F418807

General Info

Members Datasets Scaffolds Average Seq Length
351 198 702 262

Family's Representative Sequence

Representative Sequence 3300049584|Ga0501068_0131094|Ga0501068_0131094_436_1305
Length 289
Sequence MIDFVGDYPGGRGLSAARTTLVGMVGRIRIGAHVEQEDPLAEARARDTDLVQFFLGNPQGYKGPEVRYAGGLEGLRDDAAAAGVELYVHAPYLVNVATTNNRIRIPSRKLLQQHVDAAAALGAKGLIVHGGHVDKADDVDTGIDNWRKAVEATDIKLPLLIENTAGGDNAMTRYLERIDRVFDAISAAEGSDMVGFCLDTCHAHAGGNALETVVEDVLKVTGRIDLVHANDSRDEFDSGADRHTNFGAGRIDPDLLAAVVRDAGVPVICETPGGAAEHRADFAFLRERV

Samples

Sample ID Description Type Environment
1 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
97 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
98 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
99 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
100 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
107 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
108 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
109 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
110 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
111 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
115 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
116 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
148 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
162 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
163 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
166 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
167 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
168 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
169 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
170 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
171 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
172 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
173 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
178 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
179 2643221576 Nocardioides sp. Root614 Isolate Unclassified
180 2643221590 Nocardioides sp. Root682 Isolate Unclassified
181 2643221604 Nocardioides sp. Root190 Isolate Unclassified
182 2643221615 Nocardioides sp. Root224 Isolate Unclassified
183 2643221617 Nocardioides sp. Root79 Isolate Unclassified
184 2643221620 Nocardioides sp. Root240 Isolate Unclassified
185 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
186 2643221641 Nocardioides sp. Root122 Isolate Unclassified
187 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
188 2738541305 Nocardioides sp. CF167 Isolate Unclassified
189 2739367898 Nocardioides sp. CF479 Isolate Unclassified
190 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
191 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
192 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
193 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
194 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
195 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
196 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
197 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
198 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 93.16
Metatranscriptomes 0.85
Isolates 5.98

Biome Distribution

Category Percentage (%)
Aerial Root 0.28
Bulb 0
Endosphere 11.97
Nodule 0
Rhizoplane 15.38
Rhizosphere 65.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501068_0131094 3300049584 Bacteria 1567
2 JGI24744J21845_10002279 3300002077 Bacteria 3909
3 Ga0006562J51391_1093674 3300003578 Bacteria 1380
4 Ga0070683_100076907 3300005329 Bacteria 3121
5 Ga0070680_100114702 3300005336 Bacteria 2245
6 Ga0070660_100003746 3300005339 Bacteria 10507
7 Ga0070660_100176143 3300005339 Bacteria 1730
8 Ga0070692_10003626 3300005345 Bacteria 6304
9 Ga0070675_100210037 3300005354 Bacteria 1692
10 Ga0070673_100231253 3300005364 Bacteria 1604
11 Ga0070673_100612836 3300005364 Bacteria 994
12 Ga0070688_100201644 3300005365 Bacteria 1392
13 Ga0070659_100155240 3300005366 Bacteria 1869
14 Ga0070659_100231661 3300005366 Bacteria 1526
15 Ga0070700_100192233 3300005441 Bacteria 1428
16 Ga0070678_100156990 3300005456 Bacteria 1839
17 Ga0070662_100349161 3300005457 Bacteria 1212
18 Ga0068867_100118250 3300005459 Bacteria 2044
19 Ga0070685_10411530 3300005466 Bacteria 939
20 Ga0070679_100014011 3300005530 Bacteria 7686
21 Ga0070684_100006824 3300005535 Bacteria 8856
22 Ga0070672_100103746 3300005543 Bacteria 2310
23 Ga0070693_100081325 3300005547 Bacteria 1932
24 Ga0070665_100000739 3300005548 Bacteria 43504
25 Ga0068855_100054138 3300005563 Bacteria 4717
26 Ga0068857_100024276 3300005577 Bacteria 5336
27 Ga0070702_100139267 3300005615 Bacteria 1543
28 Ga0068852_100331489 3300005616 Bacteria 1481
29 Ga0068864_100023119 3300005618 Bacteria 5220
30 Ga0068866_10024242 3300005718 Bacteria 2833
31 Ga0068866_10027873 3300005718 Bacteria 2686
32 Ga0081539_10102870 3300005985 Bacteria 1453
33 Ga0075365_10002664 3300006038 Bacteria 8868
34 Ga0075365_10047923 3300006038 Bacteria 2810
35 Ga0075365_10076901 3300006038 Bacteria 2254
36 Ga0075365_10148107 3300006038 Bacteria 1632
37 Ga0075365_10203117 3300006038 Bacteria 1388
38 Ga0075365_10226386 3300006038 Bacteria 1312
39 Ga0075365_10300051 3300006038 Bacteria 1130
40 Ga0075365_10314605 3300006038 Bacteria 1102
41 Ga0075365_10350034 3300006038 Bacteria 1041
42 Ga0075368_10003661 3300006042 Bacteria 5153
43 Ga0075368_10021323 3300006042 Bacteria 2460
44 Ga0075363_100004958 3300006048 Bacteria 5888
45 Ga0075363_100042571 3300006048 Bacteria 2400
46 Ga0075363_100150718 3300006048 Bacteria 1312
47 Ga0075363_100177352 3300006048 Bacteria 1211
48 Ga0075364_10034433 3300006051 Bacteria 3267
49 Ga0075364_10269725 3300006051 Bacteria 1157
50 Ga0075367_10024429 3300006178 Bacteria 3408
51 Ga0075367_10175212 3300006178 Bacteria 1336
52 Ga0075370_10021724 3300006353 Bacteria 3516
53 Ga0068865_100118299 3300006881 Bacteria 1966
54 Ga0111539_10597852 3300009094 Bacteria 1285
55 Ga0105245_10014237 3300009098 Bacteria 6930
56 Ga0105245_10305121 3300009098 Bacteria 1563
57 Ga0105245_10921859 3300009098 Bacteria 916
58 Ga0105247_10284873 3300009101 Bacteria 1141
59 Ga0105243_10002070 3300009148 Bacteria 17014
60 Ga0105248_10026081 3300009177 Bacteria 6502
61 Ga0105249_10031015 3300009553 Bacteria 4833
62 Ga0105249_10127144 3300009553 Bacteria 2428
63 Ga0105239_10088633 3300010375 Bacteria 3411
64 Ga0105239_10413804 3300010375 Bacteria 1527
65 Ga0105246_10153299 3300011119 Bacteria 1747
66 Ga0157369_10036080 3300013105 Bacteria 5419
67 Ga0157369_10651400 3300013105 Bacteria 1086
68 Ga0163162_10096607 3300013306 Bacteria 3043
69 Ga0157372_10003814 3300013307 Bacteria 16192
70 Ga0157372_10164907 3300013307 Bacteria 2562
71 Ga0157375_10396753 3300013308 Bacteria 1546
72 Ga0157380_10073459 3300014326 Bacteria 2773
73 Ga0182008_10010983 3300014497 Bacteria 4829
74 Ga0157377_10017499 3300014745 Bacteria 3707
75 Ga0157377_10240412 3300014745 Bacteria 1168
76 Ga0157377_10402601 3300014745 Bacteria 932
77 Ga0157379_10025435 3300014968 Bacteria 5259
78 Ga0206353_10419385 3300020082 Bacteria 2232
79 Ga0206353_10590081 3300020082 Bacteria 8878
80 Ga0213876_10104574 3300021384 Bacteria 1502
81 Ga0207688_10003589 3300025901 Bacteria 8471
82 Ga0207688_10038193 3300025901 Bacteria 2664
83 Ga0207647_10008514 3300025904 Bacteria 7347
84 Ga0207647_10021710 3300025904 Bacteria 4280
85 Ga0207647_10181401 3300025904 Bacteria 1222
86 Ga0207643_10005026 3300025908 Bacteria 7085
87 Ga0207643_10231244 3300025908 Bacteria 1134
88 Ga0207705_10039898 3300025909 Bacteria 3365
89 Ga0207660_10012964 3300025917 Bacteria 5461
90 Ga0207657_10009058 3300025919 Bacteria 10051
91 Ga0207657_10101491 3300025919 Bacteria 2388
92 Ga0207657_10177230 3300025919 Bacteria 1725
93 Ga0207657_10477135 3300025919 Bacteria 978
94 Ga0207652_10006742 3300025921 Bacteria 9256
95 Ga0207650_10139918 3300025925 Bacteria 1902
96 Ga0207687_10042525 3300025927 Bacteria 3127
97 Ga0207687_10258662 3300025927 Bacteria 1387
98 Ga0207690_10086471 3300025932 Bacteria 2203
99 Ga0207690_10315439 3300025932 Bacteria 1227
100 Ga0207706_10382882 3300025933 Bacteria 1220
101 Ga0207709_10086024 3300025935 Bacteria 2040
102 Ga0207709_10177579 3300025935 Bacteria 1500
103 Ga0207704_10033112 3300025938 Bacteria 2935
104 Ga0207691_10053573 3300025940 Bacteria 3683
105 Ga0207711_10027883 3300025941 Bacteria 4747
106 Ga0207661_10063283 3300025944 Bacteria 2996
107 Ga0207661_10238338 3300025944 Bacteria 1613
108 Ga0207667_10318990 3300025949 Bacteria 1587
109 Ga0207651_10198867 3300025960 Bacteria 1605
110 Ga0207712_10015940 3300025961 Bacteria 4857
111 Ga0207712_10253284 3300025961 Bacteria 1424
112 Ga0207678_10158305 3300026067 Bacteria 1934
113 Ga0207678_10437873 3300026067 Bacteria 1135
114 Ga0207708_10049881 3300026075 Bacteria 3187
115 Ga0207708_10194359 3300026075 Bacteria 1617
116 Ga0207648_10000688 3300026089 Bacteria 37846
117 Ga0207676_10013050 3300026095 Bacteria 5965
118 Ga0207674_10065247 3300026116 Bacteria 3670
119 Ga0207675_100071077 3300026118 Bacteria 3253
120 Ga0207675_100074762 3300026118 Bacteria 3171
121 Ga0209813_10002703 3300027866 Bacteria 4083
122 Ga0209813_10096526 3300027866 Bacteria 1000
123 Ga0207428_10114386 3300027907 Bacteria 2074
124 Ga0268266_10001664 3300028379 Bacteria 25647
125 Ga0268264_10000791 3300028381 Bacteria 34364
126 Ga0307405_10175241 3300031731 Bacteria 1534
127 Ga0307410_10178254 3300031852 Bacteria 1607
128 Ga0307410_10269782 3300031852 Bacteria 1331
129 Ga0307406_10124182 3300031901 Bacteria 1800
130 Ga0307407_10017052 3300031903 Bacteria 3633
131 Ga0307407_10120627 3300031903 Bacteria 1662
132 Ga0307407_10332885 3300031903 Bacteria 1069
133 Ga0307409_100002153 3300031995 Bacteria 10151
134 Ga0307409_100006886 3300031995 Bacteria 6736
135 Ga0307409_100024449 3300031995 Bacteria 4213
136 Ga0307409_100095848 3300031995 Bacteria 2446
137 Ga0307409_100343273 3300031995 Bacteria 1406
138 Ga0307409_100398102 3300031995 Bacteria 1314
139 Ga0307409_100661887 3300031995 Bacteria 1039
140 Ga0307416_100037376 3300032002 Bacteria 3735
141 Ga0307416_100184756 3300032002 Bacteria 1958
142 Ga0307411_10051951 3300032005 Bacteria 2677
143 Ga0307411_10140943 3300032005 Bacteria 1778
144 Ga0307415_100001314 3300032126 Bacteria 11760
145 Ga0307415_100028224 3300032126 Bacteria 3567
146 Ga0307415_100183332 3300032126 Bacteria 1645
147 Ga0395900_0465037 3300037418 Bacteria 1219
148 Ga0395898_0013187 3300037466 Bacteria 8514
149 Ga0395898_0272330 3300037466 Bacteria 1615
150 Ga0395898_0644140 3300037466 Bacteria 1002
151 Ga0395905_0064184 3300037471 Bacteria 3436
152 Ga0436364_0241112 3300037853 Bacteria 4391
153 Ga0395901_0014900 3300038443 Bacteria 7899
154 Ga0436365_0031318 3300039437 Bacteria 2756
155 Ga0451797_0788597 3300041453 Bacteria 1158
156 Ga0451853_1986490 3300041512 Bacteria 1234
157 Ga0439431_0017813 3300041997 Bacteria 1674
158 Ga0439448_0142011 3300042005 Bacteria 831
159 Ga0466972_0024095 3300044658 Bacteria 3021
160 Ga0466972_0071777 3300044658 Bacteria 1651
161 Ga0466965_0112080 3300044683 Bacteria 1402
162 Ga0466966_0147650 3300044684 Bacteria 1435
163 Ga0466961_0008483 3300044693 Bacteria 6546
164 Ga0466961_0057572 3300044693 Bacteria 2474
165 Ga0466963_0023550 3300044694 Bacteria 3912
166 Ga0466963_0283400 3300044694 Bacteria 1165
167 Ga0466964_0009611 3300044706 Bacteria 3643
168 Ga0466964_0061686 3300044706 Bacteria 1562
169 Ga0466968_0014527 3300044735 Bacteria 3112
170 Ga0466968_0128451 3300044735 Bacteria 1152
171 Ga0466970_0001442 3300044765 Bacteria 11509
172 Ga0466970_0025071 3300044765 Bacteria 3121
173 Ga0466970_0070698 3300044765 Bacteria 1876
174 Ga0466960_0015091 3300044901 Bacteria 3325
175 Ga0466960_0075428 3300044901 Bacteria 1687
176 Ga0466960_0077333 3300044901 Bacteria 1668
177 Ga0466960_0187834 3300044901 Bacteria 1123
178 Ga0466960_0205266 3300044901 Bacteria 1078
179 Ga0451576_0244247 3300045051 Bacteria 1876
180 Ga0466958_0147996 3300045836 Bacteria 1481
181 Ga0466967_0002113 3300045976 Bacteria 12194
182 Ga0466967_0014307 3300045976 Bacteria 6174
183 Ga0466967_0042860 3300045976 Bacteria 3914
184 Ga0466967_0069503 3300045976 Bacteria 3148
185 Ga0466967_0080599 3300045976 Bacteria 2938
186 Ga0466967_0313940 3300045976 Bacteria 1510
187 Ga0466967_1048783 3300045976 Bacteria 812
188 Ga0495603_0070098 3300046455 Bacteria 2061
189 Ga0495641_0100876 3300046461 Bacteria 1288
190 Ga0495608_0277599 3300046511 Bacteria 1041
191 Ga0495658_0079079 3300046683 Bacteria 1926
192 Ga0495658_0095304 3300046683 Bacteria 1769
193 Ga0496100_0096460 3300048903 Bacteria 2029
194 Ga0496101_0034871 3300048904 Bacteria 3556
195 Ga0496101_0056128 3300048904 Bacteria 2847
196 Ga0496101_0258496 3300048904 Bacteria 1358
197 Ga0496101_0426539 3300048904 Bacteria 1045
198 Ga0496101_0529553 3300048904 Bacteria 931
199 Ga0496102_0010935 3300048905 Bacteria 7817
200 Ga0496102_0015423 3300048905 Bacteria 6656
201 Ga0496102_0023672 3300048905 Bacteria 5457
202 Ga0496102_0059275 3300048905 Bacteria 3500
203 Ga0496102_0345352 3300048905 Bacteria 1401
204 Ga0496102_0510828 3300048905 Bacteria 1124
205 Ga0496103_0110926 3300048906 Bacteria 1743
206 Ga0496103_0143410 3300048906 Bacteria 1528
207 Ga0496104_0004155 3300048907 Bacteria 12566
208 Ga0496104_0421883 3300048907 Bacteria 1246
209 Ga0496105_0276111 3300048908 Bacteria 1356
210 Ga0496106_0018528 3300048909 Bacteria 5149
211 Ga0496107_0008649 3300048910 Bacteria 7052
212 Ga0496107_0312288 3300048910 Bacteria 1170
213 Ga0496108_0003504 3300048911 Bacteria 12572
214 Ga0496108_0062105 3300048911 Bacteria 3146
215 Ga0496108_0275295 3300048911 Bacteria 1465
216 Ga0496108_0319157 3300048911 Bacteria 1354
217 Ga0496109_0070405 3300048912 Bacteria 3210
218 Ga0496109_0093484 3300048912 Bacteria 2783
219 Ga0496109_0130166 3300048912 Bacteria 2348
220 Ga0496109_0158920 3300048912 Bacteria 2117
221 Ga0496109_0326068 3300048912 Bacteria 1449
222 Ga0496109_0356450 3300048912 Bacteria 1382
223 Ga0496109_0365046 3300048912 Bacteria 1364
224 Ga0496110_0034716 3300048913 Bacteria 4371
225 Ga0496110_0059820 3300048913 Bacteria 3359
226 Ga0496110_0315029 3300048913 Bacteria 1425
227 Ga0496110_0383201 3300048913 Bacteria 1281
228 Ga0496110_0517468 3300048913 Bacteria 1086
229 Ga0496110_0534791 3300048913 Bacteria 1066
230 Ga0496110_0645082 3300048913 Bacteria 958
231 Ga0496111_0167559 3300048914 Bacteria 1632
232 Ga0496111_0290536 3300048914 Bacteria 1212
233 Ga0496113_0342556 3300048916 Bacteria 1199
234 Ga0496113_0354370 3300048916 Bacteria 1177
235 Ga0496114_0013101 3300048917 Bacteria 6643
236 Ga0496114_0021186 3300048917 Bacteria 5286
237 Ga0496114_0047456 3300048917 Bacteria 3572
238 Ga0496114_0051864 3300048917 Bacteria 3416
239 Ga0496114_0069120 3300048917 Bacteria 2966
240 Ga0496114_0087936 3300048917 Bacteria 2635
241 Ga0496114_0271427 3300048917 Bacteria 1494
242 Ga0496114_0391931 3300048917 Bacteria 1230
243 Ga0496114_0479138 3300048917 Bacteria 1101
244 Ga0496115_0014871 3300048918 Bacteria 5901
245 Ga0496115_0543341 3300048918 Bacteria 929
246 Ga0501031_0040178 3300049568 Bacteria 3054
247 Ga0501031_0279769 3300049568 Bacteria 1082
248 Ga0501032_0007036 3300049569 Bacteria 8251
249 Ga0501032_0039168 3300049569 Bacteria 3225
250 Ga0501032_0074449 3300049569 Bacteria 2263
251 Ga0501033_0002822 3300049570 Bacteria 14542
252 Ga0501034_0006103 3300049571 Bacteria 13002
253 Ga0501034_0042466 3300049571 Bacteria 4603
254 Ga0501034_0281974 3300049571 Bacteria 1601
255 Ga0501036_0022751 3300049572 Bacteria 5277
256 Ga0501036_0032944 3300049572 Bacteria 4381
257 Ga0501036_0178744 3300049572 Bacteria 1787
258 Ga0501037_0057358 3300049573 Bacteria 2843
259 Ga0501037_0232041 3300049573 Bacteria 1295
260 Ga0501037_0408364 3300049573 Bacteria 931
261 Ga0501038_0010593 3300049574 Bacteria 8426
262 Ga0501038_0045704 3300049574 Bacteria 3799
263 Ga0501038_0216118 3300049574 Bacteria 1532
264 Ga0501039_0019622 3300049575 Bacteria 5184
265 Ga0501039_0033459 3300049575 Bacteria 3963
266 Ga0501039_0057493 3300049575 Bacteria 3012
267 Ga0501039_0065928 3300049575 Bacteria 2810
268 Ga0501040_0106234 3300049576 Bacteria 1962
269 Ga0501040_0154748 3300049576 Bacteria 1619
270 Ga0501041_0122309 3300049577 Bacteria 1618
271 Ga0501041_0347568 3300049577 Bacteria 937
272 Ga0501042_0003805 3300049578 Bacteria 9542
273 Ga0501042_0147371 3300049578 Bacteria 1697
274 Ga0501042_0231201 3300049578 Bacteria 1334
275 Ga0501042_0269967 3300049578 Bacteria 1228
276 Ga0501043_0017927 3300049579 Bacteria 5551
277 Ga0501046_0000920 3300049580 Bacteria 28874
278 Ga0501046_0005972 3300049580 Bacteria 10838
279 Ga0501046_0033810 3300049580 Bacteria 4129
280 Ga0501047_0044847 3300049581 Bacteria 4273
281 Ga0501047_0221418 3300049581 Bacteria 1748
282 Ga0501048_0159372 3300049582 Bacteria 1597
283 Ga0501067_0046185 3300049583 Bacteria 2417
284 Ga0501069_0197622 3300049585 Bacteria 1165
285 Ga0501070_0010631 3300049586 Bacteria 7779
286 Ga0501070_0044295 3300049586 Bacteria 3703
287 Ga0501071_0040377 3300049587 Bacteria 3339
288 Ga0501071_0222112 3300049587 Bacteria 1422
289 Ga0501072_0252801 3300049588 Bacteria 1403
290 Ga0501072_0440944 3300049588 Bacteria 1031
291 Ga0501074_0021492 3300049590 Bacteria 4684
292 Ga0501075_0344209 3300049591 Bacteria 1136
293 Ga0501075_0410042 3300049591 Bacteria 1033
294 Ga0501076_0016222 3300049592 Bacteria 5643
295 Ga0501076_0330115 3300049592 Bacteria 1251
296 Ga0501079_0052072 3300049741 Bacteria 3161
297 Ga0501079_0348061 3300049741 Bacteria 1161
298 Ga0501080_0018260 3300049742 Bacteria 6491
299 Ga0501080_0233058 3300049742 Bacteria 1682
300 Ga0501081_0198664 3300049743 Bacteria 1454
301 Ga0501035_0195473 3300049822 Bacteria 1737
302 Ga0501044_0034067 3300049823 Bacteria 5345
303 Ga0501045_0092884 3300049824 Bacteria 2232
304 Ga0501045_0390157 3300049824 Bacteria 1036
305 nmdc:mga03683_54001_c1 3300050489 Bacteria 1683
306 nmdc:mga03n38_191878_c1 3300050490 Bacteria 1053
307 nmdc:mga03n38_35937_c1 3300050490 Bacteria 2127
308 nmdc:mga03n38_40433_c1 3300050490 Bacteria 2027
309 nmdc:mga03n38_64228_c1 3300050490 Bacteria 1680
310 nmdc:mga00v17_169664_c1 3300050491 Bacteria 1407
311 nmdc:mga00v17_41248_c1 3300050491 Bacteria 2772
312 nmdc:mga00v17_433428_c1 3300050491 Bacteria 854
313 nmdc:mga0yw44_377_c1 3300050492 Bacteria 15491
314 nmdc:mga0yw44_47619_c1 3300050492 Bacteria 2582
315 nmdc:mga0yw44_95391_c1 3300050492 Bacteria 1887
316 nmdc:mga0yw44_98547_c1 3300050492 Bacteria 1859
317 nmdc:mga06z11_130344_c1 3300050494 Bacteria 1412
318 nmdc:mga04h51_114084_c1 3300050495 Bacteria 1000
319 nmdc:mga07m45_62607_c1 3300050496 Bacteria 2109
320 nmdc:mga07m45_87148_c1 3300050496 Bacteria 1786
321 Ga0495595_0017685 3300053084 Bacteria 3070
322 Ga0495619_0086094 3300053085 Bacteria 2123
323 Ga0500644_0187160 3300053088 Bacteria 850
324 Ga0500554_060119 3300053102 Bacteria 1217
325 Ga0500593_000073 3300053117 Bacteria 37609
326 Ga0500573_0031842 3300053140 Bacteria 3043
327 Ga0501084_0082878 3300054114 Bacteria 2691
328 Ga0590075_007104 3300059424 Bacteria 2656
329 Ga0466962_0160015 3300061719 Bacteria 1094
330 Ga0530510_0225130 3300061734 Bacteria 1395
331 2643853554 2643221567 Bacteria 4163945
332 2643891092 2643221576 Bacteria 5214352
333 2643960148 2643221590 Bacteria 5214697
334 2644035098 2643221604 Bacteria 5014917
335 2644092341 2643221615 Bacteria 5487866
336 2644101228 2643221617 Bacteria 5139111
337 2644119366 2643221620 Bacteria 5134593
338 2644137522 2643221624 Bacteria 4384879
339 2644231732 2643221641 Bacteria 4490190
340 2644322144 2643221657 Bacteria 5490246
341 2738868847 2738541305 Bacteria 4910150
342 2740165451 2739367898 Bacteria 4367674
343 2774395485 2773857762 Bacteria 5971770
344 2808874964 2808606365 Bacteria 4301966
345 2809193682 2808606439 Bacteria 5952208
346 2812330258 2811994874 Bacteria 5367947
347 2812348411 2811994878 Bacteria 5992952
348 2855388531 2855386786 Bacteria 4752232
349 2857484174 2857481737 Bacteria 4761446
350 2891973854 2891968417 Bacteria 5821697
351 2990257676 2990256926 Bacteria 4252839
352 Ga0501068_0131094
353 JGI24744J21845_10002279
354 Ga0006562J51391_1093674
355 Ga0070683_100076907
356 Ga0070680_100114702
357 Ga0070660_100003746
358 Ga0070660_100176143
359 Ga0070692_10003626
360 Ga0070675_100210037
361 Ga0070673_100231253
362 Ga0070673_100612836
363 Ga0070688_100201644
364 Ga0070659_100155240
365 Ga0070659_100231661
366 Ga0070700_100192233
367 Ga0070678_100156990
368 Ga0070662_100349161
369 Ga0068867_100118250
370 Ga0070685_10411530
371 Ga0070679_100014011
372 Ga0070684_100006824
373 Ga0070672_100103746
374 Ga0070693_100081325
375 Ga0070665_100000739
376 Ga0068855_100054138
377 Ga0068857_100024276
378 Ga0070702_100139267
379 Ga0068852_100331489
380 Ga0068864_100023119
381 Ga0068866_10024242
382 Ga0068866_10027873
383 Ga0081539_10102870
384 Ga0075365_10002664
385 Ga0075365_10047923
386 Ga0075365_10076901
387 Ga0075365_10148107
388 Ga0075365_10203117
389 Ga0075365_10226386
390 Ga0075365_10300051
391 Ga0075365_10314605
392 Ga0075365_10350034
393 Ga0075368_10003661
394 Ga0075368_10021323
395 Ga0075363_100004958
396 Ga0075363_100042571
397 Ga0075363_100150718
398 Ga0075363_100177352
399 Ga0075364_10034433
400 Ga0075364_10269725
401 Ga0075367_10024429
402 Ga0075367_10175212
403 Ga0075370_10021724
404 Ga0068865_100118299
405 Ga0111539_10597852
406 Ga0105245_10014237
407 Ga0105245_10305121
408 Ga0105245_10921859
409 Ga0105247_10284873
410 Ga0105243_10002070
411 Ga0105248_10026081
412 Ga0105249_10031015
413 Ga0105249_10127144
414 Ga0105239_10088633
415 Ga0105239_10413804
416 Ga0105246_10153299
417 Ga0157369_10036080
418 Ga0157369_10651400
419 Ga0163162_10096607
420 Ga0157372_10003814
421 Ga0157372_10164907
422 Ga0157375_10396753
423 Ga0157380_10073459
424 Ga0182008_10010983
425 Ga0157377_10017499
426 Ga0157377_10240412
427 Ga0157377_10402601
428 Ga0157379_10025435
429 Ga0206353_10419385
430 Ga0206353_10590081
431 Ga0213876_10104574
432 Ga0207688_10003589
433 Ga0207688_10038193
434 Ga0207647_10008514
435 Ga0207647_10021710
436 Ga0207647_10181401
437 Ga0207643_10005026
438 Ga0207643_10231244
439 Ga0207705_10039898
440 Ga0207660_10012964
441 Ga0207657_10009058
442 Ga0207657_10101491
443 Ga0207657_10177230
444 Ga0207657_10477135
445 Ga0207652_10006742
446 Ga0207650_10139918
447 Ga0207687_10042525
448 Ga0207687_10258662
449 Ga0207690_10086471
450 Ga0207690_10315439
451 Ga0207706_10382882
452 Ga0207709_10086024
453 Ga0207709_10177579
454 Ga0207704_10033112
455 Ga0207691_10053573
456 Ga0207711_10027883
457 Ga0207661_10063283
458 Ga0207661_10238338
459 Ga0207667_10318990
460 Ga0207651_10198867
461 Ga0207712_10015940
462 Ga0207712_10253284
463 Ga0207678_10158305
464 Ga0207678_10437873
465 Ga0207708_10049881
466 Ga0207708_10194359
467 Ga0207648_10000688
468 Ga0207676_10013050
469 Ga0207674_10065247
470 Ga0207675_100071077
471 Ga0207675_100074762
472 Ga0209813_10002703
473 Ga0209813_10096526
474 Ga0207428_10114386
475 Ga0268266_10001664
476 Ga0268264_10000791
477 Ga0307405_10175241
478 Ga0307410_10178254
479 Ga0307410_10269782
480 Ga0307406_10124182
481 Ga0307407_10017052
482 Ga0307407_10120627
483 Ga0307407_10332885
484 Ga0307409_100002153
485 Ga0307409_100006886
486 Ga0307409_100024449
487 Ga0307409_100095848
488 Ga0307409_100343273
489 Ga0307409_100398102
490 Ga0307409_100661887
491 Ga0307416_100037376
492 Ga0307416_100184756
493 Ga0307411_10051951
494 Ga0307411_10140943
495 Ga0307415_100001314
496 Ga0307415_100028224
497 Ga0307415_100183332
498 Ga0395900_0465037
499 Ga0395898_0013187
500 Ga0395898_0272330
501 Ga0395898_0644140
502 Ga0395905_0064184
503 Ga0436364_0241112
504 Ga0395901_0014900
505 Ga0436365_0031318
506 Ga0451797_0788597
507 Ga0451853_1986490
508 Ga0439431_0017813
509 Ga0439448_0142011
510 Ga0466972_0024095
511 Ga0466972_0071777
512 Ga0466965_0112080
513 Ga0466966_0147650
514 Ga0466961_0008483
515 Ga0466961_0057572
516 Ga0466963_0023550
517 Ga0466963_0283400
518 Ga0466964_0009611
519 Ga0466964_0061686
520 Ga0466968_0014527
521 Ga0466968_0128451
522 Ga0466970_0001442
523 Ga0466970_0025071
524 Ga0466970_0070698
525 Ga0466960_0015091
526 Ga0466960_0075428
527 Ga0466960_0077333
528 Ga0466960_0187834
529 Ga0466960_0205266
530 Ga0451576_0244247
531 Ga0466958_0147996
532 Ga0466967_0002113
533 Ga0466967_0014307
534 Ga0466967_0042860
535 Ga0466967_0069503
536 Ga0466967_0080599
537 Ga0466967_0313940
538 Ga0466967_1048783
539 Ga0495603_0070098
540 Ga0495641_0100876
541 Ga0495608_0277599
542 Ga0495658_0079079
543 Ga0495658_0095304
544 Ga0496100_0096460
545 Ga0496101_0034871
546 Ga0496101_0056128
547 Ga0496101_0258496
548 Ga0496101_0426539
549 Ga0496101_0529553
550 Ga0496102_0010935
551 Ga0496102_0015423
552 Ga0496102_0023672
553 Ga0496102_0059275
554 Ga0496102_0345352
555 Ga0496102_0510828
556 Ga0496103_0110926
557 Ga0496103_0143410
558 Ga0496104_0004155
559 Ga0496104_0421883
560 Ga0496105_0276111
561 Ga0496106_0018528
562 Ga0496107_0008649
563 Ga0496107_0312288
564 Ga0496108_0003504
565 Ga0496108_0062105
566 Ga0496108_0275295
567 Ga0496108_0319157
568 Ga0496109_0070405
569 Ga0496109_0093484
570 Ga0496109_0130166
571 Ga0496109_0158920
572 Ga0496109_0326068
573 Ga0496109_0356450
574 Ga0496109_0365046
575 Ga0496110_0034716
576 Ga0496110_0059820
577 Ga0496110_0315029
578 Ga0496110_0383201
579 Ga0496110_0517468
580 Ga0496110_0534791
581 Ga0496110_0645082
582 Ga0496111_0167559
583 Ga0496111_0290536
584 Ga0496113_0342556
585 Ga0496113_0354370
586 Ga0496114_0013101
587 Ga0496114_0021186
588 Ga0496114_0047456
589 Ga0496114_0051864
590 Ga0496114_0069120
591 Ga0496114_0087936
592 Ga0496114_0271427
593 Ga0496114_0391931
594 Ga0496114_0479138
595 Ga0496115_0014871
596 Ga0496115_0543341
597 Ga0501031_0040178
598 Ga0501031_0279769
599 Ga0501032_0007036
600 Ga0501032_0039168
601 Ga0501032_0074449
602 Ga0501033_0002822
603 Ga0501034_0006103
604 Ga0501034_0042466
605 Ga0501034_0281974
606 Ga0501036_0022751
607 Ga0501036_0032944
608 Ga0501036_0178744
609 Ga0501037_0057358
610 Ga0501037_0232041
611 Ga0501037_0408364
612 Ga0501038_0010593
613 Ga0501038_0045704
614 Ga0501038_0216118
615 Ga0501039_0019622
616 Ga0501039_0033459
617 Ga0501039_0057493
618 Ga0501039_0065928
619 Ga0501040_0106234
620 Ga0501040_0154748
621 Ga0501041_0122309
622 Ga0501041_0347568
623 Ga0501042_0003805
624 Ga0501042_0147371
625 Ga0501042_0231201
626 Ga0501042_0269967
627 Ga0501043_0017927
628 Ga0501046_0000920
629 Ga0501046_0005972
630 Ga0501046_0033810
631 Ga0501047_0044847
632 Ga0501047_0221418
633 Ga0501048_0159372
634 Ga0501067_0046185
635 Ga0501069_0197622
636 Ga0501070_0010631
637 Ga0501070_0044295
638 Ga0501071_0040377
639 Ga0501071_0222112
640 Ga0501072_0252801
641 Ga0501072_0440944
642 Ga0501074_0021492
643 Ga0501075_0344209
644 Ga0501075_0410042
645 Ga0501076_0016222
646 Ga0501076_0330115
647 Ga0501079_0052072
648 Ga0501079_0348061
649 Ga0501080_0018260
650 Ga0501080_0233058
651 Ga0501081_0198664
652 Ga0501035_0195473
653 Ga0501044_0034067
654 Ga0501045_0092884
655 Ga0501045_0390157
656 nmdc:mga03683_54001_c1
657 nmdc:mga03n38_191878_c1
658 nmdc:mga03n38_35937_c1
659 nmdc:mga03n38_40433_c1
660 nmdc:mga03n38_64228_c1
661 nmdc:mga00v17_169664_c1
662 nmdc:mga00v17_41248_c1
663 nmdc:mga00v17_433428_c1
664 nmdc:mga0yw44_377_c1
665 nmdc:mga0yw44_47619_c1
666 nmdc:mga0yw44_95391_c1
667 nmdc:mga0yw44_98547_c1
668 nmdc:mga06z11_130344_c1
669 nmdc:mga04h51_114084_c1
670 nmdc:mga07m45_62607_c1
671 nmdc:mga07m45_87148_c1
672 Ga0495595_0017685
673 Ga0495619_0086094
674 Ga0500644_0187160
675 Ga0500554_060119
676 Ga0500593_000073
677 Ga0500573_0031842
678 Ga0501084_0082878
679 Ga0590075_007104
680 Ga0466962_0160015
681 Ga0530510_0225130
682 2643853554
683 2643891092
684 2643960148
685 2644035098
686 2644092341
687 2644101228
688 2644119366
689 2644137522
690 2644231732
691 2644322144
692 2738868847
693 2740165451
694 2774395485
695 2808874964
696 2809193682
697 2812330258
698 2812348411
699 2855388531
700 2857484174
701 2891973854
702 2990257676

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

40

288

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5zhz-assembly1.cif.gz_A crystal structure of the apurinic/apyrimidinic endonuclease iv from mycobacterium tuberculosis 0.867 4 233
5zhz-assembly1.cif.gz_A crystal structure of the apurinic/apyrimidinic endonuclease iv from mycobacterium tuberculosis 0.8495 4 233
2nq9-assembly1.cif.gz_A high resolution crystal structure of escherichia coli endonuclease iv (endo iv) y72a mutant bound to damaged dna 0.8445 3 234
1qum-assembly1.cif.gz_A crystal structure of escherichia coli endonuclease iv in complex with damaged dna 0.8438 3 234
2nq9-assembly1.cif.gz_A high resolution crystal structure of escherichia coli endonuclease iv (endo iv) y72a mutant bound to damaged dna 0.8347 3 234
ID Description Score Start End Superfamily
af_P9WQ13_1_251_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8688 4 233 3.20.20.150
af_P9WQ13_1_251_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8514 4 233 3.20.20.150
1qumA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8438 3 234 3.20.20.150
1qumA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.834 3 234 3.20.20.150
af_A0A2R8Q599_47_340_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8281 1 234 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A6I2VZU4-F1-model_v4 Deoxyribonuclease IV (EC 3.1.21.2) 0.9563 4 174 GO:0003677
GO:0003906
GO:0006284
GO:0008081
GO:0008270
GO:0008833
AF-A0A5B8C5R6-F1-model_v4 Deoxyribonuclease IV (EC 3.1.21.2) 0.9499 2 234 GO:0003677
GO:0003906
GO:0006284
GO:0008081
GO:0008270
GO:0008833
AF-A0A1B1NC42-F1-model_v4 Endonuclease IV (EC 3.1.21.2) 0.9468 2 234 GO:0003677
GO:0003906
GO:0006284
GO:0008081
GO:0008270
GO:0008833
AF-F3P213-F1-model_v4 deleted 0.9454 1 234
AF-A0A7V9F6D1-F1-model_v4 Deoxyribonuclease IV 0.9452 1 105

Map