F424666

General Info

Members Datasets Scaffolds Average Seq Length
368 239 325 277

Family's Representative Sequence

Representative Sequence 3300006946|Ga0079104_1001120|Ga0079104_100112017
Length 307
Sequence MNQIRNQNGMLYCIMIKYKLSNNKSEAIFMKKRNWLITGVSSGFGRQLSEQILECGDCVIGTVRNEAKVADLIEKYPETFICEILDVTDTSAIHEVVECSFKKLGHIDVIISNAGYGLFGAAEELSDAEIDVIIATNLTGSIQLIKSSLPHLRAQGGGRIIQISSYGGQVAFPGNSLYHATKFGIEGFVEAVAQEVAPFGIGMTIVEPGGARTEFRYGSAKVTNLMPEYDGNPAHSFLKMLDPANGLAPGNPALMATRIIESVDIEPAPLRMVLGSQALSSTISTLKARIADFETQKELAASTDYAE

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
3 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
4 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
5 2508501039 Frankia saprophytica CN3 Isolate Nodule
6 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
7 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
8 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
9 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
10 2511231025 Pantoea sp. YR343 Isolate Rhizosphere
11 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
12 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
13 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
14 2648501693 Pantoea ananatis B1-9 Isolate Rhizosphere
15 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
16 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
17 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
18 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
19 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
20 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
21 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
22 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
23 2876601092 Pantoea endophytica 596 Isolate Unclassified
24 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
25 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
26 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
27 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
28 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
29 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
30 2935625433 Kosakonia sp. 1610 Isolate Rhizosphere
31 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
32 2939617950 Kosakonia cowanii 2056 Isolate Rhizosphere
33 2974435778 Kosakonia cowanii SORGH_AS 304 Isolate Unclassified
34 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
35 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
36 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
37 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
39 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
40 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
41 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
42 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
43 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
44 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
45 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
46 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
47 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
48 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
49 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
50 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
51 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
52 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
53 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
54 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
55 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
56 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
57 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
58 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
59 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
60 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
61 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
62 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
63 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
64 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
65 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
66 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
67 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
68 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
69 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
70 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
71 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
72 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
73 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
74 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
75 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
76 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
77 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
78 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
79 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
80 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
81 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
82 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
83 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
84 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
85 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
86 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
87 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
88 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
89 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
90 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
91 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
92 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
93 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
94 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
95 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
96 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
102 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
106 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
107 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
108 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
111 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
130 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
133 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
134 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
135 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
136 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
137 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
138 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
139 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
140 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
141 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
142 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
143 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
144 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
145 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
146 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
147 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
148 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
149 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
150 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
151 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
152 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
153 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
154 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
155 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
156 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
157 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
158 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
159 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
160 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
161 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
162 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
163 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
164 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
165 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
166 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
167 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
168 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
169 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
170 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
171 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
172 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
173 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
174 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
175 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
176 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
177 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
178 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
179 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
180 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
181 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
182 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
183 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
184 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
185 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
186 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
187 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
188 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
189 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
190 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
191 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
192 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
193 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
194 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
195 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
196 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
197 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
198 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
199 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
200 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
201 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
202 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
203 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
204 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
205 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
206 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
207 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
208 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
209 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
210 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
211 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
212 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
213 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
214 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
215 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
216 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
217 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
218 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
219 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
220 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
221 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
222 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
223 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
224 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
225 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
226 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
227 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
228 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
229 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
230 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
231 8016733728 Pantoea sp. SORGH_AS 659 Isolate Unclassified
232 8019499862 Kluyvera sp. 1366 Isolate Rhizosphere
233 8019504834 Atlantibacter hermannii 1903 Isolate Rhizosphere
234 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
235 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
236 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
237 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
238 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
239 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 88.04
Metatranscriptomes 0.27
Isolates 11.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.05
Nodule 2.72
Rhizoplane 3.26
Rhizosphere 63.32
Stem 0
Stem Tuber 0
Unclassified 20.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3016661 2162886007 Bacteria 22822
2 JGI25156J39149_1001323 3300002705 Bacteria 10706
3 JGI25165J46597_1000884 3300003214 Bacteria 21125
4 JGI25160J50197_1012562 3300003354 Bacteria 2932
5 JGI25404J52841_10031202 3300003659 Bacteria 1139
6 Ga0055539_1000019 3300003752 Bacteria 341727
7 Ga0055533_1000023 3300003756 Bacteria 341727
8 Ga0055533_1000064 3300003756 Bacteria 169672
9 Ga0055532_1000013 3300003758 Bacteria 380677
10 Ga0055532_1006280 3300003758 Bacteria 1599
11 Ga0055525_1000125 3300003759 Bacteria 115822
12 Ga0055527_1000010 3300003760 Bacteria 380677
13 Ga0055535_1000010 3300003761 Bacteria 380677
14 Ga0055542_1000016 3300003762 Bacteria 380677
15 Ga0055529_1000012 3300003763 Bacteria 380677
16 Ga0055541_1002011 3300003841 Bacteria 4171
17 Ga0058692_1000553 3300003856 Bacteria 15967
18 Ga0058692_1000572 3300003856 Bacteria 15649
19 Ga0058692_1002086 3300003856 Bacteria 6898
20 Ga0058859_11787734 3300004798 Bacteria 1680
21 Ga0065704_10070278 3300005289 Bacteria 40699
22 Ga0070670_100007904 3300005331 Bacteria 9050
23 Ga0070670_100230394 3300005331 Bacteria 1612
24 Ga0070682_100076570 3300005337 Bacteria 2154
25 Ga0070682_100334103 3300005337 Bacteria 1124
26 Ga0070682_100425174 3300005337 Bacteria 1011
27 Ga0068868_100076964 3300005338 Bacteria 2668
28 Ga0070668_100316252 3300005347 Bacteria 1313
29 Ga0070671_100077395 3300005355 Unclassified 2780
30 Ga0070659_100340605 3300005366 Bacteria 1256
31 Ga0070667_100271863 3300005367 Bacteria 1520
32 Ga0070714_100555015 3300005435 Bacteria 1100
33 Ga0070701_10231497 3300005438 Bacteria 1107
34 Ga0070700_100031246 3300005441 Bacteria 3189
35 Ga0070700_100476512 3300005441 Bacteria 955
36 Ga0070708_100011187 3300005445 Bacteria 7298
37 Ga0070678_100303130 3300005456 Bacteria 1358
38 Ga0068867_100156224 3300005459 Bacteria 1796
39 Ga0070685_10025298 3300005466 Bacteria 3268
40 Ga0070706_100006042 3300005467 Bacteria 11441
41 Ga0070706_100017045 3300005467 Bacteria 6710
42 Ga0070706_100081847 3300005467 Bacteria 2990
43 Ga0070706_100432389 3300005467 Bacteria 1225
44 Ga0070707_100024173 3300005468 Bacteria 5751
45 Ga0070707_100053222 3300005468 Bacteria 3880
46 Ga0070707_100053783 3300005468 Bacteria 3860
47 Ga0070707_100085026 3300005468 Bacteria 3057
48 Ga0070698_100034353 3300005471 Bacteria 5249
49 Ga0070698_100040748 3300005471 Bacteria 4772
50 Ga0070698_100059095 3300005471 Bacteria 3873
51 Ga0070698_100061928 3300005471 Bacteria 3775
52 Ga0070699_100169580 3300005518 Bacteria 1934
53 Ga0070684_100203411 3300005535 Bacteria 1804
54 Ga0070665_100099152 3300005548 Unclassified 2918
55 Ga0070665_100136688 3300005548 Bacteria 2454
56 Ga0070665_100208620 3300005548 Bacteria 1954
57 Ga0070664_100109463 3300005564 Bacteria 2410
58 Ga0068863_100473412 3300005841 Bacteria 1231
59 Ga0068858_100009037 3300005842 Bacteria 9528
60 Ga0068858_100219444 3300005842 Bacteria 1801
61 Ga0081540_1000579 3300005983 Bacteria 35373
62 Ga0081540_1003263 3300005983 Bacteria 12889
63 Ga0070717_10021377 3300006028 Bacteria 5098
64 Ga0070717_10446215 3300006028 Bacteria 1166
65 Ga0075364_10289861 3300006051 Bacteria 1114
66 Ga0070712_100111055 3300006175 Bacteria 2046
67 Ga0079104_1000029 3300006946 Bacteria 207648
68 Ga0079104_1001120 3300006946 Bacteria 19674
69 Ga0105251_10000041 3300009011 Bacteria 115207
70 Ga0105251_10004864 3300009011 Bacteria 8966
71 Ga0105244_10002594 3300009036 Bacteria 13567
72 Ga0105240_10218276 3300009093 Unclassified 2223
73 Ga0111539_10701245 3300009094 Bacteria 1178
74 Ga0105245_10041400 3300009098 Bacteria 4107
75 Ga0105247_10021042 3300009101 Bacteria 3924
76 Ga0105247_10065135 3300009101 Unclassified 2266
77 Ga0105242_10139473 3300009176 Bacteria 2102
78 Ga0105237_10203377 3300009545 Unclassified 1981
79 Ga0105249_10125900 3300009553 Bacteria 2440
80 Ga0105249_10277166 3300009553 Bacteria 1673
81 Ga0105239_10158462 3300010375 Bacteria 2528
82 Ga0105239_10741237 3300010375 Bacteria 1124
83 Ga0105246_10003416 3300011119 Bacteria 9625
84 Ga0105246_10024387 3300011119 Bacteria 3930
85 Ga0157373_10001073 3300013100 Bacteria 21014
86 Ga0157371_10002462 3300013102 Bacteria 17638
87 Ga0157369_10003937 3300013105 Bacteria 17623
88 Ga0163162_10013235 3300013306 Bacteria 8057
89 Ga0157372_10001072 3300013307 Bacteria 29895
90 Ga0157372_10001224 3300013307 Bacteria 27781
91 Ga0157372_10020555 3300013307 Bacteria 7123
92 Ga0157372_10627881 3300013307 Bacteria 1252
93 Ga0163163_10279133 3300014325 Bacteria 1722
94 Ga0182006_1000050 3300015261 Bacteria 183308
95 Ga0209566_100031 3300025225 Bacteria 341555
96 Ga0209674_100001 3300025226 Bacteria 4013750
97 Ga0209674_100011 3300025226 Bacteria 997175
98 Ga0209672_100002 3300025228 Bacteria 1733325
99 Ga0209147_100003 3300025229 Bacteria 1733325
100 Ga0209147_100193 3300025229 Bacteria 69946
101 Ga0209563_100001 3300025230 Bacteria 4013775
102 Ga0209563_100282 3300025230 Bacteria 21269
103 Ga0207427_101734 3300025231 Bacteria 7170
104 Ga0209258_100042 3300025242 Bacteria 380729
105 Ga0209677_100001 3300025253 Bacteria 4013787
106 Ga0209148_1000006 3300025254 Bacteria 1733325
107 Ga0209759_1000210 3300025256 Bacteria 90325
108 Ga0209129_1000018 3300025258 Bacteria 469298
109 Ga0209233_1000033 3300025261 Bacteria 596094
110 Ga0209455_1000003 3300025272 Bacteria 1471893
111 Ga0209130_1001730 3300025284 Bacteria 13050
112 Ga0207426_1000113 3300025302 Bacteria 228304
113 Ga0207696_1004192 3300025711 Bacteria 6276
114 Ga0207655_1002714 3300025728 Bacteria 13846
115 Ga0207713_1000776 3300025735 Bacteria 29490
116 Ga0207713_1008733 3300025735 Bacteria 5783
117 Ga0207710_10115803 3300025900 Bacteria 1276
118 Ga0207710_10134095 3300025900 Bacteria 1191
119 Ga0207684_10017040 3300025910 Bacteria 6240
120 Ga0207684_10017449 3300025910 Bacteria 6157
121 Ga0207684_10055085 3300025910 Bacteria 3374
122 Ga0207684_10232687 3300025910 Bacteria 1590
123 Ga0207695_10032247 3300025913 Bacteria 5736
124 Ga0207695_10684891 3300025913 Bacteria 906
125 Ga0207646_10002185 3300025922 Bacteria 23323
126 Ga0207646_10015012 3300025922 Bacteria 7332
127 Ga0207646_10019286 3300025922 Bacteria 6340
128 Ga0207650_10063763 3300025925 Bacteria 2756
129 Ga0207650_10147082 3300025925 Bacteria 1857
130 Ga0207687_10024518 3300025927 Bacteria 4031
131 Ga0207690_10109096 3300025932 Bacteria 1990
132 Ga0207686_10235011 3300025934 Bacteria 1331
133 Ga0207712_10190082 3300025961 Bacteria 1620
134 Ga0207677_10104117 3300026023 Bacteria 2097
135 Ga0207703_10000518 3300026035 Bacteria 39574
136 Ga0207678_10202344 3300026067 Bacteria 1698
137 Ga0207708_10165480 3300026075 Bacteria 1748
138 Ga0207708_10177189 3300026075 Bacteria 1691
139 Ga0207641_10372767 3300026088 Bacteria 1365
140 Ga0207675_100023329 3300026118 Bacteria 5755
141 Ga0209281_1000051 3300027111 Bacteria 319152
142 Ga0209281_1000114 3300027111 Bacteria 210536
143 Ga0209281_1000118 3300027111 Bacteria 208448
144 Ga0209371_1000041 3300027312 Bacteria 340377
145 Ga0209371_1000093 3300027312 Bacteria 171050
146 Ga0209371_1001424 3300027312 Bacteria 16308
147 Ga0209371_1001798 3300027312 Bacteria 13397
148 Ga0209371_1006154 3300027312 Bacteria 4537
149 Ga0209371_1007679 3300027312 Bacteria 3711
150 Ga0268266_10108693 3300028379 Bacteria 2454
151 Ga0265334_10010530 3300028573 Bacteria 3904
152 Ga0265334_10030073 3300028573 Bacteria 2175
153 Ga0265318_10007993 3300028577 Bacteria 4742
154 Ga0265318_10016852 3300028577 Bacteria 3010
155 Ga0265323_10007680 3300028653 Bacteria 4465
156 Ga0265323_10008468 3300028653 Bacteria 4240
157 Ga0307515_10062286 3300028794 Bacteria 5272
158 Ga0265338_10030730 3300028800 Bacteria 5281
159 Ga0265338_10043578 3300028800 Bacteria 4159
160 Ga0268256_1000002 3300030500 Bacteria 1535763
161 Ga0268256_1000003 3300030500 Bacteria 1289401
162 Ga0268256_1000081 3300030500 Bacteria 171742
163 Ga0268256_1001170 3300030500 Bacteria 16901
164 Ga0268256_1002026 3300030500 Bacteria 10942
165 Ga0268256_1002642 3300030500 Bacteria 8882
166 Ga0268256_1006131 3300030500 Bacteria 4537
167 Ga0268256_1039038 3300030500 Bacteria 1075
168 Ga0265330_10049904 3300031235 Bacteria 1836
169 Ga0265332_10037891 3300031238 Bacteria 2091
170 Ga0265316_10010404 3300031344 Bacteria 8481
171 Ga0265316_10014471 3300031344 Bacteria 6938
172 Ga0265316_10023871 3300031344 Bacteria 5135
173 Ga0265316_10105629 3300031344 Bacteria 2137
174 Ga0307513_10026563 3300031456 Bacteria 6672
175 Ga0307509_10213937 3300031507 Bacteria 1749
176 Ga0265314_10094060 3300031711 Bacteria 1944
177 Ga0265342_10006458 3300031712 Bacteria 8731
178 Ga0265342_10148522 3300031712 Bacteria 1303
179 Ga0265342_10180075 3300031712 Bacteria 1158
180 Ga0307516_10000351 3300031730 Bacteria 59823
181 Ga0307516_10102058 3300031730 Bacteria 2684
182 Ga0307518_10033996 3300031838 Bacteria 3701
183 Ga0307412_10000083 3300031911 Bacteria 91374
184 Ga0307409_100528427 3300031995 Bacteria 1154
185 Ga0307415_100674303 3300032126 Bacteria 930
186 Ga0307507_10174616 3300033179 Unclassified 1552
187 Ga0373925_0000108 3300037068 Bacteria 89540
188 Ga0395899_0030184 3300037312 Bacteria 4077
189 Ga0395900_0067341 3300037418 Bacteria 3679
190 Ga0395905_0070799 3300037471 Bacteria 3269
191 Ga0439438_007474 3300041405 Bacteria 3732
192 Ga0439438_014278 3300041405 Bacteria 2368
193 Ga0439438_061308 3300041405 Bacteria 941
194 Ga0439438_065987 3300041405 Bacteria 900
195 Ga0439447_012355 3300041407 Bacteria 2456
196 Ga0439452_000007 3300042010 Bacteria 613625
197 Ga0439452_000008 3300042010 Bacteria 569877
198 Ga0466963_0000366 3300044694 Bacteria 20514
199 Ga0466963_0019332 3300044694 Bacteria 4270
200 Ga0466958_0024530 3300045836 Bacteria 3549
201 Ga0495617_002948 3300046452 Bacteria 6521
202 Ga0495592_0029184 3300046454 Bacteria 4176
203 Ga0495591_000111 3300046458 Bacteria 93733
204 Ga0495629_0000015 3300046459 Bacteria 182026
205 Ga0495629_0284849 3300046459 Bacteria 1133
206 Ga0495651_0084651 3300046462 Bacteria 2389
207 Ga0495653_0000764 3300046463 Bacteria 24684
208 Ga0495653_0313764 3300046463 Bacteria 1018
209 Ga0495580_0109119 3300046472 Bacteria 1921
210 Ga0495662_0066291 3300046476 Bacteria 1746
211 Ga0495596_0003359 3300046500 Bacteria 8131
212 Ga0495607_0000101 3300046501 Bacteria 91495
213 Ga0495606_0016895 3300046507 Bacteria 5540
214 Ga0495606_0034521 3300046507 Bacteria 3472
215 Ga0495606_0075666 3300046507 Bacteria 2106
216 Ga0495610_0002628 3300046512 Bacteria 14855
217 Ga0495610_0003664 3300046512 Bacteria 11821
218 Ga0495618_0022043 3300046514 Bacteria 3930
219 Ga0495620_0004604 3300046515 Bacteria 7752
220 Ga0495628_0009721 3300046516 Bacteria 8204
221 Ga0495628_0023248 3300046516 Bacteria 5089
222 Ga0495628_0026431 3300046516 Bacteria 4732
223 Ga0495631_0048439 3300046518 Bacteria 1863
224 Ga0495632_0030908 3300046519 Bacteria 2775
225 Ga0495637_0009178 3300046520 Bacteria 4828
226 Ga0495643_0000650 3300046522 Bacteria 41088
227 Ga0495643_0026735 3300046522 Bacteria 3251
228 Ga0495652_0076433 3300046529 Bacteria 2778
229 Ga0495654_0000480 3300046530 Bacteria 33030
230 Ga0495668_0022500 3300046616 Bacteria 3603
231 Ga0495635_0035424 3300046663 Bacteria 3460
232 Ga0495657_0000530 3300046675 Bacteria 35507
233 Ga0495657_0072392 3300046675 Bacteria 2248
234 Ga0495646_0018018 3300046680 Bacteria 4472
235 Ga0495646_0308643 3300046680 Bacteria 835
236 Ga0495613_0005407 3300046689 Bacteria 9595
237 Ga0495613_0132494 3300046689 Bacteria 1784
238 Ga0495624_0012761 3300046690 Bacteria 5736
239 Ga0495649_0045276 3300046694 Bacteria 2399
240 Ga0495600_0016211 3300046809 Bacteria 4725
241 Ga0495604_0003124 3300047317 Bacteria 13238
242 Ga0495604_0031764 3300047317 Bacteria 4188
243 Ga0495674_0018888 3300047319 Bacteria 6411
244 Ga0495676_0108824 3300047321 Bacteria 2038
245 Ga0495680_0009725 3300047322 Bacteria 8630
246 Ga0495683_0008141 3300047323 Bacteria 5627
247 Ga0495687_007813 3300047443 Bacteria 6227
248 Ga0495675_0262360 3300047444 Bacteria 1034
249 Ga0495673_0000201 3300047469 Bacteria 92885
250 Ga0495681_0069282 3300047470 Bacteria 1602
251 Ga0495686_0000045 3300047472 Bacteria 284761
252 Ga0495686_0007917 3300047472 Bacteria 7892
253 Ga0495686_0054113 3300047472 Bacteria 2514
254 Ga0495593_0000415 3300047673 Bacteria 23674
255 Ga0495593_0093079 3300047673 Bacteria 1551
256 Ga0495602_0039575 3300048088 Bacteria 4339
257 Ga0496100_0061795 3300048903 Bacteria 2469
258 Ga0496101_0000048 3300048904 Bacteria 146537
259 Ga0496101_0121742 3300048904 Bacteria 1973
260 Ga0496101_0373383 3300048904 Bacteria 1122
261 Ga0496102_0153984 3300048905 Bacteria 2161
262 Ga0496106_0338347 3300048909 Bacteria 1208
263 Ga0496107_0229871 3300048910 Bacteria 1380
264 Ga0496108_0000007 3300048911 Bacteria 351492
265 Ga0496108_0107616 3300048911 Bacteria 2381
266 Ga0496109_0320158 3300048912 Bacteria 1463
267 Ga0496114_0536924 3300048917 Bacteria 1034
268 Ga0496116_0008397 3300048919 Bacteria 8967
269 Ga0496116_0010345 3300048919 Bacteria 7833
270 Ga0496116_0040106 3300048919 Bacteria 3228
271 Ga0496116_0072633 3300048919 Bacteria 2173
272 Ga0496117_0000012 3300048920 Bacteria 608530
273 Ga0496117_0000377 3300048920 Bacteria 76950
274 Ga0496117_0017778 3300048920 Bacteria 5926
275 Ga0496117_0018466 3300048920 Bacteria 5771
276 Ga0496117_0029918 3300048920 Bacteria 4189
277 Ga0496117_0111850 3300048920 Bacteria 1699
278 Ga0496118_0000051 3300048921 Bacteria 241198
279 Ga0496118_0000886 3300048921 Bacteria 47174
280 Ga0496118_0006323 3300048921 Bacteria 13086
281 Ga0496118_0024539 3300048921 Bacteria 5199
282 Ga0496118_0044525 3300048921 Bacteria 3474
283 Ga0496118_0134710 3300048921 Unclassified 1579
284 Ga0496119_0000005 3300048922 Bacteria 529799
285 Ga0496119_0000066 3300048922 Bacteria 162680
286 Ga0496119_0000140 3300048922 Bacteria 101373
287 Ga0496119_0053910 3300048922 Bacteria 2452
288 Ga0496120_0000005 3300048923 Bacteria 529797
289 Ga0496120_0000011 3300048923 Bacteria 365549
290 Ga0496120_0004662 3300048923 Bacteria 11328
291 Ga0496120_0226680 3300048923 Bacteria 890
292 Ga0496121_0084333 3300048924 Bacteria 2505
293 Ga0496122_0000253 3300048925 Bacteria 120534
294 Ga0496122_0001810 3300048925 Bacteria 32761
295 Ga0496122_0028955 3300048925 Bacteria 4684
296 Ga0496122_0253010 3300048925 Bacteria 983
297 Ga0496123_0000206 3300048926 Bacteria 120598
298 Ga0496123_0002731 3300048926 Bacteria 21150
299 Ga0496124_0000148 3300048927 Bacteria 144782
300 Ga0496124_0000283 3300048927 Bacteria 96433
301 Ga0496124_0015594 3300048927 Bacteria 7273
302 Ga0496124_0088650 3300048927 Bacteria 2528
303 Ga0496124_0159378 3300048927 Bacteria 1761
304 Ga0496124_0219168 3300048927 Bacteria 1432
305 Ga0496125_0000194 3300048928 Bacteria 130058
306 Ga0496125_0012534 3300048928 Bacteria 8408
307 Ga0496126_0001749 3300048929 Bacteria 32179
308 Ga0496126_0005615 3300048929 Bacteria 14263
309 Ga0496126_0014349 3300048929 Bacteria 8013
310 Ga0496126_0032215 3300048929 Unclassified 4941
311 Ga0496126_0042672 3300048929 Bacteria 4187
312 Ga0496126_0104024 3300048929 Bacteria 2480
313 Ga0496126_0110625 3300048929 Bacteria 2393
314 Ga0501031_0074948 3300049568 Bacteria 2203
315 Ga0501034_0442552 3300049571 Bacteria 1218
316 Ga0501038_0306014 3300049574 Bacteria 1246
317 Ga0501047_0019596 3300049581 Bacteria 6491
318 Ga0501044_0046450 3300049823 Bacteria 4495
319 nmdc:mga00v17_240596_c1 3300050491 Bacteria 1173
320 Ga0495619_0356169 3300053085 Bacteria 1012
321 Ga0500556_0000061 3300053104 Bacteria 111417
322 Ga0500618_000292 3300053125 Bacteria 38090
323 Ga0500590_000200 3300053148 Bacteria 18250
324 Ga0500636_0049297 3300053177 Bacteria 2478
325 Ga0500636_0236339 3300053177 Bacteria 941

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048925 Ga0496122_0253010 Ga0496122_0253010_240_959 237
2 3300003856 Ga0058692_1002086 Ga0058692_10020863 241
3 3300005331 Ga0070670_100230394 Ga0070670_1002303942 242
4 3300006051 Ga0075364_10289861 Ga0075364_102898611 242
5 3300025925 Ga0207650_10063763 Ga0207650_100637633 242
6 3300005983 Ga0081540_1000579 Ga0081540_10005797 243
7 3300009094 Ga0111539_10701245 Ga0111539_107012452 245
8 3300031238 Ga0265332_10037891 Ga0265332_100378911 245
9 3300046463 Ga0495653_0313764 Ga0495653_0313764_238_981 246
10 3300046680 Ga0495646_0308643 Ga0495646_0308643_54_797 246
11 3300048929 Ga0496126_0005615 Ga0496126_0005615_2760_3629 246
12 3300037471 Ga0395905_0070799 Ga0395905_0070799_1066_1938 250
13 3300048911 Ga0496108_0000007 Ga0496108_0000007_189326_190129 250
14 3300005548 Ga0070665_100208620 Ga0070665_1002086201 254
15 3300048919 Ga0496116_0010345 Ga0496116_0010345_3929_4741 254
16 3300048920 Ga0496117_0000012 Ga0496117_0000012_433444_434256 254
17 3300048921 Ga0496118_0000051 Ga0496118_0000051_64560_65372 254
18 3300048924 Ga0496121_0084333 Ga0496121_0084333_1150_1962 254
19 3300048927 Ga0496124_0219168 Ga0496124_0219168_272_1084 254
20 3300048929 Ga0496126_0042672 Ga0496126_0042672_1174_1986 254
21 3300053104 Ga0500556_0000061 Ga0500556_0000061_74060_74899 254
22 3300026075 Ga0207708_10165480 Ga0207708_101654801 255
23 3300005548 Ga0070665_100136688 Ga0070665_1001366883 256
24 3300028379 Ga0268266_10108693 Ga0268266_101086933 256
25 iso_pu_bacteria 2501025501 2501069711 256
26 iso_pu_bacteria 2510917015 2511108551 256
27 3300002705 JGI25156J39149_1001323 JGI25156J39149_100132310 257
28 3300003214 JGI25165J46597_1000884 JGI25165J46597_100088417 257
29 3300003752 Ga0055539_1000019 Ga0055539_100001968 257
30 3300003756 Ga0055533_1000023 Ga0055533_1000023255 257
31 3300003756 Ga0055533_1000064 Ga0055533_100006492 257
32 3300003758 Ga0055532_1000013 Ga0055532_1000013278 257
33 3300003758 Ga0055532_1006280 Ga0055532_10062802 257
34 3300003759 Ga0055525_1000125 Ga0055525_100012552 257
35 3300003760 Ga0055527_1000010 Ga0055527_100001092 257
36 3300003761 Ga0055535_1000010 Ga0055535_1000010278 257
37 3300003762 Ga0055542_1000016 Ga0055542_1000016278 257
38 3300003763 Ga0055529_1000012 Ga0055529_1000012278 257
39 3300003841 Ga0055541_1002011 Ga0055541_10020112 257
40 3300005842 Ga0068858_100009037 Ga0068858_1000090373 257
41 3300009011 Ga0105251_10004864 Ga0105251_100048645 257
42 3300009036 Ga0105244_10002594 Ga0105244_100025946 257
43 3300009101 Ga0105247_10065135 Ga0105247_100651352 257
44 3300011119 Ga0105246_10003416 Ga0105246_100034164 257
45 3300013100 Ga0157373_10001073 Ga0157373_1000107312 257
46 3300013102 Ga0157371_10002462 Ga0157371_1000246211 257
47 3300015261 Ga0182006_1000050 Ga0182006_100005094 257
48 3300025225 Ga0209566_100031 Ga0209566_100031258 257
49 3300025226 Ga0209674_100001 Ga0209674_1000011896 257
50 3300025226 Ga0209674_100011 Ga0209674_10001191 257
51 3300025228 Ga0209672_100002 Ga0209672_10000290 257
52 3300025229 Ga0209147_100003 Ga0209147_10000390 257
53 3300025229 Ga0209147_100193 Ga0209147_10019364 257
54 3300025230 Ga0209563_100001 Ga0209563_1000011896 257
55 3300025230 Ga0209563_100282 Ga0209563_10028212 257
56 3300025231 Ga0207427_101734 Ga0207427_1017342 257
57 3300025242 Ga0209258_100042 Ga0209258_100042270 257
58 3300025253 Ga0209677_100001 Ga0209677_1000011896 257
59 3300025254 Ga0209148_1000006 Ga0209148_100000690 257
60 3300025256 Ga0209759_1000210 Ga0209759_100021076 257
61 3300025261 Ga0209233_1000033 Ga0209233_1000033457 257
62 3300025272 Ga0209455_1000003 Ga0209455_100000390 257
63 3300025711 Ga0207696_1004192 Ga0207696_10041925 257
64 3300025728 Ga0207655_1002714 Ga0207655_10027148 257
65 3300025735 Ga0207713_1008733 Ga0207713_10087334 257
66 3300025913 Ga0207695_10684891 Ga0207695_106848911 257
67 3300026035 Ga0207703_10000518 Ga0207703_1000051829 257
68 3300027312 Ga0209371_1007679 Ga0209371_10076792 257
69 3300028800 Ga0265338_10043578 Ga0265338_100435783 257
70 3300031344 Ga0265316_10105629 Ga0265316_101056292 257
71 3300031911 Ga0307412_10000083 Ga0307412_100000836 257
72 3300033179 Ga0307507_10174616 Ga0307507_101746162 257
73 3300037068 Ga0373925_0000108 Ga0373925_0000108_18482_19321 257
74 3300037312 Ga0395899_0030184 Ga0395899_0030184_1056_1841 257
75 3300037418 Ga0395900_0067341 Ga0395900_0067341_1356_2141 257
76 3300041405 Ga0439438_014278 Ga0439438_014278_1560_2333 257
77 3300041405 Ga0439438_061308 Ga0439438_061308_92_916 257
78 3300041405 Ga0439438_065987 Ga0439438_065987_36_809 257
79 3300042010 Ga0439452_000007 Ga0439452_000007_517373_518197 257
80 3300044694 Ga0466963_0019332 Ga0466963_0019332_727_1566 257
81 3300045836 Ga0466958_0024530 Ga0466958_0024530_1614_2390 257
82 3300046452 Ga0495617_002948 Ga0495617_002948_2814_3635 257
83 3300046454 Ga0495592_0029184 Ga0495592_0029184_1390_2226 257
84 3300046458 Ga0495591_000111 Ga0495591_000111_12287_13108 257
85 3300046462 Ga0495651_0084651 Ga0495651_0084651_770_1606 257
86 3300046507 Ga0495606_0016895 Ga0495606_0016895_2776_3603 257
87 3300046507 Ga0495606_0075666 Ga0495606_0075666_223_1050 257
88 3300046514 Ga0495618_0022043 Ga0495618_0022043_1087_1923 257
89 3300046516 Ga0495628_0009721 Ga0495628_0009721_4972_5808 257
90 3300046516 Ga0495628_0026431 Ga0495628_0026431_1112_1939 257
91 3300046529 Ga0495652_0076433 Ga0495652_0076433_309_1145 257
92 3300046530 Ga0495654_0000480 Ga0495654_0000480_30254_31075 257
93 3300046616 Ga0495668_0022500 Ga0495668_0022500_2743_3564 257
94 3300046663 Ga0495635_0035424 Ga0495635_0035424_1063_1899 257
95 3300046675 Ga0495657_0000530 Ga0495657_0000530_9193_10029 257
96 3300046689 Ga0495613_0005407 Ga0495613_0005407_2974_3810 257
97 3300046694 Ga0495649_0045276 Ga0495649_0045276_623_1450 257
98 3300047317 Ga0495604_0031764 Ga0495604_0031764_2322_3158 257
99 3300047322 Ga0495680_0009725 Ga0495680_0009725_6452_7288 257
100 3300047323 Ga0495683_0008141 Ga0495683_0008141_1547_2374 257
101 3300047443 Ga0495687_007813 Ga0495687_007813_2990_3817 257
102 3300047444 Ga0495675_0262360 Ga0495675_0262360_95_922 257
103 3300047673 Ga0495593_0093079 Ga0495593_0093079_371_1207 257
104 3300048088 Ga0495602_0039575 Ga0495602_0039575_1220_2047 257
105 3300048903 Ga0496100_0061795 Ga0496100_0061795_488_1309 257
106 3300048904 Ga0496101_0000048 Ga0496101_0000048_121558_122379 257
107 3300048919 Ga0496116_0040106 Ga0496116_0040106_2368_3189 257
108 3300048920 Ga0496117_0017778 Ga0496117_0017778_1821_2642 257
109 3300048921 Ga0496118_0134710 Ga0496118_0134710_557_1384 257
110 3300048922 Ga0496119_0053910 Ga0496119_0053910_38_811 257
111 3300048923 Ga0496120_0004662 Ga0496120_0004662_9048_9869 257
112 3300048925 Ga0496122_0001810 Ga0496122_0001810_8603_9469 257
113 3300048926 Ga0496123_0002731 Ga0496123_0002731_6800_7621 257
114 3300048927 Ga0496124_0088650 Ga0496124_0088650_588_1409 257
115 3300048928 Ga0496125_0000194 Ga0496125_0000194_129018_129845 257
116 3300048929 Ga0496126_0001749 Ga0496126_0001749_13838_14665 257
117 3300048929 Ga0496126_0014349 Ga0496126_0014349_6165_6986 257
118 3300048929 Ga0496126_0032215 Ga0496126_0032215_3252_4079 257
119 3300048929 Ga0496126_0110625 Ga0496126_0110625_1279_2100 257
120 3300050491 nmdc:mga00v17_240596_c1 nmdc:mga00v17_240596_c1_57_878 257
121 iso_pu_bacteria 2501025502 2501080772 257
122 iso_pu_bacteria 2501025504 2501409415 257
123 iso_pu_bacteria 2501025504 2501412274 257
124 iso_pu_bacteria 2510065045 2510246465 257
125 iso_pu_bacteria 2510917013 2511086790 257
126 iso_pu_bacteria 2510917014 2511098965 257
127 iso_pu_bacteria 2510917014 2511101589 257
128 iso_pu_bacteria 2511231025 2511381535 257
129 iso_pu_bacteria 2582581314 2585311783 257
130 iso_pu_bacteria 2718217991 2719644212 257
131 iso_pu_bacteria 2751185725 2753039735 257
132 iso_pu_bacteria 2751185792 2753328303 257
133 iso_pu_bacteria 2791355406 2793979911 257
134 iso_pu_bacteria 2856287931 2856288510 257
135 iso_pu_bacteria 2857357740 2857367063 257
136 iso_pu_bacteria 2876601092 2876601727 257
137 iso_pu_bacteria 2877676314 2877677170 257
138 iso_pu_bacteria 2904483920 2904485840 257
139 iso_pu_bacteria 2919527303 2919532607 257
140 iso_pu_bacteria 2939602548 2939607009 257
141 iso_pu_bacteria 8016733728 8016734004 257
142 iso_pu_bacteria 8019499862 8019504170 257
143 iso_pu_bacteria 8047893842 8047900431 257
144 iso_pu_bacteria 8048356638 8048358472 257
145 iso_pu_bacteria 8048369669 8048377371 257
146 iso_pu_bacteria 8048379754 8048386468 257
147 iso_pu_bacteria 8055301274 8055307064 257
148 2162886007 SwRhRL2b_contig_3016661 SwRhRL2b_0329.00007070 258
149 3300003354 JGI25160J50197_1012562 JGI25160J50197_10125624 258
150 3300003659 JGI25404J52841_10031202 JGI25404J52841_100312021 258
151 3300003856 Ga0058692_1000553 Ga0058692_10005539 258
152 3300003856 Ga0058692_1000572 Ga0058692_10005723 258
153 3300004798 Ga0058859_11787734 Ga0058859_117877342 258
154 3300005289 Ga0065704_10070278 Ga0065704_1007027829 258
155 3300005331 Ga0070670_100007904 Ga0070670_10000790413 258
156 3300005337 Ga0070682_100076570 Ga0070682_1000765703 258
157 3300005337 Ga0070682_100334103 Ga0070682_1003341032 258
158 3300005337 Ga0070682_100425174 Ga0070682_1004251741 258
159 3300005338 Ga0068868_100076964 Ga0068868_1000769642 258
160 3300005347 Ga0070668_100316252 Ga0070668_1003162522 258
161 3300005355 Ga0070671_100077395 Ga0070671_1000773952 258
162 3300005366 Ga0070659_100340605 Ga0070659_1003406051 258
163 3300005367 Ga0070667_100271863 Ga0070667_1002718631 258
164 3300005435 Ga0070714_100555015 Ga0070714_1005550151 258
165 3300005438 Ga0070701_10231497 Ga0070701_102314971 258
166 3300005441 Ga0070700_100031246 Ga0070700_1000312463 258
167 3300005441 Ga0070700_100476512 Ga0070700_1004765121 258
168 3300005445 Ga0070708_100011187 Ga0070708_1000111876 258
169 3300005456 Ga0070678_100303130 Ga0070678_1003031302 258
170 3300005459 Ga0068867_100156224 Ga0068867_1001562243 258
171 3300005466 Ga0070685_10025298 Ga0070685_100252983 258
172 3300005467 Ga0070706_100006042 Ga0070706_1000060426 258
173 3300005467 Ga0070706_100017045 Ga0070706_1000170458 258
174 3300005467 Ga0070706_100081847 Ga0070706_1000818473 258
175 3300005467 Ga0070706_100432389 Ga0070706_1004323892 258
176 3300005468 Ga0070707_100024173 Ga0070707_1000241734 258
177 3300005468 Ga0070707_100053222 Ga0070707_1000532222 258
178 3300005468 Ga0070707_100053783 Ga0070707_1000537836 258
179 3300005468 Ga0070707_100085026 Ga0070707_1000850261 258
180 3300005471 Ga0070698_100034353 Ga0070698_1000343535 258
181 3300005471 Ga0070698_100040748 Ga0070698_1000407486 258
182 3300005471 Ga0070698_100059095 Ga0070698_1000590954 258
183 3300005471 Ga0070698_100061928 Ga0070698_1000619283 258
184 3300005518 Ga0070699_100169580 Ga0070699_1001695803 258
185 3300005535 Ga0070684_100203411 Ga0070684_1002034111 258
186 3300005548 Ga0070665_100099152 Ga0070665_1000991522 258
187 3300005564 Ga0070664_100109463 Ga0070664_1001094632 258
188 3300005841 Ga0068863_100473412 Ga0068863_1004734121 258
189 3300005842 Ga0068858_100219444 Ga0068858_1002194442 258
190 3300005983 Ga0081540_1003263 Ga0081540_100326310 258
191 3300006028 Ga0070717_10021377 Ga0070717_100213775 258
192 3300006028 Ga0070717_10446215 Ga0070717_104462152 258
193 3300006175 Ga0070712_100111055 Ga0070712_1001110552 258
194 3300006946 Ga0079104_1000029 Ga0079104_100002988 258
195 3300006946 Ga0079104_1001120 Ga0079104_100112017 258
196 3300009011 Ga0105251_10000041 Ga0105251_1000004179 258
197 3300009093 Ga0105240_10218276 Ga0105240_102182762 258
198 3300009098 Ga0105245_10041400 Ga0105245_100414003 258
199 3300009101 Ga0105247_10021042 Ga0105247_100210424 258
200 3300009176 Ga0105242_10139473 Ga0105242_101394733 258
201 3300009545 Ga0105237_10203377 Ga0105237_102033773 258
202 3300009553 Ga0105249_10125900 Ga0105249_101259003 258
203 3300009553 Ga0105249_10277166 Ga0105249_102771662 258
204 3300010375 Ga0105239_10158462 Ga0105239_101584621 258
205 3300010375 Ga0105239_10741237 Ga0105239_107412371 258
206 3300011119 Ga0105246_10024387 Ga0105246_100243875 258
207 3300013105 Ga0157369_10003937 Ga0157369_100039374 258
208 3300013306 Ga0163162_10013235 Ga0163162_100132356 258
209 3300013307 Ga0157372_10001072 Ga0157372_1000107235 258
210 3300013307 Ga0157372_10001224 Ga0157372_1000122419 258
211 3300013307 Ga0157372_10020555 Ga0157372_100205555 258
212 3300013307 Ga0157372_10627881 Ga0157372_106278812 258
213 3300014325 Ga0163163_10279133 Ga0163163_102791332 258
214 3300025258 Ga0209129_1000018 Ga0209129_1000018411 258
215 3300025284 Ga0209130_1001730 Ga0209130_10017307 258
216 3300025302 Ga0207426_1000113 Ga0207426_1000113163 258
217 3300025735 Ga0207713_1000776 Ga0207713_100077626 258
218 3300025900 Ga0207710_10115803 Ga0207710_101158032 258
219 3300025900 Ga0207710_10134095 Ga0207710_101340951 258
220 3300025910 Ga0207684_10017040 Ga0207684_100170403 258
221 3300025910 Ga0207684_10017449 Ga0207684_100174495 258
222 3300025910 Ga0207684_10055085 Ga0207684_100550854 258
223 3300025910 Ga0207684_10232687 Ga0207684_102326871 258
224 3300025913 Ga0207695_10032247 Ga0207695_100322471 258
225 3300025922 Ga0207646_10002185 Ga0207646_100021859 258
226 3300025922 Ga0207646_10015012 Ga0207646_100150128 258
227 3300025922 Ga0207646_10019286 Ga0207646_100192864 258
228 3300025925 Ga0207650_10147082 Ga0207650_101470821 258
229 3300025927 Ga0207687_10024518 Ga0207687_100245183 258
230 3300025932 Ga0207690_10109096 Ga0207690_101090961 258
231 3300025934 Ga0207686_10235011 Ga0207686_102350112 258
232 3300025961 Ga0207712_10190082 Ga0207712_101900821 258
233 3300026023 Ga0207677_10104117 Ga0207677_101041172 258
234 3300026067 Ga0207678_10202344 Ga0207678_102023442 258
235 3300026075 Ga0207708_10177189 Ga0207708_101771893 258
236 3300026088 Ga0207641_10372767 Ga0207641_103727672 258
237 3300026118 Ga0207675_100023329 Ga0207675_10002332911 258
238 3300027111 Ga0209281_1000051 Ga0209281_1000051211 258
239 3300027111 Ga0209281_1000114 Ga0209281_1000114175 258
240 3300027111 Ga0209281_1000118 Ga0209281_100011885 258
241 3300027312 Ga0209371_1000041 Ga0209371_100004191 258
242 3300027312 Ga0209371_1000093 Ga0209371_1000093133 258
243 3300027312 Ga0209371_1001424 Ga0209371_10014244 258
244 3300027312 Ga0209371_1001798 Ga0209371_100179812 258
245 3300027312 Ga0209371_1006154 Ga0209371_10061544 258
246 3300028573 Ga0265334_10010530 Ga0265334_100105306 258
247 3300028573 Ga0265334_10030073 Ga0265334_100300732 258
248 3300028577 Ga0265318_10007993 Ga0265318_100079934 258
249 3300028577 Ga0265318_10016852 Ga0265318_100168523 258
250 3300028653 Ga0265323_10007680 Ga0265323_100076802 258
251 3300028653 Ga0265323_10008468 Ga0265323_100084684 258
252 3300028794 Ga0307515_10062286 Ga0307515_100622866 258
253 3300028800 Ga0265338_10030730 Ga0265338_100307305 258
254 3300030500 Ga0268256_1000002 Ga0268256_10000021048 258
255 3300030500 Ga0268256_1000003 Ga0268256_1000003915 258
256 3300030500 Ga0268256_1000081 Ga0268256_100008130 258
257 3300030500 Ga0268256_1001170 Ga0268256_100117017 258
258 3300030500 Ga0268256_1002026 Ga0268256_10020267 258
259 3300030500 Ga0268256_1002642 Ga0268256_10026422 258
260 3300030500 Ga0268256_1006131 Ga0268256_10061313 258
261 3300030500 Ga0268256_1039038 Ga0268256_10390381 258
262 3300031235 Ga0265330_10049904 Ga0265330_100499042 258
263 3300031344 Ga0265316_10010404 Ga0265316_100104048 258
264 3300031344 Ga0265316_10014471 Ga0265316_100144714 258
265 3300031344 Ga0265316_10023871 Ga0265316_100238712 258
266 3300031456 Ga0307513_10026563 Ga0307513_100265631 258
267 3300031507 Ga0307509_10213937 Ga0307509_102139372 258
268 3300031711 Ga0265314_10094060 Ga0265314_100940602 258
269 3300031712 Ga0265342_10006458 Ga0265342_1000645813 258
270 3300031712 Ga0265342_10148522 Ga0265342_101485222 258
271 3300031712 Ga0265342_10180075 Ga0265342_101800752 258
272 3300031730 Ga0307516_10000351 Ga0307516_1000035151 258
273 3300031730 Ga0307516_10102058 Ga0307516_101020582 258
274 3300031838 Ga0307518_10033996 Ga0307518_100339963 258
275 3300031995 Ga0307409_100528427 Ga0307409_1005284272 258
276 3300032126 Ga0307415_100674303 Ga0307415_1006743031 258
277 3300041405 Ga0439438_007474 Ga0439438_007474_2280_3125 258
278 3300041407 Ga0439447_012355 Ga0439447_012355_1542_2387 258
279 3300042010 Ga0439452_000008 Ga0439452_000008_111780_112610 258
280 3300044694 Ga0466963_0000366 Ga0466963_0000366_6323_7276 258
281 3300046459 Ga0495629_0000015 Ga0495629_0000015_148130_148960 258
282 3300046459 Ga0495629_0284849 Ga0495629_0284849_176_1006 258
283 3300046463 Ga0495653_0000764 Ga0495653_0000764_3261_4091 258
284 3300046472 Ga0495580_0109119 Ga0495580_0109119_412_1269 258
285 3300046476 Ga0495662_0066291 Ga0495662_0066291_437_1267 258
286 3300046500 Ga0495596_0003359 Ga0495596_0003359_3183_4013 258
287 3300046501 Ga0495607_0000101 Ga0495607_0000101_26400_27242 258
288 3300046507 Ga0495606_0034521 Ga0495606_0034521_2360_3193 258
289 3300046512 Ga0495610_0002628 Ga0495610_0002628_11842_12675 258
290 3300046512 Ga0495610_0003664 Ga0495610_0003664_2549_3379 258
291 3300046515 Ga0495620_0004604 Ga0495620_0004604_2969_3802 258
292 3300046516 Ga0495628_0023248 Ga0495628_0023248_2685_3542 258
293 3300046518 Ga0495631_0048439 Ga0495631_0048439_662_1495 258
294 3300046519 Ga0495632_0030908 Ga0495632_0030908_717_1547 258
295 3300046520 Ga0495637_0009178 Ga0495637_0009178_2835_3668 258
296 3300046522 Ga0495643_0000650 Ga0495643_0000650_665_1498 258
297 3300046522 Ga0495643_0026735 Ga0495643_0026735_1446_2276 258
298 3300046675 Ga0495657_0072392 Ga0495657_0072392_179_1009 258
299 3300046680 Ga0495646_0018018 Ga0495646_0018018_2976_3833 258
300 3300046689 Ga0495613_0132494 Ga0495613_0132494_351_1181 258
301 3300046690 Ga0495624_0012761 Ga0495624_0012761_2168_2998 258
302 3300046809 Ga0495600_0016211 Ga0495600_0016211_3474_4304 258
303 3300047317 Ga0495604_0003124 Ga0495604_0003124_12036_12866 258
304 3300047319 Ga0495674_0018888 Ga0495674_0018888_1429_2259 258
305 3300047321 Ga0495676_0108824 Ga0495676_0108824_42_872 258
306 3300047469 Ga0495673_0000201 Ga0495673_0000201_18535_19371 258
307 3300047470 Ga0495681_0069282 Ga0495681_0069282_142_975 258
308 3300047472 Ga0495686_0000045 Ga0495686_0000045_126021_126851 258
309 3300047472 Ga0495686_0007917 Ga0495686_0007917_4747_5577 258
310 3300047472 Ga0495686_0054113 Ga0495686_0054113_341_1183 258
311 3300047673 Ga0495593_0000415 Ga0495593_0000415_20973_21803 258
312 3300048904 Ga0496101_0121742 Ga0496101_0121742_132_962 258
313 3300048904 Ga0496101_0373383 Ga0496101_0373383_264_1109 258
314 3300048905 Ga0496102_0153984 Ga0496102_0153984_923_1768 258
315 3300048909 Ga0496106_0338347 Ga0496106_0338347_60_905 258
316 3300048910 Ga0496107_0229871 Ga0496107_0229871_450_1295 258
317 3300048911 Ga0496108_0107616 Ga0496108_0107616_1188_2033 258
318 3300048912 Ga0496109_0320158 Ga0496109_0320158_79_924 258
319 3300048917 Ga0496114_0536924 Ga0496114_0536924_36_878 258
320 3300048919 Ga0496116_0008397 Ga0496116_0008397_300_1130 258
321 3300048919 Ga0496116_0072633 Ga0496116_0072633_1273_2103 258
322 3300048920 Ga0496117_0000377 Ga0496117_0000377_32705_33535 258
323 3300048920 Ga0496117_0018466 Ga0496117_0018466_3964_4794 258
324 3300048920 Ga0496117_0029918 Ga0496117_0029918_1085_1909 258
325 3300048920 Ga0496117_0111850 Ga0496117_0111850_790_1620 258
326 3300048921 Ga0496118_0000886 Ga0496118_0000886_8525_9355 258
327 3300048921 Ga0496118_0006323 Ga0496118_0006323_12164_12994 258
328 3300048921 Ga0496118_0024539 Ga0496118_0024539_1142_1972 258
329 3300048921 Ga0496118_0044525 Ga0496118_0044525_1242_2066 258
330 3300048922 Ga0496119_0000005 Ga0496119_0000005_363010_363840 258
331 3300048922 Ga0496119_0000066 Ga0496119_0000066_112409_113239 258
332 3300048922 Ga0496119_0000140 Ga0496119_0000140_65068_65892 258
333 3300048923 Ga0496120_0000005 Ga0496120_0000005_379463_380293 258
334 3300048923 Ga0496120_0000011 Ga0496120_0000011_182198_183022 258
335 3300048923 Ga0496120_0226680 Ga0496120_0226680_11_844 258
336 3300048925 Ga0496122_0000253 Ga0496122_0000253_83783_84595 258
337 3300048925 Ga0496122_0028955 Ga0496122_0028955_2417_3286 258
338 3300048926 Ga0496123_0000206 Ga0496123_0000206_35940_36752 258
339 3300048927 Ga0496124_0000148 Ga0496124_0000148_78747_79571 258
340 3300048927 Ga0496124_0000283 Ga0496124_0000283_45499_46329 258
341 3300048927 Ga0496124_0015594 Ga0496124_0015594_4334_5164 258
342 3300048927 Ga0496124_0159378 Ga0496124_0159378_36_866 258
343 3300048928 Ga0496125_0012534 Ga0496125_0012534_6975_7805 258
344 3300048929 Ga0496126_0104024 Ga0496126_0104024_970_1806 258
345 3300049568 Ga0501031_0074948 Ga0501031_0074948_170_1009 258
346 3300049571 Ga0501034_0442552 Ga0501034_0442552_182_1099 258
347 3300049574 Ga0501038_0306014 Ga0501038_0306014_174_1010 258
348 3300049581 Ga0501047_0019596 Ga0501047_0019596_436_1353 258
349 3300049823 Ga0501044_0046450 Ga0501044_0046450_3568_4485 258
350 3300053085 Ga0495619_0356169 Ga0495619_0356169_41_820 258
351 3300053125 Ga0500618_000292 Ga0500618_000292_30119_30961 258
352 3300053148 Ga0500590_000200 Ga0500590_000200_6069_6899 258
353 3300053177 Ga0500636_0049297 Ga0500636_0049297_263_1093 258
354 3300053177 Ga0500636_0236339 Ga0500636_0236339_26_886 258
355 iso_pu_bacteria 2508501039 2508673237 258
356 iso_pu_bacteria 2513237098 2513673437 258
357 iso_pu_bacteria 2585427594 2585846031 258
358 iso_pu_bacteria 2648501693 2650896320 258
359 iso_pu_bacteria 2731639228 2731907512 258
360 iso_pu_bacteria 2791354903 2791921932 258
361 iso_pu_bacteria 2903768456 2903777400 258
362 iso_pu_bacteria 2919501602 2919501668 258
363 iso_pu_bacteria 2926063275 2926063341 258
364 iso_pu_bacteria 2935625433 2935627012 258
365 iso_pu_bacteria 2939617950 2939619246 258
366 iso_pu_bacteria 2974435778 2974438120 258
367 iso_pu_bacteria 8019504834 8019506130 258
368 iso_pu_bacteria 8047710418 8047716653 258

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

33

222

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

39

240

0.93

PF08659

KR

KR domain

34

206

0.86

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

35

229

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3enn-assembly1.cif.gz_D 2.1a crystal structure of glucose/ribitol dehydrogenase from brucella melitensis (p43212) 0.9368 2 166
4weo-assembly1.cif.gz_A crystal structure of a putative acetoin(diacetyl) reductase burkholderia cenocepacia 0.935 2 164
6zz0-assembly1.cif.gz_D structure of the borneol dehydrogenase of salvia rosmarinus (apo) 0.9349 3 162
3n74-assembly1.cif.gz_C crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from brucella melitensis 0.9346 2 162
3m1a-assembly1.cif.gz_G the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9302 2 256
ID Description Score Start End Superfamily
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.958 63 166 3.40.50.720
4weoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.935 2 164 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9274 2 170 3.40.50.720
af_Q54WA9_4_295_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9261 2 258 3.40.50.720
af_Q54HW7_18_312_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9255 4 258 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2A3XIC6-F1-model_v4 Short-chain dehydrogenase/reductase 0.9932 3 257 GO:0016491
AF-J3HWB1-F1-model_v4 Short-chain alcohol dehydrogenase 0.9923 3 258 GO:0016491
AF-A0A2D8QD22-F1-model_v4 Short-chain dehydrogenase/reductase 0.9913 2 257 GO:0016491
AF-A0A4Q6BSI7-F1-model_v4 SDR family oxidoreductase 0.9909 3 162 GO:0016491
AF-A0A094LMV8-F1-model_v4 Short-chain dehydrogenase 0.9908 3 258 GO:0016491

Feature Viewer

pLDDT pTM Quality
95.06 0.91 High
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Predicted Structure (AlphaFold2)

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