F424367

General Info

Members Datasets Scaffolds Average Seq Length
367 204 734 380

Family's Representative Sequence

Representative Sequence 3300025918|Ga0207662_10093404|Ga0207662_100934042
Length 448
Sequence VSVWDDLVGQAHAVEVMKTAVSGQGMSHAWLFTGPPGSGRSNAALALAAALQCEQGGCTIAAGSHADVTVVRTEKLSIGVDEVRDLVRRSALAPAGRRWQIMIVEDADRLTEHACNALLKAIEEPTERTVWMLCAPTVEDVLPTIRSRCRLLTLATPTAEDVAAFLVRQDGVADGLAAYAARASQGHIGRARALARDEATRNRRREVVTIPARLTSLGACMTAATNLAEVTKEEADLITTRLDEREKADLDAAYGVVERGRRPREYAPALAALERAQKTRAKRRQLDVVDRGLMDLVSVYRDAIAEATGATGPLVNEEIRGDVAEVVRGSTPELNLRRIGWIFQAREQMLEFNVPVPLALESMMLALKVPEADEKLRAQVARFVAGLRRLDLRKAPSIAETLDWARGLCALGVRELDAPTVRQTLSLVLKHEDDLRKAEGKVSALLKN

Samples

Sample ID Description Type Environment
1 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
95 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
96 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
97 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
100 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
107 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
108 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
109 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
110 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
116 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
119 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
120 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
121 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
160 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
171 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
172 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
173 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
181 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 2643221561 Nocardioides sp. Root151 Isolate Unclassified
186 2643221576 Nocardioides sp. Root614 Isolate Unclassified
187 2643221590 Nocardioides sp. Root682 Isolate Unclassified
188 2643221604 Nocardioides sp. Root190 Isolate Unclassified
189 2643221615 Nocardioides sp. Root224 Isolate Unclassified
190 2643221617 Nocardioides sp. Root79 Isolate Unclassified
191 2643221620 Nocardioides sp. Root240 Isolate Unclassified
192 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
193 2643221696 Nocardioides sp. Root140 Isolate Unclassified
194 2738541305 Nocardioides sp. CF167 Isolate Unclassified
195 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
196 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
197 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
198 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
199 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
200 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
201 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
202 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
203 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
204 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.73
Metatranscriptomes 0.82
Isolates 5.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.26
Nodule 0.27
Rhizoplane 9.26
Rhizosphere 76.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207662_10093404 3300025918 Bacteria 1854
2 Ga0070658_10022865 3300005327 Bacteria 5018
3 Ga0070658_10144199 3300005327 Bacteria 1990
4 Ga0070658_10183499 3300005327 Bacteria 1761
5 Ga0070658_10206637 3300005327 Bacteria 1658
6 Ga0070683_100082045 3300005329 Bacteria 3019
7 Ga0070680_100129278 3300005336 Bacteria 2112
8 Ga0070682_100006515 3300005337 Bacteria 6552
9 Ga0070682_100011001 3300005337 Bacteria 5158
10 Ga0070660_100012915 3300005339 Bacteria 5976
11 Ga0070660_100031955 3300005339 Bacteria 3958
12 Ga0070660_100037366 3300005339 Bacteria 3682
13 Ga0070687_100008219 3300005343 Bacteria 4406
14 Ga0070687_100205402 3300005343 Bacteria 1196
15 Ga0070674_100102610 3300005356 Bacteria 2086
16 Ga0070673_100071198 3300005364 Bacteria 2793
17 Ga0070659_100012004 3300005366 Bacteria 6413
18 Ga0070659_100032176 3300005366 Bacteria 4067
19 Ga0070714_100024859 3300005435 Bacteria 4937
20 Ga0070701_10028770 3300005438 Bacteria 2734
21 Ga0070700_100013538 3300005441 Bacteria 4582
22 Ga0070708_100068326 3300005445 Bacteria 3194
23 Ga0070663_100033795 3300005455 Bacteria 3536
24 Ga0068867_100007466 3300005459 Bacteria 7729
25 Ga0070698_100031275 3300005471 Bacteria 5518
26 Ga0070679_100015281 3300005530 Bacteria 7375
27 Ga0070672_100171884 3300005543 Bacteria 1802
28 Ga0070665_100001509 3300005548 Bacteria 27065
29 Ga0068855_100233029 3300005563 Bacteria 2060
30 Ga0070664_100042877 3300005564 Bacteria 3818
31 Ga0070664_100175747 3300005564 Bacteria 1901
32 Ga0070702_100031917 3300005615 Bacteria 2886
33 Ga0068864_100179570 3300005618 Bacteria 1935
34 Ga0068866_10084486 3300005718 Bacteria 1713
35 Ga0068861_100015215 3300005719 Bacteria 5416
36 Ga0068861_100017601 3300005719 Bacteria 5077
37 Ga0068870_10042873 3300005840 Bacteria 2358
38 Ga0068858_100084340 3300005842 Bacteria 2955
39 Ga0068860_100000779 3300005843 Bacteria 35851
40 Ga0081539_10035524 3300005985 Bacteria 2994
41 Ga0081539_10114294 3300005985 Bacteria 1352
42 Ga0075365_10007205 3300006038 Bacteria 6210
43 Ga0075365_10010615 3300006038 Bacteria 5376
44 Ga0075365_10044917 3300006038 Bacteria 2897
45 Ga0075365_10106159 3300006038 Bacteria 1927
46 Ga0075368_10001685 3300006042 Bacteria 7095
47 Ga0075363_100013177 3300006048 Bacteria 4000
48 Ga0075363_100019353 3300006048 Bacteria 3403
49 Ga0075363_100031434 3300006048 Bacteria 2753
50 Ga0075363_100033740 3300006048 Bacteria 2668
51 Ga0075363_100044629 3300006048 Bacteria 2349
52 Ga0075364_10012817 3300006051 Bacteria 5141
53 Ga0075364_10017674 3300006051 Bacteria 4459
54 Ga0075364_10159823 3300006051 Bacteria 1521
55 Ga0075367_10015532 3300006178 Bacteria 4143
56 Ga0097621_100262730 3300006237 Bacteria 1515
57 Ga0075370_10005963 3300006353 Bacteria 6099
58 Ga0075370_10016663 3300006353 Bacteria 3956
59 Ga0075431_100016472 3300006847 Bacteria 7504
60 Ga0075429_100050465 3300006880 Bacteria 3619
61 Ga0068865_100025349 3300006881 Bacteria 3900
62 Ga0068865_100288965 3300006881 Bacteria 1308
63 Ga0105245_10003245 3300009098 Bacteria 14575
64 Ga0105245_10374268 3300009098 Bacteria 1417
65 Ga0105245_10478696 3300009098 Bacteria 1258
66 Ga0114129_10021061 3300009147 Bacteria 9259
67 Ga0105243_10006672 3300009148 Bacteria 8911
68 Ga0105243_10125863 3300009148 Bacteria 2168
69 Ga0105243_10160925 3300009148 Bacteria 1935
70 Ga0105242_10256383 3300009176 Bacteria 1578
71 Ga0105248_10100746 3300009177 Bacteria 3255
72 Ga0105248_10100882 3300009177 Bacteria 3253
73 Ga0105237_10330547 3300009545 Bacteria 1528
74 Ga0105238_10406318 3300009551 Bacteria 1355
75 Ga0105249_10011499 3300009553 Bacteria 7774
76 Ga0105249_10248881 3300009553 Bacteria 1761
77 Ga0105249_10273600 3300009553 Bacteria 1683
78 Ga0105239_10002802 3300010375 Bacteria 21794
79 Ga0105239_10277207 3300010375 Bacteria 1887
80 Ga0105246_10017112 3300011119 Bacteria 4605
81 Ga0157369_10024422 3300013105 Bacteria 6724
82 Ga0163162_10004966 3300013306 Bacteria 12810
83 Ga0163162_10438405 3300013306 Bacteria 1438
84 Ga0157372_10027578 3300013307 Bacteria 6188
85 Ga0157372_10506252 3300013307 Bacteria 1408
86 Ga0157375_10032816 3300013308 Bacteria 4928
87 Ga0157375_10064711 3300013308 Bacteria 3642
88 Ga0157375_10134452 3300013308 Bacteria 2595
89 Ga0157375_10197742 3300013308 Bacteria 2166
90 Ga0157375_10242276 3300013308 Bacteria 1963
91 Ga0163163_10059573 3300014325 Bacteria 3777
92 Ga0163163_10227911 3300014325 Bacteria 1912
93 Ga0157380_10004766 3300014326 Bacteria 9448
94 Ga0157377_10079402 3300014745 Bacteria 1914
95 Ga0157379_10024901 3300014968 Bacteria 5312
96 Ga0157376_10099403 3300014969 Bacteria 2538
97 Ga0157376_10199989 3300014969 Bacteria 1838
98 Ga0163161_10026164 3300017792 Bacteria 4133
99 Ga0163161_10129116 3300017792 Bacteria 1905
100 Ga0206354_10305441 3300020081 Bacteria 2571
101 Ga0206353_10020790 3300020082 Bacteria 4970
102 Ga0206353_10074330 3300020082 Bacteria 1466
103 Ga0207642_10078509 3300025899 Bacteria 1595
104 Ga0207688_10038383 3300025901 Bacteria 2658
105 Ga0207647_10005286 3300025904 Bacteria 9494
106 Ga0207647_10008369 3300025904 Bacteria 7420
107 Ga0207643_10024031 3300025908 Bacteria 3363
108 Ga0207705_10112421 3300025909 Bacteria 2013
109 Ga0207705_10183645 3300025909 Bacteria 1579
110 Ga0207657_10032379 3300025919 Bacteria 4724
111 Ga0207657_10152482 3300025919 Bacteria 1881
112 Ga0207649_10101896 3300025920 Bacteria 1902
113 Ga0207687_10178024 3300025927 Bacteria 1645
114 Ga0207664_10013822 3300025929 Bacteria 5811
115 Ga0207690_10033785 3300025932 Bacteria 3291
116 Ga0207686_10145772 3300025934 Bacteria 1642
117 Ga0207709_10057363 3300025935 Bacteria 2414
118 Ga0207669_10069493 3300025937 Bacteria 2204
119 Ga0207691_10016216 3300025940 Bacteria 7073
120 Ga0207711_10037302 3300025941 Bacteria 4127
121 Ga0207711_10224402 3300025941 Bacteria 1719
122 Ga0207689_10143119 3300025942 Bacteria 1970
123 Ga0207661_10051097 3300025944 Bacteria 3297
124 Ga0207679_10054445 3300025945 Bacteria 2945
125 Ga0207679_10141061 3300025945 Bacteria 1948
126 Ga0207651_10064373 3300025960 Bacteria 2566
127 Ga0207712_10042705 3300025961 Bacteria 3124
128 Ga0207668_10216525 3300025972 Bacteria 1535
129 Ga0207703_10249153 3300026035 Bacteria 1600
130 Ga0207702_10248598 3300026078 Bacteria 1669
131 Ga0207648_10003002 3300026089 Bacteria 17826
132 Ga0207674_10007680 3300026116 Bacteria 12555
133 Ga0207675_100003598 3300026118 Bacteria 15106
134 Ga0207675_100027945 3300026118 Bacteria 5253
135 Ga0207698_10147216 3300026142 Bacteria 2038
136 Ga0207698_10176597 3300026142 Bacteria 1887
137 Ga0209813_10001187 3300027866 Bacteria 5807
138 Ga0209813_10006343 3300027866 Bacteria 2917
139 Ga0207428_10143363 3300027907 Bacteria 1822
140 Ga0268266_10002785 3300028379 Bacteria 18240
141 Ga0268264_10000478 3300028381 Bacteria 53545
142 Ga0268264_10231574 3300028381 Bacteria 1706
143 Ga0316575_10006083 3300031665 Bacteria 4326
144 Ga0316579_10032686 3300031691 Bacteria 2386
145 Ga0316576_10000647 3300031727 Bacteria 16856
146 Ga0316576_10005592 3300031727 Bacteria 7706
147 Ga0316576_10007255 3300031727 Bacteria 6959
148 Ga0316576_10007827 3300031727 Bacteria 6754
149 Ga0316578_10007533 3300031728 Bacteria 5467
150 Ga0307405_10042960 3300031731 Bacteria 2754
151 Ga0316577_10005984 3300031733 Bacteria 6409
152 Ga0307410_10113791 3300031852 Bacteria 1962
153 Ga0307410_10147773 3300031852 Bacteria 1746
154 Ga0307412_10123259 3300031911 Bacteria 1870
155 Ga0307409_100082184 3300031995 Bacteria 2607
156 Ga0307416_100005510 3300032002 Bacteria 7781
157 Ga0307416_100101203 3300032002 Bacteria 2509
158 Ga0307416_100137714 3300032002 Bacteria 2212
159 Ga0307416_100292908 3300032002 Bacteria 1612
160 Ga0307414_10114343 3300032004 Bacteria 2062
161 Ga0307415_100012095 3300032126 Bacteria 4976
162 Ga0307415_100122803 3300032126 Bacteria 1951
163 Ga0307415_100279114 3300032126 Bacteria 1373
164 Ga0316583_10004068 3300032133 Bacteria 5199
165 Ga0316585_10001136 3300032137 Bacteria 6919
166 Ga0373959_0024378 3300034820 Bacteria 1182
167 Ga0316574_0008983 3300035398 Bacteria 5580
168 Ga0316574_0023617 3300035398 Bacteria 3672
169 Ga0316584_0000620 3300036712 Bacteria 19243
170 Ga0316584_0060446 3300036712 Bacteria 2838
171 Ga0395900_0070657 3300037418 Bacteria 3589
172 Ga0395900_0233165 3300037418 Bacteria 1850
173 Ga0395905_0287486 3300037471 Bacteria 1531
174 Ga0316581_0022015 3300037588 Bacteria 1877
175 Ga0395901_0074390 3300038443 Bacteria 3544
176 Ga0395901_0689562 3300038443 Bacteria 1020
177 Ga0451837_0005205 3300041494 Bacteria 2030
178 Ga0466972_0022519 3300044658 Bacteria 3137
179 Ga0466972_0033995 3300044658 Bacteria 2500
180 Ga0466965_0011597 3300044683 Bacteria 4132
181 Ga0466965_0047469 3300044683 Bacteria 2126
182 Ga0466965_0066233 3300044683 Bacteria 1811
183 Ga0466963_0024127 3300044694 Bacteria 3870
184 Ga0466964_0015115 3300044706 Bacteria 2939
185 Ga0466964_0021229 3300044706 Bacteria 2510
186 Ga0466971_0033294 3300044719 Bacteria 2309
187 Ga0466970_0025524 3300044765 Bacteria 3094
188 Ga0466970_0026721 3300044765 Bacteria 3025
189 Ga0466957_0005039 3300044842 Bacteria 7394
190 Ga0466957_0059466 3300044842 Bacteria 2342
191 Ga0466957_0115651 3300044842 Bacteria 1705
192 Ga0466960_0018577 3300044901 Bacteria 3050
193 Ga0466960_0030007 3300044901 Bacteria 2500
194 Ga0466960_0045637 3300044901 Bacteria 2094
195 Ga0466960_0090889 3300044901 Bacteria 1556
196 Ga0466959_0091292 3300045049 Bacteria 2187
197 Ga0466958_0080950 3300045836 Bacteria 1998
198 Ga0466967_0002654 3300045976 Bacteria 11281
199 Ga0466967_0013804 3300045976 Bacteria 6261
200 Ga0466967_0034287 3300045976 Bacteria 4307
201 Ga0466967_0041502 3300045976 Bacteria 3967
202 Ga0466967_0069388 3300045976 Bacteria 3150
203 Ga0466967_0160636 3300045976 Bacteria 2109
204 Ga0466967_0278971 3300045976 Bacteria 1603
205 Ga0496100_0046583 3300048903 Bacteria 2789
206 Ga0496100_0060425 3300048903 Bacteria 2494
207 Ga0496101_0099764 3300048904 Bacteria 2171
208 Ga0496102_0019201 3300048905 Bacteria 6019
209 Ga0496102_0020116 3300048905 Bacteria 5892
210 Ga0496102_0062457 3300048905 Bacteria 3411
211 Ga0496102_0064233 3300048905 Bacteria 3362
212 Ga0496102_0089085 3300048905 Bacteria 2854
213 Ga0496103_0111516 3300048906 Bacteria 1738
214 Ga0496104_0013381 3300048907 Bacteria 7393
215 Ga0496104_0090258 3300048907 Bacteria 2928
216 Ga0496105_0065377 3300048908 Bacteria 3002
217 Ga0496106_0007343 3300048909 Bacteria 8146
218 Ga0496107_0041940 3300048910 Bacteria 3287
219 Ga0496107_0042850 3300048910 Bacteria 3251
220 Ga0496107_0182206 3300048910 Bacteria 1560
221 Ga0496108_0054565 3300048911 Bacteria 3354
222 Ga0496108_0058536 3300048911 Bacteria 3239
223 Ga0496108_0253494 3300048911 Bacteria 1531
224 Ga0496109_0033851 3300048912 Bacteria 4599
225 Ga0496109_0174140 3300048912 Bacteria 2020
226 Ga0496109_0182676 3300048912 Bacteria 1970
227 Ga0496110_0118044 3300048913 Bacteria 2389
228 Ga0496110_0283152 3300048913 Bacteria 1510
229 Ga0496111_0092485 3300048914 Bacteria 2217
230 Ga0496111_0178622 3300048914 Bacteria 1578
231 Ga0496114_0002475 3300048917 Bacteria 14100
232 Ga0496114_0055669 3300048917 Bacteria 3299
233 Ga0496114_0071768 3300048917 Bacteria 2910
234 Ga0496114_0131542 3300048917 Bacteria 2161
235 Ga0496114_0153019 3300048917 Bacteria 2001
236 Ga0496115_0001142 3300048918 Bacteria 19160
237 Ga0496115_0025625 3300048918 Bacteria 4594
238 Ga0496115_0058526 3300048918 Bacteria 3101
239 Ga0501031_0018902 3300049568 Bacteria 4486
240 Ga0501032_0000558 3300049569 Bacteria 30209
241 Ga0501032_0016741 3300049569 Bacteria 5151
242 Ga0501032_0031777 3300049569 Bacteria 3619
243 Ga0501032_0036440 3300049569 Bacteria 3357
244 Ga0501033_0002250 3300049570 Bacteria 16530
245 Ga0501034_0007257 3300049571 Bacteria 11826
246 Ga0501034_0144566 3300049571 Bacteria 2356
247 Ga0501034_0391431 3300049571 Bacteria 1314
248 Ga0501036_0000585 3300049572 Bacteria 26362
249 Ga0501036_0019831 3300049572 Bacteria 5646
250 Ga0501036_0021943 3300049572 Bacteria 5369
251 Ga0501037_0016925 3300049573 Bacteria 5365
252 Ga0501037_0072460 3300049573 Bacteria 2505
253 Ga0501037_0128945 3300049573 Bacteria 1814
254 Ga0501038_0023541 3300049574 Bacteria 5504
255 Ga0501038_0057070 3300049574 Bacteria 3353
256 Ga0501038_0115201 3300049574 Bacteria 2222
257 Ga0501038_0174841 3300049574 Bacteria 1736
258 Ga0501039_0011629 3300049575 Bacteria 6702
259 Ga0501039_0012026 3300049575 Bacteria 6595
260 Ga0501039_0161053 3300049575 Bacteria 1764
261 Ga0501040_0010602 3300049576 Bacteria 6027
262 Ga0501042_0014770 3300049578 Bacteria 5332
263 Ga0501042_0051099 3300049578 Bacteria 2949
264 Ga0501046_0000836 3300049580 Bacteria 29998
265 Ga0501046_0024760 3300049580 Bacteria 4919
266 Ga0501046_0084520 3300049580 Bacteria 2447
267 Ga0501046_0085751 3300049580 Bacteria 2428
268 Ga0501047_0146234 3300049581 Bacteria 2240
269 Ga0501047_0337110 3300049581 Bacteria 1346
270 Ga0501048_0002644 3300049582 Bacteria 13692
271 Ga0501048_0018599 3300049582 Bacteria 5108
272 Ga0501048_0194361 3300049582 Bacteria 1438
273 Ga0501048_0248437 3300049582 Bacteria 1263
274 Ga0501067_0000199 3300049583 Bacteria 33865
275 Ga0501067_0034793 3300049583 Bacteria 2796
276 Ga0501067_0064186 3300049583 Bacteria 2033
277 Ga0501067_0101318 3300049583 Bacteria 1600
278 Ga0501068_0008285 3300049584 Bacteria 5777
279 Ga0501069_0025301 3300049585 Bacteria 3243
280 Ga0501069_0063570 3300049585 Bacteria 2062
281 Ga0501069_0076861 3300049585 Bacteria 1877
282 Ga0501069_0080373 3300049585 Bacteria 1836
283 Ga0501070_0002631 3300049586 Bacteria 15679
284 Ga0501070_0030832 3300049586 Bacteria 4491
285 Ga0501070_0058738 3300049586 Bacteria 3188
286 Ga0501070_0089476 3300049586 Bacteria 2548
287 Ga0501070_0098032 3300049586 Bacteria 2424
288 Ga0501070_0296551 3300049586 Bacteria 1317
289 Ga0501071_0018201 3300049587 Bacteria 4859
290 Ga0501071_0022445 3300049587 Bacteria 4399
291 Ga0501071_0030957 3300049587 Bacteria 3789
292 Ga0501071_0303369 3300049587 Bacteria 1211
293 Ga0501072_0012234 3300049588 Bacteria 6558
294 Ga0501072_0014311 3300049588 Bacteria 6080
295 Ga0501072_0022370 3300049588 Bacteria 4904
296 Ga0501072_0058743 3300049588 Bacteria 3031
297 Ga0501072_0356209 3300049588 Bacteria 1162
298 Ga0501073_0004597 3300049589 Bacteria 10373
299 Ga0501073_0023544 3300049589 Bacteria 4422
300 Ga0501074_0002892 3300049590 Bacteria 12046
301 Ga0501074_0005877 3300049590 Bacteria 8849
302 Ga0501074_0011041 3300049590 Bacteria 6557
303 Ga0501074_0092867 3300049590 Bacteria 2161
304 Ga0501076_0009166 3300049592 Bacteria 7293
305 Ga0501076_0182302 3300049592 Bacteria 1712
306 Ga0501077_0040401 3300049593 Bacteria 2972
307 Ga0501079_0023123 3300049741 Bacteria 4771
308 Ga0501079_0081092 3300049741 Bacteria 2508
309 Ga0501080_0001530 3300049742 Bacteria 19540
310 Ga0501080_0029141 3300049742 Bacteria 5139
311 Ga0501080_0043844 3300049742 Bacteria 4165
312 Ga0501081_0071610 3300049743 Bacteria 2416
313 Ga0501035_0048205 3300049822 Bacteria 3821
314 Ga0501035_0062438 3300049822 Bacteria 3315
315 Ga0501035_0129199 3300049822 Bacteria 2203
316 Ga0501044_0068661 3300049823 Bacteria 3610
317 Ga0501044_0378450 3300049823 Bacteria 1331
318 Ga0501045_0078455 3300049824 Bacteria 2434
319 Ga0501045_0109995 3300049824 Bacteria 2043
320 nmdc:mga03683_403_c1 3300050489 Bacteria 12439
321 nmdc:mga03n38_43999_c1 3300050490 Bacteria 1959
322 nmdc:mga03n38_48807_c1 3300050490 Bacteria 1879
323 nmdc:mga03n38_6626_c1 3300050490 Bacteria 4040
324 nmdc:mga00v17_15241_c1 3300050491 Bacteria 4311
325 nmdc:mga00v17_19182_c1 3300050491 Bacteria 3900
326 nmdc:mga0yw44_13083_c1 3300050492 Bacteria 4354
327 nmdc:mga0yw44_18654_c1 3300050492 Bacteria 3806
328 nmdc:mga0yw44_20534_c1 3300050492 Bacteria 3668
329 nmdc:mga0yw44_921_c1 3300050492 Bacteria 11136
330 nmdc:mga06z11_3020_c1 3300050494 Bacteria 6475
331 nmdc:mga07m45_12282_c1 3300050496 Bacteria 4523
332 nmdc:mga07m45_142512_c1 3300050496 Bacteria 1388
333 nmdc:mga05p37_5306_c2 3300050507 Bacteria 11790
334 nmdc:mga06r32_8883_c1 3300050510 Bacteria 9056
335 nmdc:mga0sz30_76294_c1 3300050516 Bacteria 1447
336 Ga0495619_0028290 3300053085 Bacteria 3615
337 Ga0500556_0000918 3300053104 Bacteria 16183
338 Ga0500573_0006368 3300053140 Bacteria 6382
339 Ga0501084_0016459 3300054114 Bacteria 6141
340 Ga0501084_0025509 3300054114 Bacteria 4931
341 Ga0501084_0035253 3300054114 Bacteria 4183
342 Ga0501082_0058023 3300060353 Bacteria 3335
343 Ga0501082_0074564 3300060353 Bacteria 2923
344 Ga0501082_0089578 3300060353 Bacteria 2656
345 Ga0501082_0093408 3300060353 Bacteria 2599
346 Ga0501082_0131970 3300060353 Bacteria 2167
347 Ga0530510_0022778 3300061734 Bacteria 4463
348 2643824828 2643221561 Bacteria 4984412
349 2643892613 2643221576 Bacteria 5214352
350 2643962062 2643221590 Bacteria 5214697
351 2644034769 2643221604 Bacteria 5014917
352 2644093260 2643221615 Bacteria 5487866
353 2644098734 2643221617 Bacteria 5139111
354 2644116095 2643221620 Bacteria 5134593
355 2644322871 2643221657 Bacteria 5490246
356 2644532621 2643221696 Bacteria 5431823
357 2738872001 2738541305 Bacteria 4910150
358 2774395691 2773857762 Bacteria 5971770
359 2809199017 2808606439 Bacteria 5952208
360 2812329951 2811994874 Bacteria 5367947
361 2812348220 2811994878 Bacteria 5992952
362 2837271594 2837268691 Bacteria 7850704
363 2855390072 2855386786 Bacteria 4752232
364 2868094155 2868088558 Bacteria 7609351
365 2883822632 2883821847 Bacteria 5121194
366 2891968436 2891968417 Bacteria 5821697
367 8054614164 8054609563 Bacteria 5170090
368 Ga0207662_10093404
369 Ga0070658_10022865
370 Ga0070658_10144199
371 Ga0070658_10183499
372 Ga0070658_10206637
373 Ga0070683_100082045
374 Ga0070680_100129278
375 Ga0070682_100006515
376 Ga0070682_100011001
377 Ga0070660_100012915
378 Ga0070660_100031955
379 Ga0070660_100037366
380 Ga0070687_100008219
381 Ga0070687_100205402
382 Ga0070674_100102610
383 Ga0070673_100071198
384 Ga0070659_100012004
385 Ga0070659_100032176
386 Ga0070714_100024859
387 Ga0070701_10028770
388 Ga0070700_100013538
389 Ga0070708_100068326
390 Ga0070663_100033795
391 Ga0068867_100007466
392 Ga0070698_100031275
393 Ga0070679_100015281
394 Ga0070672_100171884
395 Ga0070665_100001509
396 Ga0068855_100233029
397 Ga0070664_100042877
398 Ga0070664_100175747
399 Ga0070702_100031917
400 Ga0068864_100179570
401 Ga0068866_10084486
402 Ga0068861_100015215
403 Ga0068861_100017601
404 Ga0068870_10042873
405 Ga0068858_100084340
406 Ga0068860_100000779
407 Ga0081539_10035524
408 Ga0081539_10114294
409 Ga0075365_10007205
410 Ga0075365_10010615
411 Ga0075365_10044917
412 Ga0075365_10106159
413 Ga0075368_10001685
414 Ga0075363_100013177
415 Ga0075363_100019353
416 Ga0075363_100031434
417 Ga0075363_100033740
418 Ga0075363_100044629
419 Ga0075364_10012817
420 Ga0075364_10017674
421 Ga0075364_10159823
422 Ga0075367_10015532
423 Ga0097621_100262730
424 Ga0075370_10005963
425 Ga0075370_10016663
426 Ga0075431_100016472
427 Ga0075429_100050465
428 Ga0068865_100025349
429 Ga0068865_100288965
430 Ga0105245_10003245
431 Ga0105245_10374268
432 Ga0105245_10478696
433 Ga0114129_10021061
434 Ga0105243_10006672
435 Ga0105243_10125863
436 Ga0105243_10160925
437 Ga0105242_10256383
438 Ga0105248_10100746
439 Ga0105248_10100882
440 Ga0105237_10330547
441 Ga0105238_10406318
442 Ga0105249_10011499
443 Ga0105249_10248881
444 Ga0105249_10273600
445 Ga0105239_10002802
446 Ga0105239_10277207
447 Ga0105246_10017112
448 Ga0157369_10024422
449 Ga0163162_10004966
450 Ga0163162_10438405
451 Ga0157372_10027578
452 Ga0157372_10506252
453 Ga0157375_10032816
454 Ga0157375_10064711
455 Ga0157375_10134452
456 Ga0157375_10197742
457 Ga0157375_10242276
458 Ga0163163_10059573
459 Ga0163163_10227911
460 Ga0157380_10004766
461 Ga0157377_10079402
462 Ga0157379_10024901
463 Ga0157376_10099403
464 Ga0157376_10199989
465 Ga0163161_10026164
466 Ga0163161_10129116
467 Ga0206354_10305441
468 Ga0206353_10020790
469 Ga0206353_10074330
470 Ga0207642_10078509
471 Ga0207688_10038383
472 Ga0207647_10005286
473 Ga0207647_10008369
474 Ga0207643_10024031
475 Ga0207705_10112421
476 Ga0207705_10183645
477 Ga0207657_10032379
478 Ga0207657_10152482
479 Ga0207649_10101896
480 Ga0207687_10178024
481 Ga0207664_10013822
482 Ga0207690_10033785
483 Ga0207686_10145772
484 Ga0207709_10057363
485 Ga0207669_10069493
486 Ga0207691_10016216
487 Ga0207711_10037302
488 Ga0207711_10224402
489 Ga0207689_10143119
490 Ga0207661_10051097
491 Ga0207679_10054445
492 Ga0207679_10141061
493 Ga0207651_10064373
494 Ga0207712_10042705
495 Ga0207668_10216525
496 Ga0207703_10249153
497 Ga0207702_10248598
498 Ga0207648_10003002
499 Ga0207674_10007680
500 Ga0207675_100003598
501 Ga0207675_100027945
502 Ga0207698_10147216
503 Ga0207698_10176597
504 Ga0209813_10001187
505 Ga0209813_10006343
506 Ga0207428_10143363
507 Ga0268266_10002785
508 Ga0268264_10000478
509 Ga0268264_10231574
510 Ga0316575_10006083
511 Ga0316579_10032686
512 Ga0316576_10000647
513 Ga0316576_10005592
514 Ga0316576_10007255
515 Ga0316576_10007827
516 Ga0316578_10007533
517 Ga0307405_10042960
518 Ga0316577_10005984
519 Ga0307410_10113791
520 Ga0307410_10147773
521 Ga0307412_10123259
522 Ga0307409_100082184
523 Ga0307416_100005510
524 Ga0307416_100101203
525 Ga0307416_100137714
526 Ga0307416_100292908
527 Ga0307414_10114343
528 Ga0307415_100012095
529 Ga0307415_100122803
530 Ga0307415_100279114
531 Ga0316583_10004068
532 Ga0316585_10001136
533 Ga0373959_0024378
534 Ga0316574_0008983
535 Ga0316574_0023617
536 Ga0316584_0000620
537 Ga0316584_0060446
538 Ga0395900_0070657
539 Ga0395900_0233165
540 Ga0395905_0287486
541 Ga0316581_0022015
542 Ga0395901_0074390
543 Ga0395901_0689562
544 Ga0451837_0005205
545 Ga0466972_0022519
546 Ga0466972_0033995
547 Ga0466965_0011597
548 Ga0466965_0047469
549 Ga0466965_0066233
550 Ga0466963_0024127
551 Ga0466964_0015115
552 Ga0466964_0021229
553 Ga0466971_0033294
554 Ga0466970_0025524
555 Ga0466970_0026721
556 Ga0466957_0005039
557 Ga0466957_0059466
558 Ga0466957_0115651
559 Ga0466960_0018577
560 Ga0466960_0030007
561 Ga0466960_0045637
562 Ga0466960_0090889
563 Ga0466959_0091292
564 Ga0466958_0080950
565 Ga0466967_0002654
566 Ga0466967_0013804
567 Ga0466967_0034287
568 Ga0466967_0041502
569 Ga0466967_0069388
570 Ga0466967_0160636
571 Ga0466967_0278971
572 Ga0496100_0046583
573 Ga0496100_0060425
574 Ga0496101_0099764
575 Ga0496102_0019201
576 Ga0496102_0020116
577 Ga0496102_0062457
578 Ga0496102_0064233
579 Ga0496102_0089085
580 Ga0496103_0111516
581 Ga0496104_0013381
582 Ga0496104_0090258
583 Ga0496105_0065377
584 Ga0496106_0007343
585 Ga0496107_0041940
586 Ga0496107_0042850
587 Ga0496107_0182206
588 Ga0496108_0054565
589 Ga0496108_0058536
590 Ga0496108_0253494
591 Ga0496109_0033851
592 Ga0496109_0174140
593 Ga0496109_0182676
594 Ga0496110_0118044
595 Ga0496110_0283152
596 Ga0496111_0092485
597 Ga0496111_0178622
598 Ga0496114_0002475
599 Ga0496114_0055669
600 Ga0496114_0071768
601 Ga0496114_0131542
602 Ga0496114_0153019
603 Ga0496115_0001142
604 Ga0496115_0025625
605 Ga0496115_0058526
606 Ga0501031_0018902
607 Ga0501032_0000558
608 Ga0501032_0016741
609 Ga0501032_0031777
610 Ga0501032_0036440
611 Ga0501033_0002250
612 Ga0501034_0007257
613 Ga0501034_0144566
614 Ga0501034_0391431
615 Ga0501036_0000585
616 Ga0501036_0019831
617 Ga0501036_0021943
618 Ga0501037_0016925
619 Ga0501037_0072460
620 Ga0501037_0128945
621 Ga0501038_0023541
622 Ga0501038_0057070
623 Ga0501038_0115201
624 Ga0501038_0174841
625 Ga0501039_0011629
626 Ga0501039_0012026
627 Ga0501039_0161053
628 Ga0501040_0010602
629 Ga0501042_0014770
630 Ga0501042_0051099
631 Ga0501046_0000836
632 Ga0501046_0024760
633 Ga0501046_0084520
634 Ga0501046_0085751
635 Ga0501047_0146234
636 Ga0501047_0337110
637 Ga0501048_0002644
638 Ga0501048_0018599
639 Ga0501048_0194361
640 Ga0501048_0248437
641 Ga0501067_0000199
642 Ga0501067_0034793
643 Ga0501067_0064186
644 Ga0501067_0101318
645 Ga0501068_0008285
646 Ga0501069_0025301
647 Ga0501069_0063570
648 Ga0501069_0076861
649 Ga0501069_0080373
650 Ga0501070_0002631
651 Ga0501070_0030832
652 Ga0501070_0058738
653 Ga0501070_0089476
654 Ga0501070_0098032
655 Ga0501070_0296551
656 Ga0501071_0018201
657 Ga0501071_0022445
658 Ga0501071_0030957
659 Ga0501071_0303369
660 Ga0501072_0012234
661 Ga0501072_0014311
662 Ga0501072_0022370
663 Ga0501072_0058743
664 Ga0501072_0356209
665 Ga0501073_0004597
666 Ga0501073_0023544
667 Ga0501074_0002892
668 Ga0501074_0005877
669 Ga0501074_0011041
670 Ga0501074_0092867
671 Ga0501076_0009166
672 Ga0501076_0182302
673 Ga0501077_0040401
674 Ga0501079_0023123
675 Ga0501079_0081092
676 Ga0501080_0001530
677 Ga0501080_0029141
678 Ga0501080_0043844
679 Ga0501081_0071610
680 Ga0501035_0048205
681 Ga0501035_0062438
682 Ga0501035_0129199
683 Ga0501044_0068661
684 Ga0501044_0378450
685 Ga0501045_0078455
686 Ga0501045_0109995
687 nmdc:mga03683_403_c1
688 nmdc:mga03n38_43999_c1
689 nmdc:mga03n38_48807_c1
690 nmdc:mga03n38_6626_c1
691 nmdc:mga00v17_15241_c1
692 nmdc:mga00v17_19182_c1
693 nmdc:mga0yw44_13083_c1
694 nmdc:mga0yw44_18654_c1
695 nmdc:mga0yw44_20534_c1
696 nmdc:mga0yw44_921_c1
697 nmdc:mga06z11_3020_c1
698 nmdc:mga07m45_12282_c1
699 nmdc:mga07m45_142512_c1
700 nmdc:mga05p37_5306_c2
701 nmdc:mga06r32_8883_c1
702 nmdc:mga0sz30_76294_c1
703 Ga0495619_0028290
704 Ga0500556_0000918
705 Ga0500573_0006368
706 Ga0501084_0016459
707 Ga0501084_0025509
708 Ga0501084_0035253
709 Ga0501082_0058023
710 Ga0501082_0074564
711 Ga0501082_0089578
712 Ga0501082_0093408
713 Ga0501082_0131970
714 Ga0530510_0022778
715 2643824828
716 2643892613
717 2643962062
718 2644034769
719 2644093260
720 2644098734
721 2644116095
722 2644322871
723 2644532621
724 2738872001
725 2774395691
726 2809199017
727 2812329951
728 2812348220
729 2837271594
730 2855390072
731 2868094155
732 2883822632
733 2891968436
734 8054614164

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13177

DNA_pol3_delta2

DNA polymerase III, delta subunit

9

158

0.97

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

30

155

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
1njf-assembly4.cif.gz_D nucleotide bound form of an isolated e. coli clamp loader gamma subunit 0.8526 13 209
2chg-assembly3.cif.gz_C replication factor c domains 1 and 2 0.774 11 206
8ooc-assembly1.cif.gz_C cryoem structure ino80core hexasome complex rvb core refinement state1 0.773 115 210
2c9o-assembly1.cif.gz_A 3d structure of the human ruvb-like helicase ruvbl1 0.7719 115 210
8euf-assembly1.cif.gz_T class2 of the ino80-nucleosome complex 0.7677 116 209
ID Description Score Start End Superfamily
af_O06363_3_179_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9717 9 169 3.40.50.300
af_Q2G2X1_1_121_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9053 47 167 3.40.50.300
3gliB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9012 13 170 3.40.50.300
af_F4KEM0_335_511_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8811 13 168 3.40.50.300
af_O06363_3_179_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.88 9 169 3.40.50.300
ID Description Score Start End GO Terms
AF-X7XQN1-F1-model_v4 deleted 0.9725 32 206
AF-A0A1C5G0D5-F1-model_v4 DNA polymerase-3 subunit delta 0.9722 8 240 GO:0006261
GO:0016887
AF-A0A7K3DMY3-F1-model_v4 DNA polymerase III subunit delta (EC 2.7.7.7) 0.9701 8 383 GO:0003887
GO:0006261
AF-A0A3N1DC18-F1-model_v4 DNA polymerase III subunit delta' (EC 2.7.7.7) 0.9667 7 383 GO:0003677
GO:0003887
GO:0006261
GO:0009360
AF-A0A1D2IFE1-F1-model_v4 DNA polymerase III subunit tau (EC 2.7.7.7) 0.9643 8 383 GO:0003887
GO:0006261

Map