F424143

General Info

Members Datasets Scaffolds Average Seq Length
366 271 266 960

Family's Representative Sequence

Representative Sequence 3300048927|Ga0496124_0000037|Ga0496124_0000037_254188_257217
Length 1009
Sequence MTITSDRGTSTSGRNAFGEPVDLHLPGGTAPHSTSTLSVRGARVHNLRDVDLEIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYMRLLWARIGIPHCPVCGEVISKQSVQQIADQLMEFESGTRFQVLAPVISKKKGEFVDLFQELAASGYARAIVDGERIQLSDPPKLKKQVKHDISVIVDRLVSNEDILGRLTDSLETALRLTDGTVAIDLVDAEGPGAVRTYSENLSCPNNHPLALTEIEPRTFSFNAPFGACPECSGLGTRMSVDPDLVLGDPEASLRDGVLLPWTGTSGLYSYFEKLLAGLGKELGFDLDTPWSKLDASVQAAILTGKDFQVSVSWRNRFGREMRYTSGFEGVMPYIERKFAEAESDSQRQRFQGYLREVPCPVCEGTRLKPEVLAVSVDGRSIADVTEMSLDNAYAFMDSLTLTEREAHIAAAVLREIRARLEFLLEVGLNYLTLARGAGGLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRLIDTLVKLKDLGNTLIVVEHDEDTIRTADWVVDIGPGAGVNGGNVVHSGSYEGIIENRESITGDYLAGRRAIEVPAERRKVNLKRTISVQGARANNLKSIDADFPLGVFTAVTGVSGSGKSTLVNDILYKVLANQLNGARHIAGKHTRVKGLDQLDKVVHVDQAPIGRTPRSNPATYTGVFDRIRQLFAETPEAKARGYQPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVACEVCGGARYNRETLQVHYKGKDISEVLDMPISEAAEFFEPISAIHRYMATLVDVGLGYVRLGQSATTLSGGEAQRVKLATELQRRSNGRTVYVLDEPTTGLHFEDVRKLLLVLQSLVDKGNTVITIEHNLDVIKSADWLIDMGPEGGSGGGTVLATGTPEHVANVPESHTGVFLKEIFDAQDARVGKQQAVGARTASQKAQKPSKQKAGAR

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
3 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
4 2643221546 Microbacterium sp. Root53 Isolate Unclassified
5 2643221549 Agromyces sp. Root1464 Isolate Unclassified
6 2643221553 Microbacterium sp. Root553 Isolate Unclassified
7 2643221566 Microbacterium sp. Root166 Isolate Unclassified
8 2643221572 Leifsonia sp. Root60 Isolate Unclassified
9 2643221575 Microbacterium sp. Root61 Isolate Unclassified
10 2643221597 Microbacterium sp. Root180 Isolate Unclassified
11 2643221616 Leifsonia sp. Root227 Isolate Unclassified
12 2643221619 Agromyces sp. Root81 Isolate Unclassified
13 2643221630 Microbacterium sp. Root322 Isolate Unclassified
14 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
15 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
16 2643221649 Leifsonia sp. Root4 Isolate Unclassified
17 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
18 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
19 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
20 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
21 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
22 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
23 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
24 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
25 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
26 2773857759 Microbacterium sp. 1294 Isolate Unclassified
27 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
28 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
29 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
30 2808606372 Agromyces sp. 23-23 Isolate Unclassified
31 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
32 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
33 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
34 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
35 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
36 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
37 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
38 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
39 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
40 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
41 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
42 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
43 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
44 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
45 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
46 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
47 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
48 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
49 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
50 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
51 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
52 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
53 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
54 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
55 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
56 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
57 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
58 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
59 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
60 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
61 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
62 2919069694 Microbacterium sp. 1154 Isolate Unclassified
63 2919395869 Microbacterium resistens 2980 Isolate Unclassified
64 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
65 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
66 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
67 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
68 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
69 2928153084 Leifsonia sp. 563 Isolate Unclassified
70 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
71 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
72 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
73 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
74 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
75 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
76 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
77 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
78 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
79 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
80 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
81 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
82 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
83 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
84 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
85 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
86 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
87 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
88 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
89 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
90 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
91 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
92 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
93 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
94 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
95 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
96 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
97 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
98 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
99 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
100 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
101 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
102 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
103 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
104 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
105 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
106 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
107 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
108 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
109 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
110 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
111 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
112 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
113 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
114 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
115 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
116 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
117 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
118 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
119 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
120 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
121 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
122 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
123 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
124 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
125 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
126 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
127 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
128 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
134 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
135 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
136 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
139 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
156 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
157 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
158 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
159 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
160 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
161 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
162 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
163 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
164 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
165 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
166 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
167 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
168 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
169 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
170 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
171 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
172 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
173 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
174 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
175 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
176 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
177 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
178 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
179 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
180 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
181 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
182 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
183 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
184 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
185 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
186 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
187 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
188 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
189 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
190 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
191 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
192 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
193 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
194 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
195 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
196 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
197 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
198 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
199 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
200 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
201 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
202 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
203 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
204 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
205 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
206 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
207 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
208 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
209 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
210 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
211 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
212 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
213 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
214 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
215 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
216 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
217 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
218 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
220 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
221 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
222 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
223 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
224 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
225 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
227 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
228 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
229 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
230 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
231 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
232 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
233 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
234 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
235 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
236 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
237 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
238 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
239 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
240 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
241 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
242 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
243 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
244 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
245 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
246 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
247 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
248 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
249 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
250 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
251 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
252 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
253 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
254 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
255 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
256 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
257 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
258 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
259 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
260 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
261 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
262 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
263 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
264 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
265 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
266 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
267 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
268 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
269 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
270 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
271 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.68
Metatranscriptomes 0
Isolates 27.32

Biome Distribution

Category Percentage (%)
Aerial Root 0.82
Bulb 0
Endosphere 12.57
Nodule 0
Rhizoplane 4.1
Rhizosphere 57.38
Stem 0
Stem Tuber 0.27
Unclassified 24.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10004243 3300001979 Bacteria 6177
2 JGI24735J21928_10001503 3300002067 Bacteria 8249
3 JGI25154J39366_1001606 3300002738 Bacteria 7686
4 JGI25164J39214_1000773 3300002772 Bacteria 11667
5 JGI25165J46597_1000330 3300003214 Bacteria 56543
6 Ga0055539_1000008 3300003752 Bacteria 537665
7 Ga0055533_1000001 3300003756 Bacteria 1863437
8 Ga0055525_1000569 3300003759 Bacteria 16457
9 Ga0055527_1000001 3300003760 Bacteria 850044
10 Ga0055529_1000018 3300003763 Bacteria 344344
11 Ga0055541_1002703 3300003841 Bacteria 3470
12 Ga0070658_10027919 3300005327 Bacteria 4529
13 Ga0070660_100004698 3300005339 Bacteria 9457
14 Ga0070711_100006899 3300005439 Bacteria 6884
15 Ga0070684_100039425 3300005535 Bacteria 4063
16 Ga0070693_100013812 3300005547 Bacteria 4121
17 Ga0068855_100001400 3300005563 Bacteria 29906
18 Ga0068855_100040938 3300005563 Bacteria 5494
19 Ga0068857_100007435 3300005577 Bacteria 9429
20 Ga0068851_10000061 3300005834 Bacteria 60738
21 Ga0075365_10002020 3300006038 Bacteria 9632
22 Ga0070712_100029134 3300006175 Bacteria 3699
23 Ga0075369_10001250 3300006186 Bacteria 8640
24 Ga0075428_100000928 3300006844 Bacteria 30979
25 Ga0075430_100020991 3300006846 Bacteria 5552
26 Ga0075434_100007623 3300006871 Bacteria 10013
27 Ga0075434_100017274 3300006871 Bacteria 6948
28 Ga0075435_100045672 3300007076 Bacteria 3512
29 Ga0105240_10002502 3300009093 Bacteria 29534
30 Ga0105245_10005677 3300009098 Bacteria 10967
31 Ga0114129_10001569 3300009147 Bacteria 31005
32 Ga0105241_10000229 3300009174 Bacteria 42324
33 Ga0105237_10000827 3300009545 Bacteria 42359
34 Ga0105238_10000640 3300009551 Bacteria 36820
35 Ga0105246_10014967 3300011119 Bacteria 4889
36 Ga0157369_10000408 3300013105 Bacteria 57117
37 Ga0157369_10007844 3300013105 Bacteria 12281
38 Ga0171462_1003 3300013250 Bacteria 853796
39 Ga0157374_10035658 3300013296 Bacteria 4551
40 Ga0163163_10010338 3300014325 Bacteria 8384
41 Ga0209566_100050 3300025225 Bacteria 234653
42 Ga0209674_100001 3300025226 Bacteria 4013750
43 Ga0209672_100006 3300025228 Bacteria 1004497
44 Ga0209147_100484 3300025229 Bacteria 23911
45 Ga0209563_100001 3300025230 Bacteria 4013775
46 Ga0209563_100524 3300025230 Bacteria 12967
47 Ga0207427_100052 3300025231 Bacteria 218228
48 Ga0209437_100484 3300025233 Bacteria 29919
49 Ga0209646_1000071 3300025246 Bacteria 228702
50 Ga0209677_100001 3300025253 Bacteria 4013787
51 Ga0209677_100838 3300025253 Bacteria 15233
52 Ga0209148_1000015 3300025254 Bacteria 850103
53 Ga0209148_1000498 3300025254 Bacteria 40127
54 Ga0209233_1000001 3300025261 Bacteria 2992747
55 Ga0209455_1000013 3300025272 Bacteria 850103
56 Ga0209455_1000903 3300025272 Bacteria 15459
57 Ga0207656_10000012 3300025321 Bacteria 190545
58 Ga0207655_1007378 3300025728 Bacteria 7134
59 Ga0207688_10005589 3300025901 Bacteria 6836
60 Ga0207647_10020010 3300025904 Bacteria 4493
61 Ga0207654_10000003 3300025911 Bacteria 1030378
62 Ga0207695_10002929 3300025913 Bacteria 24640
63 Ga0207695_10028891 3300025913 Bacteria 6138
64 Ga0207671_10000002 3300025914 Bacteria 1144816
65 Ga0207671_10030654 3300025914 Bacteria 4009
66 Ga0207663_10001530 3300025916 Bacteria 10820
67 Ga0207660_10040745 3300025917 Bacteria 3253
68 Ga0207657_10009599 3300025919 Bacteria 9711
69 Ga0207694_10000061 3300025924 Bacteria 141236
70 Ga0207687_10001527 3300025927 Bacteria 15872
71 Ga0207687_10023740 3300025927 Bacteria 4090
72 Ga0207687_10040295 3300025927 Bacteria 3201
73 Ga0207667_10002096 3300025949 Bacteria 24999
74 Ga0207667_10002706 3300025949 Bacteria 21925
75 Ga0207667_10039186 3300025949 Bacteria 5052
76 Ga0207703_10000044 3300026035 Bacteria 158471
77 Ga0207702_10024136 3300026078 Bacteria 5046
78 Ga0207674_10003026 3300026116 Bacteria 20834
79 Ga0265338_10011690 3300028800 Bacteria 10107
80 Ga0265327_10003007 3300031251 Bacteria 16728
81 Ga0307514_10003710 3300031649 Bacteria 14428
82 Ga0307406_10002452 3300031901 Bacteria 10105
83 Ga0373937_0077089 3300036401 Bacteria 3080
84 Ga0373925_0004339 3300037068 Bacteria 10731
85 Ga0395899_0035889 3300037312 Bacteria 3720
86 Ga0395900_0005064 3300037418 Bacteria 13829
87 Ga0395900_0078338 3300037418 Bacteria 3396
88 Ga0395898_0000131 3300037466 Bacteria 192369
89 Ga0466965_0000005 3300044683 Bacteria 185168
90 Ga0466965_0015365 3300044683 Bacteria 3636
91 Ga0466963_0004581 3300044694 Bacteria 8045
92 Ga0466963_0012036 3300044694 Bacteria 5284
93 Ga0466970_0000004 3300044765 Bacteria 108620
94 Ga0466970_0001554 3300044765 Bacteria 11065
95 Ga0466970_0012655 3300044765 Bacteria 4316
96 Ga0466957_0022762 3300044842 Bacteria 3699
97 Ga0466960_0002001 3300044901 Bacteria 7562
98 Ga0466959_0005863 3300045049 Bacteria 8458
99 Ga0466958_0008331 3300045836 Bacteria 5745
100 Ga0466958_0011153 3300045836 Bacteria 5056
101 Ga0466958_0012694 3300045836 Bacteria 4777
102 Ga0495603_0008246 3300046455 Bacteria 6296
103 Ga0495590_0001547 3300046457 Bacteria 9886
104 Ga0495653_0028903 3300046463 Bacteria 4431
105 Ga0495650_0002708 3300046471 Bacteria 13740
106 Ga0495582_0022866 3300046473 Bacteria 3419
107 Ga0495608_0012818 3300046511 Bacteria 5818
108 Ga0495618_0021746 3300046514 Bacteria 3955
109 Ga0495630_0034610 3300046517 Bacteria 3772
110 Ga0495665_0003440 3300046531 Bacteria 8599
111 Ga0495640_0013465 3300046533 Bacteria 6214
112 Ga0495587_0021864 3300046536 Bacteria 3945
113 Ga0495657_0008070 3300046675 Bacteria 8071
114 Ga0495658_0012972 3300046683 Bacteria 4233
115 Ga0495624_0003051 3300046690 Bacteria 12538
116 Ga0495600_0020199 3300046809 Bacteria 4260
117 Ga0495581_0006687 3300047315 Bacteria 6681
118 Ga0495672_0010223 3300047320 Bacteria 6705
119 Ga0495614_0010568 3300048089 Bacteria 4071
120 Ga0496100_0027017 3300048903 Bacteria 3524
121 Ga0496101_0033295 3300048904 Bacteria 3633
122 Ga0496102_0020720 3300048905 Bacteria 5810
123 Ga0496104_0051805 3300048907 Bacteria 3875
124 Ga0496105_0005230 3300048908 Bacteria 9836
125 Ga0496108_0000011 3300048911 Bacteria 263294
126 Ga0496108_0005306 3300048911 Bacteria 10405
127 Ga0496109_0013755 3300048912 Bacteria 7031
128 Ga0496109_0039333 3300048912 Bacteria 4280
129 Ga0496109_0047347 3300048912 Bacteria 3909
130 Ga0496110_0005759 3300048913 Bacteria 9734
131 Ga0496111_0000413 3300048914 Bacteria 21479
132 Ga0496113_0001523 3300048916 Bacteria 12982
133 Ga0496114_0031415 3300048917 Bacteria 4370
134 Ga0496115_0004865 3300048918 Bacteria 9746
135 Ga0496116_0021767 3300048919 Bacteria 4825
136 Ga0496117_0000128 3300048920 Bacteria 166039
137 Ga0496117_0000471 3300048920 Bacteria 66939
138 Ga0496117_0001654 3300048920 Bacteria 31298
139 Ga0496117_0005430 3300048920 Bacteria 13394
140 Ga0496117_0008393 3300048920 Bacteria 9820
141 Ga0496118_0000089 3300048921 Bacteria 175942
142 Ga0496118_0003676 3300048921 Bacteria 19031
143 Ga0496118_0005054 3300048921 Bacteria 15209
144 Ga0496118_0005105 3300048921 Bacteria 15090
145 Ga0496119_0000751 3300048922 Bacteria 43594
146 Ga0496119_0001505 3300048922 Bacteria 27872
147 Ga0496119_0002431 3300048922 Bacteria 20449
148 Ga0496119_0006356 3300048922 Bacteria 10983
149 Ga0496119_0012511 3300048922 Bacteria 6883
150 Ga0496119_0014233 3300048922 Bacteria 6247
151 Ga0496120_0000566 3300048923 Bacteria 56431
152 Ga0496120_0000593 3300048923 Bacteria 54794
153 Ga0496120_0002142 3300048923 Bacteria 21065
154 Ga0496120_0005796 3300048923 Bacteria 9686
155 Ga0496121_0000040 3300048924 Bacteria 348494
156 Ga0496122_0000031 3300048925 Bacteria 329726
157 Ga0496122_0000120 3300048925 Bacteria 182539
158 Ga0496122_0001347 3300048925 Bacteria 40068
159 Ga0496122_0001923 3300048925 Bacteria 31387
160 Ga0496122_0004276 3300048925 Bacteria 17906
161 Ga0496123_0000013 3300048926 Bacteria 439694
162 Ga0496123_0000051 3300048926 Bacteria 237095
163 Ga0496123_0002262 3300048926 Bacteria 24261
164 Ga0496123_0002670 3300048926 Bacteria 21505
165 Ga0496124_0000037 3300048927 Bacteria 317430
166 Ga0496124_0009978 3300048927 Bacteria 9699
167 Ga0496124_0020920 3300048927 Bacteria 6036
168 Ga0496125_0000097 3300048928 Bacteria 204607
169 Ga0496125_0002360 3300048928 Bacteria 24729
170 Ga0496125_0005838 3300048928 Bacteria 13518
171 Ga0496125_0010821 3300048928 Bacteria 9186
172 Ga0496125_0016533 3300048928 Bacteria 7080
173 Ga0496126_0001388 3300048929 Bacteria 38310
174 Ga0501031_0017769 3300049568 Bacteria 4625
175 Ga0501031_0021018 3300049568 Bacteria 4257
176 Ga0501032_0014811 3300049569 Bacteria 5518
177 Ga0501033_0032273 3300049570 Bacteria 3933
178 Ga0501034_0003937 3300049571 Bacteria 16693
179 Ga0501034_0015379 3300049571 Bacteria 7864
180 Ga0501036_0007770 3300049572 Bacteria 8768
181 Ga0501036_0052936 3300049572 Bacteria 3437
182 Ga0501036_0083015 3300049572 Bacteria 2708
183 Ga0501037_0010206 3300049573 Bacteria 6890
184 Ga0501037_0011757 3300049573 Bacteria 6446
185 Ga0501037_0027833 3300049573 Bacteria 4177
186 Ga0501038_0003536 3300049574 Bacteria 14541
187 Ga0501038_0015112 3300049574 Bacteria 7025
188 Ga0501038_0041453 3300049574 Bacteria 4015
189 Ga0501039_0018063 3300049575 Bacteria 5411
190 Ga0501039_0029504 3300049575 Bacteria 4224
191 Ga0501040_0007776 3300049576 Bacteria 6940
192 Ga0501041_0005046 3300049577 Bacteria 7687
193 Ga0501042_0000599 3300049578 Bacteria 19202
194 Ga0501042_0001506 3300049578 Bacteria 13761
195 Ga0501042_0005537 3300049578 Bacteria 8137
196 Ga0501043_0008652 3300049579 Bacteria 8019
197 Ga0501043_0014284 3300049579 Bacteria 6213
198 Ga0501043_0024317 3300049579 Bacteria 4754
199 Ga0501047_0008611 3300049581 Bacteria 9635
200 Ga0501047_0023961 3300049581 Bacteria 5861
201 Ga0501067_0000039 3300049583 Bacteria 81137
202 Ga0501067_0002142 3300049583 Bacteria 10871
203 Ga0501068_0000002 3300049584 Bacteria 98998
204 Ga0501069_0013964 3300049585 Bacteria 4290
205 Ga0501070_0000565 3300049586 Bacteria 33728
206 Ga0501070_0000673 3300049586 Bacteria 31551
207 Ga0501070_0002886 3300049586 Bacteria 14978
208 Ga0501070_0005224 3300049586 Bacteria 11068
209 Ga0501071_0002205 3300049587 Bacteria 11724
210 Ga0501071_0003430 3300049587 Bacteria 9902
211 Ga0501072_0000501 3300049588 Bacteria 28164
212 Ga0501072_0001957 3300049588 Bacteria 15337
213 Ga0501072_0005376 3300049588 Bacteria 9750
214 Ga0501073_0000029 3300049589 Bacteria 117147
215 Ga0501074_0023038 3300049590 Bacteria 4529
216 Ga0501075_0000413 3300049591 Bacteria 24963
217 Ga0501075_0010527 3300049591 Bacteria 6501
218 Ga0501075_0040325 3300049591 Bacteria 3497
219 Ga0501076_0001199 3300049592 Bacteria 17196
220 Ga0501076_0019907 3300049592 Bacteria 5133
221 Ga0501077_0004682 3300049593 Bacteria 8314
222 Ga0501077_0008592 3300049593 Bacteria 6332
223 Ga0501079_0004330 3300049741 Bacteria 10532
224 Ga0501079_0021597 3300049741 Bacteria 4924
225 Ga0501080_0001097 3300049742 Bacteria 22311
226 Ga0501080_0018659 3300049742 Bacteria 6419
227 Ga0501081_0002327 3300049743 Bacteria 11963
228 Ga0501083_0000169 3300049744 Bacteria 42763
229 Ga0501083_0029791 3300049744 Bacteria 3751
230 Ga0501035_0001966 3300049822 Bacteria 20571
231 Ga0501035_0004183 3300049822 Bacteria 13715
232 Ga0501035_0022847 3300049822 Bacteria 5743
233 Ga0501044_0061847 3300049823 Bacteria 3829
234 Ga0501044_0073451 3300049823 Bacteria 3476
235 nmdc:mga00v17_14539_c1 3300050491 Bacteria 4396
236 nmdc:mga00v17_24436_c1 3300050491 Bacteria 3506
237 nmdc:mga00v17_8550_c1 3300050491 Bacteria 5509
238 nmdc:mga05p37_4015_c1 3300050507 Bacteria 17209
239 nmdc:mga09592_29919_c1 3300050508 Bacteria 4530
240 nmdc:mga06r32_9364_c1 3300050510 Bacteria 8833
241 nmdc:mga0n895_13542_c1 3300050512 Bacteria 7366
242 nmdc:mga0rr50_35185_c1 3300050513 Bacteria 3595
243 nmdc:mga0sz30_5184_c1 3300050516 Bacteria 4772
244 Ga0500635_0000012 3300053080 Bacteria 138781
245 Ga0500643_000425 3300053087 Bacteria 32082
246 Ga0500651_0002023 3300053093 Bacteria 10523
247 Ga0500556_0000001 3300053104 Bacteria 1135060
248 Ga0500556_0000215 3300053104 Bacteria 47104
249 Ga0500593_002532 3300053117 Bacteria 6726
250 Ga0500559_0000295 3300053136 Bacteria 38451
251 Ga0500559_0000359 3300053136 Bacteria 33891
252 Ga0500559_0000709 3300053136 Bacteria 21894
253 Ga0500568_0000006 3300053139 Bacteria 522235
254 Ga0500568_0000014 3300053139 Bacteria 223550
255 Ga0500568_0000962 3300053139 Bacteria 19809
256 Ga0500568_0009632 3300053139 Bacteria 4577
257 Ga0500573_0000017 3300053140 Bacteria 181426
258 Ga0500573_0014259 3300053140 Bacteria 4493
259 Ga0500616_0000021 3300053153 Bacteria 484527
260 Ga0500616_0000125 3300053153 Bacteria 135146
261 Ga0501084_0000803 3300054114 Bacteria 24054
262 Ga0501084_0017487 3300054114 Bacteria 5961
263 Ga0501084_0051262 3300054114 Bacteria 3454
264 Ga0501082_0000962 3300060353 Bacteria 25427
265 Ga0530510_0007541 3300061734 Bacteria 7578
266 Ga0530510_0025472 3300061734 Bacteria 4230

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049575 Ga0501039_0018063 Ga0501039_0018063_27_2447 793
2 3300049573 Ga0501037_0027833 Ga0501037_0027833_13_2451 809
3 3300049568 Ga0501031_0021018 Ga0501031_0021018_61_2559 816
4 iso_pu_bacteria 8046352972 8046356450 817
5 3300050491 nmdc:mga00v17_8550_c1 nmdc:mga00v17_8550_c1_3031_5499 819
6 3300049572 Ga0501036_0083015 Ga0501036_0083015_172_2694 830
7 3300049591 Ga0501075_0040325 Ga0501075_0040325_14_2671 882
8 3300053140 Ga0500573_0000017 Ga0500573_0000017_68591_71359 920
9 iso_pu_bacteria 2721755702 2723642019 920
10 3300048929 Ga0496126_0001388 Ga0496126_0001388_5433_8276 921
11 3300006846 Ga0075430_100020991 Ga0075430_1000209911 924
12 3300050507 nmdc:mga05p37_4015_c1 nmdc:mga05p37_4015_c1_12996_16007 925
13 3300050508 nmdc:mga09592_29919_c1 nmdc:mga09592_29919_c1_30_3041 925
14 3300048921 Ga0496118_0005105 Ga0496118_0005105_13_2796 927
15 3300049578 Ga0501042_0001506 Ga0501042_0001506_6405_9224 928
16 3300049587 Ga0501071_0002205 Ga0501071_0002205_3161_5980 928
17 3300049588 Ga0501072_0001957 Ga0501072_0001957_2186_5005 928
18 3300049591 Ga0501075_0000413 Ga0501075_0000413_5826_8645 928
19 3300049592 Ga0501076_0001199 Ga0501076_0001199_10311_13130 928
20 3300049593 Ga0501077_0008592 Ga0501077_0008592_738_3557 928
21 3300049741 Ga0501079_0004330 Ga0501079_0004330_2044_4863 928
22 3300054114 Ga0501084_0000803 Ga0501084_0000803_18211_21030 928
23 3300006844 Ga0075428_100000928 Ga0075428_10000092814 929
24 3300009147 Ga0114129_10001569 Ga0114129_1000156917 929
25 3300050510 nmdc:mga06r32_9364_c1 nmdc:mga06r32_9364_c1_127_3138 930
26 3300053140 Ga0500573_0014259 Ga0500573_0014259_313_3162 931
27 3300048925 Ga0496122_0001923 Ga0496122_0001923_23768_26650 935
28 iso_pu_bacteria 2643221549 2643767783 935
29 iso_pu_bacteria 2643221619 2644111158 935
30 iso_pu_bacteria 2808606372 2808901997 935
31 3300014325 Ga0163163_10010338 Ga0163163_100103382 936
32 3300049568 Ga0501031_0017769 Ga0501031_0017769_1775_4597 936
33 3300049572 Ga0501036_0007770 Ga0501036_0007770_2834_5656 936
34 3300049572 Ga0501036_0052936 Ga0501036_0052936_580_3402 936
35 3300049574 Ga0501038_0015112 Ga0501038_0015112_1777_4599 936
36 3300049574 Ga0501038_0041453 Ga0501038_0041453_662_3484 936
37 3300049575 Ga0501039_0029504 Ga0501039_0029504_1122_3944 936
38 3300049576 Ga0501040_0007776 Ga0501040_0007776_2910_5732 936
39 3300049577 Ga0501041_0005046 Ga0501041_0005046_1498_4320 936
40 3300049578 Ga0501042_0005537 Ga0501042_0005537_2486_5308 936
41 3300049579 Ga0501043_0024317 Ga0501043_0024317_1855_4677 936
42 3300049585 Ga0501069_0013964 Ga0501069_0013964_358_3180 936
43 3300049587 Ga0501071_0003430 Ga0501071_0003430_2067_4889 936
44 3300049588 Ga0501072_0000501 Ga0501072_0000501_157_2979 936
45 3300049588 Ga0501072_0005376 Ga0501072_0005376_3322_6144 936
46 3300049591 Ga0501075_0010527 Ga0501075_0010527_1264_4086 936
47 3300049592 Ga0501076_0019907 Ga0501076_0019907_2299_5121 936
48 3300049593 Ga0501077_0004682 Ga0501077_0004682_4479_7301 936
49 3300049741 Ga0501079_0021597 Ga0501079_0021597_30_2852 936
50 3300049742 Ga0501080_0018659 Ga0501080_0018659_2345_5167 936
51 3300049743 Ga0501081_0002327 Ga0501081_0002327_8988_11810 936
52 3300049822 Ga0501035_0022847 Ga0501035_0022847_1677_4499 936
53 3300053093 Ga0500651_0002023 Ga0500651_0002023_3655_6480 936
54 3300054114 Ga0501084_0017487 Ga0501084_0017487_1597_4419 936
55 3300060353 Ga0501082_0000962 Ga0501082_0000962_2213_5035 936
56 3300061734 Ga0530510_0007541 Ga0530510_0007541_2418_5240 936
57 3300054114 Ga0501084_0051262 Ga0501084_0051262_122_2998 937
58 3300002772 JGI25164J39214_1000773 JGI25164J39214_10007733 938
59 3300003214 JGI25165J46597_1000330 JGI25165J46597_100033047 938
60 3300025231 Ga0207427_100052 Ga0207427_10005267 938
61 3300025233 Ga0209437_100484 Ga0209437_1004841 938
62 3300025261 Ga0209233_1000001 Ga0209233_10000012015 938
63 3300048903 Ga0496100_0027017 Ga0496100_0027017_309_3143 938
64 3300048917 Ga0496114_0031415 Ga0496114_0031415_1116_3950 938
65 3300053136 Ga0500559_0000295 Ga0500559_0000295_3230_6112 938
66 3300053136 Ga0500559_0000359 Ga0500559_0000359_4279_7152 938
67 iso_pu_bacteria 2643221649 2644279744 938
68 3300048911 Ga0496108_0000011 Ga0496108_0000011_10777_13785 939
69 3300013296 Ga0157374_10035658 Ga0157374_100356583 940
70 3300025927 Ga0207687_10040295 Ga0207687_100402951 940
71 3300048904 Ga0496101_0033295 Ga0496101_0033295_569_3412 940
72 3300048912 Ga0496109_0047347 Ga0496109_0047347_935_3778 940
73 3300048914 Ga0496111_0000413 Ga0496111_0000413_2373_5216 940
74 3300048916 Ga0496113_0001523 Ga0496113_0001523_8372_11215 940
75 3300005439 Ga0070711_100006899 Ga0070711_1000068993 941
76 3300005535 Ga0070684_100039425 Ga0070684_1000394252 941
77 3300006175 Ga0070712_100029134 Ga0070712_1000291342 941
78 3300006871 Ga0075434_100017274 Ga0075434_1000172746 941
79 3300025913 Ga0207695_10028891 Ga0207695_100288916 941
80 3300025916 Ga0207663_10001530 Ga0207663_100015304 941
81 3300025917 Ga0207660_10040745 Ga0207660_100407452 941
82 3300028800 Ga0265338_10011690 Ga0265338_100116905 941
83 3300031251 Ga0265327_10003007 Ga0265327_100030075 941
84 3300036401 Ga0373937_0077089 Ga0373937_0077089_66_2915 941
85 3300044694 Ga0466963_0004581 Ga0466963_0004581_5152_7998 941
86 3300044694 Ga0466963_0012036 Ga0466963_0012036_166_3012 941
87 3300045836 Ga0466958_0008331 Ga0466958_0008331_2352_5198 941
88 3300045836 Ga0466958_0011153 Ga0466958_0011153_636_3482 941
89 3300048911 Ga0496108_0005306 Ga0496108_0005306_5031_7877 941
90 3300048912 Ga0496109_0013755 Ga0496109_0013755_1579_4425 941
91 3300048912 Ga0496109_0039333 Ga0496109_0039333_109_2967 941
92 3300048913 Ga0496110_0005759 Ga0496110_0005759_1875_4721 941
93 3300048918 Ga0496115_0004865 Ga0496115_0004865_1024_3870 941
94 3300048927 Ga0496124_0020920 Ga0496124_0020920_1809_4634 941
95 3300048928 Ga0496125_0005838 Ga0496125_0005838_7803_10628 941
96 3300049583 Ga0501067_0000039 Ga0501067_0000039_52176_55034 941
97 3300049583 Ga0501067_0002142 Ga0501067_0002142_4517_7363 941
98 3300049584 Ga0501068_0000002 Ga0501068_0000002_26104_28962 941
99 3300050512 nmdc:mga0n895_13542_c1 nmdc:mga0n895_13542_c1_1007_3853 941
100 3300061734 Ga0530510_0025472 Ga0530510_0025472_320_3178 941
101 3300049579 Ga0501043_0014284 Ga0501043_0014284_48_2939 942
102 3300047320 Ga0495672_0010223 Ga0495672_0010223_253_3168 943
103 3300048907 Ga0496104_0051805 Ga0496104_0051805_273_3122 944
104 3300048908 Ga0496105_0005230 Ga0496105_0005230_6741_9590 944
105 3300048928 Ga0496125_0016533 Ga0496125_0016533_3193_6027 944
106 3300049573 Ga0501037_0011757 Ga0501037_0011757_3451_6336 945
107 3300049574 Ga0501038_0003536 Ga0501038_0003536_6301_9186 945
108 3300049581 Ga0501047_0023961 Ga0501047_0023961_2866_5751 945
109 3300005339 Ga0070660_100004698 Ga0070660_1000046988 947
110 3300005547 Ga0070693_100013812 Ga0070693_1000138123 947
111 3300005563 Ga0068855_100040938 Ga0068855_1000409382 947
112 3300006871 Ga0075434_100007623 Ga0075434_1000076233 947
113 3300007076 Ga0075435_100045672 Ga0075435_1000456722 947
114 3300011119 Ga0105246_10014967 Ga0105246_100149675 947
115 3300025901 Ga0207688_10005589 Ga0207688_100055895 947
116 3300025919 Ga0207657_10009599 Ga0207657_100095993 947
117 3300025927 Ga0207687_10001527 Ga0207687_100015273 947
118 3300025949 Ga0207667_10039186 Ga0207667_100391863 947
119 3300026078 Ga0207702_10024136 Ga0207702_100241362 947
120 3300037068 Ga0373925_0004339 Ga0373925_0004339_1430_4345 947
121 3300046455 Ga0495603_0008246 Ga0495603_0008246_963_3878 947
122 3300046463 Ga0495653_0028903 Ga0495653_0028903_331_3246 947
123 3300046473 Ga0495582_0022866 Ga0495582_0022866_412_3327 947
124 3300046511 Ga0495608_0012818 Ga0495608_0012818_1477_4392 947
125 3300046514 Ga0495618_0021746 Ga0495618_0021746_713_3628 947
126 3300046517 Ga0495630_0034610 Ga0495630_0034610_343_3258 947
127 3300046531 Ga0495665_0003440 Ga0495665_0003440_594_3509 947
128 3300046533 Ga0495640_0013465 Ga0495640_0013465_1562_4477 947
129 3300046536 Ga0495587_0021864 Ga0495587_0021864_362_3277 947
130 3300046675 Ga0495657_0008070 Ga0495657_0008070_4847_7762 947
131 3300046683 Ga0495658_0012972 Ga0495658_0012972_841_3756 947
132 3300046690 Ga0495624_0003051 Ga0495624_0003051_4736_7651 947
133 3300046809 Ga0495600_0020199 Ga0495600_0020199_1186_4101 947
134 3300047315 Ga0495581_0006687 Ga0495581_0006687_53_2968 947
135 3300048089 Ga0495614_0010568 Ga0495614_0010568_568_3483 947
136 3300050513 nmdc:mga0rr50_35185_c1 nmdc:mga0rr50_35185_c1_157_3072 947
137 iso_pu_bacteria 2919523602 2919524595 947
138 3300048925 Ga0496122_0001347 Ga0496122_0001347_3163_6045 948
139 3300048926 Ga0496123_0002670 Ga0496123_0002670_991_3873 948
140 iso_pu_bacteria 2862993130 2862996292 948
141 3300025225 Ga0209566_100050 Ga0209566_100050118 949
142 3300025226 Ga0209674_100001 Ga0209674_100001870 949
143 3300025230 Ga0209563_100001 Ga0209563_100001870 949
144 3300025253 Ga0209677_100001 Ga0209677_100001870 949
145 3300037312 Ga0395899_0035889 Ga0395899_0035889_627_3494 949
146 3300044683 Ga0466965_0015365 Ga0466965_0015365_531_3398 949
147 3300044765 Ga0466970_0012655 Ga0466970_0012655_243_3110 949
148 iso_pu_bacteria 2643221616 2644096123 949
149 3300049590 Ga0501074_0023038 Ga0501074_0023038_370_3261 950
150 iso_pu_bacteria 2585428094 2587862846 950
151 iso_pu_bacteria 2738543005 2739203809 950
152 iso_pu_bacteria 2852643534 2852645449 950
153 3300045836 Ga0466958_0012694 Ga0466958_0012694_1837_4734 951
154 3300053080 Ga0500635_0000012 Ga0500635_0000012_29531_32416 951
155 iso_pu_bacteria 2585428157 2588108284 951
156 iso_pu_bacteria 2857733635 2857735651 951
157 iso_pu_bacteria 2870622029 2870623535 951
158 iso_pu_bacteria 2939657138 2939657965 951
159 3300013105 Ga0157369_10000408 Ga0157369_1000040831 952
160 3300049570 Ga0501033_0032273 Ga0501033_0032273_524_3415 952
161 3300049823 Ga0501044_0073451 Ga0501044_0073451_209_3100 952
162 iso_pu_bacteria 2966921586 2966922773 952
163 3300006186 Ga0075369_10001250 Ga0075369_100012504 953
164 3300031649 Ga0307514_10003710 Ga0307514_100037105 953
165 3300037418 Ga0395900_0078338 Ga0395900_0078338_431_3307 953
166 3300044842 Ga0466957_0022762 Ga0466957_0022762_455_3409 953
167 3300044901 Ga0466960_0002001 Ga0466960_0002001_1493_4393 953
168 3300050516 nmdc:mga0sz30_5184_c1 nmdc:mga0sz30_5184_c1_988_3870 953
169 iso_pu_bacteria 2884763398 2884765489 953
170 iso_pu_bacteria 2919443155 2919446228 953
171 iso_pu_bacteria 2935409751 2935411369 953
172 iso_pu_bacteria 2939660829 2939661038 953
173 iso_pu_bacteria 2974324384 2974326848 953
174 3300050491 nmdc:mga00v17_24436_c1 nmdc:mga00v17_24436_c1_164_3121 954
175 iso_pu_bacteria 2643221546 2643752737 954
176 iso_pu_bacteria 2643221566 2643848118 954
177 iso_pu_bacteria 2816332119 2816426225 954
178 iso_pu_bacteria 2857729791 2857732596 954
179 iso_pu_bacteria 2928121344 2928122938 954
180 iso_pu_bacteria 2964326757 2964329699 954
181 3300003760 Ga0055527_1000001 Ga0055527_1000001333 955
182 3300003763 Ga0055529_1000018 Ga0055529_1000018163 955
183 3300025228 Ga0209672_100006 Ga0209672_100006643 955
184 3300025229 Ga0209147_100484 Ga0209147_1004843 955
185 3300025254 Ga0209148_1000015 Ga0209148_1000015487 955
186 3300025272 Ga0209455_1000013 Ga0209455_1000013487 955
187 3300049586 Ga0501070_0000565 Ga0501070_0000565_23749_26691 955
188 3300053087 Ga0500643_000425 Ga0500643_000425_25414_28359 955
189 3300053104 Ga0500556_0000001 Ga0500556_0000001_235990_238929 955
190 3300053139 Ga0500568_0000006 Ga0500568_0000006_496293_499232 955
191 iso_pu_bacteria 2643221575 2643885163 955
192 iso_pu_bacteria 8002811521 8002812596 955
193 3300002067 JGI24735J21928_10001503 JGI24735J21928_100015032 956
194 3300003752 Ga0055539_1000008 Ga0055539_1000008201 956
195 3300003756 Ga0055533_1000001 Ga0055533_1000001870 956
196 3300003759 Ga0055525_1000569 Ga0055525_10005696 956
197 3300003841 Ga0055541_1002703 Ga0055541_10027031 956
198 3300025230 Ga0209563_100524 Ga0209563_1005242 956
199 3300025253 Ga0209677_100838 Ga0209677_1008389 956
200 3300025272 Ga0209455_1000903 Ga0209455_10009036 956
201 3300044765 Ga0466970_0001554 Ga0466970_0001554_1580_4522 956
202 3300045049 Ga0466959_0005863 Ga0466959_0005863_3503_6445 956
203 3300048920 Ga0496117_0000128 Ga0496117_0000128_154467_157361 956
204 3300049571 Ga0501034_0015379 Ga0501034_0015379_3015_5936 956
205 3300049578 Ga0501042_0000599 Ga0501042_0000599_12480_15374 956
206 3300049744 Ga0501083_0000169 Ga0501083_0000169_25294_28188 956
207 3300049822 Ga0501035_0004183 Ga0501035_0004183_7972_10893 956
208 3300049823 Ga0501044_0061847 Ga0501044_0061847_846_3767 956
209 3300053153 Ga0500616_0000021 Ga0500616_0000021_289191_292133 956
210 iso_pu_bacteria 2643221572 2643875147 956
211 iso_pu_bacteria 2643221635 2644199293 956
212 iso_pu_bacteria 2643221669 2644382203 956
213 iso_pu_bacteria 2844841374 2844842536 956
214 iso_pu_bacteria 2857737099 2857737374 956
215 iso_pu_bacteria 2919055335 2919058221 956
216 iso_pu_bacteria 2928153084 2928156482 956
217 iso_pu_bacteria 2966924647 2966924834 956
218 iso_pu_bacteria 8057345674 8057348708 956
219 3300050491 nmdc:mga00v17_14539_c1 nmdc:mga00v17_14539_c1_1378_4260 957
220 3300053104 Ga0500556_0000215 Ga0500556_0000215_9047_11929 957
221 3300053117 Ga0500593_002532 Ga0500593_002532_2573_5455 957
222 3300053136 Ga0500559_0000709 Ga0500559_0000709_5282_8164 957
223 iso_pu_bacteria 2643221597 2643995983 957
224 iso_pu_bacteria 2773857759 2774384693 957
225 iso_pu_bacteria 2808606447 2809227192 957
226 iso_pu_bacteria 2821268502 2821269787 957
227 iso_pu_bacteria 2852632344 2852633427 957
228 iso_pu_bacteria 2857720070 2857721674 957
229 iso_pu_bacteria 2928090899 2928092321 957
230 iso_pu_bacteria 2977251589 2977253726 957
231 iso_pu_bacteria 2984580707 2984580903 957
232 iso_pu_bacteria 2995726249 2995728082 957
233 iso_pu_bacteria 8055037949 8055038537 957
234 3300013105 Ga0157369_10007844 Ga0157369_100078442 958
235 3300048921 Ga0496118_0005054 Ga0496118_0005054_2215_5100 958
236 3300048925 Ga0496122_0000120 Ga0496122_0000120_60943_63828 958
237 3300048926 Ga0496123_0000051 Ga0496123_0000051_90838_93723 958
238 3300049589 Ga0501073_0000029 Ga0501073_0000029_78565_81453 958
239 iso_pu_bacteria 2643221542 2643733399 958
240 iso_pu_bacteria 2643221553 2643786119 958
241 iso_pu_bacteria 2643221630 2644169973 958
242 iso_pu_bacteria 2643221632 2644183525 958
243 iso_pu_bacteria 2643221724 2644680511 958
244 iso_pu_bacteria 2728369380 2730229970 958
245 iso_pu_bacteria 2747842429 2747953058 958
246 iso_pu_bacteria 2852646457 2852648669 958
247 iso_pu_bacteria 2852663356 2852666961 958
248 iso_pu_bacteria 2857723135 2857724178 958
249 iso_pu_bacteria 2870628048 2870630120 958
250 iso_pu_bacteria 2895660088 2895661274 958
251 iso_pu_bacteria 2945968032 2945968096 958
252 iso_pu_bacteria 2946041624 2946044594 958
253 iso_pu_bacteria 2946080515 2946080645 958
254 iso_pu_bacteria 8004182704 8004184881 958
255 iso_pu_bacteria 8055034563 8055035909 958
256 iso_pu_bacteria 2844852863 2844855481 959
257 iso_pu_bacteria 8056037122 8056037529 959
258 3300005327 Ga0070658_10027919 Ga0070658_100279192 960
259 3300005563 Ga0068855_100001400 Ga0068855_1000014006 960
260 3300005577 Ga0068857_100007435 Ga0068857_1000074352 960
261 3300005834 Ga0068851_10000061 Ga0068851_1000006154 960
262 3300009093 Ga0105240_10002502 Ga0105240_1000250222 960
263 3300009098 Ga0105245_10005677 Ga0105245_100056777 960
264 3300009174 Ga0105241_10000229 Ga0105241_1000022934 960
265 3300009545 Ga0105237_10000827 Ga0105237_1000082733 960
266 3300009551 Ga0105238_10000640 Ga0105238_100006406 960
267 3300025254 Ga0209148_1000498 Ga0209148_100049819 960
268 3300025321 Ga0207656_10000012 Ga0207656_10000012131 960
269 3300025911 Ga0207654_10000003 Ga0207654_1000000396 960
270 3300025913 Ga0207695_10002929 Ga0207695_100029295 960
271 3300025914 Ga0207671_10000002 Ga0207671_10000002239 960
272 3300025914 Ga0207671_10030654 Ga0207671_100306542 960
273 3300025924 Ga0207694_10000061 Ga0207694_1000006160 960
274 3300025927 Ga0207687_10023740 Ga0207687_100237402 960
275 3300025949 Ga0207667_10002096 Ga0207667_1000209618 960
276 3300025949 Ga0207667_10002706 Ga0207667_100027066 960
277 3300026035 Ga0207703_10000044 Ga0207703_10000044144 960
278 3300026116 Ga0207674_10003026 Ga0207674_1000302611 960
279 3300037418 Ga0395900_0005064 Ga0395900_0005064_8130_11120 960
280 3300037466 Ga0395898_0000131 Ga0395898_0000131_115883_118873 960
281 3300044683 Ga0466965_0000005 Ga0466965_0000005_140777_143680 960
282 3300046457 Ga0495590_0001547 Ga0495590_0001547_5569_8466 960
283 3300046471 Ga0495650_0002708 Ga0495650_0002708_2302_5208 960
284 3300048922 Ga0496119_0012511 Ga0496119_0012511_180_3086 960
285 3300048923 Ga0496120_0000566 Ga0496120_0000566_41086_43992 960
286 3300049569 Ga0501032_0014811 Ga0501032_0014811_29_2947 960
287 3300049571 Ga0501034_0003937 Ga0501034_0003937_8735_11632 960
288 3300049579 Ga0501043_0008652 Ga0501043_0008652_639_3536 960
289 3300049586 Ga0501070_0000673 Ga0501070_0000673_8877_11885 960
290 3300049586 Ga0501070_0005224 Ga0501070_0005224_6558_9455 960
291 3300049742 Ga0501080_0001097 Ga0501080_0001097_9048_11945 960
292 3300049744 Ga0501083_0029791 Ga0501083_0029791_429_3326 960
293 3300053139 Ga0500568_0000014 Ga0500568_0000014_51888_54785 960
294 3300053139 Ga0500568_0000962 Ga0500568_0000962_12370_15273 960
295 3300053139 Ga0500568_0009632 Ga0500568_0009632_1349_4255 960
296 3300053153 Ga0500616_0000125 Ga0500616_0000125_43013_45910 960
297 iso_pu_bacteria 2808606368 2808885432 960
298 iso_pu_bacteria 2897561785 2897563400 960
299 iso_pu_bacteria 2919395869 2919398334 960
300 iso_pu_bacteria 2946033335 2946033499 960
301 3300006038 Ga0075365_10002020 Ga0075365_100020204 961
302 3300025904 Ga0207647_10020010 Ga0207647_100200102 961
303 3300048919 Ga0496116_0021767 Ga0496116_0021767_1845_4745 961
304 3300048921 Ga0496118_0003676 Ga0496118_0003676_8319_11219 961
305 3300048922 Ga0496119_0006356 Ga0496119_0006356_314_3214 961
306 3300048923 Ga0496120_0005796 Ga0496120_0005796_2977_5877 961
307 3300048925 Ga0496122_0000031 Ga0496122_0000031_7787_10687 961
308 3300048926 Ga0496123_0000013 Ga0496123_0000013_7797_10697 961
309 3300048928 Ga0496125_0010821 Ga0496125_0010821_1849_4749 961
310 3300002738 JGI25154J39366_1001606 JGI25154J39366_10016062 962
311 3300025246 Ga0209646_1000071 Ga0209646_1000071183 962
312 3300031901 Ga0307406_10002452 Ga0307406_100024527 962
313 3300048920 Ga0496117_0005430 Ga0496117_0005430_6761_9649 962
314 iso_pu_bacteria 2757320536 2758226353 962
315 iso_pu_bacteria 2808606306 2808631413 962
316 iso_pu_bacteria 2811994872 2812322882 962
317 iso_pu_bacteria 8016254467 8016257788 962
318 3300048905 Ga0496102_0020720 Ga0496102_0020720_963_3989 963
319 3300048920 Ga0496117_0001654 Ga0496117_0001654_27538_30576 963
320 3300048920 Ga0496117_0008393 Ga0496117_0008393_5745_8648 963
321 3300048921 Ga0496118_0000089 Ga0496118_0000089_164403_167441 963
322 3300048927 Ga0496124_0000037 Ga0496124_0000037_254188_257217 963
323 iso_pu_bacteria 2751185788 2753302168 963
324 iso_pu_bacteria 2833709550 2833710710 963
325 iso_pu_bacteria 2904430863 2904432674 963
326 iso_pu_bacteria 2904501621 2904503121 963
327 iso_pu_bacteria 2908674828 2908675702 963
328 iso_pu_bacteria 2909074476 2909074754 963
329 iso_pu_bacteria 2919039151 2919040786 963
330 iso_pu_bacteria 2919042368 2919043852 963
331 iso_pu_bacteria 2928104781 2928105098 963
332 iso_pu_bacteria 2928500415 2928500686 963
333 iso_pu_bacteria 2984551494 2984554307 963
334 iso_pu_bacteria 8045830549 8045830935 963
335 3300048928 Ga0496125_0000097 Ga0496125_0000097_150946_153840 964
336 3300049573 Ga0501037_0010206 Ga0501037_0010206_2257_5184 964
337 3300049581 Ga0501047_0008611 Ga0501047_0008611_6227_9154 964
338 3300049822 Ga0501035_0001966 Ga0501035_0001966_1211_4138 964
339 3300025728 Ga0207655_1007378 Ga0207655_10073784 965
340 iso_pu_bacteria 2977264416 2977266358 965
341 iso_pu_bacteria 8004212874 8004214082 965
342 3300048920 Ga0496117_0000471 Ga0496117_0000471_51253_54192 966
343 3300048922 Ga0496119_0000751 Ga0496119_0000751_37983_40916 966
344 3300048922 Ga0496119_0002431 Ga0496119_0002431_12790_15729 966
345 3300048922 Ga0496119_0014233 Ga0496119_0014233_27_2966 966
346 3300048923 Ga0496120_0000593 Ga0496120_0000593_39383_42322 966
347 3300048923 Ga0496120_0002142 Ga0496120_0002142_12407_15346 966
348 3300048925 Ga0496122_0004276 Ga0496122_0004276_9865_12804 966
349 3300048926 Ga0496123_0002262 Ga0496123_0002262_12296_15235 966
350 3300048927 Ga0496124_0009978 Ga0496124_0009978_2408_5347 966
351 3300048928 Ga0496125_0002360 Ga0496125_0002360_3703_6642 966
352 iso_pu_bacteria 2773857758 2774380751 966
353 iso_pu_bacteria 2773857763 2774399782 966
354 iso_pu_bacteria 2904509784 2904512900 966
355 iso_pu_bacteria 2908678064 2908681171 966
356 iso_pu_bacteria 2919069694 2919072945 966
357 iso_pu_bacteria 2974294766 2974296920 966
358 iso_pu_bacteria 2977228692 2977231108 966
359 iso_pu_bacteria 2977236895 2977239900 966
360 iso_pu_bacteria 2984542743 2984545827 966
361 3300048924 Ga0496121_0000040 Ga0496121_0000040_171058_173991 969
362 3300013250 Ga0171462_1003 Ga0171462_1003645 970
363 3300048922 Ga0496119_0001505 Ga0496119_0001505_7763_10723 970
364 3300049586 Ga0501070_0002886 Ga0501070_0002886_4175_7135 970
365 3300001979 JGI24740J21852_10004243 JGI24740J21852_100042432 972
366 3300044765 Ga0466970_0000004 Ga0466970_0000004_100901_103819 972

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17760

UvrA_inter

UvrA interaction domain

163

271

0.98

PF17755

UvrA_DNA-bind

UvrA DNA-binding domain

325

436

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fpn-assembly2.cif.gz_A crystal structure of uvra-uvrb interaction domains 0.9684 136 257
3fpn-assembly2.cif.gz_A crystal structure of uvra-uvrb interaction domains 0.9605 136 257
6n9l-assembly1.cif.gz_A crystal structure of t. maritima uvra d117-399 with adp 0.9458 11 951
3ux8-assembly1.cif.gz_A crystal structure of uvra 0.945 11 970
6n9l-assembly1.cif.gz_A crystal structure of t. maritima uvra d117-399 with adp 0.9414 11 951
ID Description Score Start End Superfamily
af_P0A698_135_242_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9822 144 247 3.30.190.20
af_Q2G046_135_246_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9784 142 256 3.30.190.20
af_Q2G046_135_246_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9613 142 256 3.30.190.20
2r6fB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9563 12 600 3.40.50.300
2r6fA03 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9508 138 259 3.30.1490.20
ID Description Score Start End GO Terms
AF-A0A7V9LZW2-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9896 782 952 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
AF-A0A349UYQ8-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9859 597 709 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
AF-A0A1C5K616-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9822 799 937 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
AF-A0A259RLN3-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9814 798 952 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
GO:0016887
AF-A0A0G0LIA4-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9783 803 947 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
GO:0016887

Feature Viewer

pLDDT pTM Quality
84.73 0.74 High
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Predicted Structure (AlphaFold2)

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