F424620

General Info

Members Datasets Scaffolds Average Seq Length
368 175 736 317

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100000865|Ga0070697_1000008658
Length 371
Sequence MCCFRLTLFPRPISFQSSFFLLDSAAKRFRIPELVITQSFETSIYVRSKSENRDSQSEFAMYPFRNILFPTDFTPRARAALKYAAAFAHSGGGRVVLFSVQSATVPANLLTLPERVFEEQENRWLLQIRTEVRDLLADPLFDGLEVEPVIVEGEPAPEIAKAVRNYDIDLVTVVTHGRKGLSRALWGSTAEEIIAEAPCPVLTIRPPQHDFVEHKGGRSEVRLNRVLLATNFRPSSAAATQTGAELHAVYVIGDYLEQISVMFPEGGLNALTRLRSYVQDRMAQLARGDGARASTHIAEGRPYEEVVRLAAEKDADLIVIGTSIHASLFGGTPVLGSEIERVVRNAPCPVLCVPAARVMTPLPALITQPVS

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
56 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
61 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
62 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
63 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
64 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
76 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
79 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
80 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
81 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
82 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
83 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
84 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
85 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
86 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
87 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
88 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
89 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
90 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
91 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
92 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
133 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
136 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
137 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
138 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
139 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
142 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
143 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
144 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
145 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
146 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
147 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
148 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
149 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
150 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
151 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
162 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
163 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
164 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.17
Rhizosphere 97.83
Stem 0
Stem Tuber 0
Unclassified 16.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100000865 3300005536 Bacteria 22780
2 JGI24748J21848_1000005 3300002074 Bacteria 228924
3 JGI24034J26672_10000003 3300002239 Bacteria 501747
4 Ga0065704_10071899 3300005289 Bacteria 9656
5 Ga0065715_10001924 3300005293 Bacteria 5584
6 Ga0065707_10109094 3300005295 Bacteria 2482
7 Ga0065707_10112730 3300005295 Bacteria 2302
8 Ga0070676_10284482 3300005328 Bacteria 1115
9 Ga0070683_100579394 3300005329 Unclassified 1073
10 Ga0070690_100103760 3300005330 Bacteria 1888
11 Ga0070690_100140839 3300005330 Bacteria 1637
12 Ga0070690_100186098 3300005330 Bacteria 1437
13 Ga0070690_100228702 3300005330 Bacteria 1306
14 Ga0070690_100235206 3300005330 Unclassified 1290
15 Ga0068869_100007651 3300005334 Bacteria 6918
16 Ga0068869_100019174 3300005334 Bacteria 4669
17 Ga0068869_100282005 3300005334 Unclassified 1336
18 Ga0070666_10134662 3300005335 Bacteria 1718
19 Ga0070680_100055723 3300005336 Bacteria 3231
20 Ga0070682_100000076 3300005337 Bacteria 90097
21 Ga0070691_10204955 3300005341 Unclassified 1038
22 Ga0070687_100028350 3300005343 Bacteria 2715
23 Ga0070692_10060294 3300005345 Bacteria 1997
24 Ga0070692_10219432 3300005345 Unclassified 1123
25 Ga0070669_100067351 3300005353 Bacteria 2641
26 Ga0070675_100148160 3300005354 Bacteria 2011
27 Ga0070671_100279562 3300005355 Bacteria 1419
28 Ga0070659_100003718 3300005366 Bacteria 10881
29 Ga0070659_100370288 3300005366 Bacteria 1205
30 Ga0070705_100187836 3300005440 Bacteria 1405
31 Ga0070700_100011174 3300005441 Bacteria 4969
32 Ga0070700_100025334 3300005441 Bacteria 3492
33 Ga0070700_100033145 3300005441 Bacteria 3109
34 Ga0070700_100174766 3300005441 Bacteria 1490
35 Ga0070694_100056099 3300005444 Unclassified 2675
36 Ga0070708_100041705 3300005445 Bacteria 4025
37 Ga0070708_100155765 3300005445 Bacteria 2127
38 Ga0070678_100050386 3300005456 Bacteria 3012
39 Ga0070662_100202323 3300005457 Bacteria 1577
40 Ga0070681_10002942 3300005458 Bacteria 15795
41 Ga0070681_10349229 3300005458 Unclassified 1389
42 Ga0068867_100062633 3300005459 Bacteria 2764
43 Ga0068867_100231372 3300005459 Bacteria 1494
44 Ga0070685_10006992 3300005466 Bacteria 5758
45 Ga0070706_100004064 3300005467 Bacteria 14224
46 Ga0070706_100015338 3300005467 Bacteria 7074
47 Ga0070706_100048434 3300005467 Bacteria 3922
48 Ga0070706_100098667 3300005467 Unclassified 2714
49 Ga0070706_100099387 3300005467 Bacteria 2703
50 Ga0070706_100111356 3300005467 Bacteria 2547
51 Ga0070707_100000026 3300005468 Bacteria 124537
52 Ga0070707_100086840 3300005468 Unclassified 3025
53 Ga0070707_100102688 3300005468 Bacteria 2770
54 Ga0070707_100224998 3300005468 Unclassified 1827
55 Ga0070707_100380258 3300005468 Bacteria 1372
56 Ga0070698_100001565 3300005471 Bacteria 25413
57 Ga0070698_100001982 3300005471 Bacteria 22731
58 Ga0070698_100003110 3300005471 Bacteria 18295
59 Ga0070698_100019774 3300005471 Bacteria 7063
60 Ga0070698_100063972 3300005471 Unclassified 3708
61 Ga0070699_100004296 3300005518 Bacteria 12592
62 Ga0070699_100064315 3300005518 Unclassified 3182
63 Ga0070699_100157777 3300005518 Bacteria 2008
64 Ga0070699_100385492 3300005518 Bacteria 1266
65 Ga0070679_100093674 3300005530 Bacteria 2991
66 Ga0070697_100001188 3300005536 Bacteria 19721
67 Ga0070697_100019061 3300005536 Bacteria 5415
68 Ga0070697_100067895 3300005536 Bacteria 2917
69 Ga0070697_100113254 3300005536 Bacteria 2263
70 Ga0070697_100132716 3300005536 Bacteria 2089
71 Ga0070697_100250343 3300005536 Unclassified 1515
72 Ga0068853_100039834 3300005539 Bacteria 4008
73 Ga0070686_100001025 3300005544 Bacteria 16056
74 Ga0070686_100012740 3300005544 Bacteria 4799
75 Ga0070686_100078084 3300005544 Bacteria 2185
76 Ga0070695_100022017 3300005545 Bacteria 3906
77 Ga0070695_100073318 3300005545 Bacteria 2246
78 Ga0070695_100086643 3300005545 Bacteria 2082
79 Ga0070695_100129807 3300005545 Bacteria 1736
80 Ga0070696_100151129 3300005546 Unclassified 1704
81 Ga0070696_100174319 3300005546 Bacteria 1592
82 Ga0070696_100174360 3300005546 Bacteria 1592
83 Ga0070704_100004621 3300005549 Bacteria 7965
84 Ga0070704_100112302 3300005549 Bacteria 2076
85 Ga0070704_100183084 3300005549 Bacteria 1677
86 Ga0070704_100230852 3300005549 Unclassified 1510
87 Ga0070704_100246397 3300005549 Bacteria 1465
88 Ga0070664_100001165 3300005564 Bacteria 20869
89 Ga0070664_100125148 3300005564 Unclassified 2254
90 Ga0070664_100269477 3300005564 Bacteria 1533
91 Ga0070664_100349832 3300005564 Bacteria 1344
92 Ga0068857_100002204 3300005577 Bacteria 15873
93 Ga0068857_100354274 3300005577 Unclassified 1359
94 Ga0068854_100151886 3300005578 Bacteria 1787
95 Ga0070702_100031204 3300005615 Unclassified 2914
96 Ga0070702_100062573 3300005615 Bacteria 2170
97 Ga0070702_100081949 3300005615 Bacteria 1935
98 Ga0068852_100610687 3300005616 Bacteria 1096
99 Ga0068859_100071356 3300005617 Bacteria 3509
100 Ga0068859_100271396 3300005617 Unclassified 1788
101 Ga0068859_100316336 3300005617 Bacteria 1655
102 Ga0068859_100484109 3300005617 Unclassified 1333
103 Ga0068859_100505045 3300005617 Unclassified 1304
104 Ga0068864_100019245 3300005618 Bacteria 5707
105 Ga0068864_100057432 3300005618 Bacteria 3362
106 Ga0068866_10046367 3300005718 Unclassified 2186
107 Ga0068866_10089588 3300005718 Bacteria 1672
108 Ga0068861_100002429 3300005719 Bacteria 12146
109 Ga0068861_100030755 3300005719 Bacteria 3937
110 Ga0068861_100056879 3300005719 Bacteria 2987
111 Ga0068861_100068504 3300005719 Bacteria 2742
112 Ga0068870_10154255 3300005840 Bacteria 1355
113 Ga0068863_100016483 3300005841 Bacteria 7089
114 Ga0068863_100396773 3300005841 Bacteria 1349
115 Ga0068858_100000121 3300005842 Bacteria 80770
116 Ga0068858_100052659 3300005842 Bacteria 3766
117 Ga0068858_100120697 3300005842 Bacteria 2451
118 Ga0068858_100253186 3300005842 Bacteria 1673
119 Ga0068860_100035048 3300005843 Bacteria 4815
120 Ga0068860_100077665 3300005843 Unclassified 3158
121 Ga0068860_100200806 3300005843 Unclassified 1932
122 Ga0068862_100021786 3300005844 Bacteria 5358
123 Ga0081539_10002782 3300005985 Bacteria 23520
124 Ga0070715_10000064 3300006163 Bacteria 33475
125 Ga0070716_100000002 3300006173 Bacteria 396037
126 Ga0097621_100005582 3300006237 Bacteria 8870
127 Ga0097621_100020764 3300006237 Bacteria 5067
128 Ga0097621_100034438 3300006237 Bacteria 4040
129 Ga0068871_100012809 3300006358 Bacteria 6205
130 Ga0068871_100060742 3300006358 Bacteria 3084
131 Ga0075428_100285841 3300006844 Bacteria 1774
132 Ga0075431_100046064 3300006847 Bacteria 4496
133 Ga0075433_10200415 3300006852 Bacteria 1775
134 Ga0075433_10252948 3300006852 Bacteria 1563
135 Ga0075434_100130428 3300006871 Bacteria 2532
136 Ga0075434_100163035 3300006871 Bacteria 2249
137 Ga0075434_100215847 3300006871 Unclassified 1938
138 Ga0075429_100016725 3300006880 Bacteria 6353
139 Ga0075429_100020647 3300006880 Bacteria 5717
140 Ga0075436_100000101 3300006914 Bacteria 50528
141 Ga0097620_100071356 3300006931 Bacteria 3509
142 Ga0097620_100271387 3300006931 Unclassified 1788
143 Ga0097620_100316345 3300006931 Bacteria 1655
144 Ga0097620_100484107 3300006931 Unclassified 1333
145 Ga0097620_100505059 3300006931 Unclassified 1304
146 Ga0099794_10031795 3300007265 Unclassified 2473
147 Ga0105240_10535496 3300009093 Unclassified 1298
148 Ga0111539_10003573 3300009094 Bacteria 20496
149 Ga0111539_10007200 3300009094 Bacteria 14255
150 Ga0111539_10052972 3300009094 Bacteria 4830
151 Ga0111539_10078209 3300009094 Bacteria 3892
152 Ga0105245_10020820 3300009098 Bacteria 5749
153 Ga0105245_10482083 3300009098 Bacteria 1254
154 Ga0105247_10000003 3300009101 Bacteria 694517
155 Ga0114129_10076553 3300009147 Bacteria 4658
156 Ga0114129_10155162 3300009147 Bacteria 3131
157 Ga0114129_10220164 3300009147 Bacteria 2561
158 Ga0114129_10328715 3300009147 Bacteria 2031
159 Ga0114129_10352494 3300009147 Bacteria 1949
160 Ga0114129_10432738 3300009147 Bacteria 1728
161 Ga0114129_10607748 3300009147 Bacteria 1416
162 Ga0105243_10000112 3300009148 Bacteria 93493
163 Ga0105243_10003072 3300009148 Bacteria 13750
164 Ga0105243_10004363 3300009148 Bacteria 11203
165 Ga0105243_10035126 3300009148 Bacteria 3885
166 Ga0105242_10000013 3300009176 Bacteria 133981
167 Ga0105242_10000482 3300009176 Bacteria 31734
168 Ga0105242_10115579 3300009176 Bacteria 2294
169 Ga0105242_10206182 3300009176 Bacteria 1749
170 Ga0105242_10314940 3300009176 Unclassified 1433
171 Ga0105248_10050979 3300009177 Bacteria 4644
172 Ga0105248_10095308 3300009177 Bacteria 3351
173 Ga0105248_10133995 3300009177 Unclassified 2795
174 Ga0105238_10030903 3300009551 Bacteria 5451
175 Ga0105249_10000003 3300009553 Bacteria 370855
176 Ga0105249_10240877 3300009553 Bacteria 1788
177 Ga0105239_10025902 3300010375 Bacteria 6459
178 Ga0105239_10173965 3300010375 Bacteria 2408
179 Ga0105239_10189985 3300010375 Bacteria 2299
180 Ga0105239_10705962 3300010375 Bacteria 1153
181 Ga0105246_10038796 3300011119 Bacteria 3205
182 Ga0105246_10070468 3300011119 Bacteria 2459
183 Ga0157373_10059519 3300013100 Bacteria 2707
184 Ga0157371_10080367 3300013102 Bacteria 2309
185 Ga0157374_10007155 3300013296 Bacteria 9507
186 Ga0157374_10116618 3300013296 Bacteria 2573
187 Ga0157378_10000007 3300013297 Bacteria 177173
188 Ga0157378_10051579 3300013297 Unclassified 3661
189 Ga0157378_10111309 3300013297 Bacteria 2510
190 Ga0157378_10145435 3300013297 Bacteria 2204
191 Ga0157378_10177215 3300013297 Bacteria 2003
192 Ga0157378_10210779 3300013297 Bacteria 1842
193 Ga0157378_10232131 3300013297 Bacteria 1759
194 Ga0157378_10287411 3300013297 Bacteria 1587
195 Ga0163162_10000020 3300013306 Bacteria 220558
196 Ga0163162_10001625 3300013306 Bacteria 21041
197 Ga0163162_10008523 3300013306 Bacteria 9994
198 Ga0163162_10098742 3300013306 Bacteria 3010
199 Ga0163162_10210293 3300013306 Bacteria 2075
200 Ga0163162_10231790 3300013306 Unclassified 1977
201 Ga0157372_10368596 3300013307 Unclassified 1673
202 Ga0157375_10069676 3300013308 Unclassified 3524
203 Ga0157375_10267185 3300013308 Bacteria 1872
204 Ga0163163_10010285 3300014325 Bacteria 8407
205 Ga0163163_10018922 3300014325 Bacteria 6461
206 Ga0163163_10059814 3300014325 Bacteria 3770
207 Ga0163163_10062445 3300014325 Unclassified 3691
208 Ga0163163_10082438 3300014325 Bacteria 3220
209 Ga0157380_10000792 3300014326 Bacteria 19855
210 Ga0157380_10001459 3300014326 Bacteria 15470
211 Ga0157380_10002027 3300014326 Bacteria 13525
212 Ga0157380_10029228 3300014326 Bacteria 4212
213 Ga0157380_10032446 3300014326 Unclassified 4017
214 Ga0157380_10171332 3300014326 Bacteria 1897
215 Ga0157377_10025640 3300014745 Bacteria 3146
216 Ga0157379_10061075 3300014968 Bacteria 3370
217 Ga0157376_10076064 3300014969 Bacteria 2867
218 Ga0163161_10261735 3300017792 Bacteria 1351
219 Ga0163161_10291002 3300017792 Unclassified 1284
220 Ga0163161_10309931 3300017792 Bacteria 1245
221 Ga0207672_1000042 3300025223 Bacteria 16334
222 Ga0207653_10000035 3300025885 Bacteria 102840
223 Ga0207642_10167870 3300025899 Bacteria 1184
224 Ga0207710_10000001 3300025900 Bacteria 1797433
225 Ga0207688_10022677 3300025901 Bacteria 3436
226 Ga0207647_10018261 3300025904 Bacteria 4750
227 Ga0207685_10000056 3300025905 Bacteria 34032
228 Ga0207645_10107268 3300025907 Bacteria 1806
229 Ga0207643_10061131 3300025908 Bacteria 2151
230 Ga0207684_10159771 3300025910 Bacteria 1940
231 Ga0207684_10365007 3300025910 Unclassified 1242
232 Ga0207684_10382603 3300025910 Bacteria 1210
233 Ga0207707_10028629 3300025912 Bacteria 4869
234 Ga0207707_10068993 3300025912 Bacteria 3081
235 Ga0207660_10035651 3300025917 Bacteria 3455
236 Ga0207660_10077119 3300025917 Bacteria 2439
237 Ga0207662_10000318 3300025918 Bacteria 21875
238 Ga0207652_10412346 3300025921 Unclassified 1218
239 Ga0207646_10005520 3300025922 Bacteria 13294
240 Ga0207646_10072505 3300025922 Bacteria 3076
241 Ga0207646_10194779 3300025922 Bacteria 1830
242 Ga0207646_10248314 3300025922 Bacteria 1607
243 Ga0207646_10326439 3300025922 Bacteria 1386
244 Ga0207681_10003024 3300025923 Bacteria 10563
245 Ga0207681_10027378 3300025923 Bacteria 3685
246 Ga0207650_10015980 3300025925 Bacteria 5237
247 Ga0207644_10292709 3300025931 Bacteria 1310
248 Ga0207706_10125530 3300025933 Bacteria 2257
249 Ga0207706_10280308 3300025933 Bacteria 1454
250 Ga0207686_10000006 3300025934 Bacteria 259583
251 Ga0207686_10000209 3300025934 Bacteria 44597
252 Ga0207686_10000404 3300025934 Bacteria 29926
253 Ga0207709_10000037 3300025935 Bacteria 279771
254 Ga0207709_10000921 3300025935 Bacteria 22171
255 Ga0207709_10027114 3300025935 Unclassified 3297
256 Ga0207709_10331914 3300025935 Bacteria 1142
257 Ga0207670_10319553 3300025936 Bacteria 1221
258 Ga0207665_10000007 3300025939 Bacteria 177869
259 Ga0207665_10019114 3300025939 Bacteria 4502
260 Ga0207691_10295236 3300025940 Bacteria 1393
261 Ga0207711_10010162 3300025941 Bacteria 7815
262 Ga0207711_10249700 3300025941 Unclassified 1629
263 Ga0207689_10000863 3300025942 Bacteria 29244
264 Ga0207689_10011412 3300025942 Bacteria 7615
265 Ga0207689_10017840 3300025942 Bacteria 5997
266 Ga0207689_10340062 3300025942 Bacteria 1247
267 Ga0207679_10004948 3300025945 Bacteria 8313
268 Ga0207679_10035312 3300025945 Bacteria 3536
269 Ga0207679_10111231 3300025945 Bacteria 2162
270 Ga0207651_10014772 3300025960 Bacteria 4519
271 Ga0207712_10000232 3300025961 Bacteria 54804
272 Ga0207640_10052357 3300025981 Bacteria 2659
273 Ga0207640_10084395 3300025981 Bacteria 2181
274 Ga0207640_10087447 3300025981 Bacteria 2148
275 Ga0207640_10306869 3300025981 Bacteria 1258
276 Ga0207658_10057080 3300025986 Bacteria 2900
277 Ga0207658_10368137 3300025986 Bacteria 1256
278 Ga0207677_10289364 3300026023 Bacteria 1349
279 Ga0207703_10000200 3300026035 Bacteria 69944
280 Ga0207703_10125582 3300026035 Bacteria 2208
281 Ga0207703_10223078 3300026035 Bacteria 1686
282 Ga0207703_10367994 3300026035 Unclassified 1327
283 Ga0207639_10208732 3300026041 Bacteria 1680
284 Ga0207708_10014244 3300026075 Bacteria 5946
285 Ga0207708_10031972 3300026075 Bacteria 3996
286 Ga0207708_10051607 3300026075 Bacteria 3132
287 Ga0207708_10060337 3300026075 Unclassified 2895
288 Ga0207708_10082193 3300026075 Bacteria 2476
289 Ga0207708_10166237 3300026075 Bacteria 1744
290 Ga0207641_10335598 3300026088 Bacteria 1437
291 Ga0207641_10355845 3300026088 Bacteria 1396
292 Ga0207648_10026257 3300026089 Bacteria 5177
293 Ga0207676_10007196 3300026095 Bacteria 7876
294 Ga0207676_10013979 3300026095 Bacteria 5762
295 Ga0207676_10138878 3300026095 Bacteria 2077
296 Ga0207676_10230375 3300026095 Unclassified 1656
297 Ga0207676_10331050 3300026095 Bacteria 1401
298 Ga0207674_10000079 3300026116 Bacteria 102085
299 Ga0207674_10013473 3300026116 Bacteria 9069
300 Ga0207675_100001232 3300026118 Bacteria 25535
301 Ga0207675_100006359 3300026118 Bacteria 11198
302 Ga0207675_100013144 3300026118 Bacteria 7726
303 Ga0207675_100060248 3300026118 Bacteria 3543
304 Ga0207675_100493970 3300026118 Unclassified 1218
305 Ga0207428_10005130 3300027907 Bacteria 12272
306 Ga0207428_10008166 3300027907 Bacteria 9474
307 Ga0207428_10102517 3300027907 Bacteria 2210
308 Ga0207428_10271486 3300027907 Bacteria 1260
309 Ga0268265_10035089 3300028380 Bacteria 3661
310 Ga0268265_10085503 3300028380 Bacteria 2503
311 Ga0268264_10091145 3300028381 Unclassified 2629
312 Ga0268264_10232881 3300028381 Unclassified 1702
313 Ga0307405_10088148 3300031731 Bacteria 2047
314 Ga0307405_10159780 3300031731 Bacteria 1594
315 Ga0307409_100280259 3300031995 Bacteria 1540
316 Ga0307416_100481452 3300032002 Bacteria 1301
317 Ga0307416_100711393 3300032002 Bacteria 1094
318 Ga0373937_0326365 3300036401 Unclassified 1452
319 Ga0439439_0010668 3300041406 Bacteria 2200
320 Ga0451576_0378875 3300045051 Bacteria 1483
321 Ga0495639_0092161 3300046475 Unclassified 1423
322 Ga0495632_0004854 3300046519 Bacteria 9026
323 Ga0495663_0000393 3300046525 Bacteria 16144
324 Ga0495598_0000084 3300046537 Bacteria 15504
325 Ga0495621_0000311 3300046539 Bacteria 11776
326 Ga0495621_0030125 3300046539 Bacteria 1853
327 Ga0495634_0151466 3300046642 Unclassified 1467
328 Ga0495659_0023847 3300046664 Bacteria 2082
329 Ga0495647_0067917 3300046681 Bacteria 1421
330 Ga0495636_0042315 3300047318 Bacteria 1892
331 Ga0495672_0048296 3300047320 Bacteria 2524
332 Ga0496100_0042508 3300048903 Bacteria 2903
333 Ga0496104_0143577 3300048907 Bacteria 2293
334 Ga0496106_0002049 3300048909 Bacteria 15151
335 Ga0496110_0151362 3300048913 Bacteria 2101
336 Ga0496112_0394034 3300048915 Unclassified 1325
337 Ga0496112_0455473 3300048915 Bacteria 1217
338 Ga0496112_0580483 3300048915 Unclassified 1054
339 Ga0496113_0097586 3300048916 Unclassified 2274
340 Ga0501031_0279590 3300049568 Bacteria 1083
341 Ga0501038_0005200 3300049574 Bacteria 12108
342 Ga0501074_0210368 3300049590 Unclassified 1386
343 Ga0501076_0316698 3300049592 Unclassified 1280
344 Ga0501223_030531 3300049663 Unclassified 1048
345 Ga0501235_005572 3300049669 Unclassified 2739
346 Ga0501225_0019673 3300049705 Bacteria 1867
347 Ga0501283_013113 3300049779 Unclassified 1253
348 nmdc:mga05p37_150262_c1 3300050507 Bacteria 2849
349 nmdc:mga05p37_20983_c1 3300050507 Bacteria 7908
350 nmdc:mga05p37_246060_c1 3300050507 Bacteria 2147
351 nmdc:mga05p37_281504_c1 3300050507 Bacteria 1983
352 nmdc:mga05p37_46620_c1 3300050507 Bacteria 5329
353 nmdc:mga05p37_54221_c1 3300050507 Bacteria 4932
354 nmdc:mga09592_43427_c1 3300050508 Bacteria 3784
355 nmdc:mga0qj67_139999_c1 3300050509 Bacteria 1962
356 nmdc:mga06r32_45594_c1 3300050510 Bacteria 4180
357 nmdc:mga08y16_162938_c1 3300050511 Bacteria 2317
358 nmdc:mga08y16_187718_c1 3300050511 Bacteria 2145
359 nmdc:mga08y16_32450_c1 3300050511 Bacteria 5490
360 nmdc:mga0n895_375562_c1 3300050512 Bacteria 1439
361 nmdc:mga0rr50_1283_c1 3300050513 Bacteria 13688
362 nmdc:mga08x19_27_c1 3300050514 Bacteria 226652
363 nmdc:mga0a205_106996_c1 3300050515 Bacteria 2694
364 nmdc:mga0a205_281210_c1 3300050515 Bacteria 1539
365 nmdc:mga0a205_37994_c1 3300050515 Bacteria 4631
366 nmdc:mga0a205_75915_c1 3300050515 Unclassified 3247
367 Ga0501084_0328786 3300054114 Bacteria 1291
368 Ga0530510_0164162 3300061734 Bacteria 1643
369 Ga0070697_100000865
370 JGI24748J21848_1000005
371 JGI24034J26672_10000003
372 Ga0065704_10071899
373 Ga0065715_10001924
374 Ga0065707_10109094
375 Ga0065707_10112730
376 Ga0070676_10284482
377 Ga0070683_100579394
378 Ga0070690_100103760
379 Ga0070690_100140839
380 Ga0070690_100186098
381 Ga0070690_100228702
382 Ga0070690_100235206
383 Ga0068869_100007651
384 Ga0068869_100019174
385 Ga0068869_100282005
386 Ga0070666_10134662
387 Ga0070680_100055723
388 Ga0070682_100000076
389 Ga0070691_10204955
390 Ga0070687_100028350
391 Ga0070692_10060294
392 Ga0070692_10219432
393 Ga0070669_100067351
394 Ga0070675_100148160
395 Ga0070671_100279562
396 Ga0070659_100003718
397 Ga0070659_100370288
398 Ga0070705_100187836
399 Ga0070700_100011174
400 Ga0070700_100025334
401 Ga0070700_100033145
402 Ga0070700_100174766
403 Ga0070694_100056099
404 Ga0070708_100041705
405 Ga0070708_100155765
406 Ga0070678_100050386
407 Ga0070662_100202323
408 Ga0070681_10002942
409 Ga0070681_10349229
410 Ga0068867_100062633
411 Ga0068867_100231372
412 Ga0070685_10006992
413 Ga0070706_100004064
414 Ga0070706_100015338
415 Ga0070706_100048434
416 Ga0070706_100098667
417 Ga0070706_100099387
418 Ga0070706_100111356
419 Ga0070707_100000026
420 Ga0070707_100086840
421 Ga0070707_100102688
422 Ga0070707_100224998
423 Ga0070707_100380258
424 Ga0070698_100001565
425 Ga0070698_100001982
426 Ga0070698_100003110
427 Ga0070698_100019774
428 Ga0070698_100063972
429 Ga0070699_100004296
430 Ga0070699_100064315
431 Ga0070699_100157777
432 Ga0070699_100385492
433 Ga0070679_100093674
434 Ga0070697_100001188
435 Ga0070697_100019061
436 Ga0070697_100067895
437 Ga0070697_100113254
438 Ga0070697_100132716
439 Ga0070697_100250343
440 Ga0068853_100039834
441 Ga0070686_100001025
442 Ga0070686_100012740
443 Ga0070686_100078084
444 Ga0070695_100022017
445 Ga0070695_100073318
446 Ga0070695_100086643
447 Ga0070695_100129807
448 Ga0070696_100151129
449 Ga0070696_100174319
450 Ga0070696_100174360
451 Ga0070704_100004621
452 Ga0070704_100112302
453 Ga0070704_100183084
454 Ga0070704_100230852
455 Ga0070704_100246397
456 Ga0070664_100001165
457 Ga0070664_100125148
458 Ga0070664_100269477
459 Ga0070664_100349832
460 Ga0068857_100002204
461 Ga0068857_100354274
462 Ga0068854_100151886
463 Ga0070702_100031204
464 Ga0070702_100062573
465 Ga0070702_100081949
466 Ga0068852_100610687
467 Ga0068859_100071356
468 Ga0068859_100271396
469 Ga0068859_100316336
470 Ga0068859_100484109
471 Ga0068859_100505045
472 Ga0068864_100019245
473 Ga0068864_100057432
474 Ga0068866_10046367
475 Ga0068866_10089588
476 Ga0068861_100002429
477 Ga0068861_100030755
478 Ga0068861_100056879
479 Ga0068861_100068504
480 Ga0068870_10154255
481 Ga0068863_100016483
482 Ga0068863_100396773
483 Ga0068858_100000121
484 Ga0068858_100052659
485 Ga0068858_100120697
486 Ga0068858_100253186
487 Ga0068860_100035048
488 Ga0068860_100077665
489 Ga0068860_100200806
490 Ga0068862_100021786
491 Ga0081539_10002782
492 Ga0070715_10000064
493 Ga0070716_100000002
494 Ga0097621_100005582
495 Ga0097621_100020764
496 Ga0097621_100034438
497 Ga0068871_100012809
498 Ga0068871_100060742
499 Ga0075428_100285841
500 Ga0075431_100046064
501 Ga0075433_10200415
502 Ga0075433_10252948
503 Ga0075434_100130428
504 Ga0075434_100163035
505 Ga0075434_100215847
506 Ga0075429_100016725
507 Ga0075429_100020647
508 Ga0075436_100000101
509 Ga0097620_100071356
510 Ga0097620_100271387
511 Ga0097620_100316345
512 Ga0097620_100484107
513 Ga0097620_100505059
514 Ga0099794_10031795
515 Ga0105240_10535496
516 Ga0111539_10003573
517 Ga0111539_10007200
518 Ga0111539_10052972
519 Ga0111539_10078209
520 Ga0105245_10020820
521 Ga0105245_10482083
522 Ga0105247_10000003
523 Ga0114129_10076553
524 Ga0114129_10155162
525 Ga0114129_10220164
526 Ga0114129_10328715
527 Ga0114129_10352494
528 Ga0114129_10432738
529 Ga0114129_10607748
530 Ga0105243_10000112
531 Ga0105243_10003072
532 Ga0105243_10004363
533 Ga0105243_10035126
534 Ga0105242_10000013
535 Ga0105242_10000482
536 Ga0105242_10115579
537 Ga0105242_10206182
538 Ga0105242_10314940
539 Ga0105248_10050979
540 Ga0105248_10095308
541 Ga0105248_10133995
542 Ga0105238_10030903
543 Ga0105249_10000003
544 Ga0105249_10240877
545 Ga0105239_10025902
546 Ga0105239_10173965
547 Ga0105239_10189985
548 Ga0105239_10705962
549 Ga0105246_10038796
550 Ga0105246_10070468
551 Ga0157373_10059519
552 Ga0157371_10080367
553 Ga0157374_10007155
554 Ga0157374_10116618
555 Ga0157378_10000007
556 Ga0157378_10051579
557 Ga0157378_10111309
558 Ga0157378_10145435
559 Ga0157378_10177215
560 Ga0157378_10210779
561 Ga0157378_10232131
562 Ga0157378_10287411
563 Ga0163162_10000020
564 Ga0163162_10001625
565 Ga0163162_10008523
566 Ga0163162_10098742
567 Ga0163162_10210293
568 Ga0163162_10231790
569 Ga0157372_10368596
570 Ga0157375_10069676
571 Ga0157375_10267185
572 Ga0163163_10010285
573 Ga0163163_10018922
574 Ga0163163_10059814
575 Ga0163163_10062445
576 Ga0163163_10082438
577 Ga0157380_10000792
578 Ga0157380_10001459
579 Ga0157380_10002027
580 Ga0157380_10029228
581 Ga0157380_10032446
582 Ga0157380_10171332
583 Ga0157377_10025640
584 Ga0157379_10061075
585 Ga0157376_10076064
586 Ga0163161_10261735
587 Ga0163161_10291002
588 Ga0163161_10309931
589 Ga0207672_1000042
590 Ga0207653_10000035
591 Ga0207642_10167870
592 Ga0207710_10000001
593 Ga0207688_10022677
594 Ga0207647_10018261
595 Ga0207685_10000056
596 Ga0207645_10107268
597 Ga0207643_10061131
598 Ga0207684_10159771
599 Ga0207684_10365007
600 Ga0207684_10382603
601 Ga0207707_10028629
602 Ga0207707_10068993
603 Ga0207660_10035651
604 Ga0207660_10077119
605 Ga0207662_10000318
606 Ga0207652_10412346
607 Ga0207646_10005520
608 Ga0207646_10072505
609 Ga0207646_10194779
610 Ga0207646_10248314
611 Ga0207646_10326439
612 Ga0207681_10003024
613 Ga0207681_10027378
614 Ga0207650_10015980
615 Ga0207644_10292709
616 Ga0207706_10125530
617 Ga0207706_10280308
618 Ga0207686_10000006
619 Ga0207686_10000209
620 Ga0207686_10000404
621 Ga0207709_10000037
622 Ga0207709_10000921
623 Ga0207709_10027114
624 Ga0207709_10331914
625 Ga0207670_10319553
626 Ga0207665_10000007
627 Ga0207665_10019114
628 Ga0207691_10295236
629 Ga0207711_10010162
630 Ga0207711_10249700
631 Ga0207689_10000863
632 Ga0207689_10011412
633 Ga0207689_10017840
634 Ga0207689_10340062
635 Ga0207679_10004948
636 Ga0207679_10035312
637 Ga0207679_10111231
638 Ga0207651_10014772
639 Ga0207712_10000232
640 Ga0207640_10052357
641 Ga0207640_10084395
642 Ga0207640_10087447
643 Ga0207640_10306869
644 Ga0207658_10057080
645 Ga0207658_10368137
646 Ga0207677_10289364
647 Ga0207703_10000200
648 Ga0207703_10125582
649 Ga0207703_10223078
650 Ga0207703_10367994
651 Ga0207639_10208732
652 Ga0207708_10014244
653 Ga0207708_10031972
654 Ga0207708_10051607
655 Ga0207708_10060337
656 Ga0207708_10082193
657 Ga0207708_10166237
658 Ga0207641_10335598
659 Ga0207641_10355845
660 Ga0207648_10026257
661 Ga0207676_10007196
662 Ga0207676_10013979
663 Ga0207676_10138878
664 Ga0207676_10230375
665 Ga0207676_10331050
666 Ga0207674_10000079
667 Ga0207674_10013473
668 Ga0207675_100001232
669 Ga0207675_100006359
670 Ga0207675_100013144
671 Ga0207675_100060248
672 Ga0207675_100493970
673 Ga0207428_10005130
674 Ga0207428_10008166
675 Ga0207428_10102517
676 Ga0207428_10271486
677 Ga0268265_10035089
678 Ga0268265_10085503
679 Ga0268264_10091145
680 Ga0268264_10232881
681 Ga0307405_10088148
682 Ga0307405_10159780
683 Ga0307409_100280259
684 Ga0307416_100481452
685 Ga0307416_100711393
686 Ga0373937_0326365
687 Ga0439439_0010668
688 Ga0451576_0378875
689 Ga0495639_0092161
690 Ga0495632_0004854
691 Ga0495663_0000393
692 Ga0495598_0000084
693 Ga0495621_0000311
694 Ga0495621_0030125
695 Ga0495634_0151466
696 Ga0495659_0023847
697 Ga0495647_0067917
698 Ga0495636_0042315
699 Ga0495672_0048296
700 Ga0496100_0042508
701 Ga0496104_0143577
702 Ga0496106_0002049
703 Ga0496110_0151362
704 Ga0496112_0394034
705 Ga0496112_0455473
706 Ga0496112_0580483
707 Ga0496113_0097586
708 Ga0501031_0279590
709 Ga0501038_0005200
710 Ga0501074_0210368
711 Ga0501076_0316698
712 Ga0501223_030531
713 Ga0501235_005572
714 Ga0501225_0019673
715 Ga0501283_013113
716 nmdc:mga05p37_150262_c1
717 nmdc:mga05p37_20983_c1
718 nmdc:mga05p37_246060_c1
719 nmdc:mga05p37_281504_c1
720 nmdc:mga05p37_46620_c1
721 nmdc:mga05p37_54221_c1
722 nmdc:mga09592_43427_c1
723 nmdc:mga0qj67_139999_c1
724 nmdc:mga06r32_45594_c1
725 nmdc:mga08y16_162938_c1
726 nmdc:mga08y16_187718_c1
727 nmdc:mga08y16_32450_c1
728 nmdc:mga0n895_375562_c1
729 nmdc:mga0rr50_1283_c1
730 nmdc:mga08x19_27_c1
731 nmdc:mga0a205_106996_c1
732 nmdc:mga0a205_281210_c1
733 nmdc:mga0a205_37994_c1
734 nmdc:mga0a205_75915_c1
735 Ga0501084_0328786
736 Ga0530510_0164162

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00582

Usp

Universal stress protein family

224

354

0.91

PF00582

Usp

Universal stress protein family

63

205

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pfs-assembly1.cif.gz_A-2 crystal structure of universal stress protein from nitrosomonas europaea 0.8055 161 300
3tnj-assembly1.cif.gz_A-2 crystal structure of universal stress protein from nitrosomonas europaea with amp bound 0.803 161 302
1mjh-assembly1.cif.gz_B structure-based assignment of the biochemical function of hypothetical protein mj0577: a test case of structural genomics 0.7982 161 304
2z3v-assembly1.cif.gz_A crystal structure of uncharacterized conserved protein from thermus thermophilus hb8 0.795 161 299
3fh0-assembly1.cif.gz_B crystal structure of putative universal stress protein kpn_01444 - atpase 0.7866 162 299
ID Description Score Start End Superfamily
af_Q57997_1_162_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8181 161 304 3.40.50.620
af_Q55CS1_1_143_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8154 163 299 3.40.50.620
2pfsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8068 161 300 3.40.50.620
af_Q2FXL6_6_143_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7948 164 299 3.40.50.620
2pfsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7814 161 300 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A6L4YV12-F1-model_v4 Universal stress protein UspA-like nucleotide-binding protein 0.9215 12 292
AF-A0A6L4YV12-F1-model_v4 Universal stress protein UspA-like nucleotide-binding protein 0.9152 12 292
AF-A0A7K4CF68-F1-model_v4 Universal stress protein 0.8644 161 299
AF-A0A545TNH4-F1-model_v4 Universal stress protein 0.8488 163 300 GO:0005737
AF-A0A2M6ZDT5-F1-model_v4 UspA domain-containing protein 0.8367 161 302

Map