F421571

General Info

Members Datasets Scaffolds Average Seq Length
359 243 718 198

Family's Representative Sequence

Representative Sequence 3300031665|Ga0316575_10007007|Ga0316575_100070072
Length 214
Sequence MTAAGTGVAWRMLAYAFGGGWIELVVGPMFSGKSEELIRRVTRALIARQKVQVFKPAIDDRYESAAVASHGGRSLEAVAVDDTAGIAALLEEDTQVVAVDEGQFFDAGLVPLALELADAGKRVIVAGLDLDFRGEPFGPMPALLAQAEMVEKLTAICSCGRAATRTQRLIGGHPAHFDDPVILVGAAESYEPRCRTHHVVLREARDTPLFDLTP

Samples

Sample ID Description Type Environment
1 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
17 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
18 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
19 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
20 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
21 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
34 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
37 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
56 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
57 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
60 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
61 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
62 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
66 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
72 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
76 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
77 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
78 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
79 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
80 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
81 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
82 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
83 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
84 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
85 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
86 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
90 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
99 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
100 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
101 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
102 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
103 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
104 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
105 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
108 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300049131 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_B_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
120 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
121 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
122 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300049535 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
124 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300049538 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
127 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
128 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
129 3300049542 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300049544 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300049546 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_B_4_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300049547 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
133 3300049548 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
134 3300049549 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
135 3300049550 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300049553 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_A_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
141 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
142 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
143 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
144 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
149 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
150 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
151 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
152 2554235283 Bacillus safensis VK Isolate Rhizosphere
153 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
154 2599185353 Staphylococcus sp. NFPP34 Isolate Rhizoplane
155 2600254943 Staphylococcus pasteuri NFIX07 Isolate Rhizoplane
156 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
157 2643221729 Bacillus sp. Root11 Isolate Unclassified
158 2643221730 Bacillus sp. Root131 Isolate Unclassified
159 2643221731 Bacillus sp. Root147 Isolate Unclassified
160 2643221732 Bacillus sp. Root239 Isolate Unclassified
161 2643221735 Bacillus sp. Root920 Isolate Unclassified
162 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
163 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
164 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
165 2684622632 Bacillus cereus 905 Isolate Unclassified
166 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
167 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
168 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
169 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
170 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
171 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
172 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
173 2738541295 Bacillus sp. OK085 Isolate Unclassified
174 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
175 2738541358 Bacillus sp. OV752 Isolate Unclassified
176 2738543006 Bacillus sp. OK077 Isolate Unclassified
177 2738543010 Bacillus sp. YR335 Isolate Unclassified
178 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
179 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
180 2811994870 Bacillus sp. JB4 Isolate Unclassified
181 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
182 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
183 2818991441 Niallia circulans 3243 Isolate Rhizosphere
184 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
185 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
186 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
187 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
188 2842682962 Bacillus sp. R-72492 Isolate Unclassified
189 2842882022 Bacillus sp. R-71893 Isolate Unclassified
190 2849139964 Bacillus sp. R-71875 Isolate Unclassified
191 2857581216 Bacillus sp. R-71922 Isolate Unclassified
192 2860837431 Bacillus sp. WR11 Isolate Unclassified
193 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
194 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
195 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
196 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
197 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
198 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
199 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
200 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
201 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
202 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
203 2919720352 Priestia megaterium 4340 Isolate Unclassified
204 2919726948 Bacillus pumilus 4489 Isolate Unclassified
205 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
206 2929004312 Priestia megaterium 1104 Isolate Unclassified
207 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
208 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
209 2938917290 Bacillus sp. CR71 Isolate Unclassified
210 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
211 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
212 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
213 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
214 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
215 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
216 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
217 2965761152 Bacillus sp. COPE52 Isolate Unclassified
218 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
219 2969141011 Bacillus velezensis MH25 Isolate Unclassified
220 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
221 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
222 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
223 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
224 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
225 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
226 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
227 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
228 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
229 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
230 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
231 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
232 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
233 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
234 8022653035 Bacillus sp. Rc4 Isolate Unclassified
235 8022792930 Bacillus sp. Xin Isolate Rhizosphere
236 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
237 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
238 8023438354 Bacillus sp. BH2 Isolate Unclassified
239 8023444577 Bacillus sp. BH32 Isolate Unclassified
240 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
241 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
242 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
243 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 44.57
Metatranscriptomes 28.69
Isolates 26.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.01
Nodule 0
Rhizoplane 6.69
Rhizosphere 70.19
Stem 0
Stem Tuber 0
Unclassified 2.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316575_10007007 3300031665 Bacteria 4078
2 JGI25159J45721_1011137 3300002987 Bacteria 2228
3 JGI25159J45721_1033654 3300002987 Bacteria 799
4 JGI25151J46595_10041049 3300003187 Bacteria 1687
5 rootH2_10082408 3300003320 Bacteria 2276
6 rootL2_10124591 3300003322 Bacteria 4762
7 rootH1_10073586 3300003323 Bacteria 3791
8 Ga0006562J51391_1000330 3300003578 Bacteria 10510
9 Ga0055532_1001606 3300003758 Bacteria 5973
10 Ga0055528_1001055 3300003790 Bacteria 18211
11 Ga0070670_100336524 3300005331 Bacteria 1324
12 Ga0070666_10112582 3300005335 Bacteria 1883
13 Ga0070669_100096629 3300005353 Bacteria 2223
14 Ga0070669_100615952 3300005353 Bacteria 911
15 Ga0070671_100005752 3300005355 Bacteria 9875
16 Ga0070672_100208494 3300005543 Bacteria 1636
17 Ga0070665_100092459 3300005548 Bacteria 3030
18 Ga0068870_10027160 3300005840 Bacteria 2861
19 Ga0070715_10304966 3300006163 Bacteria 853
20 Ga0105251_10012088 3300009011 Bacteria 4899
21 Ga0105251_10038543 3300009011 Bacteria 2341
22 Ga0105244_10123380 3300009036 Bacteria 1253
23 Ga0105244_10328110 3300009036 Bacteria 706
24 Ga0105250_10003794 3300009092 Bacteria 7095
25 Ga0105250_10075037 3300009092 Bacteria 1368
26 Ga0105250_10202636 3300009092 Bacteria 837
27 Ga0105247_10003421 3300009101 Bacteria 10365
28 Ga0105243_10000209 3300009148 Bacteria 68700
29 Ga0105242_10003006 3300009176 Bacteria 13178
30 Ga0105249_10081999 3300009553 Bacteria 3000
31 Ga0105249_10113988 3300009553 Bacteria 2559
32 Ga0105246_10003326 3300011119 Bacteria 9733
33 Ga0105246_10101906 3300011119 Bacteria 2092
34 Ga0105246_10220020 3300011119 Bacteria 1488
35 Ga0157374_10073381 3300013296 Bacteria 3230
36 Ga0157378_10002375 3300013297 Bacteria 16722
37 Ga0157372_10278167 3300013307 Bacteria 1946
38 Ga0157377_10000894 3300014745 Bacteria 12440
39 Ga0157379_10479992 3300014968 Bacteria 1150
40 Ga0209147_100559 3300025229 Bacteria 20945
41 Ga0209147_102458 3300025229 Bacteria 4584
42 Ga0209673_1002651 3300025273 Bacteria 11967
43 Ga0209130_1002659 3300025284 Bacteria 8536
44 Ga0209130_1003205 3300025284 Bacteria 7217
45 Ga0209675_1012108 3300025291 Bacteria 2804
46 Ga0209025_1000011 3300025294 Bacteria 976387
47 Ga0209025_1001513 3300025294 Bacteria 29849
48 Ga0209025_1002114 3300025294 Bacteria 22397
49 Ga0209025_1015385 3300025294 Bacteria 4615
50 Ga0209025_1027738 3300025294 Bacteria 2798
51 Ga0209025_1044172 3300025294 Bacteria 1866
52 Ga0207426_1005835 3300025302 Bacteria 5501
53 Ga0207696_1001795 3300025711 Bacteria 11078
54 Ga0207696_1007357 3300025711 Bacteria 4321
55 Ga0207696_1007985 3300025711 Bacteria 4089
56 Ga0207696_1009795 3300025711 Bacteria 3554
57 Ga0207655_1006345 3300025728 Bacteria 7850
58 Ga0207655_1008021 3300025728 Bacteria 6770
59 Ga0207713_1002687 3300025735 Bacteria 12718
60 Ga0207713_1027455 3300025735 Bacteria 2585
61 Ga0207713_1075891 3300025735 Bacteria 1225
62 Ga0207680_10079755 3300025903 Bacteria 2054
63 Ga0207685_10250967 3300025905 Bacteria 856
64 Ga0207643_10172542 3300025908 Bacteria 1306
65 Ga0207681_10215981 3300025923 Bacteria 1481
66 Ga0207650_10520984 3300025925 Bacteria 995
67 Ga0207644_10040383 3300025931 Bacteria 3297
68 Ga0207709_10013650 3300025935 Bacteria 4482
69 Ga0207709_10117463 3300025935 Bacteria 1790
70 Ga0207691_10115239 3300025940 Bacteria 2386
71 Ga0207712_10083992 3300025961 Bacteria 2325
72 Ga0209371_1001260 3300027312 Bacteria 17981
73 Ga0268266_10239807 3300028379 Bacteria 1673
74 Ga0268256_1001100 3300030500 Bacteria 17605
75 Ga0307408_100009692 3300031548 Bacteria 6350
76 Ga0307408_100287552 3300031548 Bacteria 1371
77 Ga0316575_10042867 3300031665 Bacteria 1792
78 Ga0316579_10208065 3300031691 Bacteria 946
79 Ga0316576_10015002 3300031727 Bacteria 5187
80 Ga0316576_10015468 3300031727 Bacteria 5122
81 Ga0316576_10258051 3300031727 Bacteria 1308
82 Ga0316578_10021345 3300031728 Bacteria 3592
83 Ga0307405_10203975 3300031731 Bacteria 1438
84 Ga0316577_10009647 3300031733 Bacteria 5196
85 Ga0316577_10050904 3300031733 Bacteria 2312
86 Ga0316577_10111612 3300031733 Bacteria 1534
87 Ga0307416_100240370 3300032002 Bacteria 1754
88 Ga0316583_10009337 3300032133 Bacteria 3532
89 Ga0316583_10186413 3300032133 Bacteria 721
90 Ga0316585_10003952 3300032137 Bacteria 4104
91 Ga0316585_10016953 3300032137 Bacteria 2198
92 Ga0316585_10176246 3300032137 Bacteria 706
93 Ga0316580_10001739 3300032139 Bacteria 5810
94 Ga0316580_10024293 3300032139 Bacteria 1873
95 Ga0316580_10101959 3300032139 Unclassified 878
96 Ga0316593_10006767 3300032168 Bacteria 3115
97 Ga0316593_10016424 3300032168 Unclassified 2244
98 Ga0316593_10017497 3300032168 Unclassified 2187
99 Ga0316593_10019118 3300032168 Bacteria 2114
100 Ga0316593_10021765 3300032168 Unclassified 2008
101 Ga0316593_10024118 3300032168 Bacteria 1926
102 Ga0316593_10025789 3300032168 Bacteria 1875
103 Ga0316593_10030439 3300032168 Bacteria 1752
104 Ga0316593_10033052 3300032168 Bacteria 1692
105 Ga0316593_10037221 3300032168 Bacteria 1607
106 Ga0316593_10112525 3300032168 Bacteria 973
107 Ga0316593_10113319 3300032168 Bacteria 969
108 Ga0316593_10126720 3300032168 Bacteria 919
109 Ga0316592_1008334 3300033524 Bacteria 2045
110 Ga0316596_1000728 3300033541 Bacteria 6012
111 Ga0316596_1011431 3300033541 Bacteria 2169
112 Ga0316596_1091443 3300033541 Unclassified 820
113 Ga0316574_0004934 3300035398 Bacteria 7067
114 Ga0316582_0063724 3300036647 Bacteria 2369
115 Ga0316582_0319956 3300036647 Bacteria 1066
116 Ga0316582_0416941 3300036647 Bacteria 925
117 Ga0395900_0580812 3300037418 Bacteria 1063
118 Ga0395898_0802118 3300037466 Bacteria 882
119 Ga0436364_0181412 3300037853 Bacteria 2231
120 Ga0436365_0126880 3300039437 Unclassified 1266
121 Ga0436360_0477784 3300039438 Bacteria 754
122 Ga0436362_1137858 3300039453 Unclassified 1034
123 Ga0453684_0000055 3300044712 Bacteria 532014
124 Ga0453684_0012559 3300044712 Bacteria 13942
125 Ga0453684_0203315 3300044712 Bacteria 2307
126 Ga0453684_0482410 3300044712 Bacteria 1375
127 Ga0466967_0000079 3300045976 Bacteria 34795
128 Ga0466967_1068047 3300045976 Bacteria 804
129 Ga0495627_083477 3300046453 Bacteria 924
130 Ga0495631_0049303 3300046518 Bacteria 1844
131 Ga0495622_0014090 3300046557 Bacteria 3711
132 Ga0495661_0020047 3300046665 Bacteria 4373
133 Ga0495661_0131210 3300046665 Bacteria 1373
134 Ga0495588_0229657 3300046674 Bacteria 979
135 Ga0495589_0039021 3300046794 Bacteria 2375
136 Ga0495660_0112543 3300046810 Bacteria 1387
137 Ga0495683_0009121 3300047323 Bacteria 5286
138 Ga0496100_0000719 3300048903 Bacteria 15828
139 Ga0496101_0109983 3300048904 Bacteria 2073
140 Ga0496101_0400984 3300048904 Bacteria 1080
141 Ga0496102_0006486 3300048905 Bacteria 9975
142 Ga0496103_0008061 3300048906 Bacteria 6255
143 Ga0496104_0024410 3300048907 Bacteria 5560
144 Ga0496105_0008252 3300048908 Bacteria 8098
145 Ga0496106_0001720 3300048909 Bacteria 16330
146 Ga0496107_0000182 3300048910 Bacteria 32619
147 Ga0496108_0001556 3300048911 Bacteria 18160
148 Ga0496109_0001672 3300048912 Bacteria 18485
149 Ga0496109_0583220 3300048912 Bacteria 1054
150 Ga0496110_0000418 3300048913 Bacteria 28889
151 Ga0496110_0002417 3300048913 Bacteria 13981
152 Ga0496110_0184431 3300048913 Bacteria 1895
153 Ga0496110_0271931 3300048913 Unclassified 1543
154 Ga0496111_0001952 3300048914 Bacteria 12237
155 Ga0496111_0007715 3300048914 Bacteria 7076
156 Ga0496112_0136624 3300048915 Bacteria 2421
157 Ga0496113_0007351 3300048916 Bacteria 7076
158 Ga0496113_0163884 3300048916 Bacteria 1758
159 Ga0496114_0068783 3300048917 Bacteria 2973
160 Ga0496116_0016317 3300048919 Bacteria 5815
161 Ga0496117_0033820 3300048920 Bacteria 3861
162 Ga0496118_0042608 3300048921 Bacteria 3579
163 Ga0496119_0001218 3300048922 Bacteria 32113
164 Ga0496121_0100344 3300048924 Bacteria 2235
165 Ga0496122_0008847 3300048925 Bacteria 10743
166 Ga0496124_0022313 3300048927 Bacteria 5805
167 Ga0496125_0018619 3300048928 Bacteria 6591
168 Ga0496126_0016160 3300048929 Bacteria 7476
169 Ga0501306_003579 3300049127 Bacteria 1683
170 Ga0501308_005017 3300049128 Bacteria 1302
171 Ga0501309_001906 3300049129 Bacteria 2156
172 Ga0501310_000800 3300049130 Bacteria 2792
173 Ga0501341_09660 3300049131 Bacteria 628
174 Ga0501343_000250 3300049132 Bacteria 2885
175 Ga0501343_008649 3300049132 Bacteria 816
176 Ga0501305_000476 3300049161 Bacteria 3289
177 Ga0501305_013148 3300049161 Bacteria 1141
178 Ga0501305_013916 3300049161 Bacteria 1119
179 Ga0501305_016631 3300049161 Bacteria 1051
180 Ga0501305_018650 3300049161 Bacteria 1006
181 Ga0501307_000777 3300049162 Bacteria 2398
182 Ga0501307_002157 3300049162 Bacteria 1795
183 Ga0501307_026909 3300049162 Bacteria 780
184 Ga0501307_042729 3300049162 Bacteria 662
185 Ga0501311_005180 3300049527 Bacteria 1419
186 Ga0501311_037457 3300049527 Bacteria 724
187 Ga0501312_000183 3300049528 Bacteria 4248
188 Ga0501312_000254 3300049528 Bacteria 3869
189 Ga0501312_004852 3300049528 Bacteria 1606
190 Ga0501312_005887 3300049528 Bacteria 1510
191 Ga0501312_016403 3300049528 Bacteria 1060
192 Ga0501313_004144 3300049529 Bacteria 1477
193 Ga0501313_005030 3300049529 Bacteria 1381
194 Ga0501313_006092 3300049529 Bacteria 1295
195 Ga0501313_006683 3300049529 Bacteria 1255
196 Ga0501314_011993 3300049530 Bacteria 827
197 Ga0501315_000595 3300049531 Bacteria 2610
198 Ga0501315_015372 3300049531 Bacteria 980
199 Ga0501315_016806 3300049531 Bacteria 951
200 Ga0501315_017496 3300049531 Bacteria 938
201 Ga0501315_026113 3300049531 Bacteria 817
202 Ga0501316_000517 3300049532 Bacteria 2709
203 Ga0501316_001599 3300049532 Bacteria 1962
204 Ga0501316_002172 3300049532 Bacteria 1788
205 Ga0501316_022264 3300049532 Bacteria 806
206 Ga0501317_000090 3300049533 Bacteria 4577
207 Ga0501317_000222 3300049533 Bacteria 3479
208 Ga0501317_000445 3300049533 Bacteria 2871
209 Ga0501317_002952 3300049533 Bacteria 1656
210 Ga0501317_018348 3300049533 Bacteria 925
211 Ga0501317_020032 3300049533 Bacteria 898
212 Ga0501317_022865 3300049533 Bacteria 859
213 Ga0501318_003876 3300049534 Bacteria 1402
214 Ga0501318_004202 3300049534 Bacteria 1369
215 Ga0501318_010260 3300049534 Bacteria 1036
216 Ga0501319_001574 3300049535 Bacteria 1342
217 Ga0501319_001858 3300049535 Bacteria 1279
218 Ga0501320_003234 3300049536 Bacteria 1367
219 Ga0501320_009880 3300049536 Bacteria 963
220 Ga0501321_000125 3300049537 Bacteria 3905
221 Ga0501321_001766 3300049537 Bacteria 1784
222 Ga0501321_002966 3300049537 Bacteria 1520
223 Ga0501321_012684 3300049537 Bacteria 957
224 Ga0501321_035273 3300049537 Bacteria 685
225 Ga0501322_000091 3300049538 Bacteria 3461
226 Ga0501322_000870 3300049538 Bacteria 1558
227 Ga0501322_003020 3300049538 Bacteria 1068
228 Ga0501322_003059 3300049538 Bacteria 1064
229 Ga0501322_013006 3300049538 Bacteria 667
230 Ga0501323_000257 3300049539 Bacteria 3570
231 Ga0501323_001260 3300049539 Bacteria 2194
232 Ga0501323_042259 3300049539 Bacteria 672
233 Ga0501324_001701 3300049540 Bacteria 1507
234 Ga0501324_004439 3300049540 Bacteria 1116
235 Ga0501326_00787 3300049542 Bacteria 1345
236 Ga0501326_03598 3300049542 Bacteria 799
237 Ga0501328_01262 3300049544 Bacteria 986
238 Ga0501330_000063 3300049546 Bacteria 2998
239 Ga0501330_001957 3300049546 Bacteria 1131
240 Ga0501330_011641 3300049546 Bacteria 636
241 Ga0501331_00078 3300049547 Bacteria 2942
242 Ga0501332_01878 3300049548 Bacteria 1141
243 Ga0501332_02070 3300049548 Bacteria 1100
244 Ga0501332_03323 3300049548 Bacteria 929
245 Ga0501333_001359 3300049549 Bacteria 1311
246 Ga0501333_002281 3300049549 Bacteria 1110
247 Ga0501334_01908 3300049550 Bacteria 1201
248 Ga0501334_05006 3300049550 Bacteria 865
249 Ga0501334_09989 3300049550 Bacteria 681
250 Ga0501335_004557 3300049551 Bacteria 1214
251 Ga0501335_012619 3300049551 Bacteria 837
252 Ga0501337_001298 3300049553 Bacteria 1412
253 Ga0501337_004895 3300049553 Bacteria 886
254 Ga0501071_0299372 3300049587 Bacteria 1219
255 Ga0501076_0122976 3300049592 Bacteria 2102
256 Ga0501199_006616 3300049650 Bacteria 1184
257 Ga0501208_005441 3300049655 Bacteria 1566
258 Ga0501217_078836 3300049661 Bacteria 909
259 Ga0501257_003346 3300049686 Bacteria 3433
260 Ga0501225_0182141 3300049705 Bacteria 657
261 Ga0501045_0173934 3300049824 Bacteria 1604
262 nmdc:mga0qj67_809204_c1 3300050509 Bacteria 741
263 Ga0501084_0171615 3300054114 Bacteria 1831
264 2511701432 2511231119 Bacteria 4019861
265 2540608626 2540341094 Bacteria 4061186
266 2545557858 2545555800 Bacteria 4222588
267 2553395812 2551306519 Bacteria 5465154
268 2555468588 2554235283 Bacteria 3683090
269 2578932250 2576861599 Bacteria 4217202
270 2600199700 2599185353 Bacteria 2219443
271 2600402723 2600254943 Bacteria 2613887
272 2631983847 2630968484 Bacteria 3876276
273 2644702434 2643221729 Bacteria 6621700
274 2644715064 2643221730 Bacteria 6523787
275 2644720455 2643221731 Bacteria 5623886
276 2644726460 2643221732 Bacteria 5756404
277 2644738615 2643221735 Bacteria 3676263
278 2651531042 2648501850 Bacteria 3975476
279 2672338666 2671180330 Bacteria 5521719
280 2674421631 2671180844 Bacteria 4164150
281 2685153289 2684622632 Bacteria 5380049
282 2686998728 2684623153 Bacteria 3878815
283 2687500004 2687453109 Bacteria 3860091
284 2695629387 2695420354 Bacteria 3922431
285 2698319904 2695420987 Bacteria 6152737
286 2705997206 2703719227 Bacteria 5631989
287 2717914917 2716884898 Bacteria 3928789
288 2721508449 2718218445 Bacteria 5113413
289 2738813635 2738541295 Bacteria 5730091
290 2738839123 2738541299 Bacteria 4020721
291 2739156905 2738541358 Bacteria 5932299
292 2739209345 2738543006 Bacteria 5904091
293 2739232365 2738543010 Bacteria 5583595
294 2808870728 2808606364 Bacteria 4465927
295 2809053768 2808606399 Bacteria 4021018
296 2812313917 2811994870 Bacteria 3776934
297 2816865410 2816332186 Bacteria 5331395
298 2817482034 2816332295 Bacteria 4352468
299 2819567375 2818991441 Bacteria 5062707
300 2819583612 2818991443 Bacteria 6598732
301 2819711044 2818991465 Bacteria 5388835
302 2819722927 2818991468 Bacteria 3723169
303 2823529951 2823526263 Bacteria 3765752
304 2842687517 2842682962 Bacteria 5589973
305 2842886395 2842882022 Bacteria 6158489
306 2849142929 2849139964 Bacteria 5613304
307 2857583199 2857581216 Bacteria 5522813
308 2860841439 2860837431 Bacteria 4202080
309 2877772311 2877768649 Bacteria 3957164
310 2880173161 2880169592 Bacteria 3900066
311 2897113429 2897109615 Bacteria 4009619
312 2904528808 2904524088 Bacteria 5887454
313 2904561752 2904560550 Bacteria 4029838
314 2908667198 2908665501 Bacteria 3678115
315 2919094786 2919093281 Bacteria 3660974
316 2919148438 2919143609 Bacteria 6219228
317 2919416088 2919414237 Bacteria 5429133
318 2919521793 2919517244 Bacteria 5858162
319 2919724923 2919720352 Bacteria 5986006
320 2919727356 2919726948 Bacteria 3696050
321 2928098216 2928093941 Bacteria 5965005
322 2929007650 2929004312 Bacteria 5678476
323 2929239000 2929233124 Bacteria 5948380
324 2936363309 2936361878 Bacteria 5632809
325 2938923222 2938917290 Bacteria 5914775
326 2947432091 2947426588 Bacteria 5357194
327 2954776625 2954773129 Bacteria 3741715
328 2956902382 2956897341 Bacteria 5447711
329 2960321377 2960319331 Bacteria 5502575
330 2960378645 2960375949 Bacteria 5361395
331 2962294680 2962290636 Bacteria 4072939
332 2964375418 2964375228 Bacteria 4909004
333 2965766619 2965761152 Bacteria 5806513
334 2969140607 2969136845 Bacteria 3923176
335 2969144875 2969141011 Bacteria 4118468
336 2969768572 2969765954 Bacteria 4216713
337 2969770918 2969770375 Bacteria 4271280
338 2971897003 2971893375 Bacteria 3929648
339 2977255004 2977254563 Bacteria 4828420
340 2979088982 2979083700 Bacteria 5894929
341 2980496442 2980492589 Bacteria 4072961
342 2990275988 2990275345 Bacteria 4887158
343 3001894464 3001892409 Bacteria 6328293
344 3006826694 3006826541 Bacteria 4678913
345 3006862462 3006858327 Bacteria 4317835
346 3006883155 3006879489 Bacteria 4064221
347 3006980463 3006978542 Bacteria 5328100
348 8022626807 8022621104 Bacteria 5241040
349 8022632535 8022630665 Bacteria 3886130
350 8022656897 8022653035 Bacteria 4035078
351 8022798861 8022792930 Bacteria 5693794
352 8022894425 8022893055 Bacteria 5300455
353 8022918463 8022914991 Bacteria 5584517
354 8023441470 8023438354 Bacteria 5779374
355 8023448991 8023444577 Bacteria 5661597
356 8051954075 8051952484 Bacteria 3926774
357 8052175850 8052174270 Bacteria 3881265
358 8054283776 8054280661 Bacteria 4232245
359 8057587749 8057582654 Bacteria 5218944
360 Ga0316575_10007007
361 JGI25159J45721_1011137
362 JGI25159J45721_1033654
363 JGI25151J46595_10041049
364 rootH2_10082408
365 rootL2_10124591
366 rootH1_10073586
367 Ga0006562J51391_1000330
368 Ga0055532_1001606
369 Ga0055528_1001055
370 Ga0070670_100336524
371 Ga0070666_10112582
372 Ga0070669_100096629
373 Ga0070669_100615952
374 Ga0070671_100005752
375 Ga0070672_100208494
376 Ga0070665_100092459
377 Ga0068870_10027160
378 Ga0070715_10304966
379 Ga0105251_10012088
380 Ga0105251_10038543
381 Ga0105244_10123380
382 Ga0105244_10328110
383 Ga0105250_10003794
384 Ga0105250_10075037
385 Ga0105250_10202636
386 Ga0105247_10003421
387 Ga0105243_10000209
388 Ga0105242_10003006
389 Ga0105249_10081999
390 Ga0105249_10113988
391 Ga0105246_10003326
392 Ga0105246_10101906
393 Ga0105246_10220020
394 Ga0157374_10073381
395 Ga0157378_10002375
396 Ga0157372_10278167
397 Ga0157377_10000894
398 Ga0157379_10479992
399 Ga0209147_100559
400 Ga0209147_102458
401 Ga0209673_1002651
402 Ga0209130_1002659
403 Ga0209130_1003205
404 Ga0209675_1012108
405 Ga0209025_1000011
406 Ga0209025_1001513
407 Ga0209025_1002114
408 Ga0209025_1015385
409 Ga0209025_1027738
410 Ga0209025_1044172
411 Ga0207426_1005835
412 Ga0207696_1001795
413 Ga0207696_1007357
414 Ga0207696_1007985
415 Ga0207696_1009795
416 Ga0207655_1006345
417 Ga0207655_1008021
418 Ga0207713_1002687
419 Ga0207713_1027455
420 Ga0207713_1075891
421 Ga0207680_10079755
422 Ga0207685_10250967
423 Ga0207643_10172542
424 Ga0207681_10215981
425 Ga0207650_10520984
426 Ga0207644_10040383
427 Ga0207709_10013650
428 Ga0207709_10117463
429 Ga0207691_10115239
430 Ga0207712_10083992
431 Ga0209371_1001260
432 Ga0268266_10239807
433 Ga0268256_1001100
434 Ga0307408_100009692
435 Ga0307408_100287552
436 Ga0316575_10042867
437 Ga0316579_10208065
438 Ga0316576_10015002
439 Ga0316576_10015468
440 Ga0316576_10258051
441 Ga0316578_10021345
442 Ga0307405_10203975
443 Ga0316577_10009647
444 Ga0316577_10050904
445 Ga0316577_10111612
446 Ga0307416_100240370
447 Ga0316583_10009337
448 Ga0316583_10186413
449 Ga0316585_10003952
450 Ga0316585_10016953
451 Ga0316585_10176246
452 Ga0316580_10001739
453 Ga0316580_10024293
454 Ga0316580_10101959
455 Ga0316593_10006767
456 Ga0316593_10016424
457 Ga0316593_10017497
458 Ga0316593_10019118
459 Ga0316593_10021765
460 Ga0316593_10024118
461 Ga0316593_10025789
462 Ga0316593_10030439
463 Ga0316593_10033052
464 Ga0316593_10037221
465 Ga0316593_10112525
466 Ga0316593_10113319
467 Ga0316593_10126720
468 Ga0316592_1008334
469 Ga0316596_1000728
470 Ga0316596_1011431
471 Ga0316596_1091443
472 Ga0316574_0004934
473 Ga0316582_0063724
474 Ga0316582_0319956
475 Ga0316582_0416941
476 Ga0395900_0580812
477 Ga0395898_0802118
478 Ga0436364_0181412
479 Ga0436365_0126880
480 Ga0436360_0477784
481 Ga0436362_1137858
482 Ga0453684_0000055
483 Ga0453684_0012559
484 Ga0453684_0203315
485 Ga0453684_0482410
486 Ga0466967_0000079
487 Ga0466967_1068047
488 Ga0495627_083477
489 Ga0495631_0049303
490 Ga0495622_0014090
491 Ga0495661_0020047
492 Ga0495661_0131210
493 Ga0495588_0229657
494 Ga0495589_0039021
495 Ga0495660_0112543
496 Ga0495683_0009121
497 Ga0496100_0000719
498 Ga0496101_0109983
499 Ga0496101_0400984
500 Ga0496102_0006486
501 Ga0496103_0008061
502 Ga0496104_0024410
503 Ga0496105_0008252
504 Ga0496106_0001720
505 Ga0496107_0000182
506 Ga0496108_0001556
507 Ga0496109_0001672
508 Ga0496109_0583220
509 Ga0496110_0000418
510 Ga0496110_0002417
511 Ga0496110_0184431
512 Ga0496110_0271931
513 Ga0496111_0001952
514 Ga0496111_0007715
515 Ga0496112_0136624
516 Ga0496113_0007351
517 Ga0496113_0163884
518 Ga0496114_0068783
519 Ga0496116_0016317
520 Ga0496117_0033820
521 Ga0496118_0042608
522 Ga0496119_0001218
523 Ga0496121_0100344
524 Ga0496122_0008847
525 Ga0496124_0022313
526 Ga0496125_0018619
527 Ga0496126_0016160
528 Ga0501306_003579
529 Ga0501308_005017
530 Ga0501309_001906
531 Ga0501310_000800
532 Ga0501341_09660
533 Ga0501343_000250
534 Ga0501343_008649
535 Ga0501305_000476
536 Ga0501305_013148
537 Ga0501305_013916
538 Ga0501305_016631
539 Ga0501305_018650
540 Ga0501307_000777
541 Ga0501307_002157
542 Ga0501307_026909
543 Ga0501307_042729
544 Ga0501311_005180
545 Ga0501311_037457
546 Ga0501312_000183
547 Ga0501312_000254
548 Ga0501312_004852
549 Ga0501312_005887
550 Ga0501312_016403
551 Ga0501313_004144
552 Ga0501313_005030
553 Ga0501313_006092
554 Ga0501313_006683
555 Ga0501314_011993
556 Ga0501315_000595
557 Ga0501315_015372
558 Ga0501315_016806
559 Ga0501315_017496
560 Ga0501315_026113
561 Ga0501316_000517
562 Ga0501316_001599
563 Ga0501316_002172
564 Ga0501316_022264
565 Ga0501317_000090
566 Ga0501317_000222
567 Ga0501317_000445
568 Ga0501317_002952
569 Ga0501317_018348
570 Ga0501317_020032
571 Ga0501317_022865
572 Ga0501318_003876
573 Ga0501318_004202
574 Ga0501318_010260
575 Ga0501319_001574
576 Ga0501319_001858
577 Ga0501320_003234
578 Ga0501320_009880
579 Ga0501321_000125
580 Ga0501321_001766
581 Ga0501321_002966
582 Ga0501321_012684
583 Ga0501321_035273
584 Ga0501322_000091
585 Ga0501322_000870
586 Ga0501322_003020
587 Ga0501322_003059
588 Ga0501322_013006
589 Ga0501323_000257
590 Ga0501323_001260
591 Ga0501323_042259
592 Ga0501324_001701
593 Ga0501324_004439
594 Ga0501326_00787
595 Ga0501326_03598
596 Ga0501328_01262
597 Ga0501330_000063
598 Ga0501330_001957
599 Ga0501330_011641
600 Ga0501331_00078
601 Ga0501332_01878
602 Ga0501332_02070
603 Ga0501332_03323
604 Ga0501333_001359
605 Ga0501333_002281
606 Ga0501334_01908
607 Ga0501334_05006
608 Ga0501334_09989
609 Ga0501335_004557
610 Ga0501335_012619
611 Ga0501337_001298
612 Ga0501337_004895
613 Ga0501071_0299372
614 Ga0501076_0122976
615 Ga0501199_006616
616 Ga0501208_005441
617 Ga0501217_078836
618 Ga0501257_003346
619 Ga0501225_0182141
620 Ga0501045_0173934
621 nmdc:mga0qj67_809204_c1
622 Ga0501084_0171615
623 2511701432
624 2540608626
625 2545557858
626 2553395812
627 2555468588
628 2578932250
629 2600199700
630 2600402723
631 2631983847
632 2644702434
633 2644715064
634 2644720455
635 2644726460
636 2644738615
637 2651531042
638 2672338666
639 2674421631
640 2685153289
641 2686998728
642 2687500004
643 2695629387
644 2698319904
645 2705997206
646 2717914917
647 2721508449
648 2738813635
649 2738839123
650 2739156905
651 2739209345
652 2739232365
653 2808870728
654 2809053768
655 2812313917
656 2816865410
657 2817482034
658 2819567375
659 2819583612
660 2819711044
661 2819722927
662 2823529951
663 2842687517
664 2842886395
665 2849142929
666 2857583199
667 2860841439
668 2877772311
669 2880173161
670 2897113429
671 2904528808
672 2904561752
673 2908667198
674 2919094786
675 2919148438
676 2919416088
677 2919521793
678 2919724923
679 2919727356
680 2928098216
681 2929007650
682 2929239000
683 2936363309
684 2938923222
685 2947432091
686 2954776625
687 2956902382
688 2960321377
689 2960378645
690 2962294680
691 2964375418
692 2965766619
693 2969140607
694 2969144875
695 2969768572
696 2969770918
697 2971897003
698 2977255004
699 2979088982
700 2980496442
701 2990275988
702 3001894464
703 3006826694
704 3006862462
705 3006883155
706 3006980463
707 8022626807
708 8022632535
709 8022656897
710 8022798861
711 8022894425
712 8022918463
713 8023441470
714 8023448991
715 8051954075
716 8052175850
717 8054283776
718 8057587749

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00265

TK

Thymidine kinase

20

198

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xx6-assembly1.cif.gz_A x-ray structure of clostridium acetobutylicum thymidine kinase with adp. northeast structural genomics target car26. 0.9744 6 189
2ja1-assembly1.cif.gz_A thymidine kinase from b. cereus with ttp bound as phosphate donor. 0.9612 1 189
1xx6-assembly1.cif.gz_B x-ray structure of clostridium acetobutylicum thymidine kinase with adp. northeast structural genomics target car26. 0.9609 6 189
1xx6-assembly1.cif.gz_A x-ray structure of clostridium acetobutylicum thymidine kinase with adp. northeast structural genomics target car26. 0.9475 6 189
2qpo-assembly1.cif.gz_D thermotoga maritima thymidine kinase in the apo form 0.9451 8 185
ID Description Score Start End Superfamily
af_Q2FWD9_1_141_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9514 1 139 3.40.50.300
2qpoC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9393 8 138 3.40.50.300
2ja1A02 Alpha Beta;2-Layer Sandwich;Wheat Germ Agglutinin (Isolectin 2); domain 1; 0.9347 140 189 3.30.60.20
2wvjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9334 8 139 3.40.50.300
af_Q2FWD9_1_141_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9315 1 139 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A357F307-F1-model_v4 Thymidine kinase (EC 2.7.1.21) 0.9914 7 152 GO:0004797
GO:0005524
GO:0005829
GO:0046104
GO:0071897
AF-A0A0A7E2M2-F1-model_v4 Thymidine kinase (EC 2.7.1.21) 0.9912 20 118 GO:0004797
GO:0005524
GO:0005829
GO:0046104
GO:0071897
AF-A0A7C3NIT5-F1-model_v4 Thymidine kinase (EC 2.7.1.21) 0.9893 7 192 GO:0004797
GO:0005524
GO:0005829
GO:0008270
GO:0046104
GO:0071897
AF-A0A7Z9WKE2-F1-model_v4 Thymidine kinase (EC 2.7.1.21) 0.9889 63 190 GO:0004797
GO:0005524
GO:0005829
GO:0046104
GO:0071897
AF-A0A536I1Q3-F1-model_v4 Thymidine kinase (EC 2.7.1.21) 0.9884 17 191 GO:0004797
GO:0005524
GO:0005829
GO:0008270
GO:0046104
GO:0071897

Map