F423271

General Info

Members Datasets Scaffolds Average Seq Length
364 178 728 263

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100127051|Ga0075431_1001270512
Length 285
Sequence VARFKLTVEYAGTRYSGWQIQKNARTVQGEIDRAVSAVTGRRDFELYGSGRTDAGVHALAQVAHLDVSTNLPPETLLRRINEELPADINILAATIVPHRFHARHDAVARRYLYQIARRRTAFAKPFVWWVKEPLDLQRMRLAANAFVGFKDFQSFAASDDVEADDARGVSGTRSTMVLVDRLEIVDAGELVLVGIEGSHFLWKMVRRIVGVLVEIGRGGLGPAVATTFLSVSSTAPARLTAPASGLFLESVRYKGEARDLPWRAATPLFTGHSSRTPSASRTTSP

Samples

Sample ID Description Type Environment
1 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
114 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
115 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
116 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
120 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
121 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
122 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
123 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
137 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
154 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
175 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.73
Metatranscriptomes 0.27
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.1
Nodule 0
Rhizoplane 3.85
Rhizosphere 94.78
Stem 0
Stem Tuber 0
Unclassified 11.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075431_100127051 3300006847 Bacteria 2631
2 Ga0065712_10076994 3300005290 Bacteria 3566
3 Ga0065715_10002950 3300005293 Bacteria 7746
4 Ga0065715_10092382 3300005293 Bacteria 5150
5 Ga0065715_10105036 3300005293 Bacteria 2919
6 Ga0065715_10122470 3300005293 Bacteria 2204
7 Ga0065715_10134422 3300005293 Bacteria 1955
8 Ga0065715_10135258 3300005293 Bacteria 1941
9 Ga0065707_10085257 3300005295 Bacteria 6311
10 Ga0070683_100003405 3300005329 Bacteria 12898
11 Ga0070670_100012162 3300005331 Bacteria 7363
12 Ga0070670_100202012 3300005331 Unclassified 1727
13 Ga0070666_10023671 3300005335 Unclassified 3998
14 Ga0070680_100124861 3300005336 Bacteria 2150
15 Ga0070660_100047400 3300005339 Bacteria 3298
16 Ga0070691_10084498 3300005341 Unclassified 1558
17 Ga0070692_10319609 3300005345 Unclassified 954
18 Ga0070668_100106660 3300005347 Bacteria 2226
19 Ga0070668_100678604 3300005347 Bacteria 907
20 Ga0070669_100021711 3300005353 Bacteria 4589
21 Ga0070669_100308445 3300005353 Bacteria 1275
22 Ga0070669_100440613 3300005353 Bacteria 1072
23 Ga0070675_100064640 3300005354 Bacteria 3025
24 Ga0070675_100485125 3300005354 Unclassified 1112
25 Ga0070671_100062691 3300005355 Bacteria 3095
26 Ga0070671_100071947 3300005355 Bacteria 2887
27 Ga0070671_100517641 3300005355 Bacteria 1027
28 Ga0070674_100375249 3300005356 Bacteria 1155
29 Ga0070673_100069180 3300005364 Bacteria 2829
30 Ga0070673_100435575 3300005364 Unclassified 1177
31 Ga0070688_100150959 3300005365 Unclassified 1588
32 Ga0070688_100153912 3300005365 Unclassified 1574
33 Ga0070667_100393233 3300005367 Bacteria 1261
34 Ga0070703_10054145 3300005406 Bacteria 1292
35 Ga0070713_100030698 3300005436 Bacteria 4271
36 Ga0070700_100004801 3300005441 Bacteria 7092
37 Ga0070700_100096600 3300005441 Bacteria 1939
38 Ga0070700_100112866 3300005441 Bacteria 1810
39 Ga0070694_100113191 3300005444 Bacteria 1936
40 Ga0070694_100149910 3300005444 Bacteria 1702
41 Ga0070678_100091919 3300005456 Unclassified 2330
42 Ga0070681_10001877 3300005458 Bacteria 18970
43 Ga0070681_10044311 3300005458 Bacteria 4453
44 Ga0068867_100143909 3300005459 Bacteria 1866
45 Ga0068867_100472057 3300005459 Bacteria 1073
46 Ga0070706_100071219 3300005467 Bacteria 3215
47 Ga0070707_100324670 3300005468 Bacteria 1495
48 Ga0070707_100522441 3300005468 Bacteria 1149
49 Ga0070698_100104602 3300005471 Bacteria 2800
50 Ga0070699_100209765 3300005518 Bacteria 1733
51 Ga0070699_100459924 3300005518 Bacteria 1154
52 Ga0070679_100006935 3300005530 Bacteria 10568
53 Ga0070679_100068700 3300005530 Bacteria 3534
54 Ga0070684_100001650 3300005535 Bacteria 16184
55 Ga0070672_100336742 3300005543 Bacteria 1284
56 Ga0070672_100440571 3300005543 Unclassified 1121
57 Ga0070695_100059344 3300005545 Bacteria 2476
58 Ga0070695_100417456 3300005545 Bacteria 1021
59 Ga0070696_100313964 3300005546 Bacteria 1204
60 Ga0070665_100283714 3300005548 Bacteria 1658
61 Ga0070665_100364229 3300005548 Bacteria 1452
62 Ga0070704_100018254 3300005549 Bacteria 4481
63 Ga0070704_100059287 3300005549 Bacteria 2730
64 Ga0068855_100218295 3300005563 Bacteria 2140
65 Ga0070664_100126991 3300005564 Bacteria 2238
66 Ga0068852_100293534 3300005616 Bacteria 1571
67 Ga0068859_100001875 3300005617 Bacteria 21409
68 Ga0068859_100227140 3300005617 Bacteria 1955
69 Ga0068864_100047126 3300005618 Bacteria 3701
70 Ga0068864_100678409 3300005618 Unclassified 1005
71 Ga0068861_100042080 3300005719 Bacteria 3424
72 Ga0068861_100283030 3300005719 Bacteria 1429
73 Ga0068870_10226922 3300005840 Unclassified 1146
74 Ga0068858_100005426 3300005842 Bacteria 12493
75 Ga0068860_100516820 3300005843 Bacteria 1194
76 Ga0068862_100153994 3300005844 Bacteria 2048
77 Ga0068862_100159189 3300005844 Bacteria 2015
78 Ga0075367_10100071 3300006178 Bacteria 1771
79 Ga0068871_100480377 3300006358 Unclassified 1118
80 Ga0075428_100000023 3300006844 Bacteria 127355
81 Ga0075428_100004865 3300006844 Bacteria 14906
82 Ga0075428_100011874 3300006844 Bacteria 9686
83 Ga0075428_100021627 3300006844 Bacteria 7121
84 Ga0075428_100082843 3300006844 Bacteria 3500
85 Ga0075428_100178939 3300006844 Unclassified 2296
86 Ga0075428_100546042 3300006844 Bacteria 1239
87 Ga0075428_100780601 3300006844 Bacteria 1016
88 Ga0075430_100009038 3300006846 Bacteria 8423
89 Ga0075430_100027280 3300006846 Bacteria 4854
90 Ga0075430_100043246 3300006846 Bacteria 3807
91 Ga0075430_100457911 3300006846 Unclassified 1053
92 Ga0075430_100479749 3300006846 Bacteria 1026
93 Ga0075431_100005088 3300006847 Bacteria 12936
94 Ga0075431_100022886 3300006847 Bacteria 6388
95 Ga0075431_100046596 3300006847 Bacteria 4471
96 Ga0075431_100094475 3300006847 Unclassified 3086
97 Ga0075431_100192202 3300006847 Bacteria 2091
98 Ga0075431_100298194 3300006847 Bacteria 1629
99 Ga0075433_10005419 3300006852 Bacteria 10024
100 Ga0075433_10007763 3300006852 Bacteria 8523
101 Ga0075433_10281852 3300006852 Bacteria 1472
102 Ga0075433_10494035 3300006852 Bacteria 1077
103 Ga0075434_100006859 3300006871 Bacteria 10488
104 Ga0075434_100289814 3300006871 Bacteria 1657
105 Ga0075429_100003459 3300006880 Bacteria 13484
106 Ga0075429_100014075 3300006880 Bacteria 6932
107 Ga0075429_100094926 3300006880 Bacteria 2601
108 Ga0075429_100163391 3300006880 Bacteria 1950
109 Ga0075436_100061314 3300006914 Unclassified 2598
110 Ga0075436_100242490 3300006914 Bacteria 1282
111 Ga0097620_100001875 3300006931 Bacteria 21409
112 Ga0097620_100227120 3300006931 Bacteria 1955
113 Ga0075435_100041227 3300007076 Bacteria 3690
114 Ga0075435_100071475 3300007076 Bacteria 2834
115 Ga0105240_10161913 3300009093 Bacteria 2657
116 Ga0111539_10000001 3300009094 Bacteria 1035431
117 Ga0111539_10001050 3300009094 Bacteria 36366
118 Ga0111539_10117444 3300009094 Bacteria 3118
119 Ga0111539_10134181 3300009094 Unclassified 2899
120 Ga0105247_10011179 3300009101 Bacteria 5412
121 Ga0114129_10004280 3300009147 Bacteria 20164
122 Ga0114129_10017547 3300009147 Bacteria 10190
123 Ga0114129_10022149 3300009147 Bacteria 9019
124 Ga0114129_10023920 3300009147 Bacteria 8657
125 Ga0114129_10037027 3300009147 Bacteria 6888
126 Ga0114129_10066943 3300009147 Bacteria 5009
127 Ga0114129_10118659 3300009147 Bacteria 3644
128 Ga0114129_10171829 3300009147 Bacteria 2954
129 Ga0114129_10176668 3300009147 Bacteria 2908
130 Ga0114129_10280994 3300009147 Bacteria 2224
131 Ga0114129_10332343 3300009147 Bacteria 2017
132 Ga0114129_10368730 3300009147 Bacteria 1898
133 Ga0114129_10411515 3300009147 Bacteria 1780
134 Ga0105248_10104200 3300009177 Unclassified 3198
135 Ga0105248_10114508 3300009177 Bacteria 3042
136 Ga0105248_10758684 3300009177 Unclassified 1095
137 Ga0105238_10234780 3300009551 Bacteria 1811
138 Ga0105249_10057701 3300009553 Bacteria 3557
139 Ga0105249_10215191 3300009553 Bacteria 1888
140 Ga0105249_10298204 3300009553 Bacteria 1616
141 Ga0105249_10371258 3300009553 Unclassified 1454
142 Ga0105249_10388824 3300009553 Bacteria 1422
143 Ga0105249_10680267 3300009553 Unclassified 1088
144 Ga0105239_10836445 3300010375 Bacteria 1055
145 Ga0157374_10077863 3300013296 Bacteria 3139
146 Ga0157374_10120661 3300013296 Bacteria 2530
147 Ga0157374_10435363 3300013296 Bacteria 1311
148 Ga0157378_10503531 3300013297 Bacteria 1210
149 Ga0163162_10466317 3300013306 Bacteria 1394
150 Ga0157372_10199702 3300013307 Bacteria 2316
151 Ga0157372_10250488 3300013307 Bacteria 2056
152 Ga0157375_10262354 3300013308 Unclassified 1889
153 Ga0163163_10020071 3300014325 Bacteria 6289
154 Ga0157380_10005677 3300014326 Bacteria 8727
155 Ga0157380_10008421 3300014326 Bacteria 7362
156 Ga0157380_10038564 3300014326 Bacteria 3711
157 Ga0157380_10042543 3300014326 Bacteria 3551
158 Ga0157380_10199217 3300014326 Bacteria 1775
159 Ga0157380_10208500 3300014326 Bacteria 1740
160 Ga0157379_10002554 3300014968 Bacteria 15272
161 Ga0157379_10264318 3300014968 Bacteria 1564
162 Ga0157376_10573453 3300014969 Unclassified 1120
163 Ga0206353_10314146 3300020082 Bacteria 1397
164 Ga0207697_10000685 3300025315 Bacteria 19294
165 Ga0207682_10033337 3300025893 Bacteria 2073
166 Ga0207688_10008481 3300025901 Bacteria 5592
167 Ga0207643_10075972 3300025908 Bacteria 1940
168 Ga0207684_10140310 3300025910 Bacteria 2077
169 Ga0207707_10019217 3300025912 Bacteria 5963
170 Ga0207660_10173578 3300025917 Bacteria 1670
171 Ga0207657_10056105 3300025919 Bacteria 3400
172 Ga0207652_10014997 3300025921 Bacteria 6287
173 Ga0207646_10114629 3300025922 Bacteria 2420
174 Ga0207646_10221061 3300025922 Bacteria 1711
175 Ga0207681_10042987 3300025923 Bacteria 3022
176 Ga0207681_10107470 3300025923 Bacteria 2024
177 Ga0207681_10424929 3300025923 Bacteria 1077
178 Ga0207694_10351295 3300025924 Bacteria 1220
179 Ga0207650_10027301 3300025925 Bacteria 4085
180 Ga0207650_10064186 3300025925 Bacteria 2748
181 Ga0207659_10030683 3300025926 Unclassified 3675
182 Ga0207687_10231012 3300025927 Bacteria 1461
183 Ga0207644_10045303 3300025931 Bacteria 3129
184 Ga0207644_10329077 3300025931 Bacteria 1237
185 Ga0207669_10011091 3300025937 Bacteria 4372
186 Ga0207669_10044657 3300025937 Bacteria 2605
187 Ga0207669_10071679 3300025937 Bacteria 2178
188 Ga0207669_10265393 3300025937 Bacteria 1286
189 Ga0207691_10182905 3300025940 Unclassified 1831
190 Ga0207691_10266041 3300025940 Bacteria 1477
191 Ga0207711_10093382 3300025941 Bacteria 2650
192 Ga0207711_10475152 3300025941 Bacteria 1164
193 Ga0207661_10004259 3300025944 Bacteria 10016
194 Ga0207661_10024177 3300025944 Bacteria 4601
195 Ga0207679_10367121 3300025945 Bacteria 1259
196 Ga0207667_10103630 3300025949 Bacteria 2934
197 Ga0207651_10047486 3300025960 Bacteria 2895
198 Ga0207651_10113677 3300025960 Bacteria 2038
199 Ga0207712_10048371 3300025961 Bacteria 2958
200 Ga0207668_10080043 3300025972 Bacteria 2366
201 Ga0207703_10153294 3300026035 Bacteria 2011
202 Ga0207678_10339202 3300026067 Unclassified 1295
203 Ga0207708_10005291 3300026075 Bacteria 9503
204 Ga0207708_10276271 3300026075 Bacteria 1360
205 Ga0207702_10454855 3300026078 Unclassified 1243
206 Ga0207674_10010280 3300026116 Bacteria 10619
207 Ga0207675_100031806 3300026118 Bacteria 4916
208 Ga0207675_100068773 3300026118 Bacteria 3309
209 Ga0207675_100263889 3300026118 Bacteria 1670
210 Ga0207683_10103608 3300026121 Bacteria 2542
211 Ga0207683_10105539 3300026121 Bacteria 2518
212 Ga0207683_10122653 3300026121 Bacteria 2334
213 Ga0207428_10000002 3300027907 Bacteria 854851
214 Ga0207428_10001901 3300027907 Bacteria 21151
215 Ga0207428_10063632 3300027907 Unclassified 2914
216 Ga0268266_10317582 3300028379 Bacteria 1457
217 Ga0268266_10632760 3300028379 Bacteria 1029
218 Ga0268266_10761273 3300028379 Unclassified 935
219 Ga0307408_100320570 3300031548 Bacteria 1305
220 Ga0307405_10126055 3300031731 Bacteria 1761
221 Ga0307413_10045374 3300031824 Bacteria 2605
222 Ga0307410_10133113 3300031852 Bacteria 1829
223 Ga0307407_10035313 3300031903 Bacteria 2746
224 Ga0307407_10105544 3300031903 Unclassified 1758
225 Ga0307409_100050304 3300031995 Bacteria 3182
226 Ga0307409_100176736 3300031995 Bacteria 1885
227 Ga0307409_100257291 3300031995 Bacteria 1600
228 Ga0307416_100303503 3300032002 Bacteria 1588
229 Ga0307416_100418125 3300032002 Unclassified 1384
230 Ga0307416_101262516 3300032002 Bacteria 844
231 Ga0307411_10088079 3300032005 Bacteria 2158
232 Ga0373937_0368729 3300036401 Bacteria 1361
233 Ga0451835_0407189 3300041492 Bacteria 1138
234 Ga0439450_017869 3300042008 Bacteria 1484
235 Ga0439446_0093269 3300042156 Bacteria 945
236 Ga0439435_0075298 3300042436 Bacteria 1005
237 Ga0439440_0016527 3300042993 Bacteria 1617
238 Ga0453684_0052385 3300044712 Bacteria 5337
239 Ga0453684_0304971 3300044712 Bacteria 1809
240 Ga0466967_0129756 3300045976 Bacteria 2339
241 Ga0495642_0138470 3300046528 Bacteria 1050
242 Ga0495635_0022630 3300046663 Bacteria 4380
243 Ga0495647_0166388 3300046681 Bacteria 953
244 Ga0496100_0187325 3300048903 Bacteria 1500
245 Ga0496104_0001913 3300048907 Bacteria 18049
246 Ga0496105_0013470 3300048908 Bacteria 6492
247 Ga0496106_0109576 3300048909 Bacteria 2149
248 Ga0496106_0241895 3300048909 Unclassified 1442
249 Ga0496108_0008679 3300048911 Bacteria 8240
250 Ga0496109_0225860 3300048912 Bacteria 1761
251 Ga0496110_0019153 3300048913 Bacteria 5754
252 Ga0496110_0256737 3300048913 Bacteria 1591
253 Ga0496111_0204114 3300048914 Bacteria 1469
254 Ga0496112_0015700 3300048915 Bacteria 7073
255 Ga0496112_0023111 3300048915 Bacteria 5935
256 Ga0496112_0306237 3300048915 Bacteria 1534
257 Ga0496114_0538486 3300048917 Bacteria 1032
258 Ga0501034_0125751 3300049571 Bacteria 2549
259 Ga0501036_0348787 3300049572 Bacteria 1236
260 Ga0501036_0586334 3300049572 Bacteria 925
261 Ga0501038_0033141 3300049574 Bacteria 4550
262 Ga0501038_0221838 3300049574 Bacteria 1508
263 Ga0501038_0230322 3300049574 Bacteria 1475
264 Ga0501038_0307529 3300049574 Bacteria 1243
265 Ga0501039_0033316 3300049575 Bacteria 3973
266 Ga0501040_0056029 3300049576 Bacteria 2704
267 Ga0501040_0170240 3300049576 Unclassified 1542
268 Ga0501040_0255217 3300049576 Bacteria 1251
269 Ga0501041_0356672 3300049577 Bacteria 924
270 Ga0501042_0198533 3300049578 Bacteria 1447
271 Ga0501042_0323296 3300049578 Bacteria 1115
272 Ga0501043_0039564 3300049579 Bacteria 3705
273 Ga0501046_0008320 3300049580 Bacteria 9049
274 Ga0501046_0111195 3300049580 Bacteria 2093
275 Ga0501047_0016224 3300049581 Bacteria 7106
276 Ga0501048_0425552 3300049582 Bacteria 950
277 Ga0501068_0010830 3300049584 Bacteria 5131
278 Ga0501070_0009702 3300049586 Bacteria 8140
279 Ga0501071_0061497 3300049587 Bacteria 2720
280 Ga0501071_0070450 3300049587 Unclassified 2547
281 Ga0501071_0091993 3300049587 Bacteria 2229
282 Ga0501072_0040706 3300049588 Bacteria 3649
283 Ga0501072_0086025 3300049588 Bacteria 2495
284 Ga0501072_0118219 3300049588 Bacteria 2112
285 Ga0501072_0186731 3300049588 Bacteria 1653
286 Ga0501073_0029740 3300049589 Bacteria 3904
287 Ga0501073_0100828 3300049589 Bacteria 2005
288 Ga0501073_0123494 3300049589 Bacteria 1794
289 Ga0501074_0162725 3300049590 Bacteria 1594
290 Ga0501074_0302816 3300049590 Unclassified 1135
291 Ga0501075_0014003 3300049591 Bacteria 5741
292 Ga0501075_0171386 3300049591 Bacteria 1656
293 Ga0501076_0032598 3300049592 Bacteria 4067
294 Ga0501076_0112050 3300049592 Bacteria 2206
295 Ga0501076_0129379 3300049592 Bacteria 2047
296 Ga0501079_0053314 3300049741 Bacteria 3120
297 Ga0501079_0068615 3300049741 Unclassified 2737
298 Ga0501079_0227756 3300049741 Bacteria 1456
299 Ga0501079_0608238 3300049741 Bacteria 860
300 Ga0501080_0600216 3300049742 Unclassified 977
301 Ga0501081_0060419 3300049743 Bacteria 2626
302 Ga0501081_0062887 3300049743 Bacteria 2575
303 Ga0501083_0005303 3300049744 Bacteria 9121
304 Ga0501035_0085587 3300049822 Bacteria 2778
305 Ga0501035_0106080 3300049822 Bacteria 2464
306 Ga0501035_0201993 3300049822 Bacteria 1704
307 Ga0501045_0013899 3300049824 Bacteria 5695
308 Ga0501045_0015535 3300049824 Bacteria 5401
309 Ga0501045_0077924 3300049824 Unclassified 2443
310 Ga0501045_0080393 3300049824 Bacteria 2403
311 nmdc:mga06z11_219951_c1 3300050494 Bacteria 1109
312 nmdc:mga06z11_82230_c1 3300050494 Bacteria 1730
313 nmdc:mga05p37_17452_c1 3300050507 Bacteria 8662
314 nmdc:mga05p37_217218_c1 3300050507 Bacteria 2309
315 nmdc:mga05p37_324493_c1 3300050507 Bacteria 1821
316 nmdc:mga05p37_40457_c1 3300050507 Bacteria 5725
317 nmdc:mga05p37_55618_c1 3300050507 Bacteria 4870
318 nmdc:mga05p37_575488_c1 3300050507 Bacteria 1276
319 nmdc:mga05p37_72020_c1 3300050507 Bacteria 4252
320 nmdc:mga05p37_77019_c1 3300050507 Bacteria 4105
321 nmdc:mga05p37_953_c1 3300050507 Bacteria 12723
322 nmdc:mga09592_157211_c1 3300050508 Bacteria 1962
323 nmdc:mga09592_19961_c1 3300050508 Bacteria 5504
324 nmdc:mga09592_414493_c1 3300050508 Bacteria 1164
325 nmdc:mga09592_55765_c1 3300050508 Bacteria 3339
326 nmdc:mga09592_570771_c1 3300050508 Bacteria 971
327 nmdc:mga09592_8511_c1 3300050508 Bacteria 8343
328 nmdc:mga09592_87043_c1 3300050508 Bacteria 2666
329 nmdc:mga0qj67_1927_c1 3300050509 Bacteria 14738
330 nmdc:mga0qj67_352889_c1 3300050509 Bacteria 1189
331 nmdc:mga0qj67_4747_c1 3300050509 Bacteria 3597
332 nmdc:mga06r32_106090_c1 3300050510 Bacteria 2760
333 nmdc:mga06r32_169870_c1 3300050510 Bacteria 2164
334 nmdc:mga06r32_18447_c1 3300050510 Bacteria 6387
335 nmdc:mga06r32_204858_c1 3300050510 Bacteria 1961
336 nmdc:mga06r32_341040_c1 3300050510 Unclassified 1483
337 nmdc:mga06r32_364834_c1 3300050510 Bacteria 1428
338 nmdc:mga06r32_5558_c1 3300050510 Bacteria 11357
339 nmdc:mga06r32_66428_c1 3300050510 Bacteria 3480
340 nmdc:mga08y16_147105_c1 3300050511 Bacteria 2449
341 nmdc:mga08y16_158883_c1 3300050511 Unclassified 2349
342 nmdc:mga08y16_209454_c1 3300050511 Bacteria 2019
343 nmdc:mga08y16_23276_c1 3300050511 Bacteria 6542
344 nmdc:mga08y16_319272_c1 3300050511 Unclassified 1599
345 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
346 nmdc:mga08y16_475486_c1 3300050511 Bacteria 1272
347 nmdc:mga08y16_921_c1 3300050511 Bacteria 28527
348 nmdc:mga0n895_291018_c1 3300050512 Bacteria 1656
349 nmdc:mga0n895_5004_c1 3300050512 Bacteria 10993
350 nmdc:mga0rr50_114333_c1 3300050513 Bacteria 2140
351 nmdc:mga08x19_207567_c1 3300050514 Bacteria 1344
352 nmdc:mga0a205_334335_c1 3300050515 Bacteria 1384
353 Ga0495601_0099354 3300053077 Bacteria 1879
354 Ga0500556_0052759 3300053104 Bacteria 1476
355 Ga0501084_0083177 3300054114 Bacteria 2686
356 Ga0501084_0227714 3300054114 Bacteria 1573
357 Ga0501084_0293225 3300054114 Bacteria 1374
358 Ga0501082_0019595 3300060353 Bacteria 5834
359 Ga0501082_0101595 3300060353 Bacteria 2488
360 Ga0501082_0220716 3300060353 Bacteria 1649
361 Ga0501082_0233118 3300060353 Bacteria 1602
362 Ga0501082_0258048 3300060353 Bacteria 1516
363 Ga0501082_0343585 3300060353 Bacteria 1301
364 Ga0530510_0294574 3300061734 Bacteria 1214
365 Ga0075431_100127051
366 Ga0065712_10076994
367 Ga0065715_10002950
368 Ga0065715_10092382
369 Ga0065715_10105036
370 Ga0065715_10122470
371 Ga0065715_10134422
372 Ga0065715_10135258
373 Ga0065707_10085257
374 Ga0070683_100003405
375 Ga0070670_100012162
376 Ga0070670_100202012
377 Ga0070666_10023671
378 Ga0070680_100124861
379 Ga0070660_100047400
380 Ga0070691_10084498
381 Ga0070692_10319609
382 Ga0070668_100106660
383 Ga0070668_100678604
384 Ga0070669_100021711
385 Ga0070669_100308445
386 Ga0070669_100440613
387 Ga0070675_100064640
388 Ga0070675_100485125
389 Ga0070671_100062691
390 Ga0070671_100071947
391 Ga0070671_100517641
392 Ga0070674_100375249
393 Ga0070673_100069180
394 Ga0070673_100435575
395 Ga0070688_100150959
396 Ga0070688_100153912
397 Ga0070667_100393233
398 Ga0070703_10054145
399 Ga0070713_100030698
400 Ga0070700_100004801
401 Ga0070700_100096600
402 Ga0070700_100112866
403 Ga0070694_100113191
404 Ga0070694_100149910
405 Ga0070678_100091919
406 Ga0070681_10001877
407 Ga0070681_10044311
408 Ga0068867_100143909
409 Ga0068867_100472057
410 Ga0070706_100071219
411 Ga0070707_100324670
412 Ga0070707_100522441
413 Ga0070698_100104602
414 Ga0070699_100209765
415 Ga0070699_100459924
416 Ga0070679_100006935
417 Ga0070679_100068700
418 Ga0070684_100001650
419 Ga0070672_100336742
420 Ga0070672_100440571
421 Ga0070695_100059344
422 Ga0070695_100417456
423 Ga0070696_100313964
424 Ga0070665_100283714
425 Ga0070665_100364229
426 Ga0070704_100018254
427 Ga0070704_100059287
428 Ga0068855_100218295
429 Ga0070664_100126991
430 Ga0068852_100293534
431 Ga0068859_100001875
432 Ga0068859_100227140
433 Ga0068864_100047126
434 Ga0068864_100678409
435 Ga0068861_100042080
436 Ga0068861_100283030
437 Ga0068870_10226922
438 Ga0068858_100005426
439 Ga0068860_100516820
440 Ga0068862_100153994
441 Ga0068862_100159189
442 Ga0075367_10100071
443 Ga0068871_100480377
444 Ga0075428_100000023
445 Ga0075428_100004865
446 Ga0075428_100011874
447 Ga0075428_100021627
448 Ga0075428_100082843
449 Ga0075428_100178939
450 Ga0075428_100546042
451 Ga0075428_100780601
452 Ga0075430_100009038
453 Ga0075430_100027280
454 Ga0075430_100043246
455 Ga0075430_100457911
456 Ga0075430_100479749
457 Ga0075431_100005088
458 Ga0075431_100022886
459 Ga0075431_100046596
460 Ga0075431_100094475
461 Ga0075431_100192202
462 Ga0075431_100298194
463 Ga0075433_10005419
464 Ga0075433_10007763
465 Ga0075433_10281852
466 Ga0075433_10494035
467 Ga0075434_100006859
468 Ga0075434_100289814
469 Ga0075429_100003459
470 Ga0075429_100014075
471 Ga0075429_100094926
472 Ga0075429_100163391
473 Ga0075436_100061314
474 Ga0075436_100242490
475 Ga0097620_100001875
476 Ga0097620_100227120
477 Ga0075435_100041227
478 Ga0075435_100071475
479 Ga0105240_10161913
480 Ga0111539_10000001
481 Ga0111539_10001050
482 Ga0111539_10117444
483 Ga0111539_10134181
484 Ga0105247_10011179
485 Ga0114129_10004280
486 Ga0114129_10017547
487 Ga0114129_10022149
488 Ga0114129_10023920
489 Ga0114129_10037027
490 Ga0114129_10066943
491 Ga0114129_10118659
492 Ga0114129_10171829
493 Ga0114129_10176668
494 Ga0114129_10280994
495 Ga0114129_10332343
496 Ga0114129_10368730
497 Ga0114129_10411515
498 Ga0105248_10104200
499 Ga0105248_10114508
500 Ga0105248_10758684
501 Ga0105238_10234780
502 Ga0105249_10057701
503 Ga0105249_10215191
504 Ga0105249_10298204
505 Ga0105249_10371258
506 Ga0105249_10388824
507 Ga0105249_10680267
508 Ga0105239_10836445
509 Ga0157374_10077863
510 Ga0157374_10120661
511 Ga0157374_10435363
512 Ga0157378_10503531
513 Ga0163162_10466317
514 Ga0157372_10199702
515 Ga0157372_10250488
516 Ga0157375_10262354
517 Ga0163163_10020071
518 Ga0157380_10005677
519 Ga0157380_10008421
520 Ga0157380_10038564
521 Ga0157380_10042543
522 Ga0157380_10199217
523 Ga0157380_10208500
524 Ga0157379_10002554
525 Ga0157379_10264318
526 Ga0157376_10573453
527 Ga0206353_10314146
528 Ga0207697_10000685
529 Ga0207682_10033337
530 Ga0207688_10008481
531 Ga0207643_10075972
532 Ga0207684_10140310
533 Ga0207707_10019217
534 Ga0207660_10173578
535 Ga0207657_10056105
536 Ga0207652_10014997
537 Ga0207646_10114629
538 Ga0207646_10221061
539 Ga0207681_10042987
540 Ga0207681_10107470
541 Ga0207681_10424929
542 Ga0207694_10351295
543 Ga0207650_10027301
544 Ga0207650_10064186
545 Ga0207659_10030683
546 Ga0207687_10231012
547 Ga0207644_10045303
548 Ga0207644_10329077
549 Ga0207669_10011091
550 Ga0207669_10044657
551 Ga0207669_10071679
552 Ga0207669_10265393
553 Ga0207691_10182905
554 Ga0207691_10266041
555 Ga0207711_10093382
556 Ga0207711_10475152
557 Ga0207661_10004259
558 Ga0207661_10024177
559 Ga0207679_10367121
560 Ga0207667_10103630
561 Ga0207651_10047486
562 Ga0207651_10113677
563 Ga0207712_10048371
564 Ga0207668_10080043
565 Ga0207703_10153294
566 Ga0207678_10339202
567 Ga0207708_10005291
568 Ga0207708_10276271
569 Ga0207702_10454855
570 Ga0207674_10010280
571 Ga0207675_100031806
572 Ga0207675_100068773
573 Ga0207675_100263889
574 Ga0207683_10103608
575 Ga0207683_10105539
576 Ga0207683_10122653
577 Ga0207428_10000002
578 Ga0207428_10001901
579 Ga0207428_10063632
580 Ga0268266_10317582
581 Ga0268266_10632760
582 Ga0268266_10761273
583 Ga0307408_100320570
584 Ga0307405_10126055
585 Ga0307413_10045374
586 Ga0307410_10133113
587 Ga0307407_10035313
588 Ga0307407_10105544
589 Ga0307409_100050304
590 Ga0307409_100176736
591 Ga0307409_100257291
592 Ga0307416_100303503
593 Ga0307416_100418125
594 Ga0307416_101262516
595 Ga0307411_10088079
596 Ga0373937_0368729
597 Ga0451835_0407189
598 Ga0439450_017869
599 Ga0439446_0093269
600 Ga0439435_0075298
601 Ga0439440_0016527
602 Ga0453684_0052385
603 Ga0453684_0304971
604 Ga0466967_0129756
605 Ga0495642_0138470
606 Ga0495635_0022630
607 Ga0495647_0166388
608 Ga0496100_0187325
609 Ga0496104_0001913
610 Ga0496105_0013470
611 Ga0496106_0109576
612 Ga0496106_0241895
613 Ga0496108_0008679
614 Ga0496109_0225860
615 Ga0496110_0019153
616 Ga0496110_0256737
617 Ga0496111_0204114
618 Ga0496112_0015700
619 Ga0496112_0023111
620 Ga0496112_0306237
621 Ga0496114_0538486
622 Ga0501034_0125751
623 Ga0501036_0348787
624 Ga0501036_0586334
625 Ga0501038_0033141
626 Ga0501038_0221838
627 Ga0501038_0230322
628 Ga0501038_0307529
629 Ga0501039_0033316
630 Ga0501040_0056029
631 Ga0501040_0170240
632 Ga0501040_0255217
633 Ga0501041_0356672
634 Ga0501042_0198533
635 Ga0501042_0323296
636 Ga0501043_0039564
637 Ga0501046_0008320
638 Ga0501046_0111195
639 Ga0501047_0016224
640 Ga0501048_0425552
641 Ga0501068_0010830
642 Ga0501070_0009702
643 Ga0501071_0061497
644 Ga0501071_0070450
645 Ga0501071_0091993
646 Ga0501072_0040706
647 Ga0501072_0086025
648 Ga0501072_0118219
649 Ga0501072_0186731
650 Ga0501073_0029740
651 Ga0501073_0100828
652 Ga0501073_0123494
653 Ga0501074_0162725
654 Ga0501074_0302816
655 Ga0501075_0014003
656 Ga0501075_0171386
657 Ga0501076_0032598
658 Ga0501076_0112050
659 Ga0501076_0129379
660 Ga0501079_0053314
661 Ga0501079_0068615
662 Ga0501079_0227756
663 Ga0501079_0608238
664 Ga0501080_0600216
665 Ga0501081_0060419
666 Ga0501081_0062887
667 Ga0501083_0005303
668 Ga0501035_0085587
669 Ga0501035_0106080
670 Ga0501035_0201993
671 Ga0501045_0013899
672 Ga0501045_0015535
673 Ga0501045_0077924
674 Ga0501045_0080393
675 nmdc:mga06z11_219951_c1
676 nmdc:mga06z11_82230_c1
677 nmdc:mga05p37_17452_c1
678 nmdc:mga05p37_217218_c1
679 nmdc:mga05p37_324493_c1
680 nmdc:mga05p37_40457_c1
681 nmdc:mga05p37_55618_c1
682 nmdc:mga05p37_575488_c1
683 nmdc:mga05p37_72020_c1
684 nmdc:mga05p37_77019_c1
685 nmdc:mga05p37_953_c1
686 nmdc:mga09592_157211_c1
687 nmdc:mga09592_19961_c1
688 nmdc:mga09592_414493_c1
689 nmdc:mga09592_55765_c1
690 nmdc:mga09592_570771_c1
691 nmdc:mga09592_8511_c1
692 nmdc:mga09592_87043_c1
693 nmdc:mga0qj67_1927_c1
694 nmdc:mga0qj67_352889_c1
695 nmdc:mga0qj67_4747_c1
696 nmdc:mga06r32_106090_c1
697 nmdc:mga06r32_169870_c1
698 nmdc:mga06r32_18447_c1
699 nmdc:mga06r32_204858_c1
700 nmdc:mga06r32_341040_c1
701 nmdc:mga06r32_364834_c1
702 nmdc:mga06r32_5558_c1
703 nmdc:mga06r32_66428_c1
704 nmdc:mga08y16_147105_c1
705 nmdc:mga08y16_158883_c1
706 nmdc:mga08y16_209454_c1
707 nmdc:mga08y16_23276_c1
708 nmdc:mga08y16_319272_c1
709 nmdc:mga08y16_3_c1
710 nmdc:mga08y16_475486_c1
711 nmdc:mga08y16_921_c1
712 nmdc:mga0n895_291018_c1
713 nmdc:mga0n895_5004_c1
714 nmdc:mga0rr50_114333_c1
715 nmdc:mga08x19_207567_c1
716 nmdc:mga0a205_334335_c1
717 Ga0495601_0099354
718 Ga0500556_0052759
719 Ga0501084_0083177
720 Ga0501084_0227714
721 Ga0501084_0293225
722 Ga0501082_0019595
723 Ga0501082_0101595
724 Ga0501082_0220716
725 Ga0501082_0233118
726 Ga0501082_0258048
727 Ga0501082_0343585
728 Ga0530510_0294574

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01416

PseudoU_synth_1

tRNA pseudouridine synthase

6

105

0.94

PF01416

PseudoU_synth_1

tRNA pseudouridine synthase

142

254

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nr0-assembly1.cif.gz_B crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.9382 2 246
8q70-assembly1.cif.gz_A-2 trna pseudouridine synthase a homodimer 0.9143 3 246
1vs3-assembly1.cif.gz_B crystal structure of the trna pseudouridine synthase trua from thermus thermophilus hb8 0.8953 1 247
2nre-assembly1.cif.gz_A-2 crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.8943 2 259
2nr0-assembly1.cif.gz_B crystal structure of pseudoudirinde synthase trua in complex with leucyl trna 0.8859 2 246
ID Description Score Start End Superfamily
2nqpB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9644 2 106 3.30.70.580
af_C7J2E5_59_129_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9587 3 65 3.30.70.580
af_Q2FW37_1_104_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9568 3 105 3.30.70.580
af_A0A0R0F7R0_40_148_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9491 1 106 3.30.70.580
af_O74451_30_149_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.939 2 102 3.30.70.580
ID Description Score Start End GO Terms
AF-A0A2V7Z9L7-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9976 5 129 GO:0003723
GO:0031119
GO:0160147
AF-A0A3N6AX78-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9882 2 105 GO:0003723
GO:0031119
GO:0160147
AF-A0A533YIS0-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9859 1 106 GO:0003723
GO:0031119
GO:0160147
AF-X1RMX3-F1-model_v4 Pseudouridine synthase I TruA alpha/beta domain-containing protein 0.9849 2 106 GO:0003723
GO:0009982
GO:0031119
AF-A0A2V8TCU5-F1-model_v4 tRNA pseudouridine synthase (EC 5.4.99.12) 0.9842 1 118 GO:0003723
GO:0031119
GO:0160147

Map