F423157

General Info

Members Datasets Scaffolds Average Seq Length
363 216 328 825

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2946787523|2946790328
Length 889
Sequence FNALKADAAWQKVWDERKTFAADDLSTKPRSYVLEMFPYPSGRIHMGHVRNYTMGDVLARFRRMKGMEVLHPMGWDAFGMPAENAAMEKGVHPGNWTRANIATMKAQLKRLGFALDWTRELATCEPEYYGHEQALFLDLFAAGLVYRKESAVNWDPVDMTVLANEQVIDGRGWRSGALVERRKLSQWFLKITDFADELVDGLGALEHWPDKVKLMQENWIGRSQGLQFKFQLTAPFPLAGGVGGGPDTNATVAIGGASPPLTPPASGRGIESVEVFTTRPDTMFGSSFVAVAADHPIARAIAETNPDAAAFIELCKRGGTTAAELDTQEKLGFDTGIRAVHPLDKTWHLPVYIANFVLMEYGTGAVFGVPAHDQRDLDFARKYDLPVKRVVSEGDDEAPVFVGDTAWTGAGSLVNSHFLDGMDIEDAKRTVIERAEGEGWGKGTTVFRLRDWGVSRQRYWGTPIPIIHCDACGAVPVPKDQLPIVLPEDVSFDIPGNPLDRHPTWKHVPCPSCGGDARRETDTLDTFVDSSWYFIRFASQPDAKPFDRAGAEKWLPVNQYIGGVEHAILHLLYARFWTRALKHIGMLDIAEPFAGLFTQGMVTHETYSRGDAGDTQPEIDTDEDDSSDAPVKTKWLSPDEVRKIDAGYIEIATGGPVTVGRVTKMSKSKKNTVDPEPIVDQYGADAVRWFVLSDSPPERDLPWSESGIEGAWRFVQRLWRLIESDDAAKAEGDDVALRKLCHRTTVGIESDINALQFNKAVARLYSLCTAIEKAPPSADREQGVRTLLLLVSPMVPHVAEEAWATAGNDGLIADAAWPIVDPAMLVDDEVTIAVQVNGKLRDTLVFAKGAPKDEVEAAALASEKIVRLLEGNPPRKVIVVPDRLVNIVA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
3 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
4 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
5 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
6 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
7 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
8 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
9 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
10 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
11 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
12 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
13 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
14 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
15 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
16 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
17 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
18 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
19 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
20 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
21 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
22 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
23 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
24 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
25 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
26 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
27 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
28 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
29 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
30 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
31 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
32 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
33 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
34 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
35 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
36 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
37 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
38 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
39 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
40 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
41 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
44 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
45 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
46 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
47 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
48 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
49 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
52 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
53 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
54 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
55 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
56 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
57 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
58 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
59 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
60 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
61 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
62 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
63 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
64 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
65 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
66 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
67 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
68 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
69 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
70 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
71 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
72 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
73 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
74 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
75 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
76 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
77 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
78 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
79 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
80 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
81 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
82 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
83 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
84 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
85 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
86 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
87 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
88 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
91 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
93 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
98 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
99 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
137 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
141 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
142 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
143 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
144 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
145 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
146 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
149 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
150 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
151 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
152 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
153 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
154 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
155 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
156 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
157 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
158 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
159 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
160 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
161 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
162 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
163 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
164 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
165 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
166 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
167 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
168 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
169 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
170 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
171 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
172 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
173 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
174 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
175 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
176 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
177 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
178 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
179 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
180 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
181 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
182 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
183 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
184 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
185 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
186 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
187 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
188 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
189 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
190 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
191 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
192 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
193 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
194 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
195 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
196 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
197 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
198 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
199 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
200 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
201 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
202 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
203 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
204 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
205 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
206 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
207 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
208 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
209 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
210 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
211 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
212 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
213 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
214 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
215 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
216 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.36
Metatranscriptomes 0
Isolates 9.64

Biome Distribution

Category Percentage (%)
Aerial Root 0.55
Bulb 0
Endosphere 14.33
Nodule 0
Rhizoplane 3.86
Rhizosphere 66.94
Stem 0
Stem Tuber 0
Unclassified 14.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3239060 2162886007 Bacteria 10171
2 SwRhRL2b_contig_3705370 2162886007 Bacteria 36853
3 JGI24737J22298_10004013 3300001990 Bacteria 5146
4 JGI24749J21850_1000157 3300002076 Bacteria 10897
5 JGI24751J29686_10000414 3300002459 Bacteria 13492
6 JGI25150J39212_1000067 3300002774 Bacteria 63491
7 JGI25165J46597_1000010 3300003214 Bacteria 442113
8 JGI25153J46596_10000125 3300003215 Bacteria 86065
9 JGI25153J46596_10000182 3300003215 Bacteria 62045
10 Ga0055525_1000118 3300003759 Bacteria 120652
11 Ga0055542_1000076 3300003762 Bacteria 139662
12 Ga0055529_1000004 3300003763 Bacteria 433331
13 Ga0055537_1000852 3300003773 Bacteria 14838
14 Ga0055524_1000387 3300003775 Bacteria 37906
15 Ga0055536_1005046 3300003781 Bacteria 6557
16 Ga0055530_10001385 3300003791 Bacteria 17950
17 Ga0055540_1001895 3300003792 Bacteria 11716
18 Ga0065165_1001249 3300005262 Bacteria 28853
19 Ga0065704_10000367 3300005289 Bacteria 42610
20 Ga0065704_10070189 3300005289 Bacteria 114786
21 Ga0065707_10081714 3300005295 Bacteria 75872
22 Ga0065707_10087660 3300005295 Bacteria 4937
23 Ga0070658_10001294 3300005327 Bacteria 21356
24 Ga0070658_10003990 3300005327 Bacteria 12100
25 Ga0070670_100000158 3300005331 Bacteria 62049
26 Ga0070670_100001577 3300005331 Bacteria 18383
27 Ga0070677_10000160 3300005333 Bacteria 22947
28 Ga0068868_100000032 3300005338 Bacteria 75803
29 Ga0070660_100003184 3300005339 Bacteria 11277
30 Ga0070668_100000001 3300005347 Bacteria 275905
31 Ga0070668_100000007 3300005347 Bacteria 150621
32 Ga0070669_100000012 3300005353 Bacteria 211302
33 Ga0070669_100000031 3300005353 Bacteria 154042
34 Ga0070669_100000068 3300005353 Bacteria 103282
35 Ga0070669_100020675 3300005353 Bacteria 4702
36 Ga0070671_100000019 3300005355 Bacteria 132341
37 Ga0070671_100000046 3300005355 Bacteria 84967
38 Ga0070671_100000777 3300005355 Bacteria 22924
39 Ga0070671_100003286 3300005355 Bacteria 12614
40 Ga0070674_100049614 3300005356 Bacteria 2886
41 Ga0070659_100000005 3300005366 Bacteria 259902
42 Ga0070667_100000006 3300005367 Bacteria 336732
43 Ga0070667_100000066 3300005367 Bacteria 134529
44 Ga0070667_100000885 3300005367 Bacteria 27676
45 Ga0070667_100002591 3300005367 Bacteria 15709
46 Ga0070678_100057052 3300005456 Bacteria 2859
47 Ga0070665_100000043 3300005548 Bacteria 279774
48 Ga0070665_100007146 3300005548 Bacteria 11354
49 Ga0070664_100008513 3300005564 Bacteria 8294
50 Ga0068854_100000219 3300005578 Bacteria 38639
51 Ga0068854_100003588 3300005578 Bacteria 9704
52 Ga0068856_100041997 3300005614 Bacteria 4497
53 Ga0068852_100000061 3300005616 Bacteria 73079
54 Ga0068852_100064738 3300005616 Bacteria 3188
55 Ga0068859_100000692 3300005617 Bacteria 33827
56 Ga0068859_100007304 3300005617 Bacteria 11207
57 Ga0068864_100000123 3300005618 Bacteria 75407
58 Ga0068864_100000145 3300005618 Bacteria 68040
59 Ga0068864_100002101 3300005618 Bacteria 16467
60 Ga0068864_100004984 3300005618 Bacteria 10880
61 Ga0068864_100014245 3300005618 Bacteria 6603
62 Ga0068863_100000027 3300005841 Bacteria 181884
63 Ga0068863_100007065 3300005841 Bacteria 11003
64 Ga0068863_100089528 3300005841 Bacteria 2918
65 Ga0068858_100000268 3300005842 Bacteria 55747
66 Ga0068858_100000348 3300005842 Bacteria 48656
67 Ga0068858_100000803 3300005842 Bacteria 32914
68 Ga0068858_100000951 3300005842 Bacteria 29938
69 Ga0068858_100005115 3300005842 Bacteria 12856
70 Ga0068860_100000013 3300005843 Bacteria 323055
71 Ga0068860_100000074 3300005843 Bacteria 173022
72 Ga0068860_100000391 3300005843 Bacteria 57332
73 Ga0068860_100014304 3300005843 Bacteria 7781
74 Ga0068860_100016780 3300005843 Bacteria 7138
75 Ga0068862_100000014 3300005844 Bacteria 251552
76 Ga0068862_100000043 3300005844 Bacteria 164356
77 Ga0081539_10026719 3300005985 Bacteria 3673
78 Ga0075370_10002265 3300006353 Bacteria 8862
79 Ga0097620_100000692 3300006931 Bacteria 33827
80 Ga0097620_100007304 3300006931 Bacteria 11207
81 Ga0105247_10002696 3300009101 Bacteria 11920
82 Ga0105243_10000490 3300009148 Bacteria 40402
83 Ga0105241_10001573 3300009174 Bacteria 17473
84 Ga0105248_10002631 3300009177 Bacteria 19969
85 Ga0105248_10029324 3300009177 Bacteria 6138
86 Ga0105248_10096771 3300009177 Bacteria 3325
87 Ga0105237_10032356 3300009545 Bacteria 5295
88 Ga0105237_10051502 3300009545 Bacteria 4135
89 Ga0105249_10000002 3300009553 Bacteria 376207
90 Ga0105249_10002539 3300009553 Bacteria 15800
91 Ga0157371_10000062 3300013102 Bacteria 169669
92 Ga0163162_10007635 3300013306 Bacteria 10535
93 Ga0163162_10038321 3300013306 Bacteria 4783
94 Ga0163162_10042787 3300013306 Bacteria 4534
95 Ga0157380_10000040 3300014326 Bacteria 76401
96 Ga0157380_10000292 3300014326 Bacteria 30110
97 Ga0157379_10008156 3300014968 Bacteria 9096
98 Ga0209674_102414 3300025226 Bacteria 4032
99 Ga0209563_100070 3300025230 Bacteria 249779
100 Ga0207425_1000005 3300025245 Bacteria 900502
101 Ga0209148_1000008 3300025254 Bacteria 1504371
102 Ga0209233_1000044 3300025261 Bacteria 489783
103 Ga0209565_1000029 3300025263 Bacteria 340335
104 Ga0209565_1000052 3300025263 Bacteria 212056
105 Ga0209455_1000002 3300025272 Bacteria 1505459
106 Ga0209673_1002174 3300025273 Bacteria 14467
107 Ga0209675_1009359 3300025291 Bacteria 3471
108 Ga0209025_1001007 3300025294 Bacteria 41722
109 Ga0209758_1000002 3300025297 Bacteria 1400310
110 Ga0209758_1000007 3300025297 Bacteria 1270410
111 Ga0209758_1008954 3300025297 Bacteria 6342
112 Ga0209050_1000001 3300025298 Bacteria 3563507
113 Ga0209050_1000167 3300025298 Bacteria 151608
114 Ga0209050_1000267 3300025298 Bacteria 111656
115 Ga0209256_1000008 3300025299 Bacteria 975723
116 Ga0209051_1000472 3300025303 Bacteria 52350
117 Ga0209257_1000028 3300025304 Bacteria 699493
118 Ga0209257_1004326 3300025304 Bacteria 11126
119 Ga0207697_10000003 3300025315 Bacteria 90538
120 Ga0207680_10000144 3300025903 Bacteria 34034
121 Ga0207647_10014489 3300025904 Bacteria 5434
122 Ga0207705_10000007 3300025909 Bacteria 597387
123 Ga0207705_10000350 3300025909 Bacteria 41599
124 Ga0207654_10000226 3300025911 Bacteria 34521
125 Ga0207695_10001898 3300025913 Bacteria 32616
126 Ga0207671_10000924 3300025914 Bacteria 36861
127 Ga0207671_10002056 3300025914 Bacteria 22074
128 Ga0207657_10001518 3300025919 Bacteria 24871
129 Ga0207657_10028704 3300025919 Bacteria 5071
130 Ga0207649_10007145 3300025920 Bacteria 6068
131 Ga0207681_10000004 3300025923 Bacteria 559005
132 Ga0207681_10000014 3300025923 Bacteria 353422
133 Ga0207681_10000105 3300025923 Bacteria 71882
134 Ga0207681_10004717 3300025923 Bacteria 8387
135 Ga0207694_10023969 3300025924 Bacteria 4635
136 Ga0207650_10000015 3300025925 Bacteria 369173
137 Ga0207687_10003478 3300025927 Bacteria 10598
138 Ga0207644_10000031 3300025931 Bacteria 134402
139 Ga0207644_10000111 3300025931 Bacteria 60737
140 Ga0207644_10001037 3300025931 Bacteria 17807
141 Ga0207644_10001155 3300025931 Bacteria 16926
142 Ga0207690_10000020 3300025932 Bacteria 218439
143 Ga0207690_10010598 3300025932 Bacteria 5487
144 Ga0207709_10000005 3300025935 Bacteria 806813
145 Ga0207669_10002226 3300025937 Bacteria 8245
146 Ga0207669_10009416 3300025937 Bacteria 4650
147 Ga0207711_10001014 3300025941 Bacteria 26941
148 Ga0207711_10004397 3300025941 Bacteria 12012
149 Ga0207711_10008027 3300025941 Bacteria 8834
150 Ga0207711_10016513 3300025941 Bacteria 6132
151 Ga0207711_10028465 3300025941 Bacteria 4702
152 Ga0207711_10034784 3300025941 Bacteria 4267
153 Ga0207667_10000001 3300025949 Bacteria 1178522
154 Ga0207667_10114274 3300025949 Bacteria 2783
155 Ga0207712_10000002 3300025961 Bacteria 706628
156 Ga0207668_10000009 3300025972 Bacteria 188071
157 Ga0207668_10000054 3300025972 Bacteria 95426
158 Ga0207668_10003237 3300025972 Bacteria 9543
159 Ga0207668_10005103 3300025972 Bacteria 7727
160 Ga0207668_10016203 3300025972 Bacteria 4646
161 Ga0207640_10000750 3300025981 Bacteria 18608
162 Ga0207640_10003971 3300025981 Bacteria 7981
163 Ga0207658_10000010 3300025986 Bacteria 240224
164 Ga0207658_10000132 3300025986 Bacteria 80078
165 Ga0207658_10000205 3300025986 Bacteria 61647
166 Ga0207658_10005537 3300025986 Bacteria 8654
167 Ga0207658_10046601 3300025986 Bacteria 3167
168 Ga0207677_10000100 3300026023 Bacteria 70908
169 Ga0207703_10000139 3300026035 Bacteria 86495
170 Ga0207703_10001170 3300026035 Bacteria 24778
171 Ga0207703_10004103 3300026035 Bacteria 12024
172 Ga0207703_10018441 3300026035 Bacteria 5449
173 Ga0207703_10054701 3300026035 Bacteria 3246
174 Ga0207678_10009153 3300026067 Bacteria 8718
175 Ga0207702_10000862 3300026078 Bacteria 31638
176 Ga0207702_10001794 3300026078 Bacteria 21134
177 Ga0207641_10000045 3300026088 Bacteria 181882
178 Ga0207641_10000584 3300026088 Bacteria 40125
179 Ga0207641_10006380 3300026088 Bacteria 9949
180 Ga0207641_10024521 3300026088 Bacteria 4972
181 Ga0207641_10043774 3300026088 Bacteria 3762
182 Ga0207676_10000021 3300026095 Bacteria 296572
183 Ga0207676_10000072 3300026095 Bacteria 101978
184 Ga0207676_10006990 3300026095 Bacteria 8000
185 Ga0207674_10005210 3300026116 Bacteria 15476
186 Ga0207674_10008623 3300026116 Bacteria 11753
187 Ga0207674_10043649 3300026116 Bacteria 4622
188 Ga0207675_100006332 3300026118 Bacteria 11222
189 Ga0207683_10031481 3300026121 Bacteria 4604
190 Ga0207698_10000156 3300026142 Bacteria 43632
191 Ga0209813_10000029 3300027866 Bacteria 68229
192 Ga0268266_10000002 3300028379 Bacteria 3059047
193 Ga0268266_10004774 3300028379 Bacteria 12886
194 Ga0268265_10000013 3300028380 Bacteria 341536
195 Ga0268265_10000048 3300028380 Bacteria 178523
196 Ga0268265_10000803 3300028380 Bacteria 29861
197 Ga0268264_10000039 3300028381 Bacteria 376641
198 Ga0268264_10000070 3300028381 Bacteria 268524
199 Ga0268264_10000439 3300028381 Bacteria 57339
200 Ga0268264_10000541 3300028381 Bacteria 47736
201 Ga0268264_10029692 3300028381 Bacteria 4481
202 Ga0307517_10007395 3300028786 Bacteria 16018
203 Ga0307508_10000011 3300031616 Bacteria 248001
204 Ga0307407_10005479 3300031903 Bacteria 5512
205 Ga0307412_10000414 3300031911 Bacteria 26068
206 Ga0307412_10001373 3300031911 Bacteria 13518
207 Ga0307412_10021885 3300031911 Bacteria 3911
208 Ga0307415_100033466 3300032126 Bacteria 3337
209 Ga0307510_10006144 3300033180 Bacteria 14310
210 Ga0395905_0052528 3300037471 Bacteria 3815
211 Ga0451576_0000017 3300045051 Bacteria 558261
212 Ga0495627_000171 3300046453 Bacteria 74013
213 Ga0495627_000427 3300046453 Bacteria 36547
214 Ga0495627_000609 3300046453 Bacteria 28508
215 Ga0495638_0002459 3300046460 Bacteria 15100
216 Ga0495638_0025153 3300046460 Bacteria 3874
217 Ga0495650_0000995 3300046471 Bacteria 32148
218 Ga0495650_0005318 3300046471 Bacteria 8410
219 Ga0495596_0002029 3300046500 Bacteria 11136
220 Ga0495596_0006891 3300046500 Bacteria 5178
221 Ga0495583_0000212 3300046506 Bacteria 97784
222 Ga0495583_0003196 3300046506 Bacteria 12849
223 Ga0495583_0020285 3300046506 Bacteria 3448
224 Ga0495583_0037303 3300046506 Bacteria 2304
225 Ga0495606_0001035 3300046507 Bacteria 40279
226 Ga0495606_0002116 3300046507 Bacteria 24110
227 Ga0495610_0000199 3300046512 Bacteria 67146
228 Ga0495610_0000418 3300046512 Bacteria 43639
229 Ga0495632_0000070 3300046519 Bacteria 107264
230 Ga0495632_0000732 3300046519 Bacteria 29661
231 Ga0495637_0000728 3300046520 Bacteria 22468
232 Ga0495643_0000010 3300046522 Bacteria 341431
233 Ga0495643_0000126 3300046522 Bacteria 123807
234 Ga0495648_0000323 3300046524 Bacteria 53106
235 Ga0495648_0033033 3300046524 Bacteria 3386
236 Ga0495663_0000004 3300046525 Bacteria 355166
237 Ga0495663_0000805 3300046525 Bacteria 10709
238 Ga0495633_0000105 3300046558 Bacteria 113385
239 Ga0495633_0000243 3300046558 Bacteria 66073
240 Ga0495633_0001669 3300046558 Bacteria 16753
241 Ga0495668_0000059 3300046616 Bacteria 194951
242 Ga0495668_0010340 3300046616 Bacteria 5652
243 Ga0495625_0000094 3300046660 Bacteria 144517
244 Ga0495625_0013255 3300046660 Bacteria 6632
245 Ga0495625_0013999 3300046660 Bacteria 6424
246 Ga0495669_0000509 3300046684 Bacteria 17674
247 Ga0495670_0000016 3300046691 Bacteria 128045
248 Ga0495671_0000014 3300046692 Bacteria 341431
249 Ga0495600_0003009 3300046809 Bacteria 9838
250 Ga0495683_0012474 3300047323 Bacteria 4459
251 Ga0495687_000152 3300047443 Bacteria 105602
252 Ga0495687_001774 3300047443 Bacteria 19035
253 Ga0495677_0000822 3300047445 Bacteria 12540
254 Ga0495681_0000038 3300047470 Bacteria 121100
255 Ga0495681_0000153 3300047470 Bacteria 57842
256 Ga0495681_0001063 3300047470 Bacteria 20955
257 Ga0495615_0000077 3300048090 Bacteria 30161
258 Ga0495626_0000255 3300048091 Bacteria 61151
259 Ga0496102_0000010 3300048905 Bacteria 324617
260 Ga0496102_0000497 3300048905 Bacteria 43250
261 Ga0496102_0002820 3300048905 Bacteria 14794
262 Ga0496103_0000029 3300048906 Bacteria 213326
263 Ga0496103_0000205 3300048906 Bacteria 59075
264 Ga0496103_0000289 3300048906 Bacteria 47033
265 Ga0496104_0000161 3300048907 Bacteria 60841
266 Ga0496105_0001212 3300048908 Bacteria 17983
267 Ga0496105_0019273 3300048908 Bacteria 5502
268 Ga0496108_0002988 3300048911 Bacteria 13589
269 Ga0496114_0000016 3300048917 Bacteria 274656
270 Ga0496115_0000197 3300048918 Bacteria 56313
271 Ga0496115_0001166 3300048918 Bacteria 18830
272 Ga0496116_0000045 3300048919 Bacteria 324307
273 Ga0496117_0000037 3300048920 Bacteria 324960
274 Ga0496117_0000628 3300048920 Bacteria 57204
275 Ga0496117_0019670 3300048920 Bacteria 5534
276 Ga0496118_0000034 3300048921 Bacteria 322764
277 Ga0496118_0000154 3300048921 Bacteria 122224
278 Ga0496118_0021591 3300048921 Bacteria 5660
279 Ga0496118_0024182 3300048921 Bacteria 5251
280 Ga0496119_0000734 3300048922 Bacteria 44175
281 Ga0496120_0023951 3300048923 Bacteria 3813
282 Ga0496121_0000024 3300048924 Bacteria 462959
283 Ga0496121_0000190 3300048924 Bacteria 136607
284 Ga0496121_0000276 3300048924 Bacteria 107058
285 Ga0496121_0000441 3300048924 Bacteria 82090
286 Ga0496121_0000986 3300048924 Bacteria 50999
287 Ga0496121_0016344 3300048924 Bacteria 7668
288 Ga0496123_0002896 3300048926 Bacteria 20095
289 Ga0496123_0006076 3300048926 Bacteria 11848
290 Ga0496123_0011072 3300048926 Bacteria 7872
291 Ga0496124_0000033 3300048927 Bacteria 330586
292 Ga0496124_0000655 3300048927 Bacteria 57195
293 Ga0496124_0000675 3300048927 Bacteria 56113
294 Ga0496124_0006526 3300048927 Bacteria 12690
295 Ga0496124_0008603 3300048927 Bacteria 10645
296 Ga0496124_0039792 3300048927 Bacteria 4071
297 Ga0496125_0001514 3300048928 Bacteria 33291
298 Ga0496125_0002988 3300048928 Bacteria 21197
299 Ga0496125_0018183 3300048928 Bacteria 6679
300 Ga0496126_0000501 3300048929 Bacteria 76957
301 Ga0496126_0000641 3300048929 Bacteria 65115
302 Ga0496126_0000661 3300048929 Bacteria 63847
303 Ga0501290_000427 3300049513 Bacteria 6624
304 Ga0501292_000013 3300049515 Bacteria 65866
305 Ga0501222_000744 3300049662 Bacteria 4715
306 Ga0501223_000447 3300049663 Bacteria 9956
307 Ga0501249_000265 3300049679 Bacteria 15084
308 Ga0501257_000010 3300049686 Bacteria 53242
309 Ga0501259_000881 3300049688 Bacteria 4947
310 Ga0501279_000004 3300049775 Bacteria 175612
311 Ga0501280_000054 3300049776 Bacteria 33149
312 Ga0501282_000366 3300049778 Bacteria 5425
313 nmdc:mga03n38_16175_c1 3300050490 Bacteria 2898
314 nmdc:mga0k408_10340_c1 3300050493 Bacteria 5046
315 nmdc:mga06z11_18_c1 3300050494 Bacteria 78477
316 nmdc:mga04h51_443_c1 3300050495 Bacteria 9978
317 Ga0500610_0000101 3300053079 Bacteria 25651
318 Ga0500643_000096 3300053087 Bacteria 92125
319 Ga0500641_0001329 3300053096 Bacteria 8784
320 Ga0500607_002655 3300053121 Bacteria 14119
321 Ga0500618_001450 3300053125 Bacteria 10541
322 Ga0500642_0001078 3300053130 Bacteria 7865
323 Ga0500658_0000189 3300053134 Bacteria 29335
324 Ga0500658_0000782 3300053134 Bacteria 13148
325 Ga0500622_0006074 3300053156 Bacteria 7090
326 Ga0500567_000596 3300053723 Bacteria 12885
327 Ga0500625_000004 3300053729 Bacteria 245905
328 Ga0500645_000389 3300053730 Bacteria 30770

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050490 nmdc:mga03n38_16175_c1 nmdc:mga03n38_16175_c1_10_2202 719
2 3300048923 Ga0496120_0023951 Ga0496120_0023951_12_2243 731
3 3300046506 Ga0495583_0037303 Ga0495583_0037303_59_2287 734
4 3300037471 Ga0395905_0052528 Ga0395905_0052528_15_2306 741
5 3300053121 Ga0500607_002655 Ga0500607_002655_11721_14099 741
6 3300031616 Ga0307508_10000011 Ga0307508_1000001116 746
7 3300009545 Ga0105237_10051502 Ga0105237_100515024 751
8 3300005841 Ga0068863_100007065 Ga0068863_10000706510 762
9 3300005843 Ga0068860_100000391 Ga0068860_10000039146 762
10 3300026088 Ga0207641_10024521 Ga0207641_100245212 762
11 3300028381 Ga0268264_10000439 Ga0268264_1000043943 762
12 3300005842 Ga0068858_100005115 Ga0068858_10000511513 763
13 3300009553 Ga0105249_10000002 Ga0105249_10000002256 763
14 3300025961 Ga0207712_10000002 Ga0207712_10000002627 763
15 3300026035 Ga0207703_10001170 Ga0207703_1000117015 763
16 3300025927 Ga0207687_10003478 Ga0207687_100034787 766
17 3300046507 Ga0495606_0001035 Ga0495606_0001035_28463_31156 770
18 3300048921 Ga0496118_0024182 Ga0496118_0024182_929_3505 774
19 3300046660 Ga0495625_0000094 Ga0495625_0000094_82822_85359 775
20 3300053156 Ga0500622_0006074 Ga0500622_0006074_4632_7025 779
21 3300033180 Ga0307510_10006144 Ga0307510_1000614413 781
22 3300046506 Ga0495583_0020285 Ga0495583_0020285_351_2858 781
23 3300046660 Ga0495625_0013255 Ga0495625_0013255_2220_4727 781
24 3300048924 Ga0496121_0000276 Ga0496121_0000276_87197_89719 781
25 3300005618 Ga0068864_100000145 Ga0068864_10000014572 782
26 3300013306 Ga0163162_10007635 Ga0163162_1000763511 782
27 3300026095 Ga0207676_10000072 Ga0207676_1000007299 782
28 3300026118 Ga0207675_100006332 Ga0207675_10000633210 784
29 3300049686 Ga0501257_000010 Ga0501257_000010_22960_25488 785
30 3300005347 Ga0070668_100000007 Ga0070668_100000007107 791
31 3300009553 Ga0105249_10002539 Ga0105249_100025399 791
32 3300025931 Ga0207644_10000111 Ga0207644_1000011164 791
33 3300025972 Ga0207668_10000054 Ga0207668_1000005480 791
34 3300028381 Ga0268264_10029692 Ga0268264_100296921 791
35 3300005548 Ga0070665_100000043 Ga0070665_100000043263 795
36 3300028379 Ga0268266_10000002 Ga0268266_10000002328 795
37 3300049513 Ga0501290_000427 Ga0501290_000427_884_3499 795
38 3300049515 Ga0501292_000013 Ga0501292_000013_48824_51385 795
39 3300049662 Ga0501222_000744 Ga0501222_000744_758_3373 795
40 3300049663 Ga0501223_000447 Ga0501223_000447_757_3372 795
41 3300049688 Ga0501259_000881 Ga0501259_000881_1146_3707 795
42 3300049775 Ga0501279_000004 Ga0501279_000004_73342_75903 795
43 3300049776 Ga0501280_000054 Ga0501280_000054_25781_28396 795
44 3300049778 Ga0501282_000366 Ga0501282_000366_1737_4298 795
45 3300003214 JGI25165J46597_1000010 JGI25165J46597_1000010105 796
46 3300005842 Ga0068858_100000268 Ga0068858_10000026825 796
47 3300009177 Ga0105248_10029324 Ga0105248_100293245 796
48 3300025261 Ga0209233_1000044 Ga0209233_1000044378 796
49 3300025941 Ga0207711_10016513 Ga0207711_100165135 796
50 3300026035 Ga0207703_10000139 Ga0207703_1000013953 796
51 3300046460 Ga0495638_0002459 Ga0495638_0002459_9940_12465 796
52 3300048924 Ga0496121_0000190 Ga0496121_0000190_4208_6832 796
53 3300053134 Ga0500658_0000189 Ga0500658_0000189_17228_19753 796
54 3300009177 Ga0105248_10002631 Ga0105248_100026313 797
55 3300025914 Ga0207671_10000924 Ga0207671_1000092420 797
56 3300025941 Ga0207711_10004397 Ga0207711_100043973 797
57 3300031911 Ga0307412_10001373 Ga0307412_100013732 797
58 3300003773 Ga0055537_1000852 Ga0055537_100085215 798
59 3300003775 Ga0055524_1000387 Ga0055524_10003877 798
60 3300005578 Ga0068854_100003588 Ga0068854_1000035884 798
61 3300025263 Ga0209565_1000029 Ga0209565_1000029211 798
62 3300025273 Ga0209673_1002174 Ga0209673_10021744 798
63 3300025291 Ga0209675_1009359 Ga0209675_10093593 798
64 3300025297 Ga0209758_1008954 Ga0209758_10089545 798
65 3300025299 Ga0209256_1000008 Ga0209256_1000008819 798
66 3300025304 Ga0209257_1004326 Ga0209257_10043266 798
67 3300026116 Ga0207674_10008623 Ga0207674_100086236 798
68 3300045051 Ga0451576_0000017 Ga0451576_0000017_105945_108617 798
69 3300053087 Ga0500643_000096 Ga0500643_000096_33622_36126 798
70 3300053134 Ga0500658_0000782 Ga0500658_0000782_10559_13063 798
71 3300005262 Ga0065165_1001249 Ga0065165_100124933 799
72 3300025924 Ga0207694_10023969 Ga0207694_100239693 799
73 3300005295 Ga0065707_10081714 Ga0065707_1008171460 800
74 3300014326 Ga0157380_10000292 Ga0157380_1000029228 800
75 3300025972 Ga0207668_10016203 Ga0207668_100162034 800
76 3300046453 Ga0495627_000427 Ga0495627_000427_6858_9386 800
77 3300046512 Ga0495610_0000199 Ga0495610_0000199_15298_17826 800
78 3300047470 Ga0495681_0000038 Ga0495681_0000038_27415_29943 800
79 3300005841 Ga0068863_100000027 Ga0068863_10000002721 801
80 3300026088 Ga0207641_10000045 Ga0207641_10000045154 801
81 3300046453 Ga0495627_000171 Ga0495627_000171_28752_31280 801
82 3300053096 Ga0500641_0001329 Ga0500641_0001329_5889_8426 802
83 3300005353 Ga0070669_100000012 Ga0070669_10000001284 803
84 3300005841 Ga0068863_100089528 Ga0068863_1000895281 803
85 3300013306 Ga0163162_10038321 Ga0163162_100383212 803
86 3300025315 Ga0207697_10000003 Ga0207697_1000000364 803
87 3300025903 Ga0207680_10000144 Ga0207680_1000014430 803
88 3300025923 Ga0207681_10000004 Ga0207681_10000004487 803
89 3300025941 Ga0207711_10008027 Ga0207711_100080275 803
90 3300048905 Ga0496102_0000497 Ga0496102_0000497_10927_13425 804
91 3300048906 Ga0496103_0000205 Ga0496103_0000205_11551_14049 804
92 3300048908 Ga0496105_0001212 Ga0496105_0001212_6365_8863 804
93 3300048918 Ga0496115_0000197 Ga0496115_0000197_10104_12602 804
94 3300048920 Ga0496117_0000628 Ga0496117_0000628_10944_13442 804
95 3300048921 Ga0496118_0000154 Ga0496118_0000154_62786_65284 804
96 3300048924 Ga0496121_0000986 Ga0496121_0000986_4708_7206 804
97 3300048927 Ga0496124_0000655 Ga0496124_0000655_10953_13451 804
98 3300048929 Ga0496126_0000501 Ga0496126_0000501_63505_66003 804
99 3300046616 Ga0495668_0010340 Ga0495668_0010340_847_3354 805
100 3300005331 Ga0070670_100001577 Ga0070670_10000157713 806
101 3300005347 Ga0070668_100000001 Ga0070668_10000000181 806
102 3300005353 Ga0070669_100020675 Ga0070669_1000206753 806
103 3300005355 Ga0070671_100000046 Ga0070671_10000004697 806
104 3300005367 Ga0070667_100000006 Ga0070667_100000006212 806
105 3300005617 Ga0068859_100007304 Ga0068859_1000073047 806
106 3300005842 Ga0068858_100000348 Ga0068858_1000003487 806
107 3300005843 Ga0068860_100000074 Ga0068860_10000007453 806
108 3300006931 Ga0097620_100007304 Ga0097620_1000073047 806
109 3300025923 Ga0207681_10004717 Ga0207681_100047173 806
110 3300025931 Ga0207644_10001037 Ga0207644_1000103713 806
111 3300025972 Ga0207668_10000009 Ga0207668_1000000976 806
112 3300025986 Ga0207658_10000010 Ga0207658_10000010209 806
113 3300026035 Ga0207703_10004103 Ga0207703_100041037 806
114 3300026088 Ga0207641_10000584 Ga0207641_1000058421 806
115 3300028380 Ga0268265_10000803 Ga0268265_1000080332 806
116 3300028381 Ga0268264_10000070 Ga0268264_10000070149 806
117 3300032126 Ga0307415_100033466 Ga0307415_1000334662 806
118 3300001990 JGI24737J22298_10004013 JGI24737J22298_100040135 807
119 3300003215 JGI25153J46596_10000182 JGI25153J46596_1000018213 807
120 3300003759 Ga0055525_1000118 Ga0055525_100011876 807
121 3300003762 Ga0055542_1000076 Ga0055542_100007645 807
122 3300003763 Ga0055529_1000004 Ga0055529_100000499 807
123 3300005327 Ga0070658_10001294 Ga0070658_1000129413 807
124 3300005356 Ga0070674_100049614 Ga0070674_1000496141 807
125 3300005456 Ga0070678_100057052 Ga0070678_1000570522 807
126 3300009148 Ga0105243_10000490 Ga0105243_100004906 807
127 3300009174 Ga0105241_10001573 Ga0105241_1000157312 807
128 3300013102 Ga0157371_10000062 Ga0157371_1000006293 807
129 3300025226 Ga0209674_102414 Ga0209674_1024142 807
130 3300025230 Ga0209563_100070 Ga0209563_10007047 807
131 3300025254 Ga0209148_1000008 Ga0209148_1000008591 807
132 3300025272 Ga0209455_1000002 Ga0209455_1000002833 807
133 3300025297 Ga0209758_1000007 Ga0209758_1000007734 807
134 3300025909 Ga0207705_10000350 Ga0207705_1000035043 807
135 3300025911 Ga0207654_10000226 Ga0207654_1000022625 807
136 3300025919 Ga0207657_10028704 Ga0207657_100287044 807
137 3300025920 Ga0207649_10007145 Ga0207649_100071456 807
138 3300025935 Ga0207709_10000005 Ga0207709_10000005566 807
139 3300025937 Ga0207669_10002226 Ga0207669_100022261 807
140 3300025937 Ga0207669_10009416 Ga0207669_100094162 807
141 3300025949 Ga0207667_10000001 Ga0207667_100000011086 807
142 3300026067 Ga0207678_10009153 Ga0207678_100091531 807
143 3300026078 Ga0207702_10000862 Ga0207702_1000086227 807
144 3300026116 Ga0207674_10043649 Ga0207674_100436491 807
145 3300026121 Ga0207683_10031481 Ga0207683_100314814 807
146 3300028786 Ga0307517_10007395 Ga0307517_1000739512 807
147 3300046471 Ga0495650_0000995 Ga0495650_0000995_3511_6003 807
148 3300046500 Ga0495596_0002029 Ga0495596_0002029_5336_7828 807
149 3300046506 Ga0495583_0003196 Ga0495583_0003196_6904_9396 807
150 3300046507 Ga0495606_0002116 Ga0495606_0002116_5810_8302 807
151 3300046524 Ga0495648_0000323 Ga0495648_0000323_40136_42628 807
152 3300046558 Ga0495633_0001669 Ga0495633_0001669_3566_6058 807
153 3300046616 Ga0495668_0000059 Ga0495668_0000059_159093_161585 807
154 3300046684 Ga0495669_0000509 Ga0495669_0000509_10538_13033 807
155 3300046809 Ga0495600_0003009 Ga0495600_0003009_1462_3954 807
156 3300047323 Ga0495683_0012474 Ga0495683_0012474_1722_4214 807
157 3300047443 Ga0495687_001774 Ga0495687_001774_11141_13633 807
158 3300047445 Ga0495677_0000822 Ga0495677_0000822_9948_12440 807
159 3300048924 Ga0496121_0000024 Ga0496121_0000024_66893_69427 807
160 3300048926 Ga0496123_0011072 Ga0496123_0011072_625_3117 807
161 3300048928 Ga0496125_0002988 Ga0496125_0002988_9115_11607 807
162 3300050493 nmdc:mga0k408_10340_c1 nmdc:mga0k408_10340_c1_951_3443 807
163 3300053079 Ga0500610_0000101 Ga0500610_0000101_12605_15100 807
164 3300053130 Ga0500642_0001078 Ga0500642_0001078_713_3205 807
165 3300048905 Ga0496102_0000010 Ga0496102_0000010_203433_206012 808
166 3300048906 Ga0496103_0000029 Ga0496103_0000029_92142_94721 808
167 3300048920 Ga0496117_0000037 Ga0496117_0000037_204035_206614 808
168 3300048921 Ga0496118_0000034 Ga0496118_0000034_201839_204418 808
169 3300048927 Ga0496124_0000033 Ga0496124_0000033_201839_204418 808
170 3300046525 Ga0495663_0000805 Ga0495663_0000805_873_3413 809
171 iso_pu_bacteria 2990265787 2990268054 810
172 iso_pu_bacteria 2993693658 2993696922 810
173 3300005339 Ga0070660_100003184 Ga0070660_1000031843 811
174 3300005366 Ga0070659_100000005 Ga0070659_100000005205 811
175 3300025919 Ga0207657_10001518 Ga0207657_1000151815 811
176 3300025932 Ga0207690_10000020 Ga0207690_1000002021 811
177 iso_pu_bacteria 2512564014 2512641669 811
178 iso_pu_bacteria 2599185359 2600227093 811
179 iso_pu_bacteria 2643221541 2643726777 811
180 iso_pu_bacteria 2643221605 2644040286 811
181 iso_pu_bacteria 2643221606 2644046182 811
182 iso_pu_bacteria 2643221671 2644393007 811
183 iso_pu_bacteria 2818991466 2819715455 811
184 iso_pu_bacteria 2830075706 2830076128 811
185 iso_pu_bacteria 2885429604 2885432679 811
186 iso_pu_bacteria 2928526807 2928530886 811
187 iso_pu_bacteria 2928968154 2928971039 811
188 3300005338 Ga0068868_100000032 Ga0068868_10000003214 812
189 3300005985 Ga0081539_10026719 Ga0081539_100267193 812
190 3300026023 Ga0207677_10000100 Ga0207677_1000010051 812
191 3300048924 Ga0496121_0016344 Ga0496121_0016344_2992_5532 812
192 iso_pu_bacteria 2643221622 2644127433 812
193 iso_pu_bacteria 2751185897 2753766569 812
194 iso_pu_bacteria 8057101203 8057105387 812
195 3300002076 JGI24749J21850_1000157 JGI24749J21850_10001578 814
196 3300002459 JGI24751J29686_10000414 JGI24751J29686_100004145 814
197 3300002774 JGI25150J39212_1000067 JGI25150J39212_10000671 814
198 3300003215 JGI25153J46596_10000125 JGI25153J46596_1000012576 814
199 3300003781 Ga0055536_1005046 Ga0055536_10050462 814
200 3300003792 Ga0055540_1001895 Ga0055540_100189511 814
201 3300005331 Ga0070670_100000158 Ga0070670_10000015840 814
202 3300005353 Ga0070669_100000031 Ga0070669_100000031116 814
203 3300005367 Ga0070667_100002591 Ga0070667_1000025916 814
204 3300005618 Ga0068864_100000123 Ga0068864_10000012340 814
205 3300005844 Ga0068862_100000014 Ga0068862_100000014142 814
206 3300005844 Ga0068862_100000043 Ga0068862_100000043132 814
207 3300014326 Ga0157380_10000040 Ga0157380_1000004039 814
208 3300025263 Ga0209565_1000052 Ga0209565_1000052216 814
209 3300025923 Ga0207681_10000014 Ga0207681_10000014321 814
210 3300025925 Ga0207650_10000015 Ga0207650_10000015334 814
211 3300025941 Ga0207711_10001014 Ga0207711_1000101416 814
212 3300026095 Ga0207676_10000021 Ga0207676_1000002168 814
213 3300028380 Ga0268265_10000013 Ga0268265_1000001339 814
214 3300028380 Ga0268265_10000048 Ga0268265_1000004811 814
215 3300046512 Ga0495610_0000418 Ga0495610_0000418_15954_18473 814
216 3300046522 Ga0495643_0000126 Ga0495643_0000126_22801_25320 814
217 3300048090 Ga0495615_0000077 Ga0495615_0000077_1409_3979 814
218 iso_pu_bacteria 2879163058 2879163495 814
219 iso_pu_bacteria 2919709256 2919711993 814
220 3300005355 Ga0070671_100000019 Ga0070671_10000001984 815
221 3300005618 Ga0068864_100002101 Ga0068864_1000021012 815
222 3300005618 Ga0068864_100014245 Ga0068864_1000142455 815
223 3300005842 Ga0068858_100000951 Ga0068858_10000095110 815
224 3300005843 Ga0068860_100016780 Ga0068860_1000167806 815
225 3300006353 Ga0075370_10002265 Ga0075370_100022655 815
226 3300009545 Ga0105237_10032356 Ga0105237_100323563 815
227 3300025914 Ga0207671_10002056 Ga0207671_1000205625 815
228 3300025931 Ga0207644_10000031 Ga0207644_1000003185 815
229 3300025972 Ga0207668_10005103 Ga0207668_100051033 815
230 3300025981 Ga0207640_10003971 Ga0207640_100039714 815
231 3300026095 Ga0207676_10006990 Ga0207676_100069906 815
232 3300027866 Ga0209813_10000029 Ga0209813_1000002961 815
233 3300028381 Ga0268264_10000541 Ga0268264_1000054143 815
234 3300046660 Ga0495625_0013999 Ga0495625_0013999_2078_4627 815
235 3300046691 Ga0495670_0000016 Ga0495670_0000016_69675_72182 815
236 3300047443 Ga0495687_000152 Ga0495687_000152_103036_105588 815
237 3300048918 Ga0496115_0001166 Ga0496115_0001166_3327_5840 815
238 3300048927 Ga0496124_0008603 Ga0496124_0008603_7222_9753 815
239 3300049679 Ga0501249_000265 Ga0501249_000265_10180_12687 815
240 3300050494 nmdc:mga06z11_18_c1 nmdc:mga06z11_18_c1_52273_54786 815
241 3300050495 nmdc:mga04h51_443_c1 nmdc:mga04h51_443_c1_1527_4040 815
242 3300053730 Ga0500645_000389 Ga0500645_000389_16586_19138 815
243 iso_pu_bacteria 2808606401 2809063512 815
244 iso_pu_bacteria 2808606404 2809079517 815
245 iso_pu_bacteria 2808606405 2809083845 815
246 iso_pu_bacteria 2880518877 2880521020 815
247 iso_pu_bacteria 2946787523 2946790328 815
248 3300003791 Ga0055530_10001385 Ga0055530_100013858 816
249 3300005367 Ga0070667_100000066 Ga0070667_10000006630 816
250 3300005843 Ga0068860_100000013 Ga0068860_100000013149 816
251 3300025298 Ga0209050_1000167 Ga0209050_1000167115 816
252 3300025304 Ga0209257_1000028 Ga0209257_1000028621 816
253 3300025986 Ga0207658_10000132 Ga0207658_1000013278 816
254 3300026088 Ga0207641_10006380 Ga0207641_100063803 816
255 3300028381 Ga0268264_10000039 Ga0268264_10000039149 816
256 3300046506 Ga0495583_0000212 Ga0495583_0000212_84523_87132 816
257 3300005327 Ga0070658_10003990 Ga0070658_1000399010 817
258 3300005333 Ga0070677_10000160 Ga0070677_100001603 817
259 3300005355 Ga0070671_100003286 Ga0070671_1000032869 817
260 3300025949 Ga0207667_10114274 Ga0207667_101142742 817
261 3300026088 Ga0207641_10043774 Ga0207641_100437743 817
262 3300031911 Ga0307412_10000414 Ga0307412_100004142 817
263 3300048917 Ga0496114_0000016 Ga0496114_0000016_105859_108417 817
264 3300048927 Ga0496124_0000675 Ga0496124_0000675_45541_48048 817
265 3300005564 Ga0070664_100008513 Ga0070664_1000085132 818
266 3300005618 Ga0068864_100004984 Ga0068864_1000049845 818
267 3300014968 Ga0157379_10008156 Ga0157379_100081567 818
268 3300025932 Ga0207690_10010598 Ga0207690_100105982 818
269 3300025986 Ga0207658_10046601 Ga0207658_100466012 818
270 3300026035 Ga0207703_10054701 Ga0207703_100547012 818
271 3300026116 Ga0207674_10005210 Ga0207674_100052104 818
272 3300046460 Ga0495638_0025153 Ga0495638_0025153_1013_3541 818
273 3300048911 Ga0496108_0002988 Ga0496108_0002988_9845_12364 818
274 3300053125 Ga0500618_001450 Ga0500618_001450_5875_8409 818
275 3300005617 Ga0068859_100000692 Ga0068859_10000069214 819
276 3300006931 Ga0097620_100000692 Ga0097620_10000069225 819
277 3300009101 Ga0105247_10002696 Ga0105247_100026966 819
278 3300025941 Ga0207711_10034784 Ga0207711_100347843 819
279 3300025986 Ga0207658_10005537 Ga0207658_100055375 819
280 3300046519 Ga0495632_0000070 Ga0495632_0000070_1814_4342 819
281 3300046524 Ga0495648_0033033 Ga0495648_0033033_698_3226 819
282 3300046525 Ga0495663_0000004 Ga0495663_0000004_1823_4351 819
283 3300046558 Ga0495633_0000243 Ga0495633_0000243_61723_64251 819
284 3300046520 Ga0495637_0000728 Ga0495637_0000728_6377_9037 820
285 3300046522 Ga0495643_0000010 Ga0495643_0000010_33006_35666 820
286 3300046558 Ga0495633_0000105 Ga0495633_0000105_79504_82059 820
287 3300046692 Ga0495671_0000014 Ga0495671_0000014_33006_35666 820
288 3300047470 Ga0495681_0001063 Ga0495681_0001063_5878_8538 820
289 3300025245 Ga0207425_1000005 Ga0207425_1000005837 822
290 3300025294 Ga0209025_1001007 Ga0209025_100100740 822
291 3300025297 Ga0209758_1000002 Ga0209758_1000002508 822
292 3300025298 Ga0209050_1000001 Ga0209050_1000001459 822
293 3300025303 Ga0209051_1000472 Ga0209051_100047245 822
294 3300025972 Ga0207668_10003237 Ga0207668_100032378 822
295 3300048921 Ga0496118_0021591 Ga0496118_0021591_1717_4245 822
296 3300048924 Ga0496121_0000441 Ga0496121_0000441_9578_12142 822
297 iso_pu_bacteria 2510917021 2511130918 824
298 iso_pu_bacteria 2818991438 2819551162 824
299 iso_pu_bacteria 8054302542 8054303928 824
300 2162886007 SwRhRL2b_contig_3705370 SwRhRL2b_0621.00000660 826
301 3300005289 Ga0065704_10070189 Ga0065704_1007018998 826
302 3300005295 Ga0065707_10087660 Ga0065707_100876602 826
303 3300005842 Ga0068858_100000803 Ga0068858_10000080314 826
304 3300026035 Ga0207703_10018441 Ga0207703_100184413 826
305 3300031911 Ga0307412_10021885 Ga0307412_100218853 826
306 3300025298 Ga0209050_1000267 Ga0209050_100026760 828
307 3300046453 Ga0495627_000609 Ga0495627_000609_21500_24019 828
308 3300046471 Ga0495650_0005318 Ga0495650_0005318_3162_5681 828
309 3300046500 Ga0495596_0006891 Ga0495596_0006891_2541_5072 828
310 3300046519 Ga0495632_0000732 Ga0495632_0000732_22619_25138 828
311 3300047470 Ga0495681_0000153 Ga0495681_0000153_24789_27308 828
312 3300048091 Ga0495626_0000255 Ga0495626_0000255_32101_34632 828
313 3300048919 Ga0496116_0000045 Ga0496116_0000045_31706_34237 828
314 3300048926 Ga0496123_0002896 Ga0496123_0002896_8940_11471 828
315 3300048927 Ga0496124_0039792 Ga0496124_0039792_30_2561 828
316 3300048928 Ga0496125_0018183 Ga0496125_0018183_445_2976 828
317 3300048929 Ga0496126_0000641 Ga0496126_0000641_61179_63710 828
318 3300013306 Ga0163162_10042787 Ga0163162_100427873 829
319 3300005578 Ga0068854_100000219 Ga0068854_1000002194 830
320 3300005614 Ga0068856_100041997 Ga0068856_1000419972 830
321 3300005616 Ga0068852_100000061 Ga0068852_10000006132 830
322 3300025904 Ga0207647_10014489 Ga0207647_100144891 830
323 3300025909 Ga0207705_10000007 Ga0207705_10000007283 830
324 3300025981 Ga0207640_10000750 Ga0207640_1000075012 830
325 3300026078 Ga0207702_10001794 Ga0207702_1000179415 830
326 3300026142 Ga0207698_10000156 Ga0207698_1000015611 830
327 iso_pu_bacteria 2739367664 2739650691 830
328 iso_pu_bacteria 2739367865 2740029164 830
329 iso_pu_bacteria 2738541275 2738711219 831
330 iso_pu_bacteria 2738541301 2738849644 831
331 iso_pu_bacteria 2738541304 2738865373 831
332 iso_pu_bacteria 2738543022 2739297891 831
333 iso_pu_bacteria 2738543033 2739359569 831
334 iso_pu_bacteria 2928100450 2928103963 831
335 iso_pu_bacteria 2928959182 2928961493 831
336 3300005616 Ga0068852_100064738 Ga0068852_1000647382 833
337 3300025913 Ga0207695_10001898 Ga0207695_1000189827 833
338 3300053729 Ga0500625_000004 Ga0500625_000004_110873_113443 833
339 3300053723 Ga0500567_000596 Ga0500567_000596_1555_4092 834
340 2162886007 SwRhRL2b_contig_3239060 SwRhRL2b_0415.00002060 835
341 3300005289 Ga0065704_10000367 Ga0065704_100003677 835
342 3300005353 Ga0070669_100000068 Ga0070669_10000006874 835
343 3300005355 Ga0070671_100000777 Ga0070671_1000007776 835
344 3300005367 Ga0070667_100000885 Ga0070667_1000008856 835
345 3300005548 Ga0070665_100007146 Ga0070665_10000714610 835
346 3300005843 Ga0068860_100014304 Ga0068860_1000143046 835
347 3300009177 Ga0105248_10096771 Ga0105248_100967712 835
348 3300025923 Ga0207681_10000105 Ga0207681_1000010528 835
349 3300025931 Ga0207644_10001155 Ga0207644_100011557 835
350 3300025941 Ga0207711_10028465 Ga0207711_100284653 835
351 3300025986 Ga0207658_10000205 Ga0207658_100002056 835
352 3300028379 Ga0268266_10004774 Ga0268266_100047742 835
353 3300031903 Ga0307407_10005479 Ga0307407_100054793 835
354 3300048905 Ga0496102_0002820 Ga0496102_0002820_2681_5221 835
355 3300048906 Ga0496103_0000289 Ga0496103_0000289_37141_39681 835
356 3300048907 Ga0496104_0000161 Ga0496104_0000161_47615_50155 835
357 3300048908 Ga0496105_0019273 Ga0496105_0019273_1593_4133 835
358 3300048920 Ga0496117_0019670 Ga0496117_0019670_2410_4950 835
359 3300048922 Ga0496119_0000734 Ga0496119_0000734_8644_11184 835
360 3300048926 Ga0496123_0006076 Ga0496123_0006076_2125_4665 835
361 3300048927 Ga0496124_0006526 Ga0496124_0006526_1580_4120 835
362 3300048928 Ga0496125_0001514 Ga0496125_0001514_30305_32845 835
363 3300048929 Ga0496126_0000661 Ga0496126_0000661_17606_20146 835

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13603

tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

265

436

0.96

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

652

711

0.93

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

31

171

0.92

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

9

232

0.89

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

641

704

0.87

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

734

857

0.83

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

443

609

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
2aji-assembly1.cif.gz_A crystal structure of the editing domain of e. coli leucyl-trna synthetase complexes with isoleucine 0.9137 225 406
2ajg-assembly2.cif.gz_B crystal structure of the editing domain of e. coli leucyl-trna synthetase 0.9118 225 406
2aji-assembly2.cif.gz_B crystal structure of the editing domain of e. coli leucyl-trna synthetase complexes with isoleucine 0.9112 225 408
2aji-assembly2.cif.gz_B crystal structure of the editing domain of e. coli leucyl-trna synthetase complexes with isoleucine 0.9013 225 408
2ajg-assembly2.cif.gz_B crystal structure of the editing domain of e. coli leucyl-trna synthetase 0.892 225 406
ID Description Score Start End Superfamily
af_Q2FXH2_743_805_3.10.20.590 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9816 774 834 3.10.20.590
4as1A05 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.939 776 833 3.10.20.590
af_Q2FXH2_743_805_3.10.20.590 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9364 774 834 3.10.20.590
3zjtA05 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.9341 776 834 3.10.20.590
4arcA03 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9193 223 408 3.90.740.10
ID Description Score Start End GO Terms
AF-A0A2N2IJN9-F1-model_v4 Leucine--tRNA ligase 0.9828 773 835 GO:0004812
GO:0005524
GO:0006418
AF-X0T7U4-F1-model_v4 Leucine--tRNA ligase 0.976 771 835 GO:0004812
GO:0005524
GO:0006418
AF-A0A2V4PIK9-F1-model_v4 deleted 0.9584 771 834
AF-A0A7Y1YWY4-F1-model_v4 Leucine--tRNA ligase 0.9559 774 834 GO:0004812
GO:0005524
GO:0006418
AF-A0A3D0TVQ8-F1-model_v4 Leucine--tRNA ligase 0.9498 772 835 GO:0004812
GO:0005524
GO:0006418

Feature Viewer

pLDDT pTM Quality
83.89 0.77 High
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Predicted Structure (AlphaFold2)

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