F420676

General Info

Members Datasets Scaffolds Average Seq Length
356 249 329 201

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2863404153|2863407323
Length 198
Sequence SDTNEGASGTDEVLAGVGPRLRRIRKEREATLAGLSEATGISVSTLSRLESGLRKPSLELLLPIARAHQVPLDELIGEPPVGDPRVRSKPIQRHGRTYWPLTRQPGGLQAFKVRVEPQGRQEPEPRTHEGYEWLYVMSGKLRVVLGEHDVVMVAGEAAEFDTRVPHWFGAAGEEPVEFLSLFGPQGERMHVRARPARS

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
3 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
4 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
5 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
6 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
7 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
8 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
9 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
10 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
11 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
12 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
13 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
14 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
15 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
16 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
17 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
18 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
19 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
20 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
21 2919395869 Microbacterium resistens 2980 Isolate Unclassified
22 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
23 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
24 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
25 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
26 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
27 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
28 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
29 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
30 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
31 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
33 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
34 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
35 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
39 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
50 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
51 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
59 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
63 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
64 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
84 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
85 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
86 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
87 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
90 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
93 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
94 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
95 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
96 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
99 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
100 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
101 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
102 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
103 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
115 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
116 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
117 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
118 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
119 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
120 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
121 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
122 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
123 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
124 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
125 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
126 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
129 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
130 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
131 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
132 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
133 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
134 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
135 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
136 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
137 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
138 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
139 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
142 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
143 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
144 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
145 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
146 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
147 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
148 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
149 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
150 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
151 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
152 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
153 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
154 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
155 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
156 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
157 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
158 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
159 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
160 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
161 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
162 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
163 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
164 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
165 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
166 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
167 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
168 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
169 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
170 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
171 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
172 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
173 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
174 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
175 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
176 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
177 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
178 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
179 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
180 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
181 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
182 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
183 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
184 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
185 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
186 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
187 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
188 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
189 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
190 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
191 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
192 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
193 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
194 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
195 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
196 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
197 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
198 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
199 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
200 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
201 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
202 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
203 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
204 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
205 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
206 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
207 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
208 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
209 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
210 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
211 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
212 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
213 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
214 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
215 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
216 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
217 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
218 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
219 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
220 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
221 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
222 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
223 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
224 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
225 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
226 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
227 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
228 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
229 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
230 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
231 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
232 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
233 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
234 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
235 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
236 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
237 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
238 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
239 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
240 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
241 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
242 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
243 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
244 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
245 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
246 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
247 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
248 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
249 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.29
Metatranscriptomes 1.12
Isolates 7.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.74
Nodule 0.56
Rhizoplane 1.97
Rhizosphere 80.9
Stem 0
Stem Tuber 0
Unclassified 9.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10013443 3300001989 Bacteria 2989
2 JGI24737J22298_10008637 3300001990 Bacteria 3407
3 JGI24735J21928_10002072 3300002067 Bacteria 7065
4 JGI24738J21930_10022864 3300002075 Bacteria 1291
5 JGI25152J39213_1000271 3300002773 Bacteria 34638
6 JGI25406J46586_10040802 3300003203 Bacteria 1641
7 Ga0006562J51391_1054542 3300003578 Bacteria 11229
8 Ga0006562J51391_1054545 3300003578 Bacteria 3902
9 Ga0070658_10000065 3300005327 Bacteria 104621
10 Ga0070709_10091119 3300005434 Bacteria 2011
11 Ga0070710_10111637 3300005437 Bacteria 1643
12 Ga0070710_10116606 3300005437 Bacteria 1611
13 Ga0070663_100036018 3300005455 Bacteria 3437
14 Ga0070663_100170756 3300005455 Bacteria 1681
15 Ga0070707_100118634 3300005468 Bacteria 2568
16 Ga0070698_100044102 3300005471 Bacteria 4568
17 Ga0070679_100462076 3300005530 Bacteria 1214
18 Ga0068855_100193662 3300005563 Bacteria 2291
19 Ga0068856_100851439 3300005614 Bacteria 931
20 Ga0068864_100232112 3300005618 Bacteria 1707
21 Ga0068861_100510863 3300005719 Bacteria 1088
22 Ga0068863_100102080 3300005841 Bacteria 2727
23 Ga0081539_10000212 3300005985 Bacteria 136183
24 Ga0075364_10023573 3300006051 Bacteria 3897
25 Ga0070716_100129153 3300006173 Bacteria 1595
26 Ga0070712_100175604 3300006175 Bacteria 1665
27 Ga0075367_10002565 3300006178 Bacteria 8342
28 Ga0075367_10389431 3300006178 Bacteria 881
29 Ga0105244_10035075 3300009036 Bacteria 2637
30 Ga0105250_10220595 3300009092 Bacteria 804
31 Ga0105243_10003349 3300009148 Bacteria 13000
32 Ga0105248_12105509 3300009177 Bacteria 642
33 Ga0157371_10141177 3300013102 Bacteria 1715
34 Ga0157370_10172964 3300013104 Bacteria 2007
35 Ga0157372_10251289 3300013307 Bacteria 2052
36 Ga0182008_10000354 3300014497 Bacteria 35740
37 Ga0182008_10221202 3300014497 Bacteria 969
38 Ga0182006_1040753 3300015261 Bacteria 1826
39 Ga0182007_10001371 3300015262 Bacteria 13103
40 Ga0206353_11032136 3300020082 Bacteria 1341
41 Ga0213875_10015490 3300021388 Bacteria 3710
42 Ga0213875_10077811 3300021388 Bacteria 1548
43 Ga0207425_1007684 3300025245 Bacteria 2819
44 Ga0209129_1000052 3300025258 Bacteria 265251
45 Ga0209025_1000570 3300025294 Bacteria 67028
46 Ga0209758_1005912 3300025297 Bacteria 9100
47 Ga0207426_1010599 3300025302 Bacteria 3569
48 Ga0209051_1026859 3300025303 Bacteria 2309
49 Ga0207692_10211879 3300025898 Bacteria 1144
50 Ga0207647_10030079 3300025904 Bacteria 3508
51 Ga0207705_10000001 3300025909 Bacteria 2061880
52 Ga0207684_10080363 3300025910 Bacteria 2773
53 Ga0207693_10039014 3300025915 Bacteria 3739
54 Ga0207693_10088277 3300025915 Bacteria 2430
55 Ga0207663_10358876 3300025916 Bacteria 1105
56 Ga0207657_10215701 3300025919 Bacteria 1539
57 Ga0207646_10221802 3300025922 Bacteria 1708
58 Ga0207664_10270633 3300025929 Bacteria 1488
59 Ga0207709_10010311 3300025935 Bacteria 5147
60 Ga0207665_10196322 3300025939 Bacteria 1469
61 Ga0207689_10154012 3300025942 Bacteria 1895
62 Ga0207661_10613281 3300025944 Bacteria 999
63 Ga0207639_10239464 3300026041 Bacteria 1577
64 Ga0207678_10012731 3300026067 Bacteria 7386
65 Ga0209813_10071906 3300027866 Bacteria 1126
66 Ga0307517_10015621 3300028786 Bacteria 10070
67 Ga0307515_10089689 3300028794 Bacteria 3867
68 Ga0307511_10036592 3300030521 Bacteria 4258
69 Ga0307512_10006485 3300030522 Bacteria 11847
70 Ga0307513_10060728 3300031456 Bacteria 4006
71 Ga0307513_10070911 3300031456 Bacteria 3639
72 Ga0307508_10029268 3300031616 Bacteria 4980
73 Ga0307508_10036928 3300031616 Bacteria 4397
74 Ga0307508_10064577 3300031616 Bacteria 3227
75 Ga0307514_10148246 3300031649 Bacteria 1580
76 Ga0307516_10324214 3300031730 Bacteria 1211
77 Ga0307518_10153450 3300031838 Bacteria 1591
78 Ga0307507_10006886 3300033179 Bacteria 16958
79 Ga0307510_10000606 3300033180 Bacteria 36344
80 Ga0373944_0057533 3300035089 Bacteria 1239
81 Ga0373923_0005734 3300035111 Bacteria 4236
82 Ga0373936_0000325 3300035113 Bacteria 16126
83 Ga0373945_0000021 3300035116 Bacteria 32047
84 Ga0373953_0080639 3300035117 Bacteria 1352
85 Ga0373956_0181914 3300035119 Bacteria 994
86 Ga0373943_0000066 3300035170 Bacteria 36871
87 Ga0373946_0000019 3300035171 Bacteria 44508
88 Ga0373946_0329755 3300035171 Bacteria 760
89 Ga0373955_0246843 3300035172 Bacteria 1070
90 Ga0373935_0212011 3300035692 Bacteria 1342
91 Ga0373927_0000402 3300035695 Bacteria 33457
92 Ga0373947_0000197 3300035725 Bacteria 33311
93 Ga0373937_0223863 3300036401 Bacteria 1771
94 Ga0372808_004271 3300036459 Bacteria 1812
95 Ga0373925_0032044 3300037068 Bacteria 3866
96 Ga0395900_0035175 3300037418 Bacteria 5160
97 Ga0395900_0400091 3300037418 Bacteria 1338
98 Ga0395898_0002245 3300037466 Bacteria 23480
99 Ga0395898_0009484 3300037466 Bacteria 10219
100 Ga0436364_0602824 3300037853 Bacteria 4303
101 Ga0436364_0952118 3300037853 Bacteria 3881
102 Ga0395901_1063268 3300038443 Bacteria 782
103 Ga0439436_0007816 3300041404 Bacteria 3287
104 Ga0451841_0218227 3300041498 Bacteria 1019
105 Ga0451853_0783321 3300041512 Bacteria 813
106 Ga0451853_2765009 3300041512 Bacteria 2177
107 Ga0439433_0004795 3300041999 Bacteria 2906
108 Ga0439442_057015 3300042002 Bacteria 826
109 Ga0439442_062497 3300042002 Bacteria 790
110 Ga0439449_0013474 3300042007 Bacteria 3077
111 Ga0439449_0072362 3300042007 Bacteria 1270
112 Ga0439457_001901 3300042014 Bacteria 6156
113 Ga0450894_000359 3300042131 Bacteria 7962
114 Ga0450896_001488 3300042133 Bacteria 2893
115 Ga0450898_000065 3300042134 Bacteria 9260
116 Ga0450899_000112 3300042135 Bacteria 7275
117 Ga0450906_000110 3300042145 Bacteria 14078
118 Ga0439458_0012694 3300042157 Bacteria 1893
119 Ga0439458_0024224 3300042157 Bacteria 1418
120 Ga0466972_0003080 3300044658 Bacteria 8260
121 Ga0466972_0007660 3300044658 Bacteria 5420
122 Ga0466972_0052028 3300044658 Bacteria 1975
123 Ga0466965_0057665 3300044683 Bacteria 1936
124 Ga0466965_0177894 3300044683 Bacteria 1121
125 Ga0466966_0000910 3300044684 Bacteria 18804
126 Ga0466966_0003789 3300044684 Bacteria 9974
127 Ga0466961_0002170 3300044693 Bacteria 12207
128 Ga0466961_0005393 3300044693 Bacteria 8050
129 Ga0466961_0167502 3300044693 Bacteria 1367
130 Ga0466963_0005694 3300044694 Bacteria 7321
131 Ga0466963_0005901 3300044694 Bacteria 7216
132 Ga0466963_0062791 3300044694 Bacteria 2485
133 Ga0466963_0144909 3300044694 Bacteria 1647
134 Ga0466964_0034993 3300044706 Bacteria 2006
135 Ga0466971_0000214 3300044719 Bacteria 22434
136 Ga0466971_0020525 3300044719 Bacteria 2937
137 Ga0466971_0084188 3300044719 Bacteria 1452
138 Ga0466968_0066163 3300044735 Bacteria 1565
139 Ga0466970_0001091 3300044765 Bacteria 13165
140 Ga0466957_0000451 3300044842 Bacteria 20318
141 Ga0466960_0127028 3300044901 Bacteria 1341
142 Ga0466959_0069373 3300045049 Bacteria 2554
143 Ga0466958_0001739 3300045836 Bacteria 10528
144 Ga0466958_0118383 3300045836 Bacteria 1657
145 Ga0466967_0004578 3300045976 Bacteria 9370
146 Ga0466967_0125657 3300045976 Bacteria 2375
147 Ga0466967_0236939 3300045976 Bacteria 1739
148 Ga0466967_0286955 3300045976 Bacteria 1580
149 Ga0495617_011946 3300046452 Bacteria 2962
150 Ga0495627_014237 3300046453 Bacteria 2781
151 Ga0495603_0011134 3300046455 Bacteria 5451
152 Ga0495603_0015780 3300046455 Bacteria 4567
153 Ga0495603_0024036 3300046455 Bacteria 3686
154 Ga0495590_0195910 3300046457 Bacteria 741
155 Ga0495629_0007664 3300046459 Bacteria 7948
156 Ga0495629_0009828 3300046459 Bacteria 6980
157 Ga0495629_0093887 3300046459 Bacteria 2093
158 Ga0495629_0213356 3300046459 Bacteria 1333
159 Ga0495629_0287570 3300046459 Bacteria 1127
160 Ga0495638_0124478 3300046460 Bacteria 1520
161 Ga0495641_0001922 3300046461 Bacteria 16966
162 Ga0495651_0016024 3300046462 Bacteria 5806
163 Ga0495653_0000497 3300046463 Bacteria 30342
164 Ga0495605_0006404 3300046474 Bacteria 6774
165 Ga0495639_0069759 3300046475 Bacteria 1622
166 Ga0495639_0187370 3300046475 Bacteria 1009
167 Ga0495639_0203287 3300046475 Bacteria 970
168 Ga0495662_0013428 3300046476 Bacteria 3986
169 Ga0495662_0022528 3300046476 Bacteria 3041
170 Ga0495662_0047765 3300046476 Bacteria 2066
171 Ga0495662_0094878 3300046476 Bacteria 1457
172 Ga0495664_0000137 3300046477 Bacteria 36467
173 Ga0495585_0021677 3300046492 Bacteria 3688
174 Ga0495594_0018906 3300046499 Bacteria 3656
175 Ga0495594_0020588 3300046499 Bacteria 3514
176 Ga0495594_0022580 3300046499 Bacteria 3366
177 Ga0495596_0156458 3300046500 Bacteria 885
178 Ga0495607_0073305 3300046501 Bacteria 1903
179 Ga0495583_0030398 3300046506 Bacteria 2630
180 Ga0495583_0061202 3300046506 Bacteria 1680
181 Ga0495606_0004135 3300046507 Bacteria 14728
182 Ga0495608_0057453 3300046511 Bacteria 2568
183 Ga0495610_0050949 3300046512 Bacteria 2018
184 Ga0495616_0141774 3300046513 Bacteria 1093
185 Ga0495618_0053720 3300046514 Bacteria 2547
186 Ga0495618_0075874 3300046514 Bacteria 2141
187 Ga0495618_0376542 3300046514 Bacteria 871
188 Ga0495620_0001985 3300046515 Bacteria 11960
189 Ga0495620_0003171 3300046515 Bacteria 9434
190 Ga0495628_0145148 3300046516 Bacteria 1809
191 Ga0495628_0225187 3300046516 Bacteria 1407
192 Ga0495628_0275950 3300046516 Bacteria 1249
193 Ga0495630_0019073 3300046517 Bacteria 5041
194 Ga0495631_0068872 3300046518 Bacteria 1530
195 Ga0495632_0033081 3300046519 Bacteria 2658
196 Ga0495637_0162411 3300046520 Bacteria 837
197 Ga0495643_0008966 3300046522 Bacteria 6284
198 Ga0495666_0044265 3300046526 Bacteria 2149
199 Ga0495652_0023306 3300046529 Bacteria 5489
200 Ga0495652_0074795 3300046529 Bacteria 2816
201 Ga0495640_0021760 3300046533 Bacteria 4698
202 Ga0495609_0008520 3300046538 Bacteria 5019
203 Ga0495597_0184200 3300046542 Bacteria 842
204 Ga0495633_0012489 3300046558 Bacteria 4514
205 Ga0495667_0001672 3300046559 Bacteria 14712
206 Ga0495668_0082580 3300046616 Bacteria 1762
207 Ga0495634_0016690 3300046642 Bacteria 5246
208 Ga0495611_0217422 3300046648 Bacteria 889
209 Ga0495625_0004570 3300046660 Bacteria 13017
210 Ga0495625_0097252 3300046660 Bacteria 2026
211 Ga0495635_0000528 3300046663 Bacteria 24259
212 Ga0495588_0172691 3300046674 Bacteria 1143
213 Ga0495588_0184131 3300046674 Bacteria 1103
214 Ga0495588_0343186 3300046674 Bacteria 785
215 Ga0495657_0004263 3300046675 Bacteria 11436
216 Ga0495657_0047474 3300046675 Bacteria 2902
217 Ga0495657_0137923 3300046675 Bacteria 1522
218 Ga0495657_0330536 3300046675 Bacteria 904
219 Ga0495599_0021203 3300046678 Bacteria 4053
220 Ga0495623_0125569 3300046679 Bacteria 1541
221 Ga0495646_0069636 3300046680 Bacteria 2075
222 Ga0495613_0015943 3300046689 Bacteria 5595
223 Ga0495613_0017042 3300046689 Bacteria 5408
224 Ga0495613_0050279 3300046689 Bacteria 3074
225 Ga0495613_0398079 3300046689 Bacteria 939
226 Ga0495624_0001683 3300046690 Bacteria 16940
227 Ga0495670_0182358 3300046691 Bacteria 1109
228 Ga0495671_0005690 3300046692 Bacteria 7271
229 Ga0495671_0040924 3300046692 Bacteria 2336
230 Ga0495649_0049066 3300046694 Bacteria 2293
231 Ga0495649_0125416 3300046694 Bacteria 1356
232 Ga0495589_0014912 3300046794 Bacteria 3999
233 Ga0495589_0019666 3300046794 Bacteria 3457
234 Ga0495589_0061349 3300046794 Bacteria 1846
235 Ga0495600_0449669 3300046809 Bacteria 797
236 Ga0495581_0020477 3300047315 Bacteria 3838
237 Ga0495581_0110257 3300047315 Bacteria 1600
238 Ga0495604_0254625 3300047317 Bacteria 1195
239 Ga0495636_0001198 3300047318 Bacteria 9801
240 Ga0495636_0007696 3300047318 Bacteria 4237
241 Ga0495636_0021216 3300047318 Bacteria 2622
242 Ga0495636_0026397 3300047318 Bacteria 2363
243 Ga0495674_0000418 3300047319 Bacteria 38152
244 Ga0495674_0207192 3300047319 Bacteria 1625
245 Ga0495676_0003221 3300047321 Bacteria 14746
246 Ga0495676_0052209 3300047321 Bacteria 3265
247 Ga0495680_0020649 3300047322 Bacteria 5533
248 Ga0495680_0031979 3300047322 Bacteria 4276
249 Ga0495687_031104 3300047443 Bacteria 2451
250 Ga0495687_048495 3300047443 Bacteria 1821
251 Ga0495687_078599 3300047443 Bacteria 1299
252 Ga0495687_139670 3300047443 Bacteria 844
253 Ga0495675_0011018 3300047444 Bacteria 5668
254 Ga0495675_0033930 3300047444 Bacteria 3258
255 Ga0495677_0030326 3300047445 Bacteria 1968
256 Ga0495685_003372 3300047447 Bacteria 5094
257 Ga0495685_009584 3300047447 Bacteria 3239
258 Ga0495685_019861 3300047447 Bacteria 2309
259 Ga0495673_0150082 3300047469 Bacteria 902
260 Ga0495684_0002229 3300047471 Bacteria 15526
261 Ga0495684_0241921 3300047471 Bacteria 1316
262 Ga0495686_0074554 3300047472 Bacteria 2082
263 Ga0495593_0037432 3300047673 Bacteria 2624
264 Ga0495593_0045198 3300047673 Bacteria 2351
265 Ga0495602_0197814 3300048088 Bacteria 1536
266 Ga0495614_0061124 3300048089 Bacteria 1618
267 Ga0495614_0150619 3300048089 Bacteria 1037
268 Ga0495626_0055189 3300048091 Bacteria 1822
269 Ga0496102_0003399 3300048905 Bacteria 13493
270 Ga0496104_0118770 3300048907 Bacteria 2539
271 Ga0496109_0044434 3300048912 Bacteria 4031
272 Ga0496109_0347636 3300048912 Bacteria 1401
273 Ga0496110_0795770 3300048913 Bacteria 850
274 Ga0496112_0153799 3300048915 Bacteria 2268
275 Ga0496115_0852220 3300048918 Bacteria 706
276 Ga0496117_0005329 3300048920 Bacteria 13579
277 Ga0495682_0030640 3300049460 Bacteria 1990
278 Ga0501031_0061144 3300049568 Bacteria 2455
279 Ga0501031_0391480 3300049568 Bacteria 899
280 Ga0501032_0059291 3300049569 Bacteria 2569
281 Ga0501033_0007029 3300049570 Bacteria 8791
282 Ga0501033_0011690 3300049570 Bacteria 6712
283 Ga0501034_0019487 3300049571 Bacteria 6938
284 Ga0501034_0115306 3300049571 Bacteria 2675
285 Ga0501034_0563669 3300049571 Bacteria 1047
286 Ga0501036_0004943 3300049572 Bacteria 10776
287 Ga0501036_0012715 3300049572 Bacteria 6983
288 Ga0501037_0019319 3300049573 Bacteria 5025
289 Ga0501037_0115041 3300049573 Bacteria 1936
290 Ga0501037_0124928 3300049573 Bacteria 1848
291 Ga0501038_0004272 3300049574 Bacteria 13284
292 Ga0501038_0009874 3300049574 Bacteria 8738
293 Ga0501039_0048359 3300049575 Bacteria 3288
294 Ga0501039_0166650 3300049575 Bacteria 1732
295 Ga0501042_0046121 3300049578 Bacteria 3107
296 Ga0501043_0024473 3300049579 Bacteria 4738
297 Ga0501046_0248236 3300049580 Bacteria 1311
298 Ga0501046_0310571 3300049580 Bacteria 1150
299 Ga0501047_0024702 3300049581 Bacteria 5770
300 Ga0501047_0077957 3300049581 Bacteria 3186
301 Ga0501047_0077972 3300049581 Bacteria 3186
302 Ga0501047_0877419 3300049581 Bacteria 711
303 Ga0501048_0079831 3300049582 Bacteria 2309
304 Ga0501048_0489935 3300049582 Bacteria 881
305 Ga0501070_0394625 3300049586 Bacteria 1120
306 Ga0501080_0143758 3300049742 Bacteria 2205
307 Ga0501035_0021542 3300049822 Bacteria 5925
308 Ga0501035_0072473 3300049822 Bacteria 3049
309 Ga0501035_0095057 3300049822 Bacteria 2620
310 Ga0501035_0448067 3300049822 Bacteria 1068
311 Ga0501035_0976702 3300049822 Bacteria 667
312 Ga0501044_0000552 3300049823 Bacteria 45539
313 Ga0501044_0006366 3300049823 Bacteria 13052
314 Ga0501044_0187303 3300049823 Bacteria 2033
315 nmdc:mga03n38_471_c1 3300050490 Bacteria 10071
316 nmdc:mga00v17_6602_c1 3300050491 Bacteria 6158
317 nmdc:mga00v17_90497_c1 3300050491 Bacteria 1921
318 nmdc:mga06z11_1652_c1 3300050494 Bacteria 8361
319 nmdc:mga04h51_7476_c1 3300050495 Bacteria 2885
320 nmdc:mga07m45_39419_c1 3300050496 Bacteria 2639
321 Ga0500643_000209 3300053087 Bacteria 55415
322 Ga0500650_0080666 3300053098 Bacteria 1522
323 Ga0500560_036731 3300053107 Bacteria 1514
324 Ga0500573_0064545 3300053140 Bacteria 2094
325 Ga0500573_0067245 3300053140 Bacteria 2048
326 Ga0500600_0044235 3300053149 Bacteria 2555
327 Ga0500600_0146764 3300053149 Bacteria 1179
328 Ga0466962_0000432 3300061719 Bacteria 18182
329 Ga0466962_0047517 3300061719 Bacteria 2051

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009177 Ga0105248_12105509 Ga0105248_121055091 166
2 3300053140 Ga0500573_0064545 Ga0500573_0064545_185_691 166
3 3300036401 Ga0373937_0223863 Ga0373937_0223863_435_1121 178
4 3300046529 Ga0495652_0023306 Ga0495652_0023306_1536_2237 178
5 3300025929 Ga0207664_10270633 Ga0207664_102706332 179
6 3300048907 Ga0496104_0118770 Ga0496104_0118770_1688_2392 180
7 3300048912 Ga0496109_0347636 Ga0496109_0347636_84_791 180
8 3300048915 Ga0496112_0153799 Ga0496112_0153799_298_1029 180
9 3300005618 Ga0068864_100232112 Ga0068864_1002321122 183
10 3300035089 Ga0373944_0057533 Ga0373944_0057533_32_601 183
11 3300035116 Ga0373945_0000021 Ga0373945_0000021_27861_28430 183
12 3300035692 Ga0373935_0212011 Ga0373935_0212011_759_1328 183
13 3300037068 Ga0373925_0032044 Ga0373925_0032044_3283_3852 183
14 3300005841 Ga0068863_100102080 Ga0068863_1001020803 185
15 3300025915 Ga0207693_10039014 Ga0207693_100390143 185
16 3300035119 Ga0373956_0181914 Ga0373956_0181914_74_832 185
17 3300005437 Ga0070710_10111637 Ga0070710_101116372 186
18 3300035111 Ga0373923_0005734 Ga0373923_0005734_3245_3922 186
19 3300035113 Ga0373936_0000325 Ga0373936_0000325_12224_12901 186
20 3300035117 Ga0373953_0080639 Ga0373953_0080639_390_1067 186
21 3300035170 Ga0373943_0000066 Ga0373943_0000066_2093_2770 186
22 3300035171 Ga0373946_0000019 Ga0373946_0000019_34603_35280 186
23 3300035172 Ga0373955_0246843 Ga0373955_0246843_52_729 186
24 3300035695 Ga0373927_0000402 Ga0373927_0000402_30063_30740 186
25 3300035725 Ga0373947_0000197 Ga0373947_0000197_27818_28495 186
26 3300036459 Ga0372808_004271 Ga0372808_004271_121_693 186
27 3300038443 Ga0395901_1063268 Ga0395901_1063268_19_600 186
28 3300046461 Ga0495641_0001922 Ga0495641_0001922_14756_15433 186
29 3300046463 Ga0495653_0000497 Ga0495653_0000497_752_1429 186
30 3300046475 Ga0495639_0069759 Ga0495639_0069759_32_640 186
31 3300046476 Ga0495662_0022528 Ga0495662_0022528_440_1117 186
32 3300046477 Ga0495664_0000137 Ga0495664_0000137_3208_3885 186
33 3300046514 Ga0495618_0053720 Ga0495618_0053720_145_822 186
34 3300046516 Ga0495628_0225187 Ga0495628_0225187_539_1216 186
35 3300046517 Ga0495630_0019073 Ga0495630_0019073_3228_3905 186
36 3300046559 Ga0495667_0001672 Ga0495667_0001672_1411_2088 186
37 3300046642 Ga0495634_0016690 Ga0495634_0016690_1626_2303 186
38 3300046663 Ga0495635_0000528 Ga0495635_0000528_3233_3910 186
39 3300046675 Ga0495657_0137923 Ga0495657_0137923_637_1314 186
40 3300046678 Ga0495599_0021203 Ga0495599_0021203_3217_3894 186
41 3300046680 Ga0495646_0069636 Ga0495646_0069636_1324_2001 186
42 3300046690 Ga0495624_0001683 Ga0495624_0001683_13020_13697 186
43 3300047315 Ga0495581_0020477 Ga0495581_0020477_273_950 186
44 3300047319 Ga0495674_0000418 Ga0495674_0000418_3230_3907 186
45 3300047321 Ga0495676_0003221 Ga0495676_0003221_11087_11764 186
46 3300047322 Ga0495680_0020649 Ga0495680_0020649_3251_3928 186
47 3300047471 Ga0495684_0002229 Ga0495684_0002229_3124_3801 186
48 iso_pu_bacteria 2904765812 2904766726 186
49 iso_pu_bacteria 2904770941 2904775262 186
50 iso_pu_bacteria 2908811453 2908811690 186
51 iso_pu_bacteria 2919420072 2919420838 186
52 iso_pu_bacteria 2919432681 2919433404 186
53 3300001990 JGI24737J22298_10008637 JGI24737J22298_100086372 187
54 3300002067 JGI24735J21928_10002072 JGI24735J21928_100020726 187
55 3300003578 Ga0006562J51391_1054542 Ga0006562J51391_105454210 187
56 3300003578 Ga0006562J51391_1054545 Ga0006562J51391_10545453 187
57 3300005530 Ga0070679_100462076 Ga0070679_1004620762 187
58 3300006051 Ga0075364_10023573 Ga0075364_100235732 187
59 3300021388 Ga0213875_10077811 Ga0213875_100778113 187
60 3300025944 Ga0207661_10613281 Ga0207661_106132812 187
61 3300037853 Ga0436364_0602824 Ga0436364_0602824_1787_2365 187
62 3300044694 Ga0466963_0144909 Ga0466963_0144909_374_964 187
63 3300045976 Ga0466967_0004578 Ga0466967_0004578_4532_5122 187
64 3300048920 Ga0496117_0005329 Ga0496117_0005329_11309_11884 187
65 3300050491 nmdc:mga00v17_6602_c1 nmdc:mga00v17_6602_c1_3964_4551 187
66 3300050491 nmdc:mga00v17_90497_c1 nmdc:mga00v17_90497_c1_1159_1746 187
67 3300050496 nmdc:mga07m45_39419_c1 nmdc:mga07m45_39419_c1_860_1447 187
68 iso_pu_bacteria 2515154088 2515494930 187
69 iso_pu_bacteria 2515154129 2515718932 187
70 iso_pu_bacteria 2515154137 2515757182 187
71 iso_pu_bacteria 2515154202 2516083152 187
72 iso_pu_bacteria 2515154203 2516092519 187
73 iso_pu_bacteria 2616644814 2616693071 187
74 iso_pu_bacteria 2738543034 2739364594 187
75 iso_pu_bacteria 2862281513 2862290015 187
76 3300002773 JGI25152J39213_1000271 JGI25152J39213_100027118 188
77 3300003203 JGI25406J46586_10040802 JGI25406J46586_100408023 188
78 3300005434 Ga0070709_10091119 Ga0070709_100911192 188
79 3300005437 Ga0070710_10116606 Ga0070710_101166062 188
80 3300005468 Ga0070707_100118634 Ga0070707_1001186343 188
81 3300005471 Ga0070698_100044102 Ga0070698_1000441022 188
82 3300005719 Ga0068861_100510863 Ga0068861_1005108632 188
83 3300005985 Ga0081539_10000212 Ga0081539_10000212125 188
84 3300006173 Ga0070716_100129153 Ga0070716_1001291532 188
85 3300006175 Ga0070712_100175604 Ga0070712_1001756042 188
86 3300006178 Ga0075367_10002565 Ga0075367_100025657 188
87 3300006178 Ga0075367_10389431 Ga0075367_103894312 188
88 3300009036 Ga0105244_10035075 Ga0105244_100350753 188
89 3300009148 Ga0105243_10003349 Ga0105243_100033496 188
90 3300014497 Ga0182008_10000354 Ga0182008_1000035428 188
91 3300015261 Ga0182006_1040753 Ga0182006_10407533 188
92 3300015262 Ga0182007_10001371 Ga0182007_100013712 188
93 3300020082 Ga0206353_11032136 Ga0206353_110321362 188
94 3300025245 Ga0207425_1007684 Ga0207425_10076844 188
95 3300025258 Ga0209129_1000052 Ga0209129_1000052222 188
96 3300025294 Ga0209025_1000570 Ga0209025_100057047 188
97 3300025297 Ga0209758_1005912 Ga0209758_10059127 188
98 3300025302 Ga0207426_1010599 Ga0207426_10105992 188
99 3300025303 Ga0209051_1026859 Ga0209051_10268592 188
100 3300025898 Ga0207692_10211879 Ga0207692_102118792 188
101 3300025910 Ga0207684_10080363 Ga0207684_100803633 188
102 3300025915 Ga0207693_10088277 Ga0207693_100882772 188
103 3300025916 Ga0207663_10358876 Ga0207663_103588762 188
104 3300025922 Ga0207646_10221802 Ga0207646_102218022 188
105 3300025935 Ga0207709_10010311 Ga0207709_100103112 188
106 3300025939 Ga0207665_10196322 Ga0207665_101963222 188
107 3300027866 Ga0209813_10071906 Ga0209813_100719062 188
108 3300028786 Ga0307517_10015621 Ga0307517_100156215 188
109 3300031616 Ga0307508_10029268 Ga0307508_100292685 188
110 3300031616 Ga0307508_10064577 Ga0307508_100645772 188
111 3300031730 Ga0307516_10324214 Ga0307516_103242142 188
112 3300031838 Ga0307518_10153450 Ga0307518_101534502 188
113 3300033179 Ga0307507_10006886 Ga0307507_100068865 188
114 3300037418 Ga0395900_0035175 Ga0395900_0035175_2868_3440 188
115 3300037418 Ga0395900_0400091 Ga0395900_0400091_254_826 188
116 3300037466 Ga0395898_0009484 Ga0395898_0009484_3565_4137 188
117 3300041404 Ga0439436_0007816 Ga0439436_0007816_1078_1650 188
118 3300041512 Ga0451853_0783321 Ga0451853_0783321_115_687 188
119 3300041999 Ga0439433_0004795 Ga0439433_0004795_647_1219 188
120 3300042002 Ga0439442_062497 Ga0439442_062497_116_688 188
121 3300042014 Ga0439457_001901 Ga0439457_001901_1450_2022 188
122 3300042157 Ga0439458_0012694 Ga0439458_0012694_900_1472 188
123 3300042157 Ga0439458_0024224 Ga0439458_0024224_490_1062 188
124 3300044658 Ga0466972_0003080 Ga0466972_0003080_4510_5094 188
125 3300044658 Ga0466972_0007660 Ga0466972_0007660_2765_3337 188
126 3300044658 Ga0466972_0052028 Ga0466972_0052028_198_770 188
127 3300044683 Ga0466965_0057665 Ga0466965_0057665_1104_1676 188
128 3300044683 Ga0466965_0177894 Ga0466965_0177894_171_755 188
129 3300044684 Ga0466966_0000910 Ga0466966_0000910_2652_3236 188
130 3300044684 Ga0466966_0003789 Ga0466966_0003789_4760_5380 188
131 3300044693 Ga0466961_0002170 Ga0466961_0002170_8632_9216 188
132 3300044693 Ga0466961_0005393 Ga0466961_0005393_235_855 188
133 3300044693 Ga0466961_0167502 Ga0466961_0167502_531_1103 188
134 3300044694 Ga0466963_0005694 Ga0466963_0005694_2864_3448 188
135 3300044706 Ga0466964_0034993 Ga0466964_0034993_329_913 188
136 3300044719 Ga0466971_0000214 Ga0466971_0000214_18224_18808 188
137 3300044719 Ga0466971_0020525 Ga0466971_0020525_1622_2242 188
138 3300044719 Ga0466971_0084188 Ga0466971_0084188_500_1075 188
139 3300044735 Ga0466968_0066163 Ga0466968_0066163_564_1184 188
140 3300044765 Ga0466970_0001091 Ga0466970_0001091_3380_3964 188
141 3300044842 Ga0466957_0000451 Ga0466957_0000451_2737_3321 188
142 3300044901 Ga0466960_0127028 Ga0466960_0127028_24_596 188
143 3300045049 Ga0466959_0069373 Ga0466959_0069373_987_1607 188
144 3300045836 Ga0466958_0001739 Ga0466958_0001739_7081_7665 188
145 3300045836 Ga0466958_0118383 Ga0466958_0118383_341_913 188
146 3300045976 Ga0466967_0125657 Ga0466967_0125657_600_1172 188
147 3300045976 Ga0466967_0286955 Ga0466967_0286955_294_881 188
148 3300046674 Ga0495588_0343186 Ga0495588_0343186_116_712 188
149 3300046694 Ga0495649_0125416 Ga0495649_0125416_265_840 188
150 3300047443 Ga0495687_078599 Ga0495687_078599_378_953 188
151 3300048913 Ga0496110_0795770 Ga0496110_0795770_112_714 188
152 3300048918 Ga0496115_0852220 Ga0496115_0852220_35_649 188
153 3300049568 Ga0501031_0391480 Ga0501031_0391480_25_609 188
154 3300049570 Ga0501033_0007029 Ga0501033_0007029_415_999 188
155 3300049572 Ga0501036_0004943 Ga0501036_0004943_3658_4242 188
156 3300049580 Ga0501046_0248236 Ga0501046_0248236_59_643 188
157 3300049581 Ga0501047_0877419 Ga0501047_0877419_31_612 188
158 3300049822 Ga0501035_0095057 Ga0501035_0095057_584_1156 188
159 3300049822 Ga0501035_0448067 Ga0501035_0448067_411_995 188
160 3300049822 Ga0501035_0976702 Ga0501035_0976702_46_621 188
161 3300049823 Ga0501044_0000552 Ga0501044_0000552_12515_13099 188
162 3300049823 Ga0501044_0006366 Ga0501044_0006366_4928_5500 188
163 3300050490 nmdc:mga03n38_471_c1 nmdc:mga03n38_471_c1_527_1120 188
164 3300050494 nmdc:mga06z11_1652_c1 nmdc:mga06z11_1652_c1_5432_6004 188
165 3300050495 nmdc:mga04h51_7476_c1 nmdc:mga04h51_7476_c1_1812_2384 188
166 3300053087 Ga0500643_000209 Ga0500643_000209_35376_35960 188
167 3300053149 Ga0500600_0146764 Ga0500600_0146764_154_726 188
168 3300061719 Ga0466962_0000432 Ga0466962_0000432_605_1189 188
169 3300061719 Ga0466962_0047517 Ga0466962_0047517_466_1050 188
170 iso_pu_bacteria 2582581314 2585315870 188
171 iso_pu_bacteria 2643221587 2643943110 188
172 iso_pu_bacteria 2643221657 2644318809 188
173 iso_pu_bacteria 2643221677 2644430570 188
174 iso_pu_bacteria 2818991472 2819747767 188
175 iso_pu_bacteria 2844849076 2844850989 188
176 iso_pu_bacteria 2919395869 2919397906 188
177 iso_pu_bacteria 8048406513 8048411588 188
178 3300049569 Ga0501032_0059291 Ga0501032_0059291_1963_2556 189
179 3300049580 Ga0501046_0310571 Ga0501046_0310571_460_1053 189
180 3300049582 Ga0501048_0079831 Ga0501048_0079831_609_1295 189
181 3300046457 Ga0495590_0195910 Ga0495590_0195910_94_705 190
182 3300046794 Ga0495589_0061349 Ga0495589_0061349_967_1578 190
183 3300047318 Ga0495636_0007696 Ga0495636_0007696_2825_3436 190
184 iso_pu_bacteria 2954002825 2954008708 190
185 iso_pu_bacteria 3006393351 3006399367 190
186 3300005327 Ga0070658_10000065 Ga0070658_1000006546 191
187 3300005455 Ga0070663_100036018 Ga0070663_1000360182 191
188 3300005563 Ga0068855_100193662 Ga0068855_1001936623 191
189 3300013102 Ga0157371_10141177 Ga0157371_101411771 191
190 3300013104 Ga0157370_10172964 Ga0157370_101729643 191
191 3300014497 Ga0182008_10221202 Ga0182008_102212021 191
192 3300025909 Ga0207705_10000001 Ga0207705_100000011041 191
193 3300025919 Ga0207657_10215701 Ga0207657_102157013 191
194 3300025942 Ga0207689_10154012 Ga0207689_101540121 191
195 3300026067 Ga0207678_10012731 Ga0207678_100127318 191
196 3300041498 Ga0451841_0218227 Ga0451841_0218227_393_998 191
197 3300041512 Ga0451853_2765009 Ga0451853_2765009_40_645 191
198 3300044694 Ga0466963_0062791 Ga0466963_0062791_1033_1623 191
199 3300045976 Ga0466967_0236939 Ga0466967_0236939_456_1046 191
200 3300046689 Ga0495613_0398079 Ga0495613_0398079_128_727 191
201 iso_pu_bacteria 2808606375 2808918073 191
202 iso_pu_bacteria 2862382967 2862385142 191
203 iso_pu_bacteria 2863404153 2863407323 191
204 iso_pu_bacteria 8008558824 8008560939 191
205 3300001989 JGI24739J22299_10013443 JGI24739J22299_100134432 192
206 3300002075 JGI24738J21930_10022864 JGI24738J21930_100228642 192
207 3300005455 Ga0070663_100170756 Ga0070663_1001707561 192
208 3300005614 Ga0068856_100851439 Ga0068856_1008514391 192
209 3300009092 Ga0105250_10220595 Ga0105250_102205951 192
210 3300013307 Ga0157372_10251289 Ga0157372_102512891 192
211 3300021388 Ga0213875_10015490 Ga0213875_100154902 192
212 3300025904 Ga0207647_10030079 Ga0207647_100300792 192
213 3300026041 Ga0207639_10239464 Ga0207639_102394641 192
214 3300028794 Ga0307515_10089689 Ga0307515_100896892 192
215 3300030521 Ga0307511_10036592 Ga0307511_100365924 192
216 3300030522 Ga0307512_10006485 Ga0307512_100064857 192
217 3300031456 Ga0307513_10060728 Ga0307513_100607282 192
218 3300031456 Ga0307513_10070911 Ga0307513_100709112 192
219 3300031616 Ga0307508_10036928 Ga0307508_100369283 192
220 3300031649 Ga0307514_10148246 Ga0307514_101482462 192
221 3300033180 Ga0307510_10000606 Ga0307510_1000060630 192
222 3300035171 Ga0373946_0329755 Ga0373946_0329755_13_621 192
223 3300037466 Ga0395898_0002245 Ga0395898_0002245_752_1333 192
224 3300037853 Ga0436364_0952118 Ga0436364_0952118_2589_3239 192
225 3300042002 Ga0439442_057015 Ga0439442_057015_111_689 192
226 3300042007 Ga0439449_0013474 Ga0439449_0013474_299_910 192
227 3300042007 Ga0439449_0072362 Ga0439449_0072362_362_940 192
228 3300042131 Ga0450894_000359 Ga0450894_000359_3101_3697 192
229 3300042133 Ga0450896_001488 Ga0450896_001488_1641_2237 192
230 3300042134 Ga0450898_000065 Ga0450898_000065_698_1294 192
231 3300042135 Ga0450899_000112 Ga0450899_000112_5024_5620 192
232 3300042145 Ga0450906_000110 Ga0450906_000110_8506_9102 192
233 3300044694 Ga0466963_0005901 Ga0466963_0005901_6374_7000 192
234 3300046452 Ga0495617_011946 Ga0495617_011946_625_1227 192
235 3300046453 Ga0495627_014237 Ga0495627_014237_96_692 192
236 3300046455 Ga0495603_0011134 Ga0495603_0011134_2108_2710 192
237 3300046455 Ga0495603_0015780 Ga0495603_0015780_1780_2424 192
238 3300046455 Ga0495603_0024036 Ga0495603_0024036_742_1386 192
239 3300046459 Ga0495629_0007664 Ga0495629_0007664_2284_2865 192
240 3300046459 Ga0495629_0009828 Ga0495629_0009828_861_1505 192
241 3300046459 Ga0495629_0093887 Ga0495629_0093887_540_1142 192
242 3300046459 Ga0495629_0213356 Ga0495629_0213356_336_980 192
243 3300046459 Ga0495629_0287570 Ga0495629_0287570_360_962 192
244 3300046460 Ga0495638_0124478 Ga0495638_0124478_904_1506 192
245 3300046462 Ga0495651_0016024 Ga0495651_0016024_4960_5556 192
246 3300046474 Ga0495605_0006404 Ga0495605_0006404_2455_3057 192
247 3300046475 Ga0495639_0187370 Ga0495639_0187370_32_676 192
248 3300046475 Ga0495639_0203287 Ga0495639_0203287_329_949 192
249 3300046476 Ga0495662_0013428 Ga0495662_0013428_751_1404 192
250 3300046476 Ga0495662_0047765 Ga0495662_0047765_1166_1822 192
251 3300046476 Ga0495662_0094878 Ga0495662_0094878_202_846 192
252 3300046492 Ga0495585_0021677 Ga0495585_0021677_112_714 192
253 3300046499 Ga0495594_0018906 Ga0495594_0018906_1864_2466 192
254 3300046499 Ga0495594_0020588 Ga0495594_0020588_1267_1848 192
255 3300046499 Ga0495594_0022580 Ga0495594_0022580_2350_2994 192
256 3300046500 Ga0495596_0156458 Ga0495596_0156458_251_853 192
257 3300046501 Ga0495607_0073305 Ga0495607_0073305_111_713 192
258 3300046506 Ga0495583_0030398 Ga0495583_0030398_1647_2249 192
259 3300046506 Ga0495583_0061202 Ga0495583_0061202_1038_1640 192
260 3300046507 Ga0495606_0004135 Ga0495606_0004135_4273_4875 192
261 3300046511 Ga0495608_0057453 Ga0495608_0057453_846_1442 192
262 3300046512 Ga0495610_0050949 Ga0495610_0050949_699_1301 192
263 3300046513 Ga0495616_0141774 Ga0495616_0141774_111_713 192
264 3300046514 Ga0495618_0075874 Ga0495618_0075874_1220_1816 192
265 3300046514 Ga0495618_0376542 Ga0495618_0376542_16_618 192
266 3300046515 Ga0495620_0001985 Ga0495620_0001985_2309_2911 192
267 3300046515 Ga0495620_0003171 Ga0495620_0003171_1755_2357 192
268 3300046516 Ga0495628_0145148 Ga0495628_0145148_39_635 192
269 3300046516 Ga0495628_0275950 Ga0495628_0275950_143_745 192
270 3300046518 Ga0495631_0068872 Ga0495631_0068872_479_1081 192
271 3300046519 Ga0495632_0033081 Ga0495632_0033081_1690_2292 192
272 3300046520 Ga0495637_0162411 Ga0495637_0162411_122_724 192
273 3300046522 Ga0495643_0008966 Ga0495643_0008966_509_1111 192
274 3300046526 Ga0495666_0044265 Ga0495666_0044265_366_962 192
275 3300046529 Ga0495652_0074795 Ga0495652_0074795_507_1103 192
276 3300046533 Ga0495640_0021760 Ga0495640_0021760_1813_2415 192
277 3300046538 Ga0495609_0008520 Ga0495609_0008520_3261_3863 192
278 3300046542 Ga0495597_0184200 Ga0495597_0184200_130_732 192
279 3300046558 Ga0495633_0012489 Ga0495633_0012489_3499_4101 192
280 3300046616 Ga0495668_0082580 Ga0495668_0082580_1108_1710 192
281 3300046648 Ga0495611_0217422 Ga0495611_0217422_64_666 192
282 3300046660 Ga0495625_0004570 Ga0495625_0004570_8757_9338 192
283 3300046660 Ga0495625_0097252 Ga0495625_0097252_30_632 192
284 3300046674 Ga0495588_0172691 Ga0495588_0172691_11_613 192
285 3300046674 Ga0495588_0184131 Ga0495588_0184131_213_794 192
286 3300046675 Ga0495657_0004263 Ga0495657_0004263_4802_5455 192
287 3300046675 Ga0495657_0047474 Ga0495657_0047474_493_1095 192
288 3300046675 Ga0495657_0330536 Ga0495657_0330536_138_734 192
289 3300046679 Ga0495623_0125569 Ga0495623_0125569_430_1026 192
290 3300046689 Ga0495613_0015943 Ga0495613_0015943_4720_5376 192
291 3300046689 Ga0495613_0017042 Ga0495613_0017042_1226_1828 192
292 3300046689 Ga0495613_0050279 Ga0495613_0050279_1602_2255 192
293 3300046691 Ga0495670_0182358 Ga0495670_0182358_87_731 192
294 3300046692 Ga0495671_0005690 Ga0495671_0005690_6639_7220 192
295 3300046692 Ga0495671_0040924 Ga0495671_0040924_1000_1602 192
296 3300046694 Ga0495649_0049066 Ga0495649_0049066_1039_1641 192
297 3300046794 Ga0495589_0014912 Ga0495589_0014912_1754_2356 192
298 3300046794 Ga0495589_0019666 Ga0495589_0019666_224_826 192
299 3300046809 Ga0495600_0449669 Ga0495600_0449669_53_673 192
300 3300047315 Ga0495581_0110257 Ga0495581_0110257_961_1557 192
301 3300047317 Ga0495604_0254625 Ga0495604_0254625_543_1145 192
302 3300047318 Ga0495636_0001198 Ga0495636_0001198_2243_2887 192
303 3300047318 Ga0495636_0021216 Ga0495636_0021216_448_1047 192
304 3300047318 Ga0495636_0026397 Ga0495636_0026397_1442_2044 192
305 3300047319 Ga0495674_0207192 Ga0495674_0207192_501_1103 192
306 3300047321 Ga0495676_0052209 Ga0495676_0052209_1551_2153 192
307 3300047322 Ga0495680_0031979 Ga0495680_0031979_3437_4033 192
308 3300047443 Ga0495687_031104 Ga0495687_031104_469_1071 192
309 3300047443 Ga0495687_048495 Ga0495687_048495_906_1508 192
310 3300047443 Ga0495687_139670 Ga0495687_139670_112_714 192
311 3300047444 Ga0495675_0011018 Ga0495675_0011018_513_1133 192
312 3300047444 Ga0495675_0033930 Ga0495675_0033930_2631_3227 192
313 3300047445 Ga0495677_0030326 Ga0495677_0030326_899_1501 192
314 3300047447 Ga0495685_003372 Ga0495685_003372_4431_5027 192
315 3300047447 Ga0495685_009584 Ga0495685_009584_2280_2879 192
316 3300047447 Ga0495685_019861 Ga0495685_019861_573_1157 192
317 3300047469 Ga0495673_0150082 Ga0495673_0150082_141_743 192
318 3300047471 Ga0495684_0241921 Ga0495684_0241921_349_1080 192
319 3300047472 Ga0495686_0074554 Ga0495686_0074554_772_1374 192
320 3300047673 Ga0495593_0037432 Ga0495593_0037432_1526_2122 192
321 3300047673 Ga0495593_0045198 Ga0495593_0045198_926_1528 192
322 3300048088 Ga0495602_0197814 Ga0495602_0197814_505_1101 192
323 3300048089 Ga0495614_0061124 Ga0495614_0061124_883_1479 192
324 3300048089 Ga0495614_0150619 Ga0495614_0150619_396_998 192
325 3300048091 Ga0495626_0055189 Ga0495626_0055189_863_1465 192
326 3300048905 Ga0496102_0003399 Ga0496102_0003399_10992_11636 192
327 3300048912 Ga0496109_0044434 Ga0496109_0044434_3343_3984 192
328 3300049460 Ga0495682_0030640 Ga0495682_0030640_361_963 192
329 3300049568 Ga0501031_0061144 Ga0501031_0061144_463_1164 192
330 3300049570 Ga0501033_0011690 Ga0501033_0011690_4881_5582 192
331 3300049571 Ga0501034_0019487 Ga0501034_0019487_2293_2994 192
332 3300049571 Ga0501034_0115306 Ga0501034_0115306_115_801 192
333 3300049571 Ga0501034_0563669 Ga0501034_0563669_153_755 192
334 3300049572 Ga0501036_0012715 Ga0501036_0012715_1970_2671 192
335 3300049573 Ga0501037_0019319 Ga0501037_0019319_2172_2873 192
336 3300049573 Ga0501037_0115041 Ga0501037_0115041_1013_1699 192
337 3300049573 Ga0501037_0124928 Ga0501037_0124928_930_1532 192
338 3300049574 Ga0501038_0004272 Ga0501038_0004272_12204_12806 192
339 3300049574 Ga0501038_0009874 Ga0501038_0009874_4858_5559 192
340 3300049575 Ga0501039_0048359 Ga0501039_0048359_40_663 192
341 3300049575 Ga0501039_0166650 Ga0501039_0166650_1095_1697 192
342 3300049578 Ga0501042_0046121 Ga0501042_0046121_485_1186 192
343 3300049579 Ga0501043_0024473 Ga0501043_0024473_3944_4645 192
344 3300049581 Ga0501047_0024702 Ga0501047_0024702_4880_5566 192
345 3300049581 Ga0501047_0077957 Ga0501047_0077957_2292_2993 192
346 3300049581 Ga0501047_0077972 Ga0501047_0077972_762_1364 192
347 3300049582 Ga0501048_0489935 Ga0501048_0489935_92_778 192
348 3300049586 Ga0501070_0394625 Ga0501070_0394625_110_820 192
349 3300049742 Ga0501080_0143758 Ga0501080_0143758_657_1259 192
350 3300049822 Ga0501035_0021542 Ga0501035_0021542_2262_2963 192
351 3300049822 Ga0501035_0072473 Ga0501035_0072473_1925_2527 192
352 3300049823 Ga0501044_0187303 Ga0501044_0187303_805_1506 192
353 3300053098 Ga0500650_0080666 Ga0500650_0080666_272_853 192
354 3300053107 Ga0500560_036731 Ga0500560_036731_584_1165 192
355 3300053140 Ga0500573_0067245 Ga0500573_0067245_1304_1933 192
356 3300053149 Ga0500600_0044235 Ga0500600_0044235_1053_1643 192

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01381

HTH_3

Helix-turn-helix

21

75

0.98

PF13443

HTH_26

Cro/C1-type HTH DNA-binding domain

20

80

0.96

PF13560

HTH_31

Helix-turn-helix domain

17

76

0.96

PF07883

Cupin_2

Cupin domain

111

182

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1y7y-assembly1.cif.gz_B high-resolution crystal structure of the restriction-modification controller protein c.ahdi from aeromonas hydrophila 0.9461 9 70
3zkc-assembly1.cif.gz_B crystal structure of the master regulator for biofilm formation sinr in complex with dna. 0.9376 12 71
6rnz-assembly2.cif.gz_B crystal structure of the n-terminal hth dna-binding domain of the essential repressor ddro from radiation-resistant deinococcus bacteria (deinococcus deserti) 0.9353 12 73
2xj3-assembly1.cif.gz_B high resolution structure of the t55c mutant of cylr2. 0.9338 15 69
2xj3-assembly1.cif.gz_A high resolution structure of the t55c mutant of cylr2. 0.9335 16 69
ID Description Score Start End Superfamily
1y7yB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9461 9 70 1.10.260.40
3qq6B00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9431 8 72 1.10.260.40
3zkcB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9376 12 71 1.10.260.40
3f51C00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9365 10 71 1.10.260.40
2gzuB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9326 15 69 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A7G6WYS9-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9654 9 72 GO:0003677
GO:0003700
GO:0005829
AF-A0A358PWS9-F1-model_v4 deleted 0.9263 10 76
AF-A0A537AAX3-F1-model_v4 Cupin domain-containing protein 0.9167 91 177
AF-A0A2S7SRQ5-F1-model_v4 XRE family transcriptional regulator 0.913 6 72 GO:0003677
AF-A0A1H4SH75-F1-model_v4 Helix-turn-helix domain-containing protein 0.911 8 73 GO:0003677
GO:0003700
GO:0005829

Feature Viewer

pLDDT pTM Quality
86.63 0.55 Medium
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Predicted Structure (AlphaFold2)

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