F423918

General Info

Members Datasets Scaffolds Average Seq Length
366 245 294 963

Family's Representative Sequence

Representative Sequence 3300005338|Ga0068868_100045899|Ga0068868_1000458992
Length 988
Sequence MLMSALKPLAELESAGEFVPRHVGIDADDEARMLSVVGAASRRALIDQLVPASIARRAPMRLPAPLGEAEALAELRAIAAQNRVLKSFIGQGYHGTHTPGVILRNVLESPAWYTAYTPYQAEISQGRLEALVNFQTMVCDLTGMAIANASMLDEATAAAEAMTLARRSVKAKSETIVVAGDAHPQTIEVLRTRATPLGLQVVLANSADEWDRLIEGGDYFAVLAQWPATSGALHDMRGDAPRIHAHGAAFIVAADLLALALVASPGELGADIACGTTQRFGMPMGCGGPHAAYLACRDEYKRGLPGRLVGVSVDAHGAPAYRLALQTREQHIRRERATSNICTAQVLPAVVASMYAVYHGPHGLKRIAERIASYTAILAEGLRRLGVSVRSESAFDTLTIDSGADTGALFQRAAEAGMNLRRYPEWGDTMLGVALDETTTRDDLVALWRVFAKEGQALPELAEFERGIAPMIPEQLRRSSPFLTHPVFNRHHSETAMLRYLRGLADKDLALDRSMIPLGSCTMKLNASSEMIPITWPEFANIHPFAPADQRAGYETLARQLESWLCEATGYAGVSLQPNAGSQGEYAGLLAIRALHASRGESQRTVCLIPESAHGTNPASAQMAGLQVVVTRCDAEGSVDLADLEAKCRQHADRLACVMITYPSTYGVFERRVRELCEIVHRHGGKVYVDGANMNALVGVAAPGEFGGDVSHLNLHKTFCIPHGGGGPGVGPVCVVADLVPFLPGHASGGFSGADEGGVGAVSAAPLGNAAVLPISWMYMRMMGSEGLRTATETAILSANYIAARLADHYELHFSGNIAGIKGGGVAHECILDLRPLKDATGGEKGERGTSEQGISAEDVAKRLIDYGFHAPTLSFPVAGTLMVEPTESESLAELDRFCDAMIAIRAEIAKVESGAWPRDDNPLKAAPHTAAALLSAEWPHAYSREDAAYPKASLRHGKYWSPVGRVDNVWGDRNLSCSCPPLASYED

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
3 2547132374 Acidovorax radicis N35 Isolate Unclassified
4 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
5 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
6 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
7 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
8 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
9 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
10 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
11 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
12 2643221570 Acidovorax sp. Root568 Isolate Unclassified
13 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
14 2643221596 Acidovorax sp. Root70 Isolate Unclassified
15 2643221609 Acidovorax sp. Root217 Isolate Unclassified
16 2643221611 Acidovorax sp. Root219 Isolate Unclassified
17 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
18 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
19 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
20 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
21 2643221652 Acidovorax sp. Root402 Isolate Unclassified
22 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
23 2643221658 Variovorax sp. Root411 Isolate Unclassified
24 2643221660 Methylibium sp. Root1272 Isolate Unclassified
25 2643221672 Variovorax sp. Root434 Isolate Unclassified
26 2643221683 Variovorax sp. Root473 Isolate Unclassified
27 2643221717 Acidovorax sp. Root267 Isolate Unclassified
28 2721755523 Delftia sp. HK171 Isolate Unclassified
29 2738541277 Variovorax sp. GV051 Isolate Unclassified
30 2738541307 Variovorax sp. GV008 Isolate Unclassified
31 2738543012 Acidovorax sp. CF301 Isolate Unclassified
32 2738543019 Variovorax sp. GV040 Isolate Unclassified
33 2816332133 Acidovorax radicis 2721A Isolate Unclassified
34 2818991446 Variovorax sp. 1180 Isolate Unclassified
35 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
36 2831864461 Roseateles noduli HZ7 Isolate Nodule
37 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
38 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
39 2842677519 Variovorax sp. R-72495 Isolate Unclassified
40 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
41 2842733646 Variovorax sp. R-72446 Isolate Unclassified
42 2842747753 Variovorax sp. R-72060 Isolate Unclassified
43 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
44 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
45 2885198086 Variovorax sp. 679 Isolate Unclassified
46 2885211737 Variovorax sp. 553 Isolate Unclassified
47 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
48 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
49 2899924645 Variovorax sp. 369 Isolate Unclassified
50 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
51 2904456579 Variovorax sp. 2002 Isolate Unclassified
52 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
53 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
54 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
55 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
56 2928037797 Variovorax sp. 1126 Isolate Unclassified
57 2928044640 Variovorax sp. 1128 Isolate Unclassified
58 2928051484 Variovorax sp. 1133 Isolate Unclassified
59 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
60 2928070936 Variovorax gossypii 1167 Isolate Unclassified
61 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
62 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
63 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
64 2929520902 Variovorax beijingensis 502 Isolate Unclassified
65 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
66 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
67 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
68 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
69 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
70 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
71 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
72 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
73 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
74 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
75 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
76 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
77 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
78 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
79 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
80 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
81 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
82 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
83 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
84 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
85 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
86 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
87 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
88 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
89 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
90 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
91 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
92 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
93 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
94 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
95 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
96 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
97 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
98 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
99 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
100 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
101 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
102 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
103 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
104 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
105 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
106 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
107 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
108 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
109 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
110 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
111 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
112 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
113 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
114 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
115 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
116 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
117 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
118 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
119 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
120 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
121 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
122 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
123 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
124 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
125 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
126 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
127 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
128 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
129 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
130 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
134 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
135 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
136 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
138 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
139 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
140 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
141 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
142 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
143 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
145 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
146 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
147 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
148 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
149 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
150 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
151 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
152 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
165 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
166 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
167 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
168 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
169 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
170 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
171 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
172 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
173 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
174 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
175 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
176 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
177 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
178 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
179 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
180 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
181 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
182 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
183 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
184 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
185 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
186 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
187 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
188 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
189 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
190 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
191 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
192 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
193 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
194 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
195 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
196 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
197 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
198 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
199 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
200 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
201 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
202 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
203 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
204 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
205 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
206 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
207 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
208 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
209 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
210 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
211 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
212 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
213 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
214 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
215 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
216 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
217 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
218 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
219 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
220 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
221 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
222 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
223 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
224 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
225 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
226 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
227 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
228 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
229 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
230 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
231 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
232 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
233 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
234 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
235 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
236 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
237 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
238 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
239 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
240 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
241 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
242 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
243 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
244 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
245 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.33
Metatranscriptomes 0
Isolates 19.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 34.43
Nodule 2.46
Rhizoplane 3.01
Rhizosphere 40.71
Stem 0
Stem Tuber 0
Unclassified 19.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000090 3300002704 Bacteria 51836
2 JGI25156J39149_1000148 3300002705 Bacteria 51890
3 JGI25154J39366_1000155 3300002738 Bacteria 52889
4 JGI25157J39369_1000183 3300002741 Bacteria 52889
5 JGI25152J39213_1002389 3300002773 Bacteria 7186
6 JGI25159J45721_1000691 3300002987 Bacteria 14796
7 JGI25159J45721_1003197 3300002987 Bacteria 5873
8 JGI25160J50197_1000059 3300003354 Bacteria 116962
9 JGI25161J50226_1000109 3300003374 Bacteria 64835
10 Ga0055525_1000011 3300003759 Bacteria 503124
11 Ga0055535_1000544 3300003761 Bacteria 32432
12 Ga0055542_1000004 3300003762 Bacteria 553532
13 Ga0055526_1002106 3300003771 Bacteria 13658
14 Ga0055526_1002531 3300003771 Bacteria 12278
15 Ga0055526_1009100 3300003771 Bacteria 4842
16 Ga0055526_1010913 3300003771 Bacteria 4163
17 Ga0055537_1000067 3300003773 Bacteria 75689
18 Ga0055524_1000084 3300003775 Bacteria 119107
19 Ga0055524_1000279 3300003775 Bacteria 50624
20 Ga0055536_1001302 3300003781 Bacteria 15354
21 Ga0055534_1000079 3300003784 Bacteria 75689
22 Ga0055530_10000730 3300003791 Bacteria 27505
23 Ga0055530_10001255 3300003791 Bacteria 19265
24 Ga0055530_10002205 3300003791 Bacteria 12893
25 Ga0055530_10002701 3300003791 Bacteria 11037
26 Ga0055530_10002983 3300003791 Bacteria 10178
27 Ga0055540_1000004 3300003792 Bacteria 395545
28 Ga0055540_1000290 3300003792 Bacteria 45060
29 Ga0055540_1000553 3300003792 Bacteria 27912
30 Ga0055531_10000269 3300003794 Bacteria 53905
31 Ga0055531_10000726 3300003794 Bacteria 27911
32 Ga0055531_10000873 3300003794 Bacteria 24722
33 Ga0065165_1000006 3300005262 Bacteria 352298
34 Ga0065165_1000230 3300005262 Bacteria 97470
35 Ga0065165_1001042 3300005262 Bacteria 33471
36 Ga0070670_100010162 3300005331 Bacteria 8033
37 Ga0070680_100004247 3300005336 Bacteria 10755
38 Ga0068868_100045899 3300005338 Bacteria 3419
39 Ga0070675_100013051 3300005354 Bacteria 6526
40 Ga0070675_100022922 3300005354 Bacteria 4989
41 Ga0070671_100001462 3300005355 Bacteria 17636
42 Ga0070671_100008065 3300005355 Bacteria 8430
43 Ga0070673_100006012 3300005364 Bacteria 7856
44 Ga0070659_100000929 3300005366 Bacteria 21500
45 Ga0070667_100019511 3300005367 Bacteria 5625
46 Ga0068867_100000048 3300005459 Bacteria 73813
47 Ga0068867_100020773 3300005459 Bacteria 4681
48 Ga0070706_100002804 3300005467 Bacteria 17435
49 Ga0070684_100053237 3300005535 Bacteria 3522
50 Ga0070664_100000282 3300005564 Bacteria 36692
51 Ga0070664_100051630 3300005564 Bacteria 3481
52 Ga0068859_100017678 3300005617 Bacteria 7168
53 Ga0068860_100002775 3300005843 Bacteria 18212
54 Ga0075367_10008481 3300006178 Bacteria 5326
55 Ga0075366_10000447 3300006195 Bacteria 19185
56 Ga0075366_10007579 3300006195 Bacteria 6003
57 Ga0075370_10002297 3300006353 Bacteria 8819
58 Ga0075370_10006077 3300006353 Bacteria 6051
59 Ga0075370_10007252 3300006353 Bacteria 5640
60 Ga0068871_100001150 3300006358 Bacteria 17744
61 Ga0097620_100017678 3300006931 Bacteria 7168
62 Ga0079104_1000007 3300006946 Bacteria 390531
63 Ga0079104_1000013 3300006946 Bacteria 349477
64 Ga0099826_10003798 3300006948 Bacteria 10395
65 Ga0105243_10002575 3300009148 Bacteria 15145
66 Ga0105248_10001394 3300009177 Bacteria 26961
67 Ga0105237_10003826 3300009545 Bacteria 17689
68 Ga0105237_10008492 3300009545 Bacteria 11114
69 Ga0105239_10003842 3300010375 Bacteria 18243
70 Ga0157319_1000012 3300012497 Bacteria 165761
71 Ga0157369_10006174 3300013105 Bacteria 13906
72 Ga0163162_10038759 3300013306 Bacteria 4757
73 Ga0157372_10064081 3300013307 Bacteria 4123
74 Ga0182008_10000330 3300014497 Bacteria 37364
75 Ga0182008_10007430 3300014497 Bacteria 6051
76 Ga0157377_10000056 3300014745 Bacteria 87608
77 Ga0157376_10007496 3300014969 Bacteria 7795
78 Ga0182007_10001490 3300015262 Bacteria 12533
79 Ga0183362_10001 3300015683 Bacteria 2046624
80 Ga0213872_10000027 3300021361 Bacteria 148884
81 Ga0213872_10000049 3300021361 Bacteria 109094
82 Ga0213872_10000143 3300021361 Bacteria 64736
83 Ga0213872_10000156 3300021361 Bacteria 62916
84 Ga0213872_10014166 3300021361 Bacteria 3724
85 Ga0209435_100014 3300025206 Bacteria 322129
86 Ga0209436_102041 3300025208 Bacteria 6353
87 Ga0209436_102949 3300025208 Bacteria 4756
88 Ga0209672_100230 3300025228 Bacteria 42658
89 Ga0209563_100005 3300025230 Bacteria 1774893
90 Ga0209258_100022 3300025242 Bacteria 553584
91 Ga0207425_1000392 3300025245 Bacteria 29503
92 Ga0207425_1000411 3300025245 Bacteria 28874
93 Ga0207425_1004479 3300025245 Bacteria 4178
94 Ga0209646_1000001 3300025246 Bacteria 3092932
95 Ga0209026_1000137 3300025250 Bacteria 116282
96 Ga0209148_1000034 3300025254 Bacteria 553584
97 Ga0209759_1000013 3300025256 Bacteria 399300
98 Ga0209129_1000025 3300025258 Bacteria 413639
99 Ga0209129_1000111 3300025258 Bacteria 148853
100 Ga0209565_1000028 3300025263 Bacteria 348536
101 Ga0209565_1000040 3300025263 Bacteria 266543
102 Ga0209565_1000146 3300025263 Bacteria 97720
103 Ga0209565_1000449 3300025263 Bacteria 32070
104 Ga0209673_1000035 3300025273 Bacteria 328411
105 Ga0209673_1000109 3300025273 Bacteria 183000
106 Ga0209130_1000052 3300025284 Bacteria 216971
107 Ga0209130_1000470 3300025284 Bacteria 41506
108 Ga0209130_1000492 3300025284 Bacteria 40584
109 Ga0209130_1000759 3300025284 Bacteria 27970
110 Ga0209675_1000024 3300025291 Bacteria 312615
111 Ga0209675_1000111 3300025291 Bacteria 114805
112 Ga0209675_1000331 3300025291 Bacteria 41480
113 Ga0209675_1003000 3300025291 Bacteria 8305
114 Ga0209676_1000005 3300025292 Bacteria 1076001
115 Ga0209676_1000254 3300025292 Bacteria 113136
116 Ga0209676_1000634 3300025292 Bacteria 50573
117 Ga0209025_1000096 3300025294 Bacteria 239153
118 Ga0209025_1000116 3300025294 Bacteria 218293
119 Ga0209025_1000394 3300025294 Bacteria 90347
120 Ga0209025_1001864 3300025294 Bacteria 24710
121 Ga0209025_1006211 3300025294 Bacteria 9376
122 Ga0209564_1000003 3300025295 Bacteria 1585848
123 Ga0209564_1000039 3300025295 Bacteria 413604
124 Ga0209564_1000155 3300025295 Bacteria 165859
125 Ga0209564_1000292 3300025295 Bacteria 101735
126 Ga0209564_1000531 3300025295 Bacteria 62085
127 Ga0209564_1000714 3300025295 Bacteria 48032
128 Ga0209758_1000107 3300025297 Bacteria 218293
129 Ga0209758_1000210 3300025297 Bacteria 127919
130 Ga0209758_1000311 3300025297 Bacteria 94121
131 Ga0209050_1000007 3300025298 Bacteria 1187891
132 Ga0209050_1000023 3300025298 Bacteria 537172
133 Ga0209050_1000230 3300025298 Bacteria 122752
134 Ga0209050_1000497 3300025298 Bacteria 66982
135 Ga0209256_1000003 3300025299 Bacteria 1661127
136 Ga0209256_1000038 3300025299 Bacteria 375225
137 Ga0209256_1000071 3300025299 Bacteria 242618
138 Ga0209256_1000087 3300025299 Bacteria 218290
139 Ga0209256_1000373 3300025299 Bacteria 71879
140 Ga0207426_1000090 3300025302 Bacteria 280662
141 Ga0207426_1000123 3300025302 Bacteria 218290
142 Ga0207426_1000306 3300025302 Bacteria 96112
143 Ga0207426_1003626 3300025302 Bacteria 8175
144 Ga0209051_1000009 3300025303 Bacteria 706778
145 Ga0209051_1000016 3300025303 Bacteria 541891
146 Ga0209051_1000017 3300025303 Bacteria 537172
147 Ga0209051_1000073 3300025303 Bacteria 208874
148 Ga0209051_1000136 3300025303 Bacteria 138015
149 Ga0209051_1000262 3300025303 Bacteria 87898
150 Ga0209051_1005512 3300025303 Bacteria 7381
151 Ga0209257_1000011 3300025304 Bacteria 1112630
152 Ga0209257_1000041 3300025304 Bacteria 537172
153 Ga0209257_1000055 3300025304 Bacteria 415534
154 Ga0209257_1000115 3300025304 Bacteria 230858
155 Ga0209257_1000139 3300025304 Bacteria 202285
156 Ga0209257_1000671 3300025304 Bacteria 53537
157 Ga0207655_1005647 3300025728 Bacteria 8460
158 Ga0207682_10007445 3300025893 Bacteria 4364
159 Ga0207645_10003763 3300025907 Bacteria 11395
160 Ga0207645_10005847 3300025907 Bacteria 8865
161 Ga0207645_10030967 3300025907 Bacteria 3446
162 Ga0207684_10005167 3300025910 Bacteria 12152
163 Ga0207671_10020529 3300025914 Bacteria 5027
164 Ga0207649_10002779 3300025920 Bacteria 9673
165 Ga0207650_10004424 3300025925 Bacteria 9602
166 Ga0207706_10002080 3300025933 Bacteria 19584
167 Ga0207706_10006600 3300025933 Bacteria 10745
168 Ga0207709_10000155 3300025935 Bacteria 93200
169 Ga0207709_10000233 3300025935 Bacteria 70451
170 Ga0207709_10001376 3300025935 Bacteria 17063
171 Ga0207691_10041067 3300025940 Bacteria 4273
172 Ga0207691_10047126 3300025940 Bacteria 3957
173 Ga0207711_10043654 3300025941 Bacteria 3825
174 Ga0207711_10066521 3300025941 Bacteria 3117
175 Ga0207679_10001497 3300025945 Bacteria 14638
176 Ga0207677_10005963 3300026023 Bacteria 6634
177 Ga0207708_10010681 3300026075 Bacteria 6822
178 Ga0207648_10000492 3300026089 Bacteria 44104
179 Ga0207648_10006767 3300026089 Bacteria 11366
180 Ga0207648_10033428 3300026089 Bacteria 4536
181 Ga0207676_10007879 3300026095 Bacteria 7577
182 Ga0207675_100001136 3300026118 Bacteria 26377
183 Ga0209281_1000020 3300027111 Bacteria 575972
184 Ga0209281_1000182 3300027111 Bacteria 145698
185 Ga0209968_1000264 3300027526 Bacteria 8964
186 Ga0209282_1000353 3300027666 Bacteria 22653
187 Ga0209966_1000005 3300027695 Bacteria 103734
188 Ga0268264_10010400 3300028381 Bacteria 7693
189 Ga0307517_10013013 3300028786 Bacteria 11343
190 Ga0307515_10000028 3300028794 Bacteria 368467
191 Ga0307515_10000459 3300028794 Bacteria 97482
192 Ga0307515_10009940 3300028794 Bacteria 18315
193 Ga0307512_10015183 3300030522 Bacteria 7151
194 Ga0265330_10000032 3300031235 Bacteria 130592
195 Ga0265332_10000001 3300031238 Bacteria 863783
196 Ga0265332_10000014 3300031238 Bacteria 249035
197 Ga0265340_10020972 3300031247 Bacteria 3350
198 Ga0265331_10012787 3300031250 Bacteria 4534
199 Ga0265327_10000083 3300031251 Bacteria 204923
200 Ga0265327_10007804 3300031251 Bacteria 8151
201 Ga0307513_10000006 3300031456 Bacteria 470848
202 Ga0307513_10000011 3300031456 Bacteria 354929
203 Ga0307513_10021634 3300031456 Bacteria 7585
204 Ga0307509_10000180 3300031507 Bacteria 98647
205 Ga0307509_10006786 3300031507 Bacteria 15239
206 Ga0307408_100000048 3300031548 Bacteria 165579
207 Ga0307408_100031945 3300031548 Bacteria 3669
208 Ga0307508_10000017 3300031616 Bacteria 203567
209 Ga0307508_10000078 3300031616 Bacteria 113416
210 Ga0307508_10000379 3300031616 Bacteria 53710
211 Ga0307514_10015339 3300031649 Bacteria 6326
212 Ga0265314_10000022 3300031711 Bacteria 297299
213 Ga0265314_10003188 3300031711 Bacteria 16060
214 Ga0307516_10004754 3300031730 Bacteria 16580
215 Ga0307516_10006726 3300031730 Bacteria 13435
216 Ga0307406_10000230 3300031901 Bacteria 34225
217 Ga0307406_10005245 3300031901 Bacteria 7083
218 Ga0307416_100013556 3300032002 Bacteria 5547
219 Ga0307411_10020249 3300032005 Bacteria 3864
220 Ga0307510_10016462 3300033180 Bacteria 8727
221 Ga0373937_0007675 3300036401 Bacteria 9347
222 Ga0395899_0003318 3300037312 Bacteria 12751
223 Ga0395900_0000046 3300037418 Bacteria 230114
224 Ga0395900_0018811 3300037418 Bacteria 7045
225 Ga0395898_0003038 3300037466 Bacteria 19013
226 Ga0395898_0012365 3300037466 Bacteria 8827
227 Ga0395898_0013569 3300037466 Bacteria 8385
228 Ga0395905_0000704 3300037471 Bacteria 44377
229 Ga0395905_0000712 3300037471 Bacteria 43953
230 Ga0395905_0001653 3300037471 Bacteria 26363
231 Ga0395905_0004994 3300037471 Bacteria 13671
232 Ga0395905_0027699 3300037471 Bacteria 5343
233 Ga0436365_0947225 3300039437 Bacteria 3787
234 Ga0436361_0082864 3300039447 Bacteria 107951
235 Ga0436361_0349482 3300039447 Bacteria 149171
236 Ga0436361_0669746 3300039447 Bacteria 73604
237 Ga0436361_0923111 3300039447 Bacteria 3895
238 Ga0439432_000647 3300042006 Bacteria 13058
239 Ga0450918_000081 3300042531 Bacteria 19897
240 Ga0451577_0000068 3300042876 Bacteria 241923
241 Ga0451577_0009869 3300042876 Bacteria 9149
242 Ga0466969_0000031 3300044656 Bacteria 86708
243 Ga0466972_0010292 3300044658 Bacteria 4697
244 Ga0453683_0002555 3300044673 Bacteria 14028
245 Ga0466966_0001562 3300044684 Bacteria 14708
246 Ga0453684_0000126 3300044712 Bacteria 336395
247 Ga0466959_0011631 3300045049 Bacteria 6327
248 Ga0451576_0006096 3300045051 Bacteria 14859
249 Ga0495592_0001081 3300046454 Bacteria 18882
250 Ga0495637_0008516 3300046520 Bacteria 5032
251 Ga0495633_0000933 3300046558 Bacteria 24693
252 Ga0495656_0000146 3300046615 Bacteria 26151
253 Ga0495625_0000311 3300046660 Bacteria 74209
254 Ga0495625_0000602 3300046660 Bacteria 52321
255 Ga0495658_0042677 3300046683 Bacteria 2533
256 Ga0495649_0001842 3300046694 Bacteria 15547
257 Ga0495687_000604 3300047443 Bacteria 41982
258 Ga0496101_0001287 3300048904 Bacteria 14996
259 Ga0496103_0025595 3300048906 Bacteria 3568
260 Ga0496104_0023462 3300048907 Bacteria 5672
261 Ga0496105_0011533 3300048908 Bacteria 6986
262 Ga0496106_0019164 3300048909 Bacteria 5073
263 Ga0496106_0022116 3300048909 Bacteria 4723
264 Ga0496112_0003563 3300048915 Bacteria 12936
265 Ga0496114_0006098 3300048917 Bacteria 9493
266 Ga0496117_0012426 3300048920 Bacteria 7505
267 Ga0496122_0000584 3300048925 Bacteria 74681
268 Ga0496122_0033851 3300048925 Bacteria 4194
269 Ga0496123_0000308 3300048926 Bacteria 94712
270 Ga0501043_0000112 3300049579 Bacteria 76249
271 Ga0501046_0000146 3300049580 Bacteria 74204
272 Ga0501047_0000192 3300049581 Bacteria 74300
273 Ga0501048_0000494 3300049582 Bacteria 27525
274 Ga0501198_000021 3300049649 Bacteria 70854
275 nmdc:mga03683_5572_c1 3300050489 Bacteria 4259
276 nmdc:mga0yw44_8543_c1 3300050492 Bacteria 5111
277 nmdc:mga0k408_269_c2 3300050493 Bacteria 14973
278 nmdc:mga0k408_5116_c1 3300050493 Bacteria 6946
279 nmdc:mga06z11_5792_c1 3300050494 Bacteria 4983
280 nmdc:mga07m45_103_c1 3300050496 Bacteria 33229
281 nmdc:mga07m45_2349_c1 3300050496 Bacteria 8882
282 nmdc:mga07m45_2858_c1 3300050496 Bacteria 8176
283 nmdc:mga07m45_61_c1 3300050496 Bacteria 42628
284 Ga0500578_0000829 3300053086 Bacteria 35715
285 Ga0500643_002026 3300053087 Bacteria 10878
286 Ga0500644_0002102 3300053088 Bacteria 5054
287 Ga0500651_0000738 3300053093 Bacteria 15959
288 Ga0500651_0002961 3300053093 Bacteria 9149
289 Ga0500658_0000359 3300053134 Bacteria 20169
290 Ga0500658_0000360 3300053134 Bacteria 20156
291 Ga0500559_0000059 3300053136 Bacteria 87846
292 Ga0500622_0000043 3300053156 Bacteria 161080
293 Ga0500622_0001424 3300053156 Bacteria 19240
294 Ga0500645_001860 3300053730 Bacteria 10113

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046683 Ga0495658_0042677 Ga0495658_0042677_57_2513 806
2 3300048906 Ga0496103_0025595 Ga0496103_0025595_19_2541 837
3 3300025228 Ga0209672_100230 Ga0209672_10023011 881
4 3300042876 Ga0451577_0009869 Ga0451577_0009869_6379_9135 902
5 3300021361 Ga0213872_10000049 Ga0213872_1000004922 912
6 3300039447 Ga0436361_0082864 Ga0436361_0082864_80207_83119 912
7 3300031730 Ga0307516_10006726 Ga0307516_100067266 920
8 3300003775 Ga0055524_1000084 Ga0055524_100008443 922
9 3300025299 Ga0209256_1000071 Ga0209256_100007143 922
10 3300048917 Ga0496114_0006098 Ga0496114_0006098_786_3695 922
11 3300021361 Ga0213872_10000143 Ga0213872_1000014330 927
12 3300006353 Ga0075370_10002297 Ga0075370_100022974 928
13 3300050496 nmdc:mga07m45_2858_c1 nmdc:mga07m45_2858_c1_158_3127 928
14 3300009545 Ga0105237_10003826 Ga0105237_100038267 929
15 3300010375 Ga0105239_10003842 Ga0105239_100038429 929
16 3300003791 Ga0055530_10002983 Ga0055530_100029833 930
17 3300003792 Ga0055540_1000004 Ga0055540_1000004216 930
18 3300005366 Ga0070659_100000929 Ga0070659_10000092916 930
19 3300006946 Ga0079104_1000013 Ga0079104_1000013235 930
20 3300025303 Ga0209051_1000016 Ga0209051_1000016309 930
21 3300025304 Ga0209257_1000115 Ga0209257_100011518 930
22 3300027111 Ga0209281_1000182 Ga0209281_1000182101 930
23 3300046660 Ga0495625_0000602 Ga0495625_0000602_22127_25039 930
24 3300021361 Ga0213872_10000156 Ga0213872_1000015647 931
25 3300031730 Ga0307516_10004754 Ga0307516_100047548 931
26 3300050489 nmdc:mga03683_5572_c1 nmdc:mga03683_5572_c1_554_3364 931
27 3300005564 Ga0070664_100000282 Ga0070664_10000028234 932
28 3300025920 Ga0207649_10002779 Ga0207649_100027795 932
29 3300025945 Ga0207679_10001497 Ga0207679_100014975 932
30 3300025299 Ga0209256_1000373 Ga0209256_10003737 933
31 3300012497 Ga0157319_1000012 Ga0157319_100001217 934
32 3300025297 Ga0209758_1000311 Ga0209758_100031165 935
33 3300031616 Ga0307508_10000017 Ga0307508_100000176 935
34 3300005459 Ga0068867_100000048 Ga0068867_10000004824 936
35 3300014745 Ga0157377_10000056 Ga0157377_1000005660 936
36 3300025935 Ga0207709_10001376 Ga0207709_1000137612 936
37 3300026089 Ga0207648_10000492 Ga0207648_1000049224 936
38 3300031238 Ga0265332_10000014 Ga0265332_100000144 936
39 3300039447 Ga0436361_0669746 Ga0436361_0669746_52645_55542 936
40 3300042531 Ga0450918_000081 Ga0450918_000081_11072_13981 936
41 3300047443 Ga0495687_000604 Ga0495687_000604_11684_14641 937
42 3300005262 Ga0065165_1000006 Ga0065165_100000626 938
43 3300037471 Ga0395905_0001653 Ga0395905_0001653_2332_5223 939
44 3300005331 Ga0070670_100010162 Ga0070670_1000101625 940
45 3300006195 Ga0075366_10000447 Ga0075366_100004479 940
46 3300025925 Ga0207650_10004424 Ga0207650_100044243 940
47 3300046694 Ga0495649_0001842 Ga0495649_0001842_2921_5872 940
48 3300050493 nmdc:mga0k408_269_c2 nmdc:mga0k408_269_c2_4235_7198 940
49 3300050496 nmdc:mga07m45_61_c1 nmdc:mga07m45_61_c1_7545_10508 940
50 3300003794 Ga0055531_10000269 Ga0055531_1000026925 941
51 3300006353 Ga0075370_10006077 Ga0075370_100060772 941
52 3300025303 Ga0209051_1000136 Ga0209051_10001366 941
53 3300025304 Ga0209257_1000055 Ga0209257_1000055189 941
54 3300050493 nmdc:mga0k408_5116_c1 nmdc:mga0k408_5116_c1_1761_4718 941
55 3300050496 nmdc:mga07m45_2349_c1 nmdc:mga07m45_2349_c1_5742_8705 941
56 3300002773 JGI25152J39213_1002389 JGI25152J39213_10023893 942
57 3300003771 Ga0055526_1002531 Ga0055526_10025315 942
58 3300025245 Ga0207425_1000411 Ga0207425_100041114 942
59 3300025258 Ga0209129_1000025 Ga0209129_100002588 942
60 3300025294 Ga0209025_1000096 Ga0209025_1000096189 942
61 3300025295 Ga0209564_1000039 Ga0209564_100003988 942
62 3300025297 Ga0209758_1000210 Ga0209758_100021088 942
63 3300044673 Ga0453683_0002555 Ga0453683_0002555_10075_12990 943
64 3300046615 Ga0495656_0000146 Ga0495656_0000146_12034_14943 943
65 3300031548 Ga0307408_100031945 Ga0307408_1000319452 944
66 3300031901 Ga0307406_10005245 Ga0307406_100052453 944
67 3300032002 Ga0307416_100013556 Ga0307416_1000135562 944
68 3300032005 Ga0307411_10020249 Ga0307411_100202492 944
69 3300037471 Ga0395905_0004994 Ga0395905_0004994_1695_4589 944
70 3300021361 Ga0213872_10014166 Ga0213872_100141662 945
71 3300039447 Ga0436361_0923111 Ga0436361_0923111_151_3015 945
72 3300003759 Ga0055525_1000011 Ga0055525_1000011132 946
73 3300025230 Ga0209563_100005 Ga0209563_100005457 946
74 3300021361 Ga0213872_10000027 Ga0213872_1000002729 947
75 3300036401 Ga0373937_0007675 Ga0373937_0007675_15_2957 947
76 3300039447 Ga0436361_0349482 Ga0436361_0349482_115073_117943 947
77 3300031548 Ga0307408_100000048 Ga0307408_10000004823 948
78 3300031901 Ga0307406_10000230 Ga0307406_1000023016 948
79 iso_pu_bacteria 2831864461 2831864951 949
80 iso_pu_bacteria 2886848708 2886851710 949
81 3300005355 Ga0070671_100001462 Ga0070671_1000014629 950
82 iso_pu_bacteria 2585428062 2587755827 950
83 iso_pu_bacteria 2643221592 2643970548 950
84 iso_pu_bacteria 2643221625 2644139171 950
85 iso_pu_bacteria 2643221648 2644274781 950
86 iso_pu_bacteria 2585428057 2587730641 951
87 iso_pu_bacteria 2585428058 2587732067 951
88 iso_pu_bacteria 2588253510 2588292047 951
89 3300003771 Ga0055526_1010913 Ga0055526_10109133 952
90 3300006358 Ga0068871_100001150 Ga0068871_10000115011 952
91 3300025295 Ga0209564_1000003 Ga0209564_10000031081 952
92 3300025303 Ga0209051_1005512 Ga0209051_10055123 952
93 3300025304 Ga0209257_1000671 Ga0209257_10006717 952
94 3300045051 Ga0451576_0006096 Ga0451576_0006096_8063_11002 952
95 iso_pu_bacteria 2643221654 2644304384 952
96 3300005262 Ga0065165_1000230 Ga0065165_100023033 953
97 iso_pu_bacteria 2643221644 2644245362 953
98 3300042876 Ga0451577_0000068 Ga0451577_0000068_220887_223817 954
99 3300044658 Ga0466972_0010292 Ga0466972_0010292_920_3811 954
100 3300044712 Ga0453684_0000126 Ga0453684_0000126_130838_133768 954
101 3300048915 Ga0496112_0003563 Ga0496112_0003563_4052_6952 954
102 3300049579 Ga0501043_0000112 Ga0501043_0000112_6099_9011 954
103 3300049580 Ga0501046_0000146 Ga0501046_0000146_6103_9015 954
104 3300049581 Ga0501047_0000192 Ga0501047_0000192_65290_68202 954
105 3300049582 Ga0501048_0000494 Ga0501048_0000494_6081_8993 954
106 3300053086 Ga0500578_0000829 Ga0500578_0000829_16729_19626 954
107 iso_pu_bacteria 2643221660 2644340107 954
108 3300003791 Ga0055530_10002205 Ga0055530_100022059 955
109 3300005262 Ga0065165_1001042 Ga0065165_100104212 955
110 3300005617 Ga0068859_100017678 Ga0068859_1000176783 955
111 3300006931 Ga0097620_100017678 Ga0097620_1000176783 955
112 3300013306 Ga0163162_10038759 Ga0163162_100387593 955
113 3300025298 Ga0209050_1000230 Ga0209050_1000230111 955
114 3300025940 Ga0207691_10041067 Ga0207691_100410672 955
115 3300025941 Ga0207711_10066521 Ga0207711_100665211 955
116 3300048907 Ga0496104_0023462 Ga0496104_0023462_381_3305 955
117 3300053093 Ga0500651_0002961 Ga0500651_0002961_4886_7786 955
118 3300053156 Ga0500622_0000043 Ga0500622_0000043_147677_150577 955
119 3300005354 Ga0070675_100013051 Ga0070675_1000130512 956
120 3300005354 Ga0070675_100022922 Ga0070675_1000229222 956
121 3300005355 Ga0070671_100008065 Ga0070671_1000080656 956
122 3300005364 Ga0070673_100006012 Ga0070673_1000060123 956
123 3300005459 Ga0068867_100020773 Ga0068867_1000207733 956
124 3300005467 Ga0070706_100002804 Ga0070706_1000028047 956
125 3300006178 Ga0075367_10008481 Ga0075367_100084813 956
126 3300006195 Ga0075366_10007579 Ga0075366_100075793 956
127 3300006353 Ga0075370_10007252 Ga0075370_100072524 956
128 3300009177 Ga0105248_10001394 Ga0105248_1000139428 956
129 3300009545 Ga0105237_10008492 Ga0105237_100084927 956
130 3300025893 Ga0207682_10007445 Ga0207682_100074452 956
131 3300025907 Ga0207645_10005847 Ga0207645_100058472 956
132 3300025910 Ga0207684_10005167 Ga0207684_100051676 956
133 3300025914 Ga0207671_10020529 Ga0207671_100205292 956
134 3300025933 Ga0207706_10002080 Ga0207706_1000208010 956
135 3300025940 Ga0207691_10047126 Ga0207691_100471263 956
136 3300026089 Ga0207648_10033428 Ga0207648_100334282 956
137 3300026095 Ga0207676_10007879 Ga0207676_100078794 956
138 3300028786 Ga0307517_10013013 Ga0307517_100130134 956
139 3300028794 Ga0307515_10009940 Ga0307515_100099405 956
140 3300030522 Ga0307512_10015183 Ga0307512_100151835 956
141 3300031250 Ga0265331_10012787 Ga0265331_100127872 956
142 3300031251 Ga0265327_10000083 Ga0265327_100000838 956
143 3300031507 Ga0307509_10000180 Ga0307509_1000018074 956
144 3300031507 Ga0307509_10006786 Ga0307509_1000678611 956
145 3300031616 Ga0307508_10000078 Ga0307508_1000007892 956
146 3300031616 Ga0307508_10000379 Ga0307508_1000037913 956
147 3300033180 Ga0307510_10016462 Ga0307510_100164623 956
148 3300037418 Ga0395900_0000046 Ga0395900_0000046_59087_61984 956
149 3300037466 Ga0395898_0003038 Ga0395898_0003038_2914_5811 956
150 3300037471 Ga0395905_0027699 Ga0395905_0027699_1056_3959 956
151 3300044656 Ga0466969_0000031 Ga0466969_0000031_56032_58929 956
152 3300045049 Ga0466959_0011631 Ga0466959_0011631_526_3423 956
153 3300046454 Ga0495592_0001081 Ga0495592_0001081_6873_9782 956
154 3300048909 Ga0496106_0022116 Ga0496106_0022116_204_3113 956
155 3300049649 Ga0501198_000021 Ga0501198_000021_67817_70741 956
156 3300050494 nmdc:mga06z11_5792_c1 nmdc:mga06z11_5792_c1_1344_4310 956
157 3300053088 Ga0500644_0002102 Ga0500644_0002102_1260_4154 956
158 3300053136 Ga0500559_0000059 Ga0500559_0000059_52907_55801 956
159 3300053156 Ga0500622_0001424 Ga0500622_0001424_8636_11530 956
160 3300053730 Ga0500645_001860 Ga0500645_001860_3779_6688 956
161 iso_pu_bacteria 2643221628 2644162915 956
162 iso_pu_bacteria 2842677519 2842680128 956
163 iso_pu_bacteria 2904449895 2904454718 956
164 iso_pu_bacteria 2904456579 2904460359 956
165 iso_pu_bacteria 2919462493 2919464166 956
166 iso_pu_bacteria 2919704043 2919704406 956
167 iso_pu_bacteria 2928115317 2928120329 956
168 iso_pu_bacteria 2929520902 2929524556 956
169 iso_pu_bacteria 2945909444 2945912892 956
170 iso_pu_bacteria 2945945610 2945946984 956
171 iso_pu_bacteria 2945972063 2945976661 956
172 iso_pu_bacteria 2945984333 2945984834 956
173 iso_pu_bacteria 2954767861 2954771725 956
174 3300025907 Ga0207645_10030967 Ga0207645_100309672 957
175 3300027526 Ga0209968_1000264 Ga0209968_10002643 957
176 3300027695 Ga0209966_1000005 Ga0209966_100000564 957
177 iso_pu_bacteria 2513020051 2513229692 957
178 iso_pu_bacteria 2599185214 2599625876 957
179 iso_pu_bacteria 2599185226 2599675042 957
180 iso_pu_bacteria 2599185227 2599683936 957
181 iso_pu_bacteria 2599185229 2599695461 957
182 iso_pu_bacteria 2643221658 2644329526 957
183 iso_pu_bacteria 2643221672 2644398297 957
184 iso_pu_bacteria 2643221683 2644465378 957
185 iso_pu_bacteria 2738541277 2738722870 957
186 iso_pu_bacteria 2738541307 2738881438 957
187 iso_pu_bacteria 2738543019 2739283441 957
188 iso_pu_bacteria 2818991446 2819596265 957
189 iso_pu_bacteria 2831265667 2831270390 957
190 iso_pu_bacteria 2838054893 2838056617 957
191 iso_pu_bacteria 2842733646 2842736133 957
192 iso_pu_bacteria 2842747753 2842748132 957
193 iso_pu_bacteria 2885192300 2885196285 957
194 iso_pu_bacteria 2885198086 2885199772 957
195 iso_pu_bacteria 2885211737 2885213423 957
196 iso_pu_bacteria 2899924645 2899925646 957
197 iso_pu_bacteria 2904541872 2904546325 957
198 iso_pu_bacteria 2928037797 2928038257 957
199 iso_pu_bacteria 2928044640 2928046138 957
200 iso_pu_bacteria 2928051484 2928053835 957
201 iso_pu_bacteria 2928064002 2928067384 957
202 iso_pu_bacteria 2928070936 2928076355 957
203 iso_pu_bacteria 2928084124 2928088862 957
204 iso_pu_bacteria 2929160207 2929164140 957
205 3300031251 Ga0265327_10007804 Ga0265327_100078044 958
206 iso_pu_bacteria 2547132374 2548497371 958
207 iso_pu_bacteria 2643221570 2643866630 958
208 iso_pu_bacteria 2643221596 2643991390 958
209 iso_pu_bacteria 2643221609 2644062773 958
210 iso_pu_bacteria 2643221611 2644076732 958
211 iso_pu_bacteria 2643221652 2644296315 958
212 iso_pu_bacteria 2643221717 2644647724 958
213 iso_pu_bacteria 2721755523 2722883226 958
214 iso_pu_bacteria 2738543012 2739244553 958
215 iso_pu_bacteria 2816332133 2816473983 958
216 iso_pu_bacteria 2839138175 2839143584 958
217 iso_pu_bacteria 2842718218 2842722071 958
218 iso_pu_bacteria 2894023352 2894025535 958
219 iso_pu_bacteria 2932422444 2932425700 958
220 iso_pu_bacteria 2990710928 2990712180 958
221 3300003773 Ga0055537_1000067 Ga0055537_100006722 959
222 3300003784 Ga0055534_1000079 Ga0055534_100007946 959
223 3300006948 Ga0099826_10003798 Ga0099826_100037988 959
224 3300025263 Ga0209565_1000040 Ga0209565_10000407 959
225 3300025273 Ga0209673_1000109 Ga0209673_1000109156 959
226 3300025291 Ga0209675_1000024 Ga0209675_1000024261 959
227 3300025294 Ga0209025_1000394 Ga0209025_100039429 959
228 3300025303 Ga0209051_1000262 Ga0209051_100026267 959
229 3300027666 Ga0209282_1000353 Ga0209282_100035317 959
230 3300031649 Ga0307514_10015339 Ga0307514_100153394 959
231 3300046520 Ga0495637_0008516 Ga0495637_0008516_478_3384 959
232 3300046660 Ga0495625_0000311 Ga0495625_0000311_56555_59461 959
233 3300050492 nmdc:mga0yw44_8543_c1 nmdc:mga0yw44_8543_c1_1529_4435 959
234 3300050496 nmdc:mga07m45_103_c1 nmdc:mga07m45_103_c1_26206_29112 959
235 iso_pu_bacteria 2881101125 2881104202 959
236 iso_pu_bacteria 2974320154 2974323257 959
237 3300003792 Ga0055540_1000290 Ga0055540_100029045 960
238 3300003794 Ga0055531_10000873 Ga0055531_100008738 960
239 3300013105 Ga0157369_10006174 Ga0157369_1000617412 960
240 3300014497 Ga0182008_10007430 Ga0182008_100074303 960
241 3300025208 Ga0209436_102949 Ga0209436_1029493 960
242 3300025245 Ga0207425_1000392 Ga0207425_100039231 960
243 3300025258 Ga0209129_1000111 Ga0209129_100011145 960
244 3300025284 Ga0209130_1000470 Ga0209130_100047035 960
245 3300025292 Ga0209676_1000254 Ga0209676_100025469 960
246 3300025294 Ga0209025_1000116 Ga0209025_100011653 960
247 3300025295 Ga0209564_1000155 Ga0209564_100015553 960
248 3300025297 Ga0209758_1000107 Ga0209758_100010753 960
249 3300025298 Ga0209050_1000497 Ga0209050_100049713 960
250 3300025299 Ga0209256_1000087 Ga0209256_100008753 960
251 3300025302 Ga0207426_1000123 Ga0207426_100012353 960
252 3300025303 Ga0209051_1000073 Ga0209051_1000073159 960
253 3300025304 Ga0209257_1000139 Ga0209257_1000139106 960
254 3300025728 Ga0207655_1005647 Ga0207655_10056475 960
255 3300025935 Ga0207709_10000233 Ga0207709_1000023313 960
256 3300031235 Ga0265330_10000032 Ga0265330_1000003249 960
257 3300031238 Ga0265332_10000001 Ga0265332_1000000178 960
258 3300031247 Ga0265340_10020972 Ga0265340_100209722 960
259 3300031711 Ga0265314_10000022 Ga0265314_1000002278 960
260 3300048920 Ga0496117_0012426 Ga0496117_0012426_3622_6531 960
261 3300053087 Ga0500643_002026 Ga0500643_002026_2720_5629 960
262 3300053093 Ga0500651_0000738 Ga0500651_0000738_5444_8353 960
263 3300053134 Ga0500658_0000359 Ga0500658_0000359_15548_18457 960
264 3300053134 Ga0500658_0000360 Ga0500658_0000360_15535_18444 960
265 iso_pu_bacteria 2511231002 2511244866 960
266 iso_pu_bacteria 2904479285 2904483098 960
267 3300003761 Ga0055535_1000544 Ga0055535_100054419 961
268 3300003762 Ga0055542_1000004 Ga0055542_1000004471 961
269 3300003791 Ga0055530_10000730 Ga0055530_1000073020 961
270 3300003791 Ga0055530_10002701 Ga0055530_100027012 961
271 3300005367 Ga0070667_100019511 Ga0070667_1000195112 961
272 3300014497 Ga0182008_10000330 Ga0182008_100003309 961
273 3300015262 Ga0182007_10001490 Ga0182007_1000149012 961
274 3300025242 Ga0209258_100022 Ga0209258_100022471 961
275 3300025254 Ga0209148_1000034 Ga0209148_1000034471 961
276 3300025263 Ga0209565_1000146 Ga0209565_100014653 961
277 3300025284 Ga0209130_1000492 Ga0209130_10004927 961
278 3300025291 Ga0209675_1000331 Ga0209675_100033132 961
279 3300025292 Ga0209676_1000005 Ga0209676_1000005229 961
280 3300025295 Ga0209564_1000292 Ga0209564_100029284 961
281 3300025298 Ga0209050_1000007 Ga0209050_1000007868 961
282 3300025299 Ga0209256_1000038 Ga0209256_100003889 961
283 3300025302 Ga0207426_1000090 Ga0207426_100009040 961
284 3300025303 Ga0209051_1000009 Ga0209051_1000009229 961
285 3300025304 Ga0209257_1000011 Ga0209257_1000011203 961
286 3300028794 Ga0307515_10000028 Ga0307515_1000002819 961
287 3300042006 Ga0439432_000647 Ga0439432_000647_5721_8615 961
288 3300048904 Ga0496101_0001287 Ga0496101_0001287_9961_12870 961
289 3300048908 Ga0496105_0011533 Ga0496105_0011533_3109_6018 961
290 3300048925 Ga0496122_0000584 Ga0496122_0000584_41850_44750 961
291 3300048926 Ga0496123_0000308 Ga0496123_0000308_79700_82600 961
292 3300005535 Ga0070684_100053237 Ga0070684_1000532372 962
293 3300005564 Ga0070664_100051630 Ga0070664_1000516301 962
294 3300006946 Ga0079104_1000007 Ga0079104_1000007137 962
295 3300009148 Ga0105243_10002575 Ga0105243_100025754 962
296 3300013307 Ga0157372_10064081 Ga0157372_100640813 962
297 3300015683 Ga0183362_10001 Ga0183362_10001540 962
298 3300025935 Ga0207709_10000155 Ga0207709_1000015532 962
299 3300027111 Ga0209281_1000020 Ga0209281_1000020360 962
300 3300046558 Ga0495633_0000933 Ga0495633_0000933_19358_22258 962
301 3300048925 Ga0496122_0033851 Ga0496122_0033851_498_3401 962
302 3300005336 Ga0070680_100004247 Ga0070680_1000042473 963
303 3300005338 Ga0068868_100045899 Ga0068868_1000458992 963
304 3300005843 Ga0068860_100002775 Ga0068860_1000027757 963
305 3300014969 Ga0157376_10007496 Ga0157376_100074967 963
306 3300025907 Ga0207645_10003763 Ga0207645_100037636 963
307 3300025933 Ga0207706_10006600 Ga0207706_100066001 963
308 3300025941 Ga0207711_10043654 Ga0207711_100436543 963
309 3300026023 Ga0207677_10005963 Ga0207677_100059632 963
310 3300026075 Ga0207708_10010681 Ga0207708_100106812 963
311 3300026089 Ga0207648_10006767 Ga0207648_100067675 963
312 3300026118 Ga0207675_100001136 Ga0207675_1000011365 963
313 3300028381 Ga0268264_10010400 Ga0268264_100104005 963
314 3300028794 Ga0307515_10000459 Ga0307515_1000045939 963
315 3300031456 Ga0307513_10021634 Ga0307513_100216343 963
316 3300031711 Ga0265314_10003188 Ga0265314_100031883 963
317 3300037312 Ga0395899_0003318 Ga0395899_0003318_7579_10476 963
318 3300037418 Ga0395900_0018811 Ga0395900_0018811_3906_6803 963
319 3300037466 Ga0395898_0012365 Ga0395898_0012365_5795_8692 963
320 3300037466 Ga0395898_0013569 Ga0395898_0013569_5381_8278 963
321 3300037471 Ga0395905_0000704 Ga0395905_0000704_719_3616 963
322 3300037471 Ga0395905_0000712 Ga0395905_0000712_37400_40315 963
323 3300039437 Ga0436365_0947225 Ga0436365_0947225_453_3383 963
324 3300044684 Ga0466966_0001562 Ga0466966_0001562_10488_13385 963
325 3300048909 Ga0496106_0019164 Ga0496106_0019164_1515_4445 963
326 3300002704 JGI25155J39150_1000090 JGI25155J39150_100009020 964
327 3300002705 JGI25156J39149_1000148 JGI25156J39149_100014820 964
328 3300002738 JGI25154J39366_1000155 JGI25154J39366_100015521 964
329 3300002741 JGI25157J39369_1000183 JGI25157J39369_100018327 964
330 3300002987 JGI25159J45721_1000691 JGI25159J45721_10006918 964
331 3300002987 JGI25159J45721_1003197 JGI25159J45721_10031973 964
332 3300003354 JGI25160J50197_1000059 JGI25160J50197_100005933 964
333 3300003374 JGI25161J50226_1000109 JGI25161J50226_100010922 964
334 3300003771 Ga0055526_1002106 Ga0055526_100210612 964
335 3300003771 Ga0055526_1009100 Ga0055526_10091001 964
336 3300003775 Ga0055524_1000279 Ga0055524_100027916 964
337 3300003781 Ga0055536_1001302 Ga0055536_100130211 964
338 3300003791 Ga0055530_10001255 Ga0055530_100012558 964
339 3300003792 Ga0055540_1000553 Ga0055540_100055311 964
340 3300003794 Ga0055531_10000726 Ga0055531_1000072616 964
341 3300025206 Ga0209435_100014 Ga0209435_100014218 964
342 3300025208 Ga0209436_102041 Ga0209436_1020414 964
343 3300025245 Ga0207425_1004479 Ga0207425_10044792 964
344 3300025246 Ga0209646_1000001 Ga0209646_1000001218 964
345 3300025250 Ga0209026_1000137 Ga0209026_100013772 964
346 3300025256 Ga0209759_1000013 Ga0209759_1000013218 964
347 3300025263 Ga0209565_1000028 Ga0209565_100002882 964
348 3300025263 Ga0209565_1000449 Ga0209565_100044923 964
349 3300025273 Ga0209673_1000035 Ga0209673_1000035253 964
350 3300025284 Ga0209130_1000052 Ga0209130_1000052171 964
351 3300025284 Ga0209130_1000759 Ga0209130_100075916 964
352 3300025291 Ga0209675_1000111 Ga0209675_100011110 964
353 3300025291 Ga0209675_1003000 Ga0209675_10030002 964
354 3300025292 Ga0209676_1000634 Ga0209676_100063439 964
355 3300025294 Ga0209025_1001864 Ga0209025_100186415 964
356 3300025294 Ga0209025_1006211 Ga0209025_10062118 964
357 3300025295 Ga0209564_1000531 Ga0209564_100053111 964
358 3300025295 Ga0209564_1000714 Ga0209564_100071413 964
359 3300025298 Ga0209050_1000023 Ga0209050_1000023520 964
360 3300025299 Ga0209256_1000003 Ga0209256_10000031270 964
361 3300025302 Ga0207426_1000306 Ga0207426_100030664 964
362 3300025302 Ga0207426_1003626 Ga0207426_10036263 964
363 3300025303 Ga0209051_1000017 Ga0209051_1000017520 964
364 3300025304 Ga0209257_1000041 Ga0209257_1000041520 964
365 3300031456 Ga0307513_10000006 Ga0307513_10000006403 964
366 3300031456 Ga0307513_10000011 Ga0307513_1000001176 964

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02347

GDC-P

Glycine cleavage system P-protein

20

451

0.96

PF21478

GcvP2_C

Glycine dehydrogenase, C-terminal domain

791

929

0.88

PF02347

GDC-P

Glycine cleavage system P-protein

460

762

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lgl-assembly1.cif.gz_B crystal structure of glycine decarboxylase p-protein from synechocystis sp. pcc 6803, apo form 0.9474 9 944
4lhc-assembly1.cif.gz_A crystal structure of synechocystis sp. pcc 6803 glycine decarboxylase (p-protein), holo form with pyridoxal-5'-phosphate and glycine 0.9352 9 956
4lhd-assembly1.cif.gz_B crystal structure of synechocystis sp. pcc 6803 glycine decarboxylase (p-protein), holo form with pyridoxal-5'-phosphate and glycine, closed flexible loop 0.9349 9 956
4lhc-assembly1.cif.gz_B crystal structure of synechocystis sp. pcc 6803 glycine decarboxylase (p-protein), holo form with pyridoxal-5'-phosphate and glycine 0.9337 9 956
4lgl-assembly1.cif.gz_B crystal structure of glycine decarboxylase p-protein from synechocystis sp. pcc 6803, apo form 0.9334 9 944
ID Description Score Start End Superfamily
af_K7TIN2_588_818_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9667 528 744 3.40.640.10
af_Q54KM7_558_805_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.962 530 772 3.40.640.10
af_Q54KM7_558_805_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9392 530 772 3.40.640.10
af_P33195_96_355_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9088 101 361 3.40.640.10
af_K7TIN2_588_818_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9051 528 744 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A090QJ70-F1-model_v4 Glycine dehydrogenase (EC 1.4.4.2) 0.9923 561 683 GO:0004375
GO:0005829
GO:0005960
GO:0016594
GO:0019464
GO:0030170
AF-A0A851UV93-F1-model_v4 GCSP dehydrogenase 0.9898 566 663 GO:0004375
GO:0005739
GO:0005960
GO:0016594
GO:0019464
GO:0030170
AF-A0A7X6ELS5-F1-model_v4 deleted 0.9892 603 705
AF-A0A850V804-F1-model_v4 GCSP dehydrogenase 0.9875 566 663 GO:0004375
GO:0005829
GO:0005960
GO:0016594
GO:0019464
GO:0030170
AF-A0A5R8W548-F1-model_v4 Glycine dehydrogenase (Aminomethyl-transferring) (EC 1.4.4.2) 0.9847 557 690 GO:0004375
GO:0005829
GO:0005960
GO:0016594
GO:0019464
GO:0030170

Feature Viewer

pLDDT pTM Quality
80.04 0.85 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map