073144 Ga0207686_100731442 204
321 3300025935 Ga0207709_10203960 Ga0207709_102039602 204
322 3300025937 Ga0207669_10373527 Ga0207669_103735272 204
323 3300025940 Ga0207691_10115513 Ga0207691_101155132 204
324 3300025941 Ga0207711_10096906 Ga0207711_100969062 204
325 3300025944 Ga0207661_10105120 Ga0207661_101051203 204
326 3300025944 Ga0207661_10395259 Ga0207661_103952592 204
327 3300025944 Ga0207661_10418699 Ga0207661_104186992 204
328 3300025944 Ga0207661_10431467 Ga0207661_104314672 204
329 3300025945 Ga0207679_10194857 Ga0207679_101948571 204
330 3300025972 Ga0207668_10169721 Ga0207668_101697212 204
331 3300025972 Ga0207668_10861810 Ga0207668_108618101 204
332 3300026035 Ga0207703_10023092 Ga0207703_100230924 204
333 3300026067 Ga0207678_10052699 Ga0207678_100526993 204
334 3300026078 Ga0207702_10025066 Ga0207702_100250663 204
335 3300026089 Ga0207648_10088188 Ga0207648_100881883 204
336 3300026095 Ga0207676_10084345 Ga0207676_100843453 204
337 3300026116 Ga0207674_10008904 Ga0207674_100089046 204
338 3300026121 Ga0207683_10817075 Ga0207683_108170752 204
339 3300026142 Ga0207698_10251703 Ga0207698_102517032 204
340 3300026142 Ga0207698_11123922 Ga0207698_111239221 204
341 3300028379 Ga0268266_10003293 Ga0268266_1000329313 204
342 3300028379 Ga0268266_10088918 Ga0268266_100889183 204
343 3300028381 Ga0268264_10426471 Ga0268264_104264712 204
344 3300044694 Ga0466963_0081829 Ga0466963_0081829_711_1325 204
345 3300045976 Ga0466967_0184278 Ga0466967_0184278_61_675 204
346 3300048905 Ga0496102_0230755 Ga0496102_0230755_1056_1670 204
347 3300048907 Ga0496104_0343891 Ga0496104_0343891_333_947 204
348 3300048908 Ga0496105_0255073 Ga0496105_0255073_763_1377 204
349 3300048910 Ga0496107_0334980 Ga0496107_0334980_262_876 204
350 3300048912 Ga0496109_0035855 Ga0496109_0035855_113_727 204
351 3300048912 Ga0496109_0038597 Ga0496109_0038597_3141_3755 204
352 3300048912 Ga0496109_0057131 Ga0496109_0057131_2126_2740 204
353 3300048912 Ga0496109_0583178 Ga0496109_0583178_379_1014 204
354 3300048913 Ga0496110_0677625 Ga0496110_0677625_154_768 204
355 3300048916 Ga0496113_0015594 Ga0496113_0015594_2015_2629 204
356 3300048917 Ga0496114_0021303 Ga0496114_0021303_2306_2920 204
357 3300048917 Ga0496114_0130600 Ga0496114_0130600_273_887 204
358 3300049571 Ga0501034_0119465 Ga0501034_0119465_1261_2019 204
359 3300049573 Ga0501037_0274730 Ga0501037_0274730_35_793 204
360 3300049575 Ga0501039_0081545 Ga0501039_0081545_1110_1868 204
361 3300049579 Ga0501043_0077532 Ga0501043_0077532_1416_2174 204
362 3300049586 Ga0501070_0463640 Ga0501070_0463640_16_774 204
363 3300049588 Ga0501072_0073285 Ga0501072_0073285_104_862 204
364 3300049589 Ga0501073_0064610 Ga0501073_0064610_892_1650 204
365 3300049590 Ga0501074_0031226 Ga0501074_0031226_1096_1854 204
366 3300049741 Ga0501079_0118424 Ga0501079_0118424_189_803 204
367 3300049742 Ga0501080_0074544 Ga0501080_0074544_1920_2678 204
368 3300049744 Ga0501083_0115388 Ga0501083_0115388_902_1660 204
369 3300049822 Ga0501035_0152732 Ga0501035_0152732_410_1168 204
370 3300049823 Ga0501044_0176432 Ga0501044_0176432_377_1135 204
371 3300054114 Ga0501084_0073899 Ga0501084_0073899_1964_2722 204
372 3300060353 Ga0501082_0065801 Ga0501082_0065801_1187_1945 204

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04545

Sigma70_r4

Sigma-70, region 4

193

242

0.98

PF04542

Sigma70_r2

Sigma-70 region 2

89

158

0.94

PF08281

Sigma70_r4_2

Sigma-70, region 4

187

240

0.94

PF07638

Sigma70_ECF

ECF sigma factor

69

241

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
1je8-assembly2.cif.gz_E two-component response regulator narl/dna complex: dna bending found in a high affinity site 0.9437 147 193
5fgm-assembly1.cif.gz_A streptomyces coelicolor sigr region 4 0.942 140 197
5o8y-assembly1.cif.gz_D conformational dynamism for dna interaction in salmonella typhimurium rcsb response regulator. 0.9404 149 192
4lup-assembly2.cif.gz_C crystal structure of the complex formed by region of e. coli sigmae bound to its -10 element non template strand 0.927 26 112
5or5-assembly1.cif.gz_A nmr structure of the complex formed by an engineered region 2 of sigmae in complex with gtaaaa 0.9201 23 106
ID Description Score Start End Superfamily
af_P9WGH7_10_94_1.10.1740.10 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9962 23 105 1.10.1740.10
4nqwA01 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9706 23 105 1.10.1740.10
af_P9WGH7_10_94_1.10.1740.10 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9615 23 105 1.10.1740.10
3vdoA01 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9603 23 105 1.10.1740.10
4nqwA01 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9372 23 105 1.10.1740.10
ID Description Score Start End GO Terms
AF-A0A6I6FFC1-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.5659 20 198 GO:0003677
GO:0006352
GO:0016987
AF-K0ETH6-F1-model_v4 RNA polymerase sigma factor SigK 0.5648 20 198 GO:0003677
GO:0006352
GO:0016987
AF-A0A378GZ92-F1-model_v4 deleted 0.5647 17 198
AF-A0A562VAR2-F1-model_v4 RNA polymerase sigma-70 factor (ECF subfamily) 0.5586 18 198 GO:0003677
GO:0006352
GO:0016987
AF-A0A101RLE1-F1-model_v4 RNA polymerase subunit sigma 0.5565 24 199 GO:0003677
GO:0006352
GO:0016987

Feature Viewer

pLDDT pTM Quality
86.9 0.51 Medium
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Predicted Structure (AlphaFold2)

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